Chy6G120190 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGATGGGCAAGGTGAGGTCCCGGGCACAGAGCTATAATGCTTCTCATGCGCTATGGTACAATGTTAGGGGTTAGTAAAATATGGAAAGCGTCGTGGTGCTCTCGACTTTTTATAAATAACATTTTTCAAACTAAGACTCTAACGAACCAACTTTTTAAATTAAGTTGAGGTCATTACTAAAATAAAAAATAAATAATATTTTTAATTCAAAATCATACAAAGTTTAACTCATTTTATTAAAGAAATATATATAAAAATATAATCTCATGCAGAAAACCAAATGCTTAGAAAAATAAATAACGAAATAATTTATTCGGACCCTGAGTAAAACATAAAGAAGCCATAAGTTTAAATAACAACTATCTATCAATAGTAATAACATTCTAAAATCATCAAATCAAAATAGGGTATCAGAAGGATCAGTCATAACTAGTCTCATTGGCACGGTCATGGGTTCTTATTGTCACTTGCTAGCTTTCCTTAACTTTTATCTAAAAAATAAACATGGAAATGGTGAGTATATAAAATAGGGTTGTGGAGAAGAATAACATATTATAGGTTTTACTTTGGGAAAATAGCAAAAATAATTTTAAATTGTTAGAATAGCAAAACATAAAAAATAAAACTATAAATAAATAAAACAATCCCTCAAATGCCCCTATCCAAACTGAAAAATACAAATTGTTTACTCAAAAACATAAACCCCAATTACATTGTAATTGAAATAACAAATGCTACAAAAAAAAAAAAAACTTTAACAAAAAGCTACGTGCGGTACTTGAAATCAATAATCGCTGCAAGTGAAGGAAGAAGACGACTTACGTATACAAAGACGATCTAACTAAGAAGAACCACTCACCACCCTCGTCATCGTCCTCACTGCAACGCCAACCGGAGGAGATCAAGAAAGTGAAGAAGAGAGTGACATTTGTTGACATTGAACCAGTGATAATCACCATTAGTACTGAGAGGAGGAGGAGTTTGAGGATGAACGAAGAAGAAAGTGAGAATTATGGTGAAATTGAAGAAACAAGAAGCGAATCAAATGCTTTCGAGGTGCTCCAATGGTGGCGTTCTTGA ATGATGGGCAAGGTGAGGTCCCGGGCACAGAGCTATAATGCTTCTCATGCGCTATGGAAGAAGACGACTTACGTATACAAAGACGATCTAACTAAGAAGAACCACTCACCACCCTCGTCATCGTCCTCACTGCAACGCCAACCGGAGGAGATCAAGAAAGTGAAGAAGAGAGTGACATTTGTTGACATTGAACCAGTGATAATCACCATTAGTACTGAGAGGAGGAGGAGTTTGAGGATGAACGAAGAAGAAAGTGAGAATTATGGTGAAATTGAAGAAACAAGAAGCGAATCAAATGCTTTCGAGGTGCTCCAATGGTGGCGTTCTTGA ATGATGGGCAAGGTGAGGTCCCGGGCACAGAGCTATAATGCTTCTCATGCGCTATGGAAGAAGACGACTTACGTATACAAAGACGATCTAACTAAGAAGAACCACTCACCACCCTCGTCATCGTCCTCACTGCAACGCCAACCGGAGGAGATCAAGAAAGTGAAGAAGAGAGTGACATTTGTTGACATTGAACCAGTGATAATCACCATTAGTACTGAGAGGAGGAGGAGTTTGAGGATGAACGAAGAAGAAAGTGAGAATTATGGTGAAATTGAAGAAACAAGAAGCGAATCAAATGCTTTCGAGGTGCTCCAATGGTGGCGTTCTTGA MMGKVRSRAQSYNASHALWKKTTYVYKDDLTKKNHSPPSSSSSLQRQPEEIKKVKKRVTFVDIEPVIITISTERRRSLRMNEEESENYGEIEETRSESNAFEVLQWWRS* Homology
BLAST of Chy6G120190 vs. ExPASy TrEMBL
Match: A0A0A0KYE1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G052080 PE=4 SV=1) HSP 1 Score: 87.0 bits (214), Expect = 5.2e-14 Identity = 50/81 (61.73%), Postives = 59/81 (72.84%), Query Frame = 0
BLAST of Chy6G120190 vs. ExPASy TrEMBL
Match: A0A5D3D246 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G003900 PE=4 SV=1) HSP 1 Score: 85.1 bits (209), Expect = 2.0e-13 Identity = 48/67 (71.64%), Postives = 51/67 (76.12%), Query Frame = 0
BLAST of Chy6G120190 vs. ExPASy TrEMBL
Match: A0A1S3BS40 (uncharacterized protein LOC103493098 OS=Cucumis melo OX=3656 GN=LOC103493098 PE=4 SV=1) HSP 1 Score: 85.1 bits (209), Expect = 2.0e-13 Identity = 48/67 (71.64%), Postives = 51/67 (76.12%), Query Frame = 0
BLAST of Chy6G120190 vs. ExPASy TrEMBL
Match: A0A0A0KZ22 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G091930 PE=4 SV=1) HSP 1 Score: 78.6 bits (192), Expect = 1.8e-11 Identity = 41/61 (67.21%), Postives = 48/61 (78.69%), Query Frame = 0
BLAST of Chy6G120190 vs. NCBI nr
Match: KAE8649206.1 (hypothetical protein Csa_015041 [Cucumis sativus]) HSP 1 Score: 89.4 bits (220), Expect = 3.96e-20 Identity = 45/55 (81.82%), Postives = 48/55 (87.27%), Query Frame = 0
BLAST of Chy6G120190 vs. NCBI nr
Match: XP_011653217.1 (uncharacterized protein LOC105435188 [Cucumis sativus]) HSP 1 Score: 89.4 bits (220), Expect = 4.88e-20 Identity = 45/55 (81.82%), Postives = 48/55 (87.27%), Query Frame = 0
BLAST of Chy6G120190 vs. NCBI nr
Match: XP_008451951.1 (PREDICTED: uncharacterized protein LOC103493098 [Cucumis melo] >KAA0044901.1 uncharacterized protein E6C27_scaffold74G001940 [Cucumis melo var. makuwa] >TYK16569.1 uncharacterized protein E5676_scaffold21G003900 [Cucumis melo var. makuwa]) HSP 1 Score: 86.7 bits (213), Expect = 5.27e-19 Identity = 48/67 (71.64%), Postives = 51/67 (76.12%), Query Frame = 0
BLAST of Chy6G120190 vs. NCBI nr
Match: XP_038906331.1 (uncharacterized protein LOC120092170 [Benincasa hispida]) HSP 1 Score: 70.1 bits (170), Expect = 1.46e-12 Identity = 44/67 (65.67%), Postives = 49/67 (73.13%), Query Frame = 0
BLAST of Chy6G120190 vs. NCBI nr
Match: KAG6600516.1 (hypothetical protein SDJN03_05749, partial [Cucurbita argyrosperma subsp. sororia] >KAG7031155.1 hypothetical protein SDJN02_05195, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 57.8 bits (138), Expect = 7.96e-08 Identity = 36/63 (57.14%), Postives = 43/63 (68.25%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
|