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Chy6G119050 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTTCGACTCTTGGAATTTTTCAAATTTTCATCGAAAAGAATTCGTCTATCCTCCATTCGGAGAGAGAAAGAGGGAAACCCTTTATCTCCAGATTTTCGAGGAGAACTTGCAAAAGTCTCGAATGAACCTCCTGAACCTTACCCGTCTGCCTATATGCAAAAGGAAAGAAAAGCAGGGAAAGTGGAAAACCAGGTACAGTTGCCATAGAGTATACATGATAGAATACTