Chy6G119190 (gene) Cucumber (hystrix) v1

Overview


Name	Chy6G119190
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Transposase
Location	chrH06: 14429483 .. 14430998 (+)
RNA-Seq Expression	Chy6G119190
Synteny	Chy6G119190

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATAGAGGATTCACATTCTAGCAGTGAGGATGAAAGGCAAATGATTCCTGAAGTAAGAACTAGATCATTCGTGCCACGTGGCCCAACTACTGTGTCAGAGTTAGCATCAGTAAGAAATTTTGGACAACGGTTGTCCGTTCAATTTAATGAACACGAGCAACCTATAGGAGCCACTTCTAAGAAAATGCAAAGTTACATTGGTGTGTGCTTTCAGCAGCAGTTTCCTGTCACATACAAATCTTGGAAACAAGTTCCGAATGAGTTGAAAGATAAAATCTATGATTGTTATTGGTATGGATTCTATATTTACGTTTTTCATACAATGTAGTTCCCTAAGTCTAAATATGCTTTTGTTTTCTATTGTGTAGATGTCGTTTGAGTTACATCCTAATGCCAAACATTCTATCTTCATGTCTGCATCAAGAAAGTTTCAAACTTTCAAGACCACGCTAACTCGGAAGTATATACTTCTGTTTAAGGATCAACCATCACATCTGCAGTTTCCTCTTAAAATTTAATTACATGTTAACTTTAATATTTTTTTGGTATGTAACTACAAACTAATGCTTTGTACAGGAGTACAGTCGTATTCAAAAGGAAAGAAGGTCAAAATGCGTATACAATCATCAATTTGCTCGTAAGGGATATGGGAATCTTGCCAACAAATTAATCAGTCTTTCTAATTAAATTAAATAATTTATCTTAATATGTGTATGCTAATTAAGTATATATCTTTGGTTGCATAATATAACACGTGATGTTTCCTATTGTTCAACTCTTTGAAAAGAAGCCCGAAAAAGAAAGAACAATGATTATTTTGATAATGCTACTCAAGATTGTGTCTCTCGGATTGTAAGTTTACTTACGATTTACTTATATAAAATATATAATCTTTTGTTAACTTAGCTGATGATGAAAATACTTGTATTGTTTTATAGGATGCATTAGTCACAACACATAAAGATGAGAACATATTGACTGAAGCATTGGGTTCCAAGACGCACGGTGGACGTGTCAGAGGCGTGGGTGGTTTTGTCTCTCAATCACAATATTTCAAAATAGTGAAAGGGAAAGAGGAAATGATAAGTTCTGAAGTTGAAATATGTCATAAAGAAGATGACTCAAGAAGCAAAAGTTACAAAAAGAGTCATAATCACTCGAGATCGTCCATCGAAAGTGTTAACATAGATCTTAATGCCGATGAGGATTTGGGCAACACACCTAGCAACGAAGGAGTAAAGGTAATTAACTTTGTTGTCACTTTTAAAATTTTAATGATATAGGATCAATTGTTCTTAACGATACGTTTAATACTTGTAAAGGGAACACCATGCAAATTGGCTATAGGATCAATTAATAATATCGTTGCAATAGCCACCGTATTTGACGATAACAGTGACTATCCCAATGTTAAAGTTTTGGTGGACTTGTTTACTAGAGGAGATTTTAGTATACCTATTCCAATGAAGGACAAGATAGAGACTTTAAATCAAGCGTTGGGTAACATTATTGAATGA

