Chy6G120090 (gene) Cucumber (hystrix) v1

Overview


Name	Chy6G120090
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	cystinosin homolog
Location	chrH06: 16112150 .. 16116889 (-)
RNA-Seq Expression	Chy6G120090
Synteny	Chy6G120090

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTTCATGGAATTCAATATCAATGGAGATCCTATACGGGGTATTAGGATGGATTTCCATCGTATGCTGGGCGCTTGCTTCCTATCCACAGGTCATTCTAAATTTCCGACGCAAAAGGTACTAACTACTACTACTGTTAATTAATGAATATTCCCTCCTCCCCTCAATATTATTATTAATCTGATTCTATTATTTGGATTTTGATTTTGTTAGTGTTGTAGGATTGAGCTTCGATTACTTGATTTTGAATTTCACCAAACAATCTTCCTATTTGATATACAACGCCACCCTCTTCTTTAGTACCTCTGTTCAGAAGCAGTACTTTGATAAATATGGCTACCATCAGGTACAGTTATCTCCTTGCCTATTCCCAAATTCCATTCCCAAATATCCCAATAGAATCATAAATATATCTAAATCTAGAAAATTACTTTTTAAATAACAAAAACTCTCCAACACACTTATCTAATTCCACTCTTTTGTTTTTACCAATCTCATCATCGCCAAATTTAGCCGAGGTGAGGCCTTGATCAAACTCAATTTTAAGCTAAATATATTACATACATACATATATATAATATATGTAAAAAATTAAACAATACGAATTTTTAGAACATACCTTAGTGTTAAATTTTTTTTAGATTCCTTCAGCTTCACTCTTTATATTACTCTTTATATTTTTCTGTATCCACTACTGAATCTACTCGTAATAAGTTTTTATAAAATTGTTTTGAATAGCAAAATTACTAAATATATTTATTTATATCTATTATTGTCTATCAATGATAGATAAATAATCAACACTATCAATGATATTTTATTCTATTTTTATTTATTTTGATATTTATTTGAAAACAACACTCTGTAAATATTTTGTTTCATTTTTTATATCTCAAAACAATCCTTTAAATTAGTAAAGAGATATTTATAATTTTTAAACTAAATTAATAATACAATAACGGTGAAATAAGGATTCTAATCTCTAGGTTATGTGAATTATTTTTGAGGTTTTTTAAATATAGCAAAATTGACTAAAATATTAATAAAATATAATAGACTATATTGATTTATCATTCCTCTGTCACAAAATATTGTGATATTTTGTTACATTTTTTCGTTATTTCTATGGTTGATATGTAATCAATTTGGTTAACTTTTTATACAAGTCCGTATAAATTATTATAATATTGACAACTTTTTTTATGACACAATAGGACACAATAATTTATTTCTTATATTGACGTTGAATGGGTGGAGATGGGTGAAAATACTATTCATTCTCTCCCTCCATTTTACAAAATCTTTATAGATTTTTTAATATAATAAAATTATTTATATTAATAAATTAATAATAATTTATTAGAGTATTTACTTAATTTATTTTTAAAATGTAAGCCATCTTATTATTGAATGTTAACTTAAAGAGGCTAAAATAAATATATTTATTTTATAACTTAGATTAAAAGTTGGAAAACTAGAATAGGATTTAAACCTTATTTATCCGTATCCCTATATAAGACTAATAGAATTATATGTCTATGACTTCCTGGAAATGGATTTTCAGTCTCTCTCTCTCCTGAGATTCACCACCTTCATTTCCTGGCACAATACCCAATTTATGGGGAAATCAAGAATAACAGTGTGGTTTTATGATTGTGCTGTACAAGGCACTCACGCTGCAGCTTTTCAGTTAAATGAATTGCATTGAATCTGAACCCTTTTCATTTCTTCCTTTAGATGATACCGGTGGCTTTGAGCGATGTCTTTTTCCCCTTCCACTCGATTATACTGATCTTCGTCGTCTCCGTTCAAATTGTATTTTTTGATGTCAGTGGTTTGTTCTCTTTCCGCCTTGGATCTTGCTTTGGTTTAATTTGGGTTGCTATTTCGCATTGTTTTGATTGGATTTTGATGCAGCGTGGCAGCCAGAAAGTCTCGAAGGCATCAATTGCCATCTTGGTCGCAGTATGGTTTTTTGCAGGAGCCTGCTTTTTTATGGCTCTGCCAACCCATTCATGGCTTTGGCTTGTCTCCATATTCAAGTAACCATCTCCCCGTCTCTTTATTGTGAAGCTATGTTGGTTTGGTTGACTTGCTAATAGTTCAACGAGGATCATTGTCAATGTGTTGCAGTTCGATTCAAGTTTTTATGACATTCATCAAATACTCTCCTCAGGTTTGGCTTTCTGCCCAGTAGAAAGTAGGCTAAACTACACATTAAATCTTCCATTATACATATACCAACTTTTTTCATGATTCAACTTAATAAATATGCTAACCTTTTTACTTATCATGTTTCTTTTTCCCTCTCCACAATAAGTTAACACCTAAGAGAATCATTCATTTTATCAAATTGGTTTTCATGTGTGTGGTCTTCATGAGAATAAAGAAAAGGTGATTGAGAAAAGAATTGGCACAATTCACATTCTACTTGTGTTCATATCTTTTTAATATTTTAATCCGTTAATTTTTATAGCCCACCCAATCTTTGGGGCTCAAAATATAATAGTGGTGTTTACAACTATTTATAAACCCACGATTAACTGCACTAATACTATCTGAAATCCCACTTTGTTATGGTGTTTACTATTTTTTACTATCCTCTCTCCTTCTTTGCTAAAATGTGTAGTCTAGCCTGCACTCCTCTCCAAGTATAGACTATTGTAATTTAGAATAAAATAGTTTGCACTCAAAAACATCAACTATTATAACACACTAATTAACCATTAAGTGTCCCAAACTCTTCCCCCCTAAATGTTTTAATGCATTCTTGTCCATTAACAAAAATGTCAAGTATATGAAAATAAAATTTATCTTTAATCATCTCTCTGGAAAGACACAAAGTTTGCATACGTTTGGACCTACAACTCTACAACAATAGTCCAATCCCAAGTAAGGTGATATTTAATAGAATTATCCAGCCCAGTAAATCATGGAATTATTTACCTAACCAAACGTACTCAACATGACCATGTTGCTCTTAAGAATTGTAAAGTCATTTAGGGTTTTAAAAAAAAATTGTGTATGCTACTGATATGAATTTTCTAACAGAGAACAAAGCTTGCGTTTCATGAAATCTATGTTGTTTACATACAGGCATTTTTGAACTTCACCAGGAAGAGTACAGTGGGATTCAGCATTGGTAATATAGTTCTGGACTTCAGTGGAGGAGTGGCAACTTTGGCTCAAATGAGCGTGCAATCAGTTGACCAAGGTCATCTAATGTTTTTTTAACCTAACGTATTCCAAATACTTGAATTGTAATTGACATTCATGCTTTGCTTGGAATTGAGTCATATTTCATTTCAACCGTATACTTTTTTATAAAGAAGTGAAAGTTAATGTTCAAATCGTATGAAAAATTAATCTATCAGAAGATAAATGCAAAACACTCTAAGCATATGATTCTGATTTGGTTGTTCATCCCAAGGTTAGGTTGAGCTTATAATAATCTGTTTTGGACGGTTCCTATTATATGAAACATTTATATTTATCAATGTAAACGTCTGCTTTTAGTCTTTCCTATAAAGATTTCCATTTAAAAAGTCTTCATGTCTCCTTAATCTGCCTTTTCGTGATTAGGACAGGTTCTTAAGGCTTCTTGGGGAATGAGGTGTGTTCAATTTGGCGAGATCTTTTGGAAGAGAGGAATCATAGAATTTGTAAAGATTTGGCAAGGGAACCTAAGGATGTTTCATCCTTTGTTTCGTTACGTTTCATCCTTGCTTATGTTACAATATTGAGTCTCTAATTAATTTATCGGTCTATTTATGCAAGTAATCTCATTAAATATTGCACTAATTTCTACGATAGGACTAAATTGTTTCAAATTTTGAAGTATAAGTACTAAATTGTTACATAGTGAAGTTCATTGACTAGATCGTAGCAAAGTTGAAGTAGAGGGACTAAATCGGTAGAAATCAAAGTTCATGAACTAAACTGTTATTTTTTTATGAAAATTTTGGGACTAATGATTTTTAGCCCATTTGTTCCTGTTCTAAAAAATATATTTATCTATGTACTTTTGTAATCAATACAAATTTTGGGGTTAACTCAACATATTTGGTTTGATGCTTTTATCATTCTATTGAAGTAATGATTTAGTTCACTGAAGTTTAGCATGTAACAATTTAGTTCGATAGTTTAAGATTTGTAATAACCTAGTTTTTCAATTTTAGCTTGCATTGATTTAGTTAGTTAATATTTTGTAATGATTTAATCCTTAAGAGTCAGAAATTTTGTAACGGTAAAGTATTGATCTTTTACTATTTATCAATCTACATGCATTTGAAACCTTCCTTGCATCTGGACTGAAATTTCATGCAGGAAAACTAAATCACTACAAAATTTAAAAACTGCATATTCCGTCTAGATTTTGACTTCGGCTTTTTTCCAGGTTCTTGGGTGAACTTTTTGGGAAACATAGGGAAGCCCTTGCTAGCTTTGGTAAGATCTCTCTCTCTTGTAGAAGTCTAATTCCTTGTATTGCCGACGATATCATTTAAGGAGCAAACTATGGCATTTAAACAAGTTATTTGAGTTTGCGGTATTTGCTCACTATATCCACACTGTGCTGCAGGTCTCTATAGCGTTTGATCTGATTTTCTTCTATCAACATTTTGTATTATATCATATCAAGGCATCAAGGGTTTCATTTCAACGTGACCCTGAAAGCACCGACTCTGAACCATTAATTAAGGACTCTGATCACTTGCAAGGGATTGGCACAACCAGTTGA

