Chy6G122370 (gene) Cucumber (hystrix) v1

Overview


Name	Chy6G122370
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	60S ribosomal protein L21-1
Location	chrH06: 19802097 .. 19802613 (+)
RNA-Seq Expression	Chy6G122370
Synteny	Chy6G122370

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCTCATAAATTTTACCACGGTTGCACAAGTTGCGTATGGAATGTTACAAAGCGTGCTATCTGCGTCGAGATCGACAAGCAGGTTCATGATTCTTTTTTAAGATCTGTTGTAGTTTTTAGAATGTATGTGAATATGGTGATTTAGGGTAATGGATTGTGTTTGATTTTTATAGAATCTTAATTAGTTTTTGGACTATGTTTTTCTTATTAAACTTTGTTAGTTTGATGGGTTTTGGAATCTGATGAGAGAAAGTTCCATTATGATTTGCACTCTATTTTTCTTATTAAACTTGTGATGTTGAGAATGAATTTTGCAGGTCGGGAACAAAATTATTAAGAAGAGAATTCATGTTGGAGTCGAGCACGTGCAGCCTTCTCGATGCACCGAGGAATTTGGCTTAAGGAAGGTGAAGAACGACGTGCCGAAGGATGAAGCCAAGGCCAAAGGCACAATCATTTGCACCAAGAGCAACCAGAAGGCCCCAAACCAGGGTTCATGGTTGAAGGTGTTTTAA

mRNA sequence

ATGCCTCATAAATTTTACCACGGTTGCACAAGTTGCGTATGGAATGTTACAAAGCGTGCTATCTGCGTCGAGATCGACAAGCAGGTCGGGAACAAAATTATTAAGAAGAGAATTCATGTTGGAGTCGAGCACGTGCAGCCTTCTCGATGCACCGAGGAATTTGGCTTAAGGAAGGTGAAGAACGACGTGCCGAAGGATGAAGCCAAGGCCAAAGGCACAATCATTTGCACCAAGAGCAACCAGAAGGCCCCAAACCAGGGTTCATGGTTGAAGGTGTTTTAA

Coding sequence (CDS)

ATGCCTCATAAATTTTACCACGGTTGCACAAGTTGCGTATGGAATGTTACAAAGCGTGCTATCTGCGTCGAGATCGACAAGCAGGTCGGGAACAAAATTATTAAGAAGAGAATTCATGTTGGAGTCGAGCACGTGCAGCCTTCTCGATGCACCGAGGAATTTGGCTTAAGGAAGGTGAAGAACGACGTGCCGAAGGATGAAGCCAAGGCCAAAGGCACAATCATTTGCACCAAGAGCAACCAGAAGGCCCCAAACCAGGGTTCATGGTTGAAGGTGTTTTAA

Protein sequence

MPHKFYHGCTSCVWNVTKRAICVEIDKQVGNKIIKKRIHVGVEHVQPSRCTEEFGLRKVKNDVPKDEAKAKGTIICTKSNQKAPNQGSWLKVF*

Homology

[Close]

BLAST of Chy6G122370 vs. ExPASy Swiss-Prot
Match: Q9FDZ9 (60S ribosomal protein L21-2 OS=Arabidopsis thaliana OX=3702 GN=RPL21E PE=2 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 3.4e-27
Identity = 57/87 (65.52%), Postives = 67/87 (77.01%), Query Frame = 0


Query: 1   MPHKFYHGCTSCVWNVTKRAICVEIDKQVGNKIIKKRIHVGVEHVQPSRCTEEFGLRKVK 60
           MPHKFYHG T  +WNVTKRA+ VE++KQ+GN+II+KRIHV VEHVQ SRC EEF LRK +
Sbjct: 52  MPHKFYHGRTGRIWNVTKRAVGVEVNKQIGNRIIRKRIHVRVEHVQQSRCAEEFKLRKKQ 111

Query: 61  NDVPKDEAKAKGTIICTKSNQKAPNQG 88
           NDV K +AKA+G  I TK   K P  G
Sbjct: 112 NDVLKADAKARGETISTKRQPKGPKPG 138

[Close]

BLAST of Chy6G122370 vs. ExPASy Swiss-Prot
Match: Q43291 (60S ribosomal protein L21-1 OS=Arabidopsis thaliana OX=3702 GN=RPL21A PE=2 SV=2)

HSP 1 Score: 119.4 bits (298), Expect = 2.2e-26
Identity = 57/87 (65.52%), Postives = 64/87 (73.56%), Query Frame = 0


