Chy6G119980 (gene) Cucumber (hystrix) v1

Overview
NameChy6G119980
Typegene
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionCysteine-rich and transmembrane domain-containing protein A-like
LocationchrH06: 16013336 .. 16016481 (-)
RNA-Seq ExpressionChy6G119980
SyntenyChy6G119980
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATCCTTAACATAAACTCGTGGTTTATACTTGGAAAAGTTTAACTTTAATCTCATGTTTAAGAATAAACATTCAAATTCATTTCTTCACTCACAACTTGTAGCCCAATTTCTTAGCTCAAGAAATTCATCTTTCCTCATTCTTAGAAAATATTAAGAAAACATACCGTCCTCAACGCTTAACATTTGTGGCGGCCTACCACTTACTCTTTGGAGGTTTTCAAGACTCTCTTTTGCCGCTTAGGACATGCCCTCCAGAGGTTATTGATATCCATTGGCCGCCTAGCACCAACACTTAGCCAAATTTTGAACTTCCTTTTCTTCTTTCATTTTTTCTTTGGCCGCCCACTTGAATCCTCAAACTCAACATAGCCACAACTCACTTTGGGTAATCCAAGGATGTCTAGCACATATGTTTGGCATAATTCCTTTGAAGATTTTTCCATTGATTATCTTGTTTAAAAGAATTTTGCAAGCAACTGAGTTTTGGAGGCTTCTATTGGACAACTATATCATCGTCTTCTACAGCCACAATGCGATTTTTCACCTCCTCCATTAAACATAATTTCTCAAGCATCTTGCTCATAGGATCCATTGAGGATCTCAACCTCCCAACCAGTTGATCCCTACTACCAGCACAAAGGCTTTCCAAATGCTCACAACCCCATAGCTCCAATTTTTGTATTTGTTAAAAAGATTAAGGGTTAAATTTGTAATTTAAATAGTTATAGGTGGGAATATTTGGGACCATTATGCAATTATTTTAAGAAAATATGATTGGACATGTAATGTAAATATCCAAATTAAAATAAATGCTTCCAACTAGAACTTGTGAGAAGGGAATATACCCAATTACCCACCACCTTAAGCAATTCTGCTGTTATCGTTTTTATCGTCTTTCTTCTTCCTCGTCTCCAAATTTCTCCATTTCCATTCCCAAAGAATTATGAGTTACCCTTACGGCTACAACCATCCTCCGCCGGAAACCTACCCTCCTCCTGGTCAGATCTCCTTCTTTTATATTTCTCTCTTCTTCTTTTGATTTTGCACTTCATCTCATTCTTTCTTTCTTTTCTTCTATAGGGTACCCTCCACCGCAGCCTGGATATCCCGGCTATCAGCCACCCCCGCCGCCGCCCCATCAAGGCTATCAAGGCTATTTCTATGATGGGTATCAACCATCGGCGCCCCCTCCCCCTCCTCCTCCACCGCCTTGTCATCATCAGCACTATCACTACGATGATCGAAATGATTGTTCCTCCTTCCTTCATGGATGGTAGGCTTTCCCCTATAATTTCTTCAATTACTATTTGGATTATCATTTTGTTGATCCCATTTTCATTTGTTTGTTTCACTTTCTGAATTGTGATCTTGTTGATGCATTCATTTTCTGTGTTGTGGGAATTCATTGGATTTGTGAAATTAATGTTTTCTGGTTTTTTTGGGATTTCGAAACTGGCAATTCAATTTTCCGATCTTCTTTCAATTTGATACCCATCTTTCTCTTACAATGGAATATATATGTTCAGTGAAGGCCGACACAATGTGGCTGTCCCTTGGTAATTTTTCAATTCATGTTTGAACTACATTTTTTAAATTTCTTGCTCATACATCCAATTATGTAGGATCATAAGCGACATTATTGTTCCATCCCTATTGAACAATGCCTTCTTGCAATAGGCTTTTGTGCTGAGGAGTTATTTAAACCCCATTTGATATCCATTTAGTTTTTCGGGTTTGGAAAATTTTGCTGGTTTTATTACAAGTTCTTTACAATAATGTTCCTTCCTTGGGAAACATTGAGTTCTTAACTACTTTTTCAGTTTTCAAAACTTTGGCTTCAATTTTGAAAACATTTGTAAAGAGTAGAAAAAGAAAACCAAAGAAATCCATTGCTTAAAGTGGTATTTATAAGCGTAACTTTCATAAAGCGAAATGAAAATTATCAAATGGGATCTAACAATTTCAATTTGTTTGGATGCACTCTATCTAAGGACATTACAGAATGGAAGTGGCTATCCTGAACCAATCAAAATCATCTTTGTTCTTGTATAGTGAACTAAGCAGTATTTTTCTTAGTTTAGTCAGCAATAGGGAAAAGAAAATTGGTCGTGTAATGTTTGATATGGGTGCACAGAGCATCTGATGCTTCTCCTTTTATGCTAGTTTGTGATCCAATCCTTTCTTCCTCTTTTTATGTTGTGGCTTTGATAAAACTATTGAATTGGACTATCTGTTTGTCAAGTTATTGATGGGACTTTAACATTCTGATTTTTGCTAATGTGGGTCCATTATCTTTAATACTGCCCCTTTGTAATTTGGAAATCAATTTTGCTTGTTCCTTATCTTAATACCCATGTTTATAGGCGTTTTAATGTTCTTGTTGTGCATGAGATAGCTCAAGAAGCCCACTCAATCGGGCGTGTTTTATTGGCTTGCTCACTTTCCTTGTTGAGTGGAGTACTTGTGTAGAACTTCGATGCTTCCTTTTTTGGGTTCTTGAGGTTCAATGCTTGTCTTTTCCAAAAATAAAGAAACGAACATTTAACAAGTTTTCTTTCTTCTAACGGATAATGTTTTAGTAATTACAGATGCTTGTGCTTTTCCTCGATCAAACTAAGAAATAATGTCTAAGAATTGTGAAATAAGTTCCATTCAGTAAAGTTTTCTTTCTTATTTCTTTGTTCTTGGTTCCTTTTTAGCGAGTGTCCAGTGACTTGACTTTTGATTATAAGAAACATTAAACTTATTGTTCTCTCGTGCAGCTTAGCTACACTTTGTTGTTGTTGTATGTTGGAGGAGTGCTTGGCCTGCTTCCGATAGACGATTGCAAAATAGTGTTTCTTCTTCAGTCGGTTCAGCCATGCTGTGTTCGTGTCTTCTATTGTGCTGTGTTCATGTCTTCTATTATGAATTGTCGCATCACTTGAAACAAGATTTGTAGTTTCTGGTTTGTGTGATTGCAAACTATATCTGTATTGTTTGATATCTAAATATTCTTATTTACTTTTATACATACCTAAACAAATAGTAGATAATACTATTATAGACTTGGAATCCCTATTGTTGTCATCCATATCAATTTCTTTAAGATTTTGATGCATGGTTTCTGTGGAGCCTTGATACAGAAAGCAGAATATGCTATTTGA

mRNA sequence

ATCCTTAACATAAACTCGTGGTTTATACTTGGAAAACCACAATGCGATTTTTCACCTCCTCCATTAAACATAATTTCTCAAGCATCTTGCTCATAGGATCCATTGAGGATCTCAACCTCCCAACCAGTTGATCCCTACTACCAGCACAAAGGCTTTCCAAATGCACTCGTCTCCAAATTTCTCCATTTCCATTCCCAAAGAATTATGAGTTACCCTTACGGCTACAACCATCCTCCGCCGGAAACCTACCCTCCTCCTGGGTACCCTCCACCGCAGCCTGGATATCCCGGCTATCAGCCACCCCCGCCGCCGCCCCATCAAGGCTATCAAGGCTATTTCTATGATGGGTATCAACCATCGGCGCCCCCTCCCCCTCCTCCTCCACCGCCTTGTCATCATCAGCACTATCACTACGATGATCGAAATGATTGTTCCTCCTTCCTTCATGGATGGCGTTTTAATGTTCTTGTTGTGCATGAGATAGCTCAAGAAGCCCACTCAATCGGGCGTGTTTTATTGGCTTGCTCACTTTCCTTGTTGAGTGGACTTAGCTACACTTTGTTGTTGTTGTATGTTGGAGGAGTGCTTGGCCTGCTTCCGATAGACGATTGCAAAATAGTGTTTCTTCTTCAGTCGGTTCAGCCATGCTGTGTTCGTATTTTGATGCATGGTTTCTGTGGAGCCTTGATACAGAAAGCAGAATATGCTATTTGA

Coding sequence (CDS)

ATCCTTAACATAAACTCGTGGTTTATACTTGGAAAACCACAATGCGATTTTTCACCTCCTCCATTAAACATAATTTCTCAAGCATCTTGCTCATAGGATCCATTGAGGATCTCAACCTCCCAACCAGTTGATCCCTACTACCAGCACAAAGGCTTTCCAAATGCACTCGTCTCCAAATTTCTCCATTTCCATTCCCAAAGAATTATGAGTTACCCTTACGGCTACAACCATCCTCCGCCGGAAACCTACCCTCCTCCTGGGTACCCTCCACCGCAGCCTGGATATCCCGGCTATCAGCCACCCCCGCCGCCGCCCCATCAAGGCTATCAAGGCTATTTCTATGATGGGTATCAACCATCGGCGCCCCCTCCCCCTCCTCCTCCACCGCCTTGTCATCATCAGCACTATCACTACGATGATCGAAATGATTGTTCCTCCTTCCTTCATGGATGGCGTTTTAATGTTCTTGTTGTGCATGAGATAGCTCAAGAAGCCCACTCAATCGGGCGTGTTTTATTGGCTTGCTCACTTTCCTTGTTGAGTGGACTTAGCTACACTTTGTTGTTGTTGTATGTTGGAGGAGTGCTTGGCCTGCTTCCGATAGACGATTGCAAAATAGTGTTTCTTCTTCAGTCGGTTCAGCCATGCTGTGTTCGTATTTTGATGCATGGTTTCTGTGGAGCCTTGATACAGAAAGCAGAATATGCTATTTGA

Protein sequence

ILNINSWFILGKPQCDFSPPPLNIISQASCS*DPLRISTSQPVDPYYQHKGFPNALVSKFLHFHSQRIMSYPYGYNHPPPETYPPPGYPPPQPGYPGYQPPPPPPHQGYQGYFYDGYQPSAPPPPPPPPPCHHQHYHYDDRNDCSSFLHGWRFNVLVVHEIAQEAHSIGRVLLACSLSLLSGLSYTLLLLYVGGVLGLLPIDDCKIVFLLQSVQPCCVRILMHGFCGALIQKAEYAI*
Homology
[Close]
BLAST of Chy6G119980 vs. ExPASy TrEMBL
Match: A0A5A7VHS2 (Cysteine-rich and transmembrane domain-containing protein A-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold550G00060 PE=4 SV=1)

HSP 1 Score: 197.6 bits (501), Expect = 5.9e-47
Identity = 97/119 (81.51%), Postives = 101/119 (84.87%), Query Frame = 0 

Query: 35  LRISTSQPVDPYYQHKGFPNALVSKFLHFH--SQRIMSYPYGYNHPPPETYPPPGYPPPQ 94
           L  S+SQ + P    K      +SKFLHFH  SQRIMSY YGYNHPPPETYPPPGYPPPQ
Sbjct: 13  LPTSSSQRI-PTDSPKALQMHTISKFLHFHFYSQRIMSYSYGYNHPPPETYPPPGYPPPQ 72

Query: 95  PGYPGYQPPPPPPHQGYQGYFYDGYQPSAPPPPPPPPPCHHQHYHYDDRNDCSSFLHGW 152
           PGYPG+QPPPPPPHQGYQGYFYDGYQPSAPPPPPPPPP HHQHYHYDDRNDCSSFLHGW
Sbjct: 73  PGYPGHQPPPPPPHQGYQGYFYDGYQPSAPPPPPPPPPYHHQHYHYDDRNDCSSFLHGW 130

[Close]
BLAST of Chy6G119980 vs. ExPASy TrEMBL
Match: A0A5D3DVB2 (Cysteine-rich and transmembrane domain-containing protein A-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold236G001150 PE=4 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 3.8e-46
Identity = 96/119 (80.67%), Postives = 101/119 (84.87%), Query Frame = 0 

Query: 35  LRISTSQPVDPYYQHKGFPNALVSKFLHFH--SQRIMSYPYGYNHPPPETYPPPGYPPPQ 94
           L  S+SQ + P    K      +SKFLHFH  SQRIMSY YGYN+PPPETYPPPGYPPPQ
Sbjct: 13  LPTSSSQRI-PTDSPKALQMHTISKFLHFHFYSQRIMSYSYGYNNPPPETYPPPGYPPPQ 72

Query: 95  PGYPGYQPPPPPPHQGYQGYFYDGYQPSAPPPPPPPPPCHHQHYHYDDRNDCSSFLHGW 152
           PGYPG+QPPPPPPHQGYQGYFYDGYQPSAPPPPPPPPP HHQHYHYDDRNDCSSFLHGW
Sbjct: 73  PGYPGHQPPPPPPHQGYQGYFYDGYQPSAPPPPPPPPPYHHQHYHYDDRNDCSSFLHGW 130

[Close]
BLAST of Chy6G119980 vs. ExPASy TrEMBL
Match: A0A0A0L8F9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G597340 PE=4 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 1.1e-40
Identity = 82/83 (98.80%), Postives = 82/83 (98.80%), Query Frame = 0 

Query: 69  MSYPYGYNHPPPETYPPPGYPPPQPGYPGYQP-PPPPPHQGYQGYFYDGYQPSAPPPPPP 128
           MSYPYGYNHPPPETYPPPGYPPPQPGYPGYQP PPPPPHQGYQGYFYDGYQPSAPPPPPP
Sbjct: 1   MSYPYGYNHPPPETYPPPGYPPPQPGYPGYQPHPPPPPHQGYQGYFYDGYQPSAPPPPPP 60

Query: 129 PPPCHHQHYHYDDRNDCSSFLHG 151
           PPPCHHQHYHYDDRNDCSSFLHG
Sbjct: 61  PPPCHHQHYHYDDRNDCSSFLHG 83

[Close]
BLAST of Chy6G119980 vs. ExPASy TrEMBL
Match: A0A1S3BP97 (cysteine-rich and transmembrane domain-containing protein A-like OS=Cucumis melo OX=3656 GN=LOC103491722 PE=4 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 2.7e-39
Identity = 79/82 (96.34%), Postives = 80/82 (97.56%), Query Frame = 0 

Query: 69  MSYPYGYNHPPPETYPPPGYPPPQPGYPGYQPPPPPPHQGYQGYFYDGYQPSAPPPPPPP 128
           MSY YGYNHPPPETYPPPGYPPPQPGYPG+QPPPPPPHQGYQGYFYDGYQPSAPPPPPPP
Sbjct: 1   MSYSYGYNHPPPETYPPPGYPPPQPGYPGHQPPPPPPHQGYQGYFYDGYQPSAPPPPPPP 60

Query: 129 PPCHHQHYHYDDRNDCSSFLHG 151
           PP HHQHYHYDDRNDCSSFLHG
Sbjct: 61  PPYHHQHYHYDDRNDCSSFLHG 82

[Close]
BLAST of Chy6G119980 vs. ExPASy TrEMBL
Match: A0A6J1J313 (cysteine-rich and transmembrane domain-containing protein WIH2-like OS=Cucurbita maxima OX=3661 GN=LOC111482221 PE=3 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 2.2e-33
Identity = 74/86 (86.05%), Postives = 76/86 (88.37%), Query Frame = 0 