mRNA sequence

ATGAGTTCATGGAATTCAATATCAATGGAGATCCTATACGGGGTATTAGGATGGATTTCCATCGTATGCTGGGCGCTTGCTTCCTATCCACAGATGATACCGGTGGCTTTGAGCGATGTCTTTTTCCCCTTCCACTCGATTATACTGATCTTCGTCGTCTCCGTTCAAATTGTATTTTTTGATCGTGGCAGCCAGAAAGTCTCGAAGGCATCAATTGCCATCTTGGTCGCAGTATGGTTTTTTGCAGGAGCCTGCTTTTTTATGGCTCTGCCAACCCATTCATGGCTTTGGCTTGTCTCCATATTCAATTCGATTCAAGTTTTTATGACATTCATCAAATACTCTCCTCAGGCATTTTTGAACTTCACCAGGAAGAGTACAGTGGGATTCAGCATTGGTAATATAGTTCTGGACTTCAGTGGAGGAGTGGCAACTTTGGCTCAAATGAGCGTGCAATCAGTTGACCAAGGTTCTTGGGTGAACTTTTTGGGAAACATAGGGAAGCCCTTGCTAGCTTTGGTCTCTATAGCGTTTGATCTGATTTTCTTCTATCAACATTTTGTATTATATCATATCAAGGCATCAAGGGTTTCATTTCAACGTGACCCTGAAAGCACCGACTCTGAACCATTAATTAAGGACTCTGATCACTTGCAAGGGATTGGCACAACCAGTTGA

Coding sequence (CDS)