Query: 1   MPHKFYHGCTSCVWNVTKRAICVEIDKQVGNKIIKKRIHVGVEHVQPSRCTEEFGLRKVK 60
           MPHKFYHG T  +WNVTKRA+ VE++KQ+GN+II+KRIHV VEHVQ SRC EEF LRK K
Sbjct: 52  MPHKFYHGRTGRIWNVTKRAVGVEVNKQIGNRIIRKRIHVRVEHVQQSRCAEEFKLRKKK 111

Query: 61  NDVPKDEAKAKGTIICTKSNQKAPNQG 88
           ND  K  AKA G  I TK   K P  G
Sbjct: 112 NDELKAAAKANGETISTKRQPKGPKPG 138

[Close]

BLAST of Chy6G122370 vs. ExPASy Swiss-Prot
Match: O82574 (60S ribosomal protein L21 OS=Cyanophora paradoxa OX=2762 GN=RPL21 PE=2 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 6.0e-16
Identity = 46/92 (50.00%), Postives = 60/92 (65.22%), Query Frame = 0


Query: 1   MPHKFYHGCTSCVWNVTKRAICVEIDKQVGNKIIKKRIHVGVEHVQPSRCTEEFGLRKVK 60
           MP K+YHG T  VWNVTKRAI VEI+K+V ++IIKKRIHV ++HV+ S C + F  R  +
Sbjct: 52  MPFKYYHGRTGIVWNVTKRAIGVEINKRVRHRIIKKRIHVRIDHVKKSSCRDSFLKRVKE 111

Query: 61  NDVPKDEAK-AKGTIICTKSNQKAPNQGSWLK 92
           ND  K +A  AK  +  TK     P  G+ +K
Sbjct: 112 NDKIKHDAHVAKLPVPSTKRLPVLPKAGAIIK 143

[Close]

BLAST of Chy6G122370 vs. ExPASy Swiss-Prot
Match: Q54X53 (60S ribosomal protein L21 OS=Dictyostelium discoideum OX=44689 GN=rpl21 PE=3 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 3.3e-14
Identity = 42/87 (48.28%), Postives = 51/87 (58.62%), Query Frame = 0


Query: 1   MPHKFYHGCTSCVWNVTKRAICVEIDKQVGNKIIKKRIHVGVEHVQPSRCTEEFGLRKVK 60
           MPHKFYHG T  VWNVT RA+ V I+K+VG +II K+IHV  EHV+PS        R  +
Sbjct: 52  MPHKFYHGRTGRVWNVTPRAVGVIINKRVGPRIIAKKIHVRTEHVKPSNSMAAHLKRIQE 111

Query: 61  NDVPKDEAKAKGTIICTKSNQKAPNQG 88
           N     EAK  G  +  + N  AP  G
Sbjct: 112 NKKAVVEAKKAGKWVDVRRNPAAPKDG 138

[Close]

BLAST of Chy6G122370 vs. ExPASy Swiss-Prot
Match: Q6QN05 (60S ribosomal protein L21 OS=Chinchilla lanigera OX=34839 GN=RPL21 PE=2 SV=3)

HSP 1 Score: 78.6 bits (192), Expect = 4.3e-14
Identity = 38/91 (41.76%), Postives = 57/91 (62.64%), Query Frame = 0


Query: 1   MPHKFYHGCTSCVWNVTKRAICVEIDKQVGNKIIKKRIHVGVEHVQPSRCTEEFGLRKVK 60
           MPHK YHG T  V+NVT+ A+ + ++KQV  KI+ KRI+V +EH++ S+  + F  R  +
Sbjct: 52  MPHKCYHGKTGRVYNVTQHAVGIVVNKQVKGKILAKRINVRIEHIKHSKSRDSFLKRVKE 111

Query: 61  NDVPKDEAKAKGTIICTKSNQKAPNQGSWLK 92
           ND  K EAK KGT +  K     P +  +++
Sbjct: 112 NDQKKKEAKEKGTWVQLKRQPAPPREAHFVR 142

[Close]

BLAST of Chy6G122370 vs. ExPASy TrEMBL
Match: A0A0A0LEZ0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G797610 PE=3 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 5.8e-30
Identity = 68/87 (78.16%), Postives = 72/87 (82.76%), Query Frame = 0


