Chy6G122310 (gene) Cucumber (hystrix) v1

Overview


Name	Chy6G122310
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Vicilin-like seed storage protein
Location	chrH06: 19688844 .. 19691819 (+)
RNA-Seq Expression	Chy6G122310
Synteny	Chy6G122310

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATCCGTTGCCTATTGCGTCTCGCGGCTTTTGAGTTCGATTCTCATTTCCCATCTTTCTTTCTTCCTTGTTCGAACCTCGCTTCAAAATCATTCTCTAACCCGCAACTAAAATGGCGAGAGATCGAAATGGCGAGCTATCTACTAAGAGAGGAAGTTCCGACAACGACGAACCCGGCGAACGAGAAGGAGAAGACAACTGTGCTCCTTCAAAGAGAATCTCCGGTAAGGATTCCGAGAAAGATCGTGAAAATTCCGGTTCTGATGCAGACGAAGGACGAAAACGCATCAAATCAAGAAGAAAATCGCGGGAAACTTCGGATTCCGATGAGAAACATGGCAAGAGACGTGGGAGGAGTTCGAGAAGAAAGGGGAAATCCCGTAGACGATACAGTAGTAGTGAGGAGGATTCTGATTCCGAAAATACTGAGTCTGATAGCTCGATGTATGATTCGGATTCGGGGCATTCGGACTCTGAATCAGCTTCAAGTAGTTCGGGTTCGGAAGAGGATAGCGAGAGCGAGGGGGAGAGGAGGAAGAGGAAGAGGAAGGAAAGGAGGAGGAGAAGAGAGAAAGAGAGAGAGCGGAAGAGGAGGAGAAAAGAGAAGGAGAAGAAGAGGAGGAAAAAAGAGAGAGAGGAAGAGAAACGAAGGAAGGAGAAGAAAAAGAAGGAGAAGAAGGAACGAGGAAAGAAAGGGGCAGTGACCAATTCTTGGGGAAAGTACGGGATTATCAAAGAAACTGATATGTGGTATGTCACTAATGAATTCCATGGATGTTTCTGTTTGCTTACTGCACAAATTTTGGTTTATATCTTCCTTTTTGCTTAACTTCTTGGCTTTGGTGAATCTCTGTGCATGTAATGTAATCAACTGAACCTGATTTTTTGTTATACTGTGTAAGAGTTTCTATACTGCTTCTTGGTTTCTTCAATTTGATCTTACCAACTTTTTTTTTAGGAACAAGCGACCAGAGTTCACCGCATGGTTGGCTGAAATAAAAAAGGTAAACTGATTTATGCCCAATTATATTTCCATTAGCTCAATAATGCTAATTTATGACATTTGTAAGCTGTGCCATTATCTTGCTGTTCTGTTGCAACTACAAAGTGTGTGGAATAGTTTTATGCAATACTTGAATGTCCTTCATTTTTAAGGCACTTCATGCTTTCATTACGATGGAGCCAACCTCGGTGTTTCATCTCTTCAGTGTATGGATTTGAATTAACTAGAACCAAGTTAATTTTTCATGGTGCTTCAACGTCTAGGAATGGAAGAAAACTTCCAATACTCAATCCAGTTAACCCATTTTTGCTGTTTTGGGGACTTAAATTACTTTAAGTAGTGTGCCTATGTTTTGGATTGAATATAAAAGTTTACTAAGGTGGCAAGGTGGGAAGAATTAGGATCCGACTGCTTTCATAGTTGTGGTATTTTTGCTAATCATATTATTTTGATGTTGCATTGCTCTTAGGTTAACTTGGAAAGCCTAGCTAACTGGGAAGAGAAGCAAATGTTTAAGGAGTAAGCTCCTTACAGTCATTACTGCTGAATTTTGAAGATAGCTGTTGTATTAACTATTCTAATTCTCACTTAATCTATTTGTCAAAACTTATTGAAACTGTAAATAACTGCAATCATACTCATCTTGTGATGATTGGTTGTACAGATTCATGGAGGACCATAACACAGCCACTTTTCCGTCCAAAAAGTAAGGTTCTGAGTATCTTTGTTTCTGCGGCTACTATCTTCTTGTTTGAGAATGTTGAAAGAAAGAAATGAATGTAGATTGCTCGACGGAACATTGCTATGGTCAATATTTCTTGTAGTTGCATTTGATACAGTATTTTAAACCCAAGAAAGAATTAACTGAAGCTTTTCTTTGAAGATCAACATCTACTCATGTTGTTAAGTATACTTTCGCTTATTAGACTCCTATTCATTTTGTTTCTTCCAATGTCAATCACTTCCATTTATTTCATGTGATTTCAGGTACTACAATCTTGATGCTTATTACCAGCGTAAAATACAAAAAGATATGAAGAAAGGCCAAAAAAAGGTTGTGGCAGGGGAACGCACTGTGTTTGATGATGAAGAACAGAGGAGGTACTTTCTACTTTTCTTCCTTTTTCGTTACCTGCTGTTCACTTGGAGGATTAAATACACCTCAATTTTTTGAATTTTTGCTCATCCAGTGGTTGAATGTCAATGTTTTATGGTGGAGTCTTAAATTACCGATTCAACCGAATGCTTAAGCTAGTAGCTGAGGGTAATTTAATATATTATCTAACATGGCGCAATACTACTCATTGAGAATTCACAAAGAAATTCTTTATTCAATTTTTCATAAGTATATCAAATCATTCCGATACAAGATCTGAAAAATCAATTACTAATTAACTGATAGACTAATTAACTGATAGACTAATTAAAAATAAACTCAGGAAACAATTACTAAAACTAATTAACCAATTGAAGTGCTAGATTTGAACTACTGTCTTTTCCCTGGACTTAAAATGCGGTCAAAACTATTATCGAATGTTAAAAAATCATAGACGGTCTAGTTGTTCAACAGTCTTGGTTTGGTTAATATTGACACTCTACTTTTCAGGCAAGAACTACTCATTGAACGTGAAAAGCACAAGGAAGAACAAGTGGAAGTCCTAAAGCGCTCTATGCAGACAGGAATGGTCGGTGATTTTACTCTCTGAAAGTAGTTTATATTATCCAACTTTATTGCAAGTTTCTTACTTCCATTTCTCACAGGCACAAGCAATGAAAGAACAAGCTCGACTCAGGGAGGAGATGGCTTATCAATACAAGCTTGGAAACTTTGAGGTAGGCATAAATGTGAACAAAGTTTTCCTGCGGTTTCATTTGGATGTACATTCTCAGGCTGTTCCCAAATTTTTGCTACATTTTATTATAGGCTGCAGCTGCCATTCAACGAAGATTGGACCCAGATGTTGCCCTGTGA