ATGAGTTCATGGAATTCAATATCAATGGAGATCCTATACGGGGTATTAGGATGGATTTCCATCGTATGCTGGGCGCTTGCTTCCTATCCACAGATGATACCGGTGGCTTTGAGCGATGTCTTTTTCCCCTTCCACTCGATTATACTGATCTTCGTCGTCTCCGTTCAAATTGTATTTTTTGATCGTGGCAGCCAGAAAGTCTCGAAGGCATCAATTGCCATCTTGGTCGCAGTATGGTTTTTTGCAGGAGCCTGCTTTTTTATGGCTCTGCCAACCCATTCATGGCTTTGGCTTGTCTCCATATTCAATTCGATTCAAGTTTTTATGACATTCATCAAATACTCTCCTCAGGCATTTTTGAACTTCACCAGGAAGAGTACAGTGGGATTCAGCATTGGTAATATAGTTCTGGACTTCAGTGGAGGAGTGGCAACTTTGGCTCAAATGAGCGTGCAATCAGTTGACCAAGGTTCTTGGGTGAACTTTTTGGGAAACATAGGGAAGCCCTTGCTAGCTTTGGTCTCTATAGCGTTTGATCTGATTTTCTTCTATCAACATTTTGTATTATATCATATCAAGGCATCAAGGGTTTCATTTCAACGTGACCCTGAAAGCACCGACTCTGAACCATTAATTAAGGACTCTGATCACTTGCAAGGGATTGGCACAACCAGTTGA

Protein sequence

MSSWNSISMEILYGVLGWISIVCWALASYPQMIPVALSDVFFPFHSIILIFVVSVQIVFFDRGSQKVSKASIAILVAVWFFAGACFFMALPTHSWLWLVSIFNSIQVFMTFIKYSPQAFLNFTRKSTVGFSIGNIVLDFSGGVATLAQMSVQSVDQGSWVNFLGNIGKPLLALVSIAFDLIFFYQHFVLYHIKASRVSFQRDPESTDSEPLIKDSDHLQGIGTTS*

Homology

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BLAST of Chy6G120090 vs. ExPASy Swiss-Prot
Match: P57758 (Cystinosin homolog OS=Arabidopsis thaliana OX=3702 GN=At5g40670 PE=2 SV=1)

HSP 1 Score: 230.7 bits (587), Expect = 1.6e-59
Identity = 127/270 (47.04%), Postives = 165/270 (61.11%), Query Frame = 0


Query: 1   MSSWNSISMEILYGVLGWISIVCWALASYPQ----------------------------- 60
           M+SWNSI +EI Y ++GWI+   W+++ YPQ                             
Sbjct: 1   MASWNSIPLEISYEIVGWIAFASWSISFYPQLILNFRRRSVVGLNFDFVMLNLTKHSSYM 60

Query: 61  ------------------------MIPVALSDVFFPFHSIILIFVVSVQIVFFDRGSQKV 120
                                   MIPVA +DV F  H++++  V   QI  ++RG QKV
Sbjct: 61  IYNVCLYFSPVIQKQYFDTYGDKEMIPVAANDVAFSIHAVVMTAVTLFQIFIYERGPQKV 120

Query: 121 SKASIAILVAVWFFAGACFFMALPTHSWLWLVSIFNSIQVFMTFIKYSPQAFLNFTRKST 180
           S+ +I I+V VW FA  CFF+ALPTHSWLWL+SIFNSIQVFMT +KY PQA +NFTRKST
Sbjct: 121 SRLAIGIVVVVWGFAAICFFIALPTHSWLWLISIFNSIQVFMTCVKYIPQAKMNFTRKST 180

Query: 181 VGFSIGNIVLDFSGGVATLAQMSVQSVDQGSWVNFLGNIGKPLLALVSIAFDLIFFYQHF 218
           VG+SIGNI+LDF+GG+A   QM +QS+DQ SW NF GN+GK LL+L+SI FD++F +QH+
Sbjct: 181 VGWSIGNILLDFTGGLANYLQMVIQSIDQNSWKNFYGNMGKTLLSLISIFFDILFMFQHY 240

[Close]

BLAST of Chy6G120090 vs. ExPASy Swiss-Prot
Match: Q54WT7 (Cystinosin homolog OS=Dictyostelium discoideum OX=44689 GN=ctns PE=3 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 7.1e-31
Identity = 79/241 (32.78%), Postives = 120/241 (49.79%), Query Frame = 0


Query: 8   SMEILYGVLGWISIVCWALASYPQM----------------------------------- 67
           ++ I+  ++GWI   CW+L+ YPQ+                                   
Sbjct: 3   ALSIISIIIGWIYFACWSLSFYPQVILNFRKKNVIGLSFDFLLFNITGYACYSVFNSVLY 62

Query: 68  ----------------IPVALSDVFFPFHSIILIFVVSVQIVFFDRGSQKVSKASIAILV 127
                           IPV  SD+ F  H  +L  +  +Q   +DRG+QK SK  I I  
Sbjct: 63  FDKLVKNEYYDKYGPPIPVQQSDIAFAIHGFVLTAITIIQCFIYDRGNQKNSKLGIGIAT 122

Query: 128 AVWFFAGACFFMALP-THSWLWLVSIFNSIQVFMTFIKYSPQAFLNFTRKSTVGFSIGNI 187
            +W        +      +WLW+++ ++ +++F+TFIKY PQA+LNF  KST G+S+ N+
Sbjct: 123 LIWVSLIVMTILGFSNVFTWLWVINYYSYVKLFITFIKYIPQAYLNFKNKSTSGWSVHNV 182

Query: 188 VLDFSGGVATLAQMSVQSVDQGSWVNFLGNIGKPLLALVSIAFDLIFFYQHFVLYHIKAS 197
           +LDFSGGV +L QM +   D G+W  F G+  K  L+L SIAFD++F  QH++LY    S
Sbjct: 183 LLDFSGGVLSLLQMFLDVADSGNWNIFTGDPVKLGLSLFSIAFDILFIIQHYILYRNPKS 242

[Close]

BLAST of Chy6G120090 vs. ExPASy Swiss-Prot
Match: A7MB63 (Cystinosin OS=Bos taurus OX=9913 GN=CTNS PE=2 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 1.5e-28
Identity = 78/181 (43.09%), Postives = 110/181 (60.77%), Query Frame = 0


Query: 16  LGWI-SIVCWALASYPQMI-PVALSDVFFPFHSIILIFVVSVQIVFFDRGSQKVSKASIA 75
           L W+ SI    L  YP  + PV  +DVFF  H++ L  VV VQ + ++RGSQ+VS  +I+
Sbjct: 180 LFWVPSIKEQFLLKYPNGVNPVDSNDVFFSLHAVALTLVVIVQCLLYERGSQRVSWLAIS 239