Query: 1   MPHKFYHGCTSCVWNVTKRAICVEIDKQVGNKIIKKRIHVGVEHVQPSRCTEEFGLRKVK 60
           MPHKFYHG T  VWNVTKRAI VEI+KQVGN+IIKKRIHV VEHVQPSRCTEEF LRKVK
Sbjct: 52  MPHKFYHGRTGQVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCTEEFRLRKVK 111

Query: 61  NDVPKDEAKAKGTIICTKSNQKAPNQG 88
           ND  K EAKAKGT+ICTK   + P  G
Sbjct: 112 NDELKAEAKAKGTVICTKRQPEGPKPG 138

[Close]

BLAST of Chy6G122370 vs. ExPASy TrEMBL
Match: A0A5D3DP20 (60S ribosomal protein L21-1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G005180 PE=3 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 2.2e-29
Identity = 67/87 (77.01%), Postives = 71/87 (81.61%), Query Frame = 0


Query: 1   MPHKFYHGCTSCVWNVTKRAICVEIDKQVGNKIIKKRIHVGVEHVQPSRCTEEFGLRKVK 60
           MPHKFYHG T  VWNVTKRAI VEI+KQVGN+IIKKRIHV VEHVQPSRCTEEF LRKVK
Sbjct: 52  MPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCTEEFRLRKVK 111

Query: 61  NDVPKDEAKAKGTIICTKSNQKAPNQG 88
           ND  K EAKAKG +ICTK   + P  G
Sbjct: 112 NDELKAEAKAKGVVICTKRQPEGPKPG 138

[Close]

BLAST of Chy6G122370 vs. ExPASy TrEMBL
Match: A0A1S3B7V0 (60S ribosomal protein L21-1 OS=Cucumis melo OX=3656 GN=LOC103486741 PE=3 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 2.2e-29
Identity = 67/87 (77.01%), Postives = 71/87 (81.61%), Query Frame = 0


Query: 1   MPHKFYHGCTSCVWNVTKRAICVEIDKQVGNKIIKKRIHVGVEHVQPSRCTEEFGLRKVK 60
           MPHKFYHG T  VWNVTKRAI VEI+KQVGN+IIKKRIHV VEHVQPSRCTEEF LRKVK
Sbjct: 52  MPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCTEEFRLRKVK 111

Query: 61  NDVPKDEAKAKGTIICTKSNQKAPNQG 88
           ND  K EAKAKG +ICTK   + P  G
Sbjct: 112 NDELKAEAKAKGVVICTKRQPEGPKPG 138

[Close]

BLAST of Chy6G122370 vs. ExPASy TrEMBL
Match: A0A314Y5A8 (60S ribosomal protein L21-1 OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_39248 PE=3 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 2.9e-29
Identity = 66/87 (75.86%), Postives = 71/87 (81.61%), Query Frame = 0


Query: 1   MPHKFYHGCTSCVWNVTKRAICVEIDKQVGNKIIKKRIHVGVEHVQPSRCTEEFGLRKVK 60
           MPHKFYHG T  VWNVTKRAI VEI+KQVGN+II+KRIHV VEHVQPSRCTEEF LRK+K
Sbjct: 52  MPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQPSRCTEEFRLRKIK 111

Query: 61  NDVPKDEAKAKGTIICTKSNQKAPNQG 88
           ND  K EAKAKG +ICTK   K P  G
Sbjct: 112 NDQLKAEAKAKGEVICTKRQPKGPKPG 138

[Close]

BLAST of Chy6G122370 vs. ExPASy TrEMBL
Match: A0A6J1F7A4 (60S ribosomal protein L21-1-like OS=Cucurbita moschata OX=3662 GN=LOC111441507 PE=3 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 6.4e-29
Identity = 66/87 (75.86%), Postives = 71/87 (81.61%), Query Frame = 0


Query: 1   MPHKFYHGCTSCVWNVTKRAICVEIDKQVGNKIIKKRIHVGVEHVQPSRCTEEFGLRKVK 60
           MPHKFYHG T  VWNVTKRAI VEI+KQVGN+II+KRIHV VEHVQPSRCTEEF LRKVK
Sbjct: 52  MPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQPSRCTEEFRLRKVK 111

Query: 61  NDVPKDEAKAKGTIICTKSNQKAPNQG 88
           ND  K EAKAKG +ICTK   + P  G
Sbjct: 112 NDQLKAEAKAKGEVICTKRQPEGPKPG 138

[Close]

BLAST of Chy6G122370 vs. NCBI nr
Match: XP_004140433.3 (60S ribosomal protein L21-1 [Cucumis sativus] >XP_031737611.1 60S ribosomal protein L21-1-like [Cucumis sativus])