mRNA sequence

ATGATCCGTTGCCTATTGCGTCTCGCGGCTTTTGAGTTCGATTCTCATTTCCCATCTTTCTTTCTTCCTTGTTCGAACCTCGCTTCAAAATCATTCTCTAACCCGCAACTAAAATGGCGAGAGATCGAAATGGCGAGCTATCTACTAAGAGAGGAAGTTCCGACAACGACGAACCCGGCGAACGAGAAGGAGAAGACAACTGTGCTCCTTCAAAGAGAATCTCCGGTAAGGATTCCGAGAAAGATCGTGAAAATTCCGGTTCTGATGCAGACGAAGGACGAAAACGCATCAAATCAAGAAGAAAATCGCGGGAAACTTCGGATTCCGATGAGAAACATGGCAAGAGACGTGGGAGGAGTTCGAGAAGAAAGGGGAAATCCCGTAGACGATACAGTAGTAGTTAACTTGGAAAGCCTAGCTAACTGGGAAGAGAAGCAAATGTTTAAGGAATTCATGGAGGACCATAACACAGCCACTTTTCCGTCCAAAAAGTACTACAATCTTGATGCTTATTACCAGCGTAAAATACAAAAAGATATGAAGAAAGGCCAAAAAAAGGTTGTGGCAGGGGAACGCACTGTGTTTGATGATGAAGAACAGAGGAGGCAAGAACTACTCATTGAACGTGAAAAGCACAAGGAAGAACAAGTGGAAGTCCTAAAGCGCTCTATGCAGACAGGAATGGCACAAGCAATGAAAGAACAAGCTCGACTCAGGGAGGAGATGGCTTATCAATACAAGCTTGGAAACTTTGAGGCTGCAGCTGCCATTCAACGAAGATTGGACCCAGATGTTGCCCTGTGA