Query: 76  ILVAVWFFAGACFFM-ALPTHSWLWLVSIFNSIQVFMTFIKYSPQAFLNFTRKSTVGFSI 135
            LV  W F      M A+   +WL  +  F+ I++ +T +KY PQA++NF  KST G+SI
Sbjct: 240 FLVLSWLFTLIALIMAAVGATTWLQFLFCFSYIKLAVTLVKYFPQAYMNFHYKSTEGWSI 299

Query: 136 GNIVLDFSGGVATLAQMSVQSVDQGSWVNFLGNIGKPLLALVSIAFDLIFFYQHFVLYHI 194
           GN++LDF+GG  +L QM +QS +   W    G+  K  L + SI FD++FF QHF LY  
Sbjct: 300 GNVLLDFTGGSFSLLQMFLQSYNNDQWTLIFGDPTKFGLGIFSIIFDVVFFIQHFCLYRK 359

[Close]

BLAST of Chy6G120090 vs. ExPASy Swiss-Prot
Match: O60931 (Cystinosin OS=Homo sapiens OX=9606 GN=CTNS PE=1 SV=2)

HSP 1 Score: 127.1 bits (318), Expect = 2.5e-28
Identity = 79/238 (33.19%), Postives = 119/238 (50.00%), Query Frame = 0


Query: 6   SISMEILYGVLGWISIVCWALASYPQMI-------------------------------- 65
           S ++ I+  V+GWI  V W+++ YPQ+I                                
Sbjct: 120 SSAISIINQVIGWIYFVAWSISFYPQVIMNWRRKSVIGLSFDFVALNLTGFVAYSVFNIG 179

Query: 66  --------------------PVALSDVFFPFHSIILIFVVSVQIVFFDRGSQKVSKASIA 125
                               PV  +DVFF  H+++L  ++ VQ   ++RG Q+VS  +I 
Sbjct: 180 LLWVPYIKEQFLLKYPNGVNPVNSNDVFFSLHAVVLTLIIIVQCCLYERGGQRVSWPAIG 239

Query: 126 ILVAVWFFAGACFFM-ALPTHSWLWLVSIFNSIQVFMTFIKYSPQAFLNFTRKSTVGFSI 185
            LV  W FA     + A+   +WL  +  F+ I++ +T +KY PQA++NF  KST G+SI
Sbjct: 240 FLVLAWLFAFVTMIVAAVGVTTWLQFLFCFSYIKLAVTLVKYFPQAYMNFYYKSTEGWSI 299

Query: 186 GNIVLDFSGGVATLAQMSVQSVDQGSWVNFLGNIGKPLLALVSIAFDLIFFYQHFVLY 191
           GN++LDF+GG  +L QM +QS +   W    G+  K  L + SI FD++FF QHF LY
Sbjct: 300 GNVLLDFTGGSFSLLQMFLQSYNNDQWTLIFGDPTKFGLGVFSIVFDVVFFIQHFCLY 357

[Close]

BLAST of Chy6G120090 vs. ExPASy Swiss-Prot
Match: P57757 (Cystinosin OS=Mus musculus OX=10090 GN=Ctns PE=1 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 3.1e-26
Identity = 69/170 (40.59%), Postives = 101/170 (59.41%), Query Frame = 0


Query: 26  LASYPQMI-PVALSDVFFPFHSIILIFVVSVQIVFFDRGSQKVSKASIAILVAVWFFAGA 85
           L  YP  + PV  +D FF  H++ L  +V +Q   ++RG+Q+VS  SI  LV  W F   
Sbjct: 191 LLKYPNGVNPVDSNDAFFSLHAVALTLIVILQCCLYERGNQRVSWPSIGFLVLAWLFVLV 250

Query: 86  CFFM-ALPTHSWLWLVSIFNSIQVFMTFIKYSPQAFLNFTRKSTVGFSIGNIVLDFSGGV 145
              + A+   +WL  +  F+ I++ +T IKY PQA++NF  KST G+SIG ++LDF+GG 
Sbjct: 251 TMIVAAVGITTWLQFLFCFSYIKLIITLIKYFPQAYMNFYYKSTKGWSIGGVLLDFTGGS 310

Query: 146 ATLAQMSVQSVDQGSWVNFLGNIGKPLLALVSIAFDLIFFYQHFVLYHIK 194
            +L QM +QS +   W    G+  K  L + +I FD++FF QHF LY  K
Sbjct: 311 FSLLQMFLQSYNNDQWTLIFGDPTKFGLGVFTIFFDVVFFIQHFYLYRKK 360

[Close]

BLAST of Chy6G120090 vs. ExPASy TrEMBL
Match: A0A0A0LB92 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G596240 PE=4 SV=1)

HSP 1 Score: 412.5 bits (1059), Expect = 1.1e-111
Identity = 223/278 (80.22%), Postives = 224/278 (80.58%), Query Frame = 0


Query: 1   MSSWNSISMEILYGVLGWISIVCWALASYP------------------------------ 60
           MSSWNSISMEILYGVLGWISI+CWALASYP                              
Sbjct: 1   MSSWNSISMEILYGVLGWISILCWALASYPQVILNFRRKSVVGLSFDYLILNFTKQSSYL 60

Query: 61  -----------------------QMIPVALSDVFFPFHSIILIFVVSVQIVFFDRGSQKV 120
                                  QMIPVALSDVFFPFHSIILI VVSVQIVFFDRGSQKV
Sbjct: 61  IYNATLFFSTTVQKQYFDKYGYDQMIPVALSDVFFPFHSIILILVVSVQIVFFDRGSQKV 120

Query: 121 SKASIAILVAVWFFAGACFFMALPTHSWLWLVSIFNSIQVFMTFIKYSPQAFLNFTRKST 180
           SKASIAILVAVWFFAGACFFMALPTHSWLWLVSIFNSIQVFMTFIKYSPQAFLNFTRKST
Sbjct: 121 SKASIAILVAVWFFAGACFFMALPTHSWLWLVSIFNSIQVFMTFIKYSPQAFLNFTRKST 180