mRNA sequence

ATAGAGGATTCACATTCTAGCAGTGAGGATGAAAGGCAAATGATTCCTGAAGTAAGAACTAGATCATTCGTGCCACGTGGCCCAACTACTGTGTCAGAGTTAGCATCAGTAAGAAATTTTGGACAACGGTTGTCCGTTCAATTTAATGAACACGAGCAACCTATAGGAGCCACTTCTAAGAAAATGCAAAGTTACATTGGTGTGTGCTTTCAGCAGCAGTTTCCTGTCACATACAAATCTTGGAAACAAGTTCCGAATGAGTTGAAAGATAAAATCTATGATTGTTATTGGATGCATTAGTCACAACACATAAAGATGAGAACATATTGACTGAAGCATTGGGTTCCAAGACGCACGGTGGACGTGTCAGAGGCGTGGGTGGTTTTGTCTCTCAATCACAATATTTCAAAATAGTGAAAGGGAAAGAGGAAATGATAAGTTCTGAAGTTGAAATATGTCATAAAGAAGATGACTCAAGAAGCAAAAGTTACAAAAAGAGTCATAATCACTCGAGATCGTCCATCGAAAGTGTTAACATAGATCTTAATGCCGATGAGGATTTGGGCAACACACCTAGCAACGAAGGAGTAAAGGGAACACCATGCAAATTGGCTATAGGATCAATTAATAATATCGTTGCAATAGCCACCGTATTTGACGATAACAGTGACTATCCCAATGTTAAAGTTTTGGTGGACTTGTTTACTAGAGGAGATTTTAGTATACCTATTCCAATGAAGGACAAGATAGAGACTTTAAATCAAGCGTTGGGTAACATTATTGAATGA

Coding sequence (CDS)

ATAGAGGATTCACATTCTAGCAGTGAGGATGAAAGGCAAATGATTCCTGAAGTAAGAACTAGATCATTCGTGCCACGTGGCCCAACTACTGTGTCAGAGTTAGCATCAGTAAGAAATTTTGGACAACGGTTGTCCGTTCAATTTAATGAACACGAGCAACCTATAGGAGCCACTTCTAAGAAAATGCAAAGTTACATTGGTGTGTGCTTTCAGCAGCAGTTTCCTGTCACATACAAATCTTGGAAACAAGTTCCGAATGAGTTGAAAGATAAAATCTATGATTGTTATTGGATGCATTAGTCACAACACATAAAGATGAGAACATATTGACTGAAGCATTGGGTTCCAAGACGCACGGTGGACGTGTCAGAGGCGTGGGTGGTTTTGTCTCTCAATCACAATATTTCAAAATAGTGAAAGGGAAAGAGGAAATGATAAGTTCTGAAGTTGAAATATGTCATAAAGAAGATGACTCAAGAAGCAAAAGTTACAAAAAGAGTCATAATCACTCGAGATCGTCCATCGAAAGTGTTAACATAGATCTTAATGCCGATGAGGATTTGGGCAACACACCTAGCAACGAAGGAGTAAAGGGAACACCATGCAAATTGGCTATAGGATCAATTAATAATATCGTTGCAATAGCCACCGTATTTGACGATAACAGTGACTATCCCAATGTTAAAGTTTTGGTGGACTTGTTTACTAGAGGAGATTTTAGTATACCTATTCCAATGAAGGACAAGATAGAGACTTTAAATCAAGCGTTGGGTAACATTATTGAATGA

Protein sequence

IEDSHSSSEDERQMIPEVRTRSFVPRGPTTVSELASVRNFGQRLSVQFNEHEQPIGATSKKMQSYIGVCFQQQFPVTYKSWKQVPNELKDKIYDCYWMH*SQHIKMRTY*LKHWVPRRTVDVSEAWVVLSLNHNISK**KGKRK**VLKLKYVIKKMTQEAKVTKRVIITRDRPSKVLT*ILMPMRIWATHLATKE*REHHANWL*DQLIISLQ*PPYLTITVTIPMLKFWWTCLLEEILVYLFQ*RTR*RL*IKRWVTLLNX

Homology

[Close]

BLAST of Chy6G119190 vs. ExPASy TrEMBL
Match: A0A0A0LAN8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G270810 PE=4 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 1.6e-37
Identity = 81/95 (85.26%), Postives = 85/95 (89.47%), Query Frame = 0