Coding sequence (CDS)

ATGATCCGTTGCCTATTGCGTCTCGCGGCTTTTGAGTTCGATTCTCATTTCCCATCTTTCTTTCTTCCTTGTTCGAACCTCGCTTCAAAATCATTCTCTAACCCGCAACTAAAATGGCGAGAGATCGAAATGGCGAGCTATCTACTAAGAGAGGAAGTTCCGACAACGACGAACCCGGCGAACGAGAAGGAGAAGACAACTGTGCTCCTTCAAAGAGAATCTCCGGTAAGGATTCCGAGAAAGATCGTGAAAATTCCGGTTCTGATGCAGACGAAGGACGAAAACGCATCAAATCAAGAAGAAAATCGCGGGAAACTTCGGATTCCGATGAGAAACATGGCAAGAGACGTGGGAGGAGTTCGAGAAGAAAGGGGAAATCCCGTAGACGATACAGTAGTAGTTAACTTGGAAAGCCTAGCTAACTGGGAAGAGAAGCAAATGTTTAAGGAATTCATGGAGGACCATAACACAGCCACTTTTCCGTCCAAAAAGTACTACAATCTTGATGCTTATTACCAGCGTAAAATACAAAAAGATATGAAGAAAGGCCAAAAAAAGGTTGTGGCAGGGGAACGCACTGTGTTTGATGATGAAGAACAGAGGAGGCAAGAACTACTCATTGAACGTGAAAAGCACAAGGAAGAACAAGTGGAAGTCCTAAAGCGCTCTATGCAGACAGGAATGGCACAAGCAATGAAAGAACAAGCTCGACTCAGGGAGGAGATGGCTTATCAATACAAGCTTGGAAACTTTGAGGCTGCAGCTGCCATTCAACGAAGATTGGACCCAGATGTTGCCCTGTGA

Protein sequence

MIRCLLRLAAFEFDSHFPSFFLPCSNLASKSFSNPQLKWREIEMASYLLREEVPTTTNPANEKEKTTVLLQRESPVRIPRKIVKIPVLMQTKDENASNQEENRGKLRIPMRNMARDVGGVREERGNPVDDTVVVNLESLANWEEKQMFKEFMEDHNTATFPSKKYYNLDAYYQRKIQKDMKKGQKKVVAGERTVFDDEEQRRQELLIEREKHKEEQVEVLKRSMQTGMAQAMKEQARLREEMAYQYKLGNFEAAAAIQRRLDPDVAL*

Homology

[Close]

BLAST of Chy6G122310 vs. ExPASy TrEMBL
Match: A0A0A0L2M5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G104880 PE=4 SV=1)

HSP 1 Score: 256.5 bits (654), Expect = 1.2e-64
Identity = 134/136 (98.53%), Postives = 136/136 (100.00%), Query Frame = 0


Query: 132 VVVNLESLANWEEKQMFKEFMEDHNTATFPSKKYYNLDAYYQRKIQKDMKKGQKKVVAGE 191
           ++VNLESLANWEEKQMFKEFMEDHNTATFPSKKYYNLDAYYQRKIQKDMKKGQKKVVAGE
Sbjct: 230 ILVNLESLANWEEKQMFKEFMEDHNTATFPSKKYYNLDAYYQRKIQKDMKKGQKKVVAGE 289

Query: 192 RTVFDDEEQRRQELLIEREKHKEEQVEVLKRSMQTGMAQAMKEQARLREEMAYQYKLGNF 251
           RTVFDDEEQRRQELLIEREKHKEEQVEVLKRSMQTGMAQAMKEQARLREEMAYQYKLGNF
Sbjct: 290 RTVFDDEEQRRQELLIEREKHKEEQVEVLKRSMQTGMAQAMKEQARLREEMAYQYKLGNF 349

Query: 252 EAAAAIQRRLDPDVAL 268
           EAAAAIQRRLDPDVAL
Sbjct: 350 EAAAAIQRRLDPDVAL 365

[Close]