Query: 181 VGFSIGNIVLDFSGGVATLAQMSVQSVDQGSWVNFLGNIGKPLLALVSIAFDLIFFYQHF 226
           VGFSIGNIVLDFSGGVATLAQMSVQSVDQGSWVNFLGNIGKPLLALVSIAFDLIFFYQHF
Sbjct: 181 VGFSIGNIVLDFSGGVATLAQMSVQSVDQGSWVNFLGNIGKPLLALVSIAFDLIFFYQHF 240

[Close]

BLAST of Chy6G120090 vs. ExPASy TrEMBL
Match: A0A1S4DYQ8 (cystinosin homolog isoform X1 OS=Cucumis melo OX=3656 GN=LOC103491742 PE=4 SV=1)

HSP 1 Score: 364.8 bits (935), Expect = 2.7e-97
Identity = 190/198 (95.96%), Postives = 192/198 (96.97%), Query Frame = 0


Query: 32  MIPVALSDVFFPFHSIILIFVVSVQIVFFDRGSQKVSKASIAILVAVWFFAGACFFMALP 91
           MIPVALSDVFFPFHSIILIFVVSVQI+FFDRGSQKVSKA+IAILVAVWFFAGACFFMALP
Sbjct: 31  MIPVALSDVFFPFHSIILIFVVSVQIIFFDRGSQKVSKAAIAILVAVWFFAGACFFMALP 90

Query: 92  THSWLWLVSIFNSIQVFMTFIKYSPQAFLNFTRKSTVGFSIGNIVLDFSGGVATLAQMSV 151
           THSWLWLVSIFNSIQVFMT IKYSPQAFLNFTRKSTVGFSIGNIVLDFSGGVATLAQMSV
Sbjct: 91  THSWLWLVSIFNSIQVFMTVIKYSPQAFLNFTRKSTVGFSIGNIVLDFSGGVATLAQMSV 150

Query: 152 QSVDQGSWVNFLGNIGKPLLAL----VSIAFDLIFFYQHFVLYHIKASRVSFQRDPESTD 211
           QSVDQGSWVNFLGNIGKPLLAL    VSIAFDLIFFYQHFVLYHIKASRVSFQRDPESTD
Sbjct: 151 QSVDQGSWVNFLGNIGKPLLALTVLQVSIAFDLIFFYQHFVLYHIKASRVSFQRDPESTD 210

Query: 212 SEPLIKDSDHLQGIGTTS 226
           SEPLIKDSDHLQGI TTS
Sbjct: 211 SEPLIKDSDHLQGIATTS 228

[Close]

BLAST of Chy6G120090 vs. ExPASy TrEMBL
Match: A0A1S4DY01 (cystinosin homolog isoform X2 OS=Cucumis melo OX=3656 GN=LOC103491742 PE=4 SV=1)

HSP 1 Score: 364.8 bits (935), Expect = 2.7e-97
Identity = 190/198 (95.96%), Postives = 192/198 (96.97%), Query Frame = 0


Query: 32  MIPVALSDVFFPFHSIILIFVVSVQIVFFDRGSQKVSKASIAILVAVWFFAGACFFMALP 91
           MIPVALSDVFFPFHSIILIFVVSVQI+FFDRGSQKVSKA+IAILVAVWFFAGACFFMALP
Sbjct: 1   MIPVALSDVFFPFHSIILIFVVSVQIIFFDRGSQKVSKAAIAILVAVWFFAGACFFMALP 60

Query: 92  THSWLWLVSIFNSIQVFMTFIKYSPQAFLNFTRKSTVGFSIGNIVLDFSGGVATLAQMSV 151
           THSWLWLVSIFNSIQVFMT IKYSPQAFLNFTRKSTVGFSIGNIVLDFSGGVATLAQMSV
Sbjct: 61  THSWLWLVSIFNSIQVFMTVIKYSPQAFLNFTRKSTVGFSIGNIVLDFSGGVATLAQMSV 120

Query: 152 QSVDQGSWVNFLGNIGKPLLAL----VSIAFDLIFFYQHFVLYHIKASRVSFQRDPESTD 211
           QSVDQGSWVNFLGNIGKPLLAL    VSIAFDLIFFYQHFVLYHIKASRVSFQRDPESTD
Sbjct: 121 QSVDQGSWVNFLGNIGKPLLALTVLQVSIAFDLIFFYQHFVLYHIKASRVSFQRDPESTD 180

Query: 212 SEPLIKDSDHLQGIGTTS 226
           SEPLIKDSDHLQGI TTS
Sbjct: 181 SEPLIKDSDHLQGIATTS 198

[Close]

BLAST of Chy6G120090 vs. ExPASy TrEMBL
Match: A0A6J1DN06 (cystinosin homolog OS=Momordica charantia OX=3673 GN=LOC111021514 PE=4 SV=1)

HSP 1 Score: 336.7 bits (862), Expect = 7.7e-89
Identity = 175/274 (63.87%), Postives = 199/274 (72.63%), Query Frame = 0


Query: 1   MSSWNSISMEILYGVLGWISIVCWALASYP------------------------------ 60
           M+SWNS+ +EI+Y VLGW SI+CW +A YP                              
Sbjct: 1   MASWNSVPLEIVYEVLGWSSIICWGVAGYPQVILNFRRKSVVGFSFDYLILNFTKQSSYL 60

Query: 61  -----------------------QMIPVALSDVFFPFHSIILIFVVSVQIVFFDRGSQKV 120
                                  QMIPVALSDV FP HS++LIFV SVQI F +RG+QK+
Sbjct: 61  IYNVSLFFSAAVQRQYFDKYGYDQMIPVALSDVIFPIHSLLLIFVFSVQIAFSERGNQKL 120

Query: 121 SKASIAILVAVWFFAGACFFMALPTHSWLWLVSIFNSIQVFMTFIKYSPQAFLNFTRKST 180
           SK +IAI   VWFFA ACFF+ALPTHSWLWLVSIFN+IQVFMT IKYSPQAF+NFTRKST
Sbjct: 121 SKIAIAIFAGVWFFAAACFFIALPTHSWLWLVSIFNTIQVFMTIIKYSPQAFMNFTRKST 180