HSP 1 Score: 139 bits (349), Expect = 1.39e-39
Identity = 67/87 (77.01%), Postives = 72/87 (82.76%), Query Frame = 0


Query: 1   MPHKFYHGCTSCVWNVTKRAICVEIDKQVGNKIIKKRIHVGVEHVQPSRCTEEFGLRKVK 60
           MPHKFYHG T  VWNVTKRAI VEI+KQVGN+IIKKRIHV VEH+QPSRCTEEF LRKVK
Sbjct: 52  MPHKFYHGRTGQVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHMQPSRCTEEFRLRKVK 111

Query: 61  NDVPKDEAKAKGTIICTKSNQKAPNQG 87
           ND  K EAKAKGT+ICTK   + P  G
Sbjct: 112 NDELKAEAKAKGTVICTKRQPEGPKPG 138

[Close]

BLAST of Chy6G122370 vs. NCBI nr
Match: XP_008443016.1 (PREDICTED: 60S ribosomal protein L21-1 [Cucumis melo] >KAA0043756.1 60S ribosomal protein L21-1 [Cucumis melo var. makuwa] >TYK25377.1 60S ribosomal protein L21-1 [Cucumis melo var. makuwa])

HSP 1 Score: 138 bits (347), Expect = 2.80e-39
Identity = 67/87 (77.01%), Postives = 71/87 (81.61%), Query Frame = 0


Query: 1   MPHKFYHGCTSCVWNVTKRAICVEIDKQVGNKIIKKRIHVGVEHVQPSRCTEEFGLRKVK 60
           MPHKFYHG T  VWNVTKRAI VEI+KQVGN+IIKKRIHV VEHVQPSRCTEEF LRKVK
Sbjct: 52  MPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCTEEFRLRKVK 111

Query: 61  NDVPKDEAKAKGTIICTKSNQKAPNQG 87
           ND  K EAKAKG +ICTK   + P  G
Sbjct: 112 NDELKAEAKAKGVVICTKRQPEGPKPG 138

[Close]

BLAST of Chy6G122370 vs. NCBI nr
Match: XP_031739289.1 (60S ribosomal protein L21-1 [Cucumis sativus] >XP_031739303.1 60S ribosomal protein L21-1 [Cucumis sativus] >XP_031745254.1 60S ribosomal protein L21-1 [Cucumis sativus] >KAE8651128.1 hypothetical protein Csa_001407 [Cucumis sativus] >KGN43674.2 hypothetical protein Csa_017109 [Cucumis sativus])

HSP 1 Score: 138 bits (347), Expect = 2.80e-39
Identity = 67/87 (77.01%), Postives = 71/87 (81.61%), Query Frame = 0


Query: 1   MPHKFYHGCTSCVWNVTKRAICVEIDKQVGNKIIKKRIHVGVEHVQPSRCTEEFGLRKVK 60
           MPHKFYHG T  VWNVTKRAI VEI+KQVGN+IIKKRIHV VEHVQPSRCTEEF LRKVK
Sbjct: 52  MPHKFYHGRTGQVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCTEEFRLRKVK 111

Query: 61  NDVPKDEAKAKGTIICTKSNQKAPNQG 87
           ND  K EAKAKG +ICTK   + P  G
Sbjct: 112 NDELKAEAKAKGAVICTKRQPEGPKPG 138

[Close]

BLAST of Chy6G122370 vs. NCBI nr
Match: PQQ01453.1 (60S ribosomal protein L21-1 [Prunus yedoensis var. nudiflora])

HSP 1 Score: 137 bits (346), Expect = 3.97e-39
Identity = 66/87 (75.86%), Postives = 71/87 (81.61%), Query Frame = 0


Query: 1   MPHKFYHGCTSCVWNVTKRAICVEIDKQVGNKIIKKRIHVGVEHVQPSRCTEEFGLRKVK 60
           MPHKFYHG T  VWNVTKRAI VEI+KQVGN+II+KRIHV VEHVQPSRCTEEF LRK+K
Sbjct: 52  MPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQPSRCTEEFRLRKIK 111

Query: 61  NDVPKDEAKAKGTIICTKSNQKAPNQG 87
           ND  K EAKAKG +ICTK   K P  G
Sbjct: 112 NDQLKAEAKAKGEVICTKRQPKGPKPG 138

[Close]