BLAST of Chy6G122310 vs. ExPASy TrEMBL
Match: A0A5A7V1G4 (Vicilin-like seed storage protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold22G005470 PE=4 SV=1)

HSP 1 Score: 251.5 bits (641), Expect = 3.9e-63
Identity = 132/134 (98.51%), Postives = 132/134 (98.51%), Query Frame = 0


Query: 134 VNLESLANWEEKQMFKEFMEDHNTATFPSKKYYNLDAYYQRKIQKDMKKGQKKVVAGERT 193
           VNLESLANWEEKQMFKEFMEDHNTATFPSKKYYNLDAYYQRKIQKDMKKG KKVVAGERT
Sbjct: 133 VNLESLANWEEKQMFKEFMEDHNTATFPSKKYYNLDAYYQRKIQKDMKKGHKKVVAGERT 192

Query: 194 VFDDEEQRRQELLIEREKHKEEQVEVLKRSMQTGMAQAMKEQARLREEMAYQYKLGNFEA 253
           VFDDEEQRRQELLIEREKHKEEQVE LKRSMQTGMAQAMKEQARLREEMAYQYKLGNFEA
Sbjct: 193 VFDDEEQRRQELLIEREKHKEEQVEALKRSMQTGMAQAMKEQARLREEMAYQYKLGNFEA 252

Query: 254 AAAIQRRLDPDVAL 268
           AAAIQRRLDPDVAL
Sbjct: 253 AAAIQRRLDPDVAL 266

[Close]

BLAST of Chy6G122310 vs. ExPASy TrEMBL
Match: A0A5D3BTB2 (Vicilin-like seed storage protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold18G00070 PE=4 SV=1)

HSP 1 Score: 251.5 bits (641), Expect = 3.9e-63
Identity = 132/134 (98.51%), Postives = 132/134 (98.51%), Query Frame = 0


Query: 134 VNLESLANWEEKQMFKEFMEDHNTATFPSKKYYNLDAYYQRKIQKDMKKGQKKVVAGERT 193
           VNLESLANWEEKQMFKEFMEDHNTATFPSKKYYNLDAYYQRKIQKDMKKG KKVVAGERT
Sbjct: 158 VNLESLANWEEKQMFKEFMEDHNTATFPSKKYYNLDAYYQRKIQKDMKKGHKKVVAGERT 217

Query: 194 VFDDEEQRRQELLIEREKHKEEQVEVLKRSMQTGMAQAMKEQARLREEMAYQYKLGNFEA 253
           VFDDEEQRRQELLIEREKHKEEQVE LKRSMQTGMAQAMKEQARLREEMAYQYKLGNFEA
Sbjct: 218 VFDDEEQRRQELLIEREKHKEEQVEALKRSMQTGMAQAMKEQARLREEMAYQYKLGNFEA 277

Query: 254 AAAIQRRLDPDVAL 268
           AAAIQRRLDPDVAL
Sbjct: 278 AAAIQRRLDPDVAL 291

[Close]

BLAST of Chy6G122310 vs. ExPASy TrEMBL
Match: A0A1S3BU92 (LOW QUALITY PROTEIN: vicilin-like seed storage protein At2g18540 OS=Cucumis melo OX=3656 GN=LOC103493338 PE=4 SV=1)

HSP 1 Score: 251.5 bits (641), Expect = 3.9e-63
Identity = 132/134 (98.51%), Postives = 132/134 (98.51%), Query Frame = 0


Query: 134 VNLESLANWEEKQMFKEFMEDHNTATFPSKKYYNLDAYYQRKIQKDMKKGQKKVVAGERT 193
           VNLESLANWEEKQMFKEFMEDHNTATFPSKKYYNLDAYYQRKIQKDMKKG KKVVAGERT
Sbjct: 228 VNLESLANWEEKQMFKEFMEDHNTATFPSKKYYNLDAYYQRKIQKDMKKGHKKVVAGERT 287

Query: 194 VFDDEEQRRQELLIEREKHKEEQVEVLKRSMQTGMAQAMKEQARLREEMAYQYKLGNFEA 253
           VFDDEEQRRQELLIEREKHKEEQVE LKRSMQTGMAQAMKEQARLREEMAYQYKLGNFEA
Sbjct: 288 VFDDEEQRRQELLIEREKHKEEQVEALKRSMQTGMAQAMKEQARLREEMAYQYKLGNFEA 347

Query: 254 AAAIQRRLDPDVAL 268
           AAAIQRRLDPDVAL
Sbjct: 348 AAAIQRRLDPDVAL 361

[Close]

BLAST of Chy6G122310 vs. ExPASy TrEMBL
Match: A0A6J1KTR2 (troponin I OS=Cucurbita maxima OX=3661 GN=LOC111496293 PE=4 SV=1)

HSP 1 Score: 243.8 bits (621), Expect = 8.1e-61
Identity = 126/134 (94.03%), Postives = 130/134 (97.01%), Query Frame = 0


Query: 134 VNLESLANWEEKQMFKEFMEDHNTATFPSKKYYNLDAYYQRKIQKDMKKGQKKVVAGERT 193
           VNLESLANWEEKQMFKEFMEDHNTATFPSKKYYNLDAYYQ K+ KDMKKG KK++AGERT
Sbjct: 224 VNLESLANWEEKQMFKEFMEDHNTATFPSKKYYNLDAYYQHKMLKDMKKGHKKILAGERT 283

Query: 194 VFDDEEQRRQELLIEREKHKEEQVEVLKRSMQTGMAQAMKEQARLREEMAYQYKLGNFEA 253
           VFDDEEQRRQELL+EREKHKEEQVE LKRSMQTGMAQAMKEQARLREEMAYQYKLGNFEA
Sbjct: 284 VFDDEEQRRQELLVEREKHKEEQVEALKRSMQTGMAQAMKEQARLREEMAYQYKLGNFEA 343

Query: 254 AAAIQRRLDPDVAL 268
           AAAIQRRLDPDVAL
Sbjct: 344 AAAIQRRLDPDVAL 357

[Close]

BLAST of Chy6G122310 vs. NCBI nr
Match: XP_004133704.1 (vicilin-like seed storage protein At2g18540 [Cucumis sativus] >KGN56256.2 hypothetical protein Csa_010843 [Cucumis sativus])

HSP 1 Score: 254 bits (649), Expect = 1.59e-79
Identity = 134/134 (100.00%), Postives = 134/134 (100.00%), Query Frame = 0


Query: 134 VNLESLANWEEKQMFKEFMEDHNTATFPSKKYYNLDAYYQRKIQKDMKKGQKKVVAGERT 193
           VNLESLANWEEKQMFKEFMEDHNTATFPSKKYYNLDAYYQRKIQKDMKKGQKKVVAGERT
Sbjct: 229 VNLESLANWEEKQMFKEFMEDHNTATFPSKKYYNLDAYYQRKIQKDMKKGQKKVVAGERT 288

Query: 194 VFDDEEQRRQELLIEREKHKEEQVEVLKRSMQTGMAQAMKEQARLREEMAYQYKLGNFEA 253
           VFDDEEQRRQELLIEREKHKEEQVEVLKRSMQTGMAQAMKEQARLREEMAYQYKLGNFEA
Sbjct: 289 VFDDEEQRRQELLIEREKHKEEQVEVLKRSMQTGMAQAMKEQARLREEMAYQYKLGNFEA 348

Query: 254 AAAIQRRLDPDVAL 267
           AAAIQRRLDPDVAL
Sbjct: 349 AAAIQRRLDPDVAL 362

[Close]

BLAST of Chy6G122310 vs. NCBI nr
Match: KAA0060657.1 (vicilin-like seed storage protein [Cucumis melo var. makuwa])

HSP 1 Score: 251 bits (640), Expect = 1.83e-79
Identity = 132/134 (98.51%), Postives = 132/134 (98.51%), Query Frame = 0


Query: 134 VNLESLANWEEKQMFKEFMEDHNTATFPSKKYYNLDAYYQRKIQKDMKKGQKKVVAGERT 193
           VNLESLANWEEKQMFKEFMEDHNTATFPSKKYYNLDAYYQRKIQKDMKKG KKVVAGERT
Sbjct: 133 VNLESLANWEEKQMFKEFMEDHNTATFPSKKYYNLDAYYQRKIQKDMKKGHKKVVAGERT 192

Query: 194 VFDDEEQRRQELLIEREKHKEEQVEVLKRSMQTGMAQAMKEQARLREEMAYQYKLGNFEA 253
           VFDDEEQRRQELLIEREKHKEEQVE LKRSMQTGMAQAMKEQARLREEMAYQYKLGNFEA
Sbjct: 193 VFDDEEQRRQELLIEREKHKEEQVEALKRSMQTGMAQAMKEQARLREEMAYQYKLGNFEA 252

Query: 254 AAAIQRRLDPDVAL 267
           AAAIQRRLDPDVAL
Sbjct: 253 AAAIQRRLDPDVAL 266

[Close]

BLAST of Chy6G122310 vs. NCBI nr
Match: XP_008452265.2 (PREDICTED: LOW QUALITY PROTEIN: vicilin-like seed storage protein At2g18540 [Cucumis melo])

HSP 1 Score: 251 bits (640), Expect = 3.51e-78
Identity = 132/134 (98.51%), Postives = 132/134 (98.51%), Query Frame = 0


Query: 134 VNLESLANWEEKQMFKEFMEDHNTATFPSKKYYNLDAYYQRKIQKDMKKGQKKVVAGERT 193
           VNLESLANWEEKQMFKEFMEDHNTATFPSKKYYNLDAYYQRKIQKDMKKG KKVVAGERT
Sbjct: 228 VNLESLANWEEKQMFKEFMEDHNTATFPSKKYYNLDAYYQRKIQKDMKKGHKKVVAGERT 287

Query: 194 VFDDEEQRRQELLIEREKHKEEQVEVLKRSMQTGMAQAMKEQARLREEMAYQYKLGNFEA 253
           VFDDEEQRRQELLIEREKHKEEQVE LKRSMQTGMAQAMKEQARLREEMAYQYKLGNFEA
Sbjct: 288 VFDDEEQRRQELLIEREKHKEEQVEALKRSMQTGMAQAMKEQARLREEMAYQYKLGNFEA 347

Query: 254 AAAIQRRLDPDVAL 267
           AAAIQRRLDPDVAL
Sbjct: 348 AAAIQRRLDPDVAL 361

[Close]

BLAST of Chy6G122310 vs. NCBI nr
Match: XP_038906271.1 (vicilin-like seed storage protein At2g18540 [Benincasa hispida])

HSP 1 Score: 248 bits (634), Expect = 2.90e-77
Identity = 130/134 (97.01%), Postives = 131/134 (97.76%), Query Frame = 0


Query: 134 VNLESLANWEEKQMFKEFMEDHNTATFPSKKYYNLDAYYQRKIQKDMKKGQKKVVAGERT 193
           VNLESLANWEEKQMFKEFMEDHNTATFPSKKYYNLDAYYQRKIQKDMKKG KK+V GERT
Sbjct: 229 VNLESLANWEEKQMFKEFMEDHNTATFPSKKYYNLDAYYQRKIQKDMKKGHKKIVEGERT 288

Query: 194 VFDDEEQRRQELLIEREKHKEEQVEVLKRSMQTGMAQAMKEQARLREEMAYQYKLGNFEA 253
           VFDDEEQRRQELLIEREKHKEEQVE LKRSMQTGMAQAMKEQARLREEMAYQYKLGNFEA
Sbjct: 289 VFDDEEQRRQELLIEREKHKEEQVEALKRSMQTGMAQAMKEQARLREEMAYQYKLGNFEA 348

Query: 254 AAAIQRRLDPDVAL 267
           AAAIQRRLDPDVAL
Sbjct: 349 AAAIQRRLDPDVAL 362

[Close]

BLAST of Chy6G122310 vs. NCBI nr
Match: TYK02218.1 (vicilin-like seed storage protein [Cucumis melo var. makuwa])

HSP 1 Score: 251 bits (640), Expect = 4.91e-76
Identity = 132/134 (98.51%), Postives = 132/134 (98.51%), Query Frame = 0