Query: 69  MSYPYGYNHPPPETYPPPGYPPPQPGYPGYQPPPPPPHQGYQGYFYDGYQPSAPPPP--- 128
           M+YPYGY HPPPETYPPPGY PPQPGYPG+QP PPPPHQGYQGYFYDGY PSAPPPP   
Sbjct: 1   MNYPYGYQHPPPETYPPPGYRPPQPGYPGHQPLPPPPHQGYQGYFYDGYSPSAPPPPPPP 60

Query: 129 -PPPPPCHHQHYHYDDRNDCSSFLHG 151
            PPPPP  HQHYHYDDRNDCSSFLHG
Sbjct: 61  GPPPPPYCHQHYHYDDRNDCSSFLHG 86

[Close]
BLAST of Chy6G119980 vs. NCBI nr
Match: KAA0066894.1 (cysteine-rich and transmembrane domain-containing protein A-like [Cucumis melo var. makuwa])

HSP 1 Score: 197 bits (501), Expect = 8.67e-61
Identity = 97/119 (81.51%), Postives = 101/119 (84.87%), Query Frame = 0 

Query: 35  LRISTSQPVDPYYQHKGFPNALVSKFLHFH--SQRIMSYPYGYNHPPPETYPPPGYPPPQ 94
           L  S+SQ + P    K      +SKFLHFH  SQRIMSY YGYNHPPPETYPPPGYPPPQ
Sbjct: 13  LPTSSSQRI-PTDSPKALQMHTISKFLHFHFYSQRIMSYSYGYNHPPPETYPPPGYPPPQ 72

Query: 95  PGYPGYQPPPPPPHQGYQGYFYDGYQPSAPPPPPPPPPCHHQHYHYDDRNDCSSFLHGW 151
           PGYPG+QPPPPPPHQGYQGYFYDGYQPSAPPPPPPPPP HHQHYHYDDRNDCSSFLHGW
Sbjct: 73  PGYPGHQPPPPPPHQGYQGYFYDGYQPSAPPPPPPPPPYHHQHYHYDDRNDCSSFLHGW 130

[Close]
BLAST of Chy6G119980 vs. NCBI nr
Match: TYK27230.1 (cysteine-rich and transmembrane domain-containing protein A-like [Cucumis melo var. makuwa])

HSP 1 Score: 194 bits (494), Expect = 9.99e-60
Identity = 96/119 (80.67%), Postives = 101/119 (84.87%), Query Frame = 0 

Query: 35  LRISTSQPVDPYYQHKGFPNALVSKFLHFH--SQRIMSYPYGYNHPPPETYPPPGYPPPQ 94
           L  S+SQ + P    K      +SKFLHFH  SQRIMSY YGYN+PPPETYPPPGYPPPQ
Sbjct: 13  LPTSSSQRI-PTDSPKALQMHTISKFLHFHFYSQRIMSYSYGYNNPPPETYPPPGYPPPQ 72

Query: 95  PGYPGYQPPPPPPHQGYQGYFYDGYQPSAPPPPPPPPPCHHQHYHYDDRNDCSSFLHGW 151
           PGYPG+QPPPPPPHQGYQGYFYDGYQPSAPPPPPPPPP HHQHYHYDDRNDCSSFLHGW
Sbjct: 73  PGYPGHQPPPPPPHQGYQGYFYDGYQPSAPPPPPPPPPYHHQHYHYDDRNDCSSFLHGW 130

[Close]
BLAST of Chy6G119980 vs. NCBI nr
Match: XP_004145697.1 (cysteine-rich and transmembrane domain-containing protein WIH2 [Cucumis sativus] >KGN58235.1 hypothetical protein Csa_017475 [Cucumis sativus])

HSP 1 Score: 176 bits (446), Expect = 7.77e-53
Identity = 82/83 (98.80%), Postives = 82/83 (98.80%), Query Frame = 0 