Query: 181 VGFSIGNIVLDFSGGVATLAQMSVQSVDQGSWVNFLGNIGKPLLALVSIAFDLIFFYQHF 222
           VGFSIGN+VLDF+GGVA+LAQMSVQS+DQGSWVNF GNIGKPLLAL+SI FDLIFFYQHF
Sbjct: 181 VGFSIGNVVLDFTGGVASLAQMSVQSIDQGSWVNFFGNIGKPLLALISIMFDLIFFYQHF 240

[Close]

BLAST of Chy6G120090 vs. ExPASy TrEMBL
Match: A0A6J1EJ63 (cystinosin homolog OS=Cucurbita moschata OX=3662 GN=LOC111435077 PE=4 SV=1)

HSP 1 Score: 324.3 bits (830), Expect = 4.0e-85
Identity = 174/278 (62.59%), Postives = 196/278 (70.50%), Query Frame = 0


Query: 1   MSSWNSISMEILYGVLGWISIVCWALASYP------------------------------ 60
           M+SWNS+ MEILY +LGW +I+CWALASYP                              
Sbjct: 33  MASWNSVPMEILYQLLGWSAIICWALASYPQIILNFWRKSVVGLSFDFVMLNFTKQSSYL 92

Query: 61  -----------------------QMIPVALSDVFFPFHSIILIFVVSVQIVFFDRGSQKV 120
                                  QMIPVALSDVFFP HSI+LIF+VSVQI  F+ G QKV
Sbjct: 93  IYNASLFFSATVQRQYFEKYGFDQMIPVALSDVFFPSHSILLIFIVSVQIFLFECGDQKV 152

Query: 121 SKASIAILVAVWFFAGACFFMALPTHSWLWLVSIFNSIQVFMTFIKYSPQAFLNFTRKST 180
           S +++AI  AVW FA ACFF+ALPTHSWLWLVS+FNSIQV MT IKYSPQAFLNFTRKST
Sbjct: 153 SNSAVAIFAAVWVFAAACFFIALPTHSWLWLVSMFNSIQVLMTVIKYSPQAFLNFTRKST 212

Query: 181 VGFSIGNIVLDFSGGVATLAQMSVQSVDQGSWVNFLGNIGKPLLALVSIAFDLIFFYQHF 226
           +GFSI  +VLDF GGVATL QM VQS+DQGSWVNF GNIGKPLLA VSI FDLIFFYQHF
Sbjct: 213 MGFSIHTVVLDFIGGVATLTQMGVQSIDQGSWVNFFGNIGKPLLASVSIVFDLIFFYQHF 272

[Close]

BLAST of Chy6G120090 vs. NCBI nr
Match: XP_004145688.1 (cystinosin homolog isoform X2 [Cucumis sativus] >KGN58224.1 hypothetical protein Csa_017462 [Cucumis sativus])

HSP 1 Score: 412 bits (1059), Expect = 1.14e-143
Identity = 223/278 (80.22%), Postives = 224/278 (80.58%), Query Frame = 0


Query: 1   MSSWNSISMEILYGVLGWISIVCWALASYPQ----------------------------- 60
           MSSWNSISMEILYGVLGWISI+CWALASYPQ                             
Sbjct: 1   MSSWNSISMEILYGVLGWISILCWALASYPQVILNFRRKSVVGLSFDYLILNFTKQSSYL 60

Query: 61  ------------------------MIPVALSDVFFPFHSIILIFVVSVQIVFFDRGSQKV 120
                                   MIPVALSDVFFPFHSIILI VVSVQIVFFDRGSQKV
Sbjct: 61  IYNATLFFSTTVQKQYFDKYGYDQMIPVALSDVFFPFHSIILILVVSVQIVFFDRGSQKV 120

Query: 121 SKASIAILVAVWFFAGACFFMALPTHSWLWLVSIFNSIQVFMTFIKYSPQAFLNFTRKST 180
           SKASIAILVAVWFFAGACFFMALPTHSWLWLVSIFNSIQVFMTFIKYSPQAFLNFTRKST
Sbjct: 121 SKASIAILVAVWFFAGACFFMALPTHSWLWLVSIFNSIQVFMTFIKYSPQAFLNFTRKST 180

Query: 181 VGFSIGNIVLDFSGGVATLAQMSVQSVDQGSWVNFLGNIGKPLLALVSIAFDLIFFYQHF 225
           VGFSIGNIVLDFSGGVATLAQMSVQSVDQGSWVNFLGNIGKPLLALVSIAFDLIFFYQHF
Sbjct: 181 VGFSIGNIVLDFSGGVATLAQMSVQSVDQGSWVNFLGNIGKPLLALVSIAFDLIFFYQHF 240

[Close]

BLAST of Chy6G120090 vs. NCBI nr
Match: XP_038884293.1 (cystinosin homolog isoform X7 [Benincasa hispida])

HSP 1 Score: 393 bits (1010), Expect = 1.10e-136
Identity = 207/249 (83.13%), Postives = 213/249 (85.54%), Query Frame = 0


Query: 1   MSSWNSISMEILYGVLGWISIVCWALASYPQ------------------------MIPVA 60
           M SWNSISMEI+Y VLGWISI+CWALASYPQ                        MIPVA
Sbjct: 1   MGSWNSISMEIIYQVLGWISIICWALASYPQVILNFRRKSSTVQRQYFDKYGYDQMIPVA 60

Query: 61  LSDVFFPFHSIILIFVVSVQIVFFDRGSQKVSKASIAILVAVWFFAGACFFMALPTHSWL 120
           LSDVFFPFHSI+LI VVSVQIVFFDRG+QKVSK SIAI VAVWFFA ACFFMALPTHSWL
Sbjct: 61  LSDVFFPFHSILLISVVSVQIVFFDRGNQKVSKTSIAIFVAVWFFAAACFFMALPTHSWL 120