Query: 134 VNLESLANWEEKQMFKEFMEDHNTATFPSKKYYNLDAYYQRKIQKDMKKGQKKVVAGERT 193
           VNLESLANWEEKQMFKEFMEDHNTATFPSKKYYNLDAYYQRKIQKDMKKG KKVVAGERT
Sbjct: 158 VNLESLANWEEKQMFKEFMEDHNTATFPSKKYYNLDAYYQRKIQKDMKKGHKKVVAGERT 217

Query: 194 VFDDEEQRRQELLIEREKHKEEQVEVLKRSMQTGMAQAMKEQARLREEMAYQYKLGNFEA 253
           VFDDEEQRRQELLIEREKHKEEQVE LKRSMQTGMAQAMKEQARLREEMAYQYKLGNFEA
Sbjct: 218 VFDDEEQRRQELLIEREKHKEEQVEALKRSMQTGMAQAMKEQARLREEMAYQYKLGNFEA 277

Query: 254 AAAIQRRLDPDVAL 267
           AAAIQRRLDPDVAL
Sbjct: 278 AAAIQRRLDPDVAL 291

[Close]

BLAST of Chy6G122310 vs. TAIR 10
Match: AT5G53800.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 177.6 bits (449), Expect = 1.4e-44
Identity = 93/134 (69.40%), Postives = 110/134 (82.09%), Query Frame = 0


Query: 134 VNLESLANWEEKQMFKEFMEDHNTATFPSKKYYNLDAYYQRKIQKDMKKGQKKVVAGERT 193
           VNLESL  WEEK+MFK+FMEDHNT TF SKKYY++D YY+ K++K+MKKG KK    ERT
Sbjct: 218 VNLESLPPWEEKKMFKDFMEDHNTGTFTSKKYYDIDGYYRLKLEKEMKKGLKKAGISERT 277

Query: 194 VFDDEEQRRQELLIEREKHKEEQVEVLKRSMQTGMAQAMKEQARLREEMAYQYKLGNFEA 253
           VF+DEEQRR E+   RE+ KEE+V  LKRSM+ GMAQAMKEQARL+EEM Y YK+G+ E 
Sbjct: 278 VFNDEEQRRLEMQELRERQKEEEVLALKRSMEGGMAQAMKEQARLKEEMVYLYKIGDMEG 337

Query: 254 AAAIQRRLDPDVAL 268
           AAAIQRRLDPDV +
Sbjct: 338 AAAIQRRLDPDVPM 351

The following BLAST results are available for this feature:

BLAST of Chy6G122310 vs.


Match Name	E-value	Identity	Description

BLAST of Chy6G122310 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L2M5	1.2e-64	98.53	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G104880 PE=4 SV=1	[more]
A0A5A7V1G4	3.9e-63	98.51	Vicilin-like seed storage protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A5D3BTB2	3.9e-63	98.51	Vicilin-like seed storage protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A1S3BU92	3.9e-63	98.51	LOW QUALITY PROTEIN: vicilin-like seed storage protein At2g18540 OS=Cucumis melo...	[more]
A0A6J1KTR2	8.1e-61	94.03	troponin I OS=Cucurbita maxima OX=3661 GN=LOC111496293 PE=4 SV=1	[more]

BLAST of Chy6G122310 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004133704.1	1.59e-79	100.00	vicilin-like seed storage protein At2g18540 [Cucumis sativus] >KGN56256.2 hypoth...	[more]
KAA0060657.1	1.83e-79	98.51	vicilin-like seed storage protein [Cucumis melo var. makuwa]	[more]
XP_008452265.2	3.51e-78	98.51	PREDICTED: LOW QUALITY PROTEIN: vicilin-like seed storage protein At2g18540 [Cuc...	[more]
XP_038906271.1	2.90e-77	97.01	vicilin-like seed storage protein At2g18540 [Benincasa hispida]	[more]
TYK02218.1	4.91e-76	98.51	vicilin-like seed storage protein [Cucumis melo var. makuwa]	[more]

BLAST of Chy6G122310 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G53800.1	1.4e-44	69.40	unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae -...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 195..215
None	No IPR available	PANTHER	PTHR34689	NUCLEIC ACID-BINDING PROTEIN	coord: 134..266

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy6G122310.1	Chy6G122310.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0004386	helicase activity