Query: 69  MSYPYGYNHPPPETYPPPGYPPPQPGYPGYQP-PPPPPHQGYQGYFYDGYQPSAPPPPPP 128
           MSYPYGYNHPPPETYPPPGYPPPQPGYPGYQP PPPPPHQGYQGYFYDGYQPSAPPPPPP
Sbjct: 1   MSYPYGYNHPPPETYPPPGYPPPQPGYPGYQPHPPPPPHQGYQGYFYDGYQPSAPPPPPP 60

Query: 129 PPPCHHQHYHYDDRNDCSSFLHG 150
           PPPCHHQHYHYDDRNDCSSFLHG
Sbjct: 61  PPPCHHQHYHYDDRNDCSSFLHG 83

[Close]
BLAST of Chy6G119980 vs. NCBI nr
Match: XP_008450006.1 (PREDICTED: cysteine-rich and transmembrane domain-containing protein A-like [Cucumis melo])

HSP 1 Score: 171 bits (434), Expect = 4.96e-51
Identity = 79/82 (96.34%), Postives = 80/82 (97.56%), Query Frame = 0 

Query: 69  MSYPYGYNHPPPETYPPPGYPPPQPGYPGYQPPPPPPHQGYQGYFYDGYQPSAPPPPPPP 128
           MSY YGYNHPPPETYPPPGYPPPQPGYPG+QPPPPPPHQGYQGYFYDGYQPSAPPPPPPP
Sbjct: 1   MSYSYGYNHPPPETYPPPGYPPPQPGYPGHQPPPPPPHQGYQGYFYDGYQPSAPPPPPPP 60

Query: 129 PPCHHQHYHYDDRNDCSSFLHG 150
           PP HHQHYHYDDRNDCSSFLHG
Sbjct: 61  PPYHHQHYHYDDRNDCSSFLHG 82

[Close]
BLAST of Chy6G119980 vs. NCBI nr
Match: XP_038879833.1 (cysteine-rich and transmembrane domain-containing protein WIH2 [Benincasa hispida])

HSP 1 Score: 163 bits (412), Expect = 1.03e-47
Identity = 77/82 (93.90%), Postives = 79/82 (96.34%), Query Frame = 0 

Query: 69  MSYPYGYNHPPPETYPPPGYPPPQPGYPGYQPPPPPPHQGYQGYFYDGYQPSAPPPPPPP 128
           MSYPYGY+ PPPETYPPPGYPPPQPGYPG+QPPPPPPHQGYQGYFYDGYQPSAPPP PPP
Sbjct: 1   MSYPYGYHQPPPETYPPPGYPPPQPGYPGHQPPPPPPHQGYQGYFYDGYQPSAPPP-PPP 60

Query: 129 PPCHHQHYHYDDRNDCSSFLHG 150
           PP HHQHYHYDDRNDCSSFLHG
Sbjct: 61  PPYHHQHYHYDDRNDCSSFLHG 81

[Close]
BLAST of Chy6G119980 vs. TAIR 10
Match: AT1G12810.1 (proline-rich family protein )

HSP 1 Score: 60.5 bits (145), Expect = 2.2e-09
Identity = 48/93 (51.61%), Postives = 55/93 (59.14%), Query Frame = 0 

Query: 72  PYGY-NHPPPETYPPP-----GYPPPQPGYPGYQPPPPPPHQ-GYQGYFYDG---YQPSA 131
           P GY + PPP  YP P     GYPPPQP Y GY PP   P++ GYQGYF  G   +Q   
Sbjct: 22  PPGYPSAPPPPGYPSPPSHHEGYPPPQP-YGGYPPPSSRPYEGGYQGYFAGGGYPHQHHG 81

Query: 132 PPPPPPP---PPCHHQHYHYDDRND-CSSFLHG 151
           PPPPPPP     CHH H+HY D +  C SF+ G
Sbjct: 82  PPPPPPPQNYDHCHHDHHHYQDSDSGCFSFIRG 113

[Close]
BLAST of Chy6G119980 vs. TAIR 10
Match: AT1G12810.2 (proline-rich family protein )

HSP 1 Score: 60.5 bits (145), Expect = 2.2e-09
Identity = 48/93 (51.61%), Postives = 55/93 (59.14%), Query Frame = 0 

Query: 72  PYGY-NHPPPETYPPP-----GYPPPQPGYPGYQPPPPPPHQ-GYQGYFYDG---YQPSA 131
           P GY + PPP  YP P     GYPPPQP Y GY PP   P++ GYQGYF  G   +Q   
Sbjct: 22  PPGYPSAPPPPGYPSPPSHHEGYPPPQP-YGGYPPPSSRPYEGGYQGYFAGGGYPHQHHG 81

Query: 132 PPPPPPP---PPCHHQHYHYDDRND-CSSFLHG 151
           PPPPPPP     CHH H+HY D +  C SF+ G
Sbjct: 82  PPPPPPPQNYDHCHHDHHHYQDSDSGCFSFIRG 113

[Close]
BLAST of Chy6G119980 vs. TAIR 10
Match: AT5G07740.1 (actin binding )

HSP 1 Score: 43.5 bits (101), Expect = 2.7e-04
Identity = 47/123 (38.21%), Postives = 53/123 (43.09%), Query Frame = 0 

Query: 19   PPPL---NIISQASCS*DPLRISTSQPVDPYYQHKGFPNALVSKFLHFHSQRIMSYPYGY 78
            PPPL   +I    S    PL   +S P  P       P      F + HS  +   P  Y
Sbjct: 918  PPPLPYTSIAPSPSVKILPLHGISSAPSPPV--KTAPPPPPPPPFSNAHSV-LSPPPPSY 977

Query: 79   NHPPPETYPPPGY------PPPQPGYPGYQPPPPPPHQGYQGYFYDGYQPSAPPPPPPPP 133
              PPP   PPP Y      PPP P Y G  PPPPPP  GY           +PPPPPPPP
Sbjct: 978  GSPPPPPPPPPSYGSPPPPPPPPPSY-GSPPPPPPPPPGY----------GSPPPPPPPP 1026

The following BLAST results are available for this feature:
BLAST of Chy6G119980 vs.
Match NameE-valueIdentityDescription
BLAST of Chy6G119980 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7VHS25.9e-4781.51Cysteine-rich and transmembrane domain-containing protein A-like OS=Cucumis melo... [more]
A0A5D3DVB23.8e-4680.67Cysteine-rich and transmembrane domain-containing protein A-like OS=Cucumis melo... [more]
A0A0A0L8F91.1e-4098.80Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G597340 PE=4 SV=1[more]
A0A1S3BP972.7e-3996.34cysteine-rich and transmembrane domain-containing protein A-like OS=Cucumis melo... [more]
A0A6J1J3132.2e-3386.05cysteine-rich and transmembrane domain-containing protein WIH2-like OS=Cucurbita... [more]
BLAST of Chy6G119980 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0066894.18.67e-6181.51cysteine-rich and transmembrane domain-containing protein A-like [Cucumis melo v... [more]
TYK27230.19.99e-6080.67cysteine-rich and transmembrane domain-containing protein A-like [Cucumis melo v... [more]
XP_004145697.17.77e-5398.80cysteine-rich and transmembrane domain-containing protein WIH2 [Cucumis sativus]... [more]
XP_008450006.14.96e-5196.34PREDICTED: cysteine-rich and transmembrane domain-containing protein A-like [Cuc... [more]
XP_038879833.11.03e-4793.90cysteine-rich and transmembrane domain-containing protein WIH2 [Benincasa hispid... [more]
BLAST of Chy6G119980 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G12810.12.2e-0951.61proline-rich family protein [more]
AT1G12810.22.2e-0951.61proline-rich family protein [more]
AT5G07740.12.7e-0438.21actin binding [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 81..101

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Chy6G119980.1Chy6G119980.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005886 plasma membrane