Query: 121 WLVSIFNSIQVFMTFIKYSPQAFLNFTRKSTVGFSIGNIVLDFSGGVATLAQMSVQSVDQ 180
           WLVSIFNSIQVFMTFIKYSPQAFLNFTRKSTVGFSIGNIVLDF+GGV TLAQMSVQS+DQ
Sbjct: 121 WLVSIFNSIQVFMTFIKYSPQAFLNFTRKSTVGFSIGNIVLDFTGGVGTLAQMSVQSIDQ 180

Query: 181 GSWVNFLGNIGKPLLALVSIAFDLIFFYQHFVLYHIKASRVSFQRDPESTDSEPLIKDSD 225
           GSWVNF GNIGKPLLALVSI FDLIFFYQHFVLYHIKASRVSFQRDPEST  EPLIKDSD
Sbjct: 181 GSWVNFFGNIGKPLLALVSIGFDLIFFYQHFVLYHIKASRVSFQRDPEST--EPLIKDSD 240

[Close]

BLAST of Chy6G120090 vs. NCBI nr
Match: XP_011651580.1 (cystinosin homolog isoform X1 [Cucumis sativus] >XP_011651581.1 cystinosin homolog isoform X1 [Cucumis sativus])

HSP 1 Score: 392 bits (1006), Expect = 5.87e-135
Identity = 223/320 (69.69%), Postives = 224/320 (70.00%), Query Frame = 0


Query: 1   MSSWNSISMEILYGVLGWISIVCWALASYPQ----------------------------- 60
           MSSWNSISMEILYGVLGWISI+CWALASYPQ                             
Sbjct: 1   MSSWNSISMEILYGVLGWISILCWALASYPQVILNFRRKSVVGLSFDYLILNFTKQSSYL 60

Query: 61  ------------------------MIPVALSDVFFPFHSIILIFVVSVQIVFFDRGSQKV 120
                                   MIPVALSDVFFPFHSIILI VVSVQIVFFDRGSQKV
Sbjct: 61  IYNATLFFSTTVQKQYFDKYGYDQMIPVALSDVFFPFHSIILILVVSVQIVFFDRGSQKV 120

Query: 121 SKASIAILVAVWFFAGACFFMALPTHSWLWLVSIFNSIQVFMTFIKYSPQAFLNFTRKST 180
           SKASIAILVAVWFFAGACFFMALPTHSWLWLVSIFNSIQVFMTFIKYSPQAFLNFTRKST
Sbjct: 121 SKASIAILVAVWFFAGACFFMALPTHSWLWLVSIFNSIQVFMTFIKYSPQAFLNFTRKST 180

Query: 181 VGFSIGNIVLDFSGGVATLAQMSVQSVDQG------------------------------ 225
           VGFSIGNIVLDFSGGVATLAQMSVQSVDQG                              
Sbjct: 181 VGFSIGNIVLDFSGGVATLAQMSVQSVDQGQILKASWGMRCVQFGEIFWKRGIIEFVKIW 240

[Close]

BLAST of Chy6G120090 vs. NCBI nr
Match: XP_038884260.1 (cystinosin homolog isoform X3 [Benincasa hispida])

HSP 1 Score: 382 bits (981), Expect = 8.03e-132
Identity = 207/278 (74.46%), Postives = 213/278 (76.62%), Query Frame = 0


Query: 1   MSSWNSISMEILYGVLGWISIVCWALASYPQ----------------------------- 60
           M SWNSISMEI+Y VLGWISI+CWALASYPQ                             
Sbjct: 1   MGSWNSISMEIIYQVLGWISIICWALASYPQVILNFRRKSVVGLSFDYVMLNCTKQSSYL 60

Query: 61  ------------------------MIPVALSDVFFPFHSIILIFVVSVQIVFFDRGSQKV 120
                                   MIPVALSDVFFPFHSI+LI VVSVQIVFFDRG+QKV
Sbjct: 61  IYNATLFFSSTVQRQYFDKYGYDQMIPVALSDVFFPFHSILLISVVSVQIVFFDRGNQKV 120

Query: 121 SKASIAILVAVWFFAGACFFMALPTHSWLWLVSIFNSIQVFMTFIKYSPQAFLNFTRKST 180
           SK SIAI VAVWFFA ACFFMALPTHSWLWLVSIFNSIQVFMTFIKYSPQAFLNFTRKST
Sbjct: 121 SKTSIAIFVAVWFFAAACFFMALPTHSWLWLVSIFNSIQVFMTFIKYSPQAFLNFTRKST 180

Query: 181 VGFSIGNIVLDFSGGVATLAQMSVQSVDQGSWVNFLGNIGKPLLALVSIAFDLIFFYQHF 225
           VGFSIGNIVLDF+GGV TLAQMSVQS+DQGSWVNF GNIGKPLLALVSI FDLIFFYQHF
Sbjct: 181 VGFSIGNIVLDFTGGVGTLAQMSVQSIDQGSWVNFFGNIGKPLLALVSIGFDLIFFYQHF 240

[Close]

BLAST of Chy6G120090 vs. NCBI nr
Match: XP_038884253.1 (cystinosin homolog isoform X2 [Benincasa hispida])

HSP 1 Score: 377 bits (969), Expect = 5.59e-130
Identity = 207/279 (74.19%), Postives = 213/279 (76.34%), Query Frame = 0


Query: 1   MSSWNSISMEILYGVLGWISIVCWALASYPQ------------------------MIPVA 60
           M SWNSISMEI+Y VLGWISI+CWALASYPQ                        MIPVA
Sbjct: 1   MGSWNSISMEIIYQVLGWISIICWALASYPQVILNFRRKSSTVQRQYFDKYGYDQMIPVA 60

Query: 61  LSDVFFPFHSIILIFVVSVQIVFFD------------------------------RGSQK 120
           LSDVFFPFHSI+LI VVSVQIVFFD                              RG+QK
Sbjct: 61  LSDVFFPFHSILLISVVSVQIVFFDVSGLFSFGFVSCFGSIRVTILHSIDWILVQRGNQK 120

Query: 121 VSKASIAILVAVWFFAGACFFMALPTHSWLWLVSIFNSIQVFMTFIKYSPQAFLNFTRKS 180
           VSK SIAI VAVWFFA ACFFMALPTHSWLWLVSIFNSIQVFMTFIKYSPQAFLNFTRKS
Sbjct: 121 VSKTSIAIFVAVWFFAAACFFMALPTHSWLWLVSIFNSIQVFMTFIKYSPQAFLNFTRKS 180