Query: 1  IEDSHSSSEDERQMIPEVRTRSFVPRGPTTVSELASVRNFGQRLSVQFNEHEQPIGATSK 60
          +EDSHSSSEDERQMIPEVRTR +VPRGPT VSELA  RN GQ+LSVQFNEH +PIGATSK
Sbjct: 1  MEDSHSSSEDERQMIPEVRTRLYVPRGPTIVSELAPTRNVGQQLSVQFNEHGKPIGATSK 60

Query: 61 KMQSYIGVCFQQQFPVTYKSWKQVPNELKDKIYDC 96
          KMQSYIGV  QQQ  VTYKSWKQVPNELKDKIYDC
Sbjct: 61 KMQSYIGVYIQQQISVTYKSWKQVPNELKDKIYDC 95

[Close]

BLAST of Chy6G119190 vs. ExPASy TrEMBL
Match: A0A5A7SMS6 (DUF4216 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G002020 PE=4 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 2.0e-35
Identity = 73/92 (79.35%), Postives = 83/92 (90.22%), Query Frame = 0


Query: 7   SSEDERQMIPEVRTRSFVPRGPTTVSELASVRNFGQRLSVQFNEHEQPIGATSKKMQSYI 66
           SSEDER+M+PEVR +SFVPRGPTT+SELA VRNFGQ+L +QFNEHEQP+GATSKKMQSYI
Sbjct: 344 SSEDEREMLPEVRKKSFVPRGPTTMSELALVRNFGQKLPIQFNEHEQPVGATSKKMQSYI 403

Query: 67  GVCFQQQFPVTYKSWKQVPNELKDKIYDCYWM 99
           GVC +QQ  +TY SWK+VPNELKDKIYDC  M
Sbjct: 404 GVCVRQQIHITYNSWKEVPNELKDKIYDCISM 435

[Close]

BLAST of Chy6G119190 vs. ExPASy TrEMBL
Match: A0A5A7UV39 (Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1186G00100 PE=3 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 2.6e-35
Identity = 73/92 (79.35%), Postives = 83/92 (90.22%), Query Frame = 0


Query: 7   SSEDERQMIPEVRTRSFVPRGPTTVSELASVRNFGQRLSVQFNEHEQPIGATSKKMQSYI 66
           SSEDER+M+PEVR +SFVPRGPTT+SELA VRN GQ+L +QFNEHEQP+GATSKKMQSYI
Sbjct: 602 SSEDEREMLPEVRKKSFVPRGPTTMSELALVRNSGQKLPIQFNEHEQPVGATSKKMQSYI 661

Query: 67  GVCFQQQFPVTYKSWKQVPNELKDKIYDCYWM 99
           GVC +QQ P+TY SWK+VPNELKDKIYDC  M
Sbjct: 662 GVCVRQQTPITYNSWKEVPNELKDKIYDCISM 693

[Close]

BLAST of Chy6G119190 vs. ExPASy TrEMBL
Match: A0A1S4E5B4 (uncharacterized protein LOC107992176 OS=Cucumis melo OX=3656 GN=LOC107992176 PE=4 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 2.6e-35
Identity = 73/92 (79.35%), Postives = 83/92 (90.22%), Query Frame = 0


Query: 7  SSEDERQMIPEVRTRSFVPRGPTTVSELASVRNFGQRLSVQFNEHEQPIGATSKKMQSYI 66
          SSEDER+M+PEVR +SFVPRGPTT+SELASVRN GQ+L +QFNEH QP+GATSKKMQSYI
Sbjct: 4  SSEDEREMLPEVRKKSFVPRGPTTMSELASVRNSGQKLLIQFNEHGQPVGATSKKMQSYI 63

Query: 67 GVCFQQQFPVTYKSWKQVPNELKDKIYDCYWM 99
          GVC +QQ P+TY SWK+VPNELKDKIYDC  M
Sbjct: 64 GVCVRQQIPITYNSWKEVPNELKDKIYDCISM 95

[Close]

BLAST of Chy6G119190 vs. ExPASy TrEMBL
Match: A0A5A7TYY0 (ULP_PROTEASE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold114G001050 PE=3 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 5.7e-35
Identity = 72/92 (78.26%), Postives = 82/92 (89.13%), Query Frame = 0


Query: 7  SSEDERQMIPEVRTRSFVPRGPTTVSELASVRNFGQRLSVQFNEHEQPIGATSKKMQSYI 66
          SSEDER+M+PEVR +SFVPRGPTT+SELA VRN GQ+L +QFNEH QP+GATSKKMQSYI
Sbjct: 4  SSEDEREMLPEVRKKSFVPRGPTTMSELALVRNSGQKLPIQFNEHRQPVGATSKKMQSYI 63

Query: 67 GVCFQQQFPVTYKSWKQVPNELKDKIYDCYWM 99
          GVC +QQ P+TY SWK+VPNELKDKIYDC  M
Sbjct: 64 GVCVRQQIPITYNSWKEVPNELKDKIYDCISM 95

[Close]

BLAST of Chy6G119190 vs. NCBI nr
Match: KGN57737.1 (hypothetical protein Csa_010021 [Cucumis sativus])

HSP 1 Score: 164 bits (414), Expect = 1.56e-45
Identity = 81/95 (85.26%), Postives = 85/95 (89.47%), Query Frame = 0


Query: 1  IEDSHSSSEDERQMIPEVRTRSFVPRGPTTVSELASVRNFGQRLSVQFNEHEQPIGATSK 60
          +EDSHSSSEDERQMIPEVRTR +VPRGPT VSELA  RN GQ+LSVQFNEH +PIGATSK
Sbjct: 1  MEDSHSSSEDERQMIPEVRTRLYVPRGPTIVSELAPTRNVGQQLSVQFNEHGKPIGATSK 60

Query: 61 KMQSYIGVCFQQQFPVTYKSWKQVPNELKDKIYDC 95
          KMQSYIGV  QQQ  VTYKSWKQVPNELKDKIYDC
Sbjct: 61 KMQSYIGVYIQQQISVTYKSWKQVPNELKDKIYDC 95

[Close]

BLAST of Chy6G119190 vs. NCBI nr
Match: XP_016903414.1 (PREDICTED: uncharacterized protein LOC107992176 [Cucumis melo])

HSP 1 Score: 156 bits (395), Expect = 2.69e-44
Identity = 72/89 (80.90%), Postives = 82/89 (92.13%), Query Frame = 0


Query: 7  SSEDERQMIPEVRTRSFVPRGPTTVSELASVRNFGQRLSVQFNEHEQPIGATSKKMQSYI 66
          SSEDER+M+PEVR +SFVPRGPTT+SELASVRN GQ+L +QFNEH QP+GATSKKMQSYI
Sbjct: 4  SSEDEREMLPEVRKKSFVPRGPTTMSELASVRNSGQKLLIQFNEHGQPVGATSKKMQSYI 63

Query: 67 GVCFQQQFPVTYKSWKQVPNELKDKIYDC 95
          GVC +QQ P+TY SWK+VPNELKDKIYDC
Sbjct: 64 GVCVRQQIPITYNSWKEVPNELKDKIYDC 92

[Close]

BLAST of Chy6G119190 vs. NCBI nr
Match: KAA0053221.1 (uncharacterized protein E6C27_scaffold102G00050 [Cucumis melo var. makuwa])

HSP 1 Score: 152 bits (384), Expect = 6.14e-42
Identity = 70/89 (78.65%), Postives = 81/89 (91.01%), Query Frame = 0


Query: 7   SSEDERQMIPEVRTRSFVPRGPTTVSELASVRNFGQRLSVQFNEHEQPIGATSKKMQSYI 66
           SSEDER+M+P+VR +SFVPRGPTT+SELASVRN GQ+L +QFNEH QP+GATSKKMQSYI
Sbjct: 42  SSEDEREMLPKVRKKSFVPRGPTTMSELASVRNSGQKLPIQFNEHGQPVGATSKKMQSYI 101