BLAST of Chy6G122370 vs. NCBI nr
Match: XP_038906379.1 (60S ribosomal protein L21-1 [Benincasa hispida])

HSP 1 Score: 137 bits (346), Expect = 3.97e-39
Identity = 67/87 (77.01%), Postives = 71/87 (81.61%), Query Frame = 0


Query: 1   MPHKFYHGCTSCVWNVTKRAICVEIDKQVGNKIIKKRIHVGVEHVQPSRCTEEFGLRKVK 60
           MPHKFYHG T  VWNVTKRAI VEI+KQVGN+IIKKRIHV VEHVQPSRCTEEF LRKVK
Sbjct: 52  MPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCTEEFRLRKVK 111

Query: 61  NDVPKDEAKAKGTIICTKSNQKAPNQG 87
           ND  K EAKAKG +ICTK   + P  G
Sbjct: 112 NDELKAEAKAKGEVICTKRQPEGPKPG 138

[Close]

BLAST of Chy6G122370 vs. TAIR 10
Match: AT1G57660.1 (Translation protein SH3-like family protein )

HSP 1 Score: 122.1 bits (305), Expect = 2.4e-28
Identity = 57/87 (65.52%), Postives = 67/87 (77.01%), Query Frame = 0


Query: 1   MPHKFYHGCTSCVWNVTKRAICVEIDKQVGNKIIKKRIHVGVEHVQPSRCTEEFGLRKVK 60
           MPHKFYHG T  +WNVTKRA+ VE++KQ+GN+II+KRIHV VEHVQ SRC EEF LRK +
Sbjct: 52  MPHKFYHGRTGRIWNVTKRAVGVEVNKQIGNRIIRKRIHVRVEHVQQSRCAEEFKLRKKQ 111

Query: 61  NDVPKDEAKAKGTIICTKSNQKAPNQG 88
           NDV K +AKA+G  I TK   K P  G
Sbjct: 112 NDVLKADAKARGETISTKRQPKGPKPG 138

[Close]

BLAST of Chy6G122370 vs. TAIR 10
Match: AT1G57860.1 (Translation protein SH3-like family protein )

HSP 1 Score: 122.1 bits (305), Expect = 2.4e-28
Identity = 57/87 (65.52%), Postives = 67/87 (77.01%), Query Frame = 0


Query: 1   MPHKFYHGCTSCVWNVTKRAICVEIDKQVGNKIIKKRIHVGVEHVQPSRCTEEFGLRKVK 60
           MPHKFYHG T  +WNVTKRA+ VE++KQ+GN+II+KRIHV VEHVQ SRC EEF LRK +
Sbjct: 52  MPHKFYHGRTGRIWNVTKRAVGVEVNKQIGNRIIRKRIHVRVEHVQQSRCAEEFKLRKKQ 111

Query: 61  NDVPKDEAKAKGTIICTKSNQKAPNQG 88
           NDV K +AKA+G  I TK   K P  G
Sbjct: 112 NDVLKADAKARGETISTKRQPKGPKPG 138

[Close]

BLAST of Chy6G122370 vs. TAIR 10
Match: AT1G09590.1 (Translation protein SH3-like family protein )

HSP 1 Score: 119.4 bits (298), Expect = 1.6e-27
Identity = 57/87 (65.52%), Postives = 64/87 (73.56%), Query Frame = 0


Query: 1   MPHKFYHGCTSCVWNVTKRAICVEIDKQVGNKIIKKRIHVGVEHVQPSRCTEEFGLRKVK 60
           MPHKFYHG T  +WNVTKRA+ VE++KQ+GN+II+KRIHV VEHVQ SRC EEF LRK K
Sbjct: 52  MPHKFYHGRTGRIWNVTKRAVGVEVNKQIGNRIIRKRIHVRVEHVQQSRCAEEFKLRKKK 111

Query: 61  NDVPKDEAKAKGTIICTKSNQKAPNQG 88
           ND  K  AKA G  I TK   K P  G
Sbjct: 112 NDELKAAAKANGETISTKRQPKGPKPG 138

[Close]

BLAST of Chy6G122370 vs. TAIR 10
Match: AT1G09690.1 (Translation protein SH3-like family protein )

HSP 1 Score: 119.4 bits (298), Expect = 1.6e-27
Identity = 57/87 (65.52%), Postives = 64/87 (73.56%), Query Frame = 0