Query: 181 TVGFSIGNIVLDFSGGVATLAQMSVQSVDQGSWVNFLGNIGKPLLALVSIAFDLIFFYQH 225
           TVGFSIGNIVLDF+GGV TLAQMSVQS+DQGSWVNF GNIGKPLLALVSI FDLIFFYQH
Sbjct: 181 TVGFSIGNIVLDFTGGVGTLAQMSVQSIDQGSWVNFFGNIGKPLLALVSIGFDLIFFYQH 240

[Close]

BLAST of Chy6G120090 vs. TAIR 10
Match: AT5G40670.1 (PQ-loop repeat family protein / transmembrane family protein )

HSP 1 Score: 230.7 bits (587), Expect = 1.2e-60
Identity = 127/270 (47.04%), Postives = 165/270 (61.11%), Query Frame = 0


Query: 1   MSSWNSISMEILYGVLGWISIVCWALASYPQ----------------------------- 60
           M+SWNSI +EI Y ++GWI+   W+++ YPQ                             
Sbjct: 1   MASWNSIPLEISYEIVGWIAFASWSISFYPQLILNFRRRSVVGLNFDFVMLNLTKHSSYM 60

Query: 61  ------------------------MIPVALSDVFFPFHSIILIFVVSVQIVFFDRGSQKV 120
                                   MIPVA +DV F  H++++  V   QI  ++RG QKV
Sbjct: 61  IYNVCLYFSPVIQKQYFDTYGDKEMIPVAANDVAFSIHAVVMTAVTLFQIFIYERGPQKV 120

Query: 121 SKASIAILVAVWFFAGACFFMALPTHSWLWLVSIFNSIQVFMTFIKYSPQAFLNFTRKST 180
           S+ +I I+V VW FA  CFF+ALPTHSWLWL+SIFNSIQVFMT +KY PQA +NFTRKST
Sbjct: 121 SRLAIGIVVVVWGFAAICFFIALPTHSWLWLISIFNSIQVFMTCVKYIPQAKMNFTRKST 180

Query: 181 VGFSIGNIVLDFSGGVATLAQMSVQSVDQGSWVNFLGNIGKPLLALVSIAFDLIFFYQHF 218
           VG+SIGNI+LDF+GG+A   QM +QS+DQ SW NF GN+GK LL+L+SI FD++F +QH+
Sbjct: 181 VGWSIGNILLDFTGGLANYLQMVIQSIDQNSWKNFYGNMGKTLLSLISIFFDILFMFQHY 240

The following BLAST results are available for this feature:

BLAST of Chy6G120090 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P57758	1.6e-59	47.04	Cystinosin homolog OS=Arabidopsis thaliana OX=3702 GN=At5g40670 PE=2 SV=1	[more]
Q54WT7	7.1e-31	32.78	Cystinosin homolog OS=Dictyostelium discoideum OX=44689 GN=ctns PE=3 SV=1	[more]
A7MB63	1.5e-28	43.09	Cystinosin OS=Bos taurus OX=9913 GN=CTNS PE=2 SV=1	[more]
O60931	2.5e-28	33.19	Cystinosin OS=Homo sapiens OX=9606 GN=CTNS PE=1 SV=2	[more]
P57757	3.1e-26	40.59	Cystinosin OS=Mus musculus OX=10090 GN=Ctns PE=1 SV=1	[more]

BLAST of Chy6G120090 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LB92	1.1e-111	80.22	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G596240 PE=4 SV=1	[more]
A0A1S4DYQ8	2.7e-97	95.96	cystinosin homolog isoform X1 OS=Cucumis melo OX=3656 GN=LOC103491742 PE=4 SV=1	[more]
A0A1S4DY01	2.7e-97	95.96	cystinosin homolog isoform X2 OS=Cucumis melo OX=3656 GN=LOC103491742 PE=4 SV=1	[more]
A0A6J1DN06	7.7e-89	63.87	cystinosin homolog OS=Momordica charantia OX=3673 GN=LOC111021514 PE=4 SV=1	[more]
A0A6J1EJ63	4.0e-85	62.59	cystinosin homolog OS=Cucurbita moschata OX=3662 GN=LOC111435077 PE=4 SV=1	[more]

BLAST of Chy6G120090 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004145688.1	1.14e-143	80.22	cystinosin homolog isoform X2 [Cucumis sativus] >KGN58224.1 hypothetical protein...	[more]
XP_038884293.1	1.10e-136	83.13	cystinosin homolog isoform X7 [Benincasa hispida]	[more]
XP_011651580.1	5.87e-135	69.69	cystinosin homolog isoform X1 [Cucumis sativus] >XP_011651581.1 cystinosin homol...	[more]
XP_038884260.1	8.03e-132	74.46	cystinosin homolog isoform X3 [Benincasa hispida]	[more]
XP_038884253.1	5.59e-130	74.19	cystinosin homolog isoform X2 [Benincasa hispida]	[more]

BLAST of Chy6G120090 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G40670.1	1.2e-60	47.04	PQ-loop repeat family protein / transmembrane family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006603	PQ-loop repeat	SMART	SM00679	ctns	coord: 112..143 e-value: 5.1E-5 score: 32.7
IPR006603	PQ-loop repeat	PFAM	PF04193	PQ-loop	coord: 99..155 e-value: 1.1E-13 score: 50.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 202..225
None	No IPR available	PANTHER	PTHR13131:SF9	CYSTINOSIN-LIKE PROTEIN	coord: 29..219
None	No IPR available	PANTHER	PTHR13131:SF9	CYSTINOSIN-LIKE PROTEIN	coord: 1..33
IPR005282	Lysosomal cystine transporter	PANTHER	PTHR13131	CYSTINOSIN	coord: 1..33
IPR005282	Lysosomal cystine transporter	PANTHER	PTHR13131	CYSTINOSIN	coord: 29..219

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy6G120090.1	Chy6G120090.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015811	L-cystine transport
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005774	vacuolar membrane
molecular_function	GO:0015184	L-cystine transmembrane transporter activity