Query: 67  GVCFQQQFPVTYKSWKQVPNELKDKIYDC 95
           GVC +QQ  +TY SWK+VPNELKDKIYDC
Sbjct: 102 GVCVRQQISITYNSWKEVPNELKDKIYDC 130

[Close]

BLAST of Chy6G119190 vs. NCBI nr
Match: TYK08115.1 (hypothetical protein E5676_scaffold265G002840 [Cucumis melo var. makuwa])

HSP 1 Score: 153 bits (387), Expect = 1.28e-39
Identity = 71/89 (79.78%), Postives = 81/89 (91.01%), Query Frame = 0


Query: 7   SSEDERQMIPEVRTRSFVPRGPTTVSELASVRNFGQRLSVQFNEHEQPIGATSKKMQSYI 66
           SSEDER+M+PEVR +SFVPRGPTT+SELA VRN  Q+LS+QFNEH QP+GATSKKMQSYI
Sbjct: 199 SSEDEREMLPEVRKKSFVPRGPTTMSELALVRNSEQKLSIQFNEHGQPVGATSKKMQSYI 258

Query: 67  GVCFQQQFPVTYKSWKQVPNELKDKIYDC 95
           GVC +QQ P+TY SWK+VPNELKDKIYDC
Sbjct: 259 GVCVRQQIPITYNSWKEVPNELKDKIYDC 287

[Close]

BLAST of Chy6G119190 vs. NCBI nr
Match: KAA0046575.1 (uncharacterized protein E6C27_scaffold114G001050 [Cucumis melo var. makuwa])

HSP 1 Score: 155 bits (392), Expect = 1.78e-39
Identity = 71/89 (79.78%), Postives = 81/89 (91.01%), Query Frame = 0


Query: 7  SSEDERQMIPEVRTRSFVPRGPTTVSELASVRNFGQRLSVQFNEHEQPIGATSKKMQSYI 66
          SSEDER+M+PEVR +SFVPRGPTT+SELA VRN GQ+L +QFNEH QP+GATSKKMQSYI
Sbjct: 4  SSEDEREMLPEVRKKSFVPRGPTTMSELALVRNSGQKLPIQFNEHRQPVGATSKKMQSYI 63

Query: 67 GVCFQQQFPVTYKSWKQVPNELKDKIYDC 95
          GVC +QQ P+TY SWK+VPNELKDKIYDC
Sbjct: 64 GVCVRQQIPITYNSWKEVPNELKDKIYDC 92

The following BLAST results are available for this feature:

BLAST of Chy6G119190 vs.


Match Name	E-value	Identity	Description

BLAST of Chy6G119190 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LAN8	1.6e-37	85.26	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G270810 PE=4 SV=1	[more]
A0A5A7SMS6	2.0e-35	79.35	DUF4216 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A5A7UV39	2.6e-35	79.35	Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1186G00100 P...	[more]
A0A1S4E5B4	2.6e-35	79.35	uncharacterized protein LOC107992176 OS=Cucumis melo OX=3656 GN=LOC107992176 PE=...	[more]
A0A5A7TYY0	5.7e-35	78.26	ULP_PROTEASE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]

BLAST of Chy6G119190 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN57737.1	1.56e-45	85.26	hypothetical protein Csa_010021 [Cucumis sativus]	[more]
XP_016903414.1	2.69e-44	80.90	PREDICTED: uncharacterized protein LOC107992176 [Cucumis melo]	[more]
KAA0053221.1	6.14e-42	78.65	uncharacterized protein E6C27_scaffold102G00050 [Cucumis melo var. makuwa]	[more]
TYK08115.1	1.28e-39	79.78	hypothetical protein E5676_scaffold265G002840 [Cucumis melo var. makuwa]	[more]
KAA0046575.1	1.78e-39	79.78	uncharacterized protein E6C27_scaffold114G001050 [Cucumis melo var. makuwa]	[more]

BLAST of Chy6G119190 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 245..249

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy6G119190.1	Chy6G119190.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
molecular_function	GO:0008234	cysteine-type peptidase activity