Query: 1   MPHKFYHGCTSCVWNVTKRAICVEIDKQVGNKIIKKRIHVGVEHVQPSRCTEEFGLRKVK 60
           MPHKFYHG T  +WNVTKRA+ VE++KQ+GN+II+KRIHV VEHVQ SRC EEF LRK K
Sbjct: 52  MPHKFYHGRTGRIWNVTKRAVGVEVNKQIGNRIIRKRIHVRVEHVQQSRCAEEFKLRKKK 111

Query: 61  NDVPKDEAKAKGTIICTKSNQKAPNQG 88
           ND  K  AKA G  I TK   K P  G
Sbjct: 112 NDELKAAAKANGETISTKRQPKGPKPG 138

The following BLAST results are available for this feature:

BLAST of Chy6G122370 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FDZ9	3.4e-27	65.52	60S ribosomal protein L21-2 OS=Arabidopsis thaliana OX=3702 GN=RPL21E PE=2 SV=1	[more]
Q43291	2.2e-26	65.52	60S ribosomal protein L21-1 OS=Arabidopsis thaliana OX=3702 GN=RPL21A PE=2 SV=2	[more]
O82574	6.0e-16	50.00	60S ribosomal protein L21 OS=Cyanophora paradoxa OX=2762 GN=RPL21 PE=2 SV=1	[more]
Q54X53	3.3e-14	48.28	60S ribosomal protein L21 OS=Dictyostelium discoideum OX=44689 GN=rpl21 PE=3 SV=...	[more]
Q6QN05	4.3e-14	41.76	60S ribosomal protein L21 OS=Chinchilla lanigera OX=34839 GN=RPL21 PE=2 SV=3	[more]

BLAST of Chy6G122370 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LEZ0	5.8e-30	78.16	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G797610 PE=3 SV=1	[more]
A0A5D3DP20	2.2e-29	77.01	60S ribosomal protein L21-1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A1S3B7V0	2.2e-29	77.01	60S ribosomal protein L21-1 OS=Cucumis melo OX=3656 GN=LOC103486741 PE=3 SV=1	[more]
A0A314Y5A8	2.9e-29	75.86	60S ribosomal protein L21-1 OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn...	[more]
A0A6J1F7A4	6.4e-29	75.86	60S ribosomal protein L21-1-like OS=Cucurbita moschata OX=3662 GN=LOC111441507 P...	[more]

BLAST of Chy6G122370 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004140433.3	1.39e-39	77.01	60S ribosomal protein L21-1 [Cucumis sativus] >XP_031737611.1 60S ribosomal prot...	[more]
XP_008443016.1	2.80e-39	77.01	PREDICTED: 60S ribosomal protein L21-1 [Cucumis melo] >KAA0043756.1 60S ribosoma...	[more]
XP_031739289.1	2.80e-39	77.01	60S ribosomal protein L21-1 [Cucumis sativus] >XP_031739303.1 60S ribosomal prot...	[more]
PQQ01453.1	3.97e-39	75.86	60S ribosomal protein L21-1 [Prunus yedoensis var. nudiflora]	[more]
XP_038906379.1	3.97e-39	77.01	60S ribosomal protein L21-1 [Benincasa hispida]	[more]

BLAST of Chy6G122370 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G57660.1	2.4e-28	65.52	Translation protein SH3-like family protein	[more]
AT1G57860.1	2.4e-28	65.52	Translation protein SH3-like family protein	[more]
AT1G09590.1	1.6e-27	65.52	Translation protein SH3-like family protein	[more]
AT1G09690.1	1.6e-27	65.52	Translation protein SH3-like family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001147	Ribosomal protein L21e	PFAM	PF01157	Ribosomal_L21e	coord: 1..50 e-value: 2.8E-17 score: 62.4
IPR001147	Ribosomal protein L21e	PANTHER	PTHR20981	60S RIBOSOMAL PROTEIN L21	coord: 1..87
None	No IPR available	GENE3D	6.10.250.3260		coord: 48..92 e-value: 3.9E-9 score: 38.4
None	No IPR available	PANTHER	PTHR20981:SF21	60S RIBOSOMAL PROTEIN L21	coord: 1..87
IPR036948	Ribosomal protein L21 superfamily	GENE3D	2.30.30.70	Ribosomal protein L21	coord: 1..46 e-value: 2.7E-16 score: 61.4
IPR008991	Translation protein SH3-like domain superfamily	SUPERFAMILY	50104	Translation proteins SH3-like domain	coord: 1..48

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy6G122370.1	Chy6G122370.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003735	structural constituent of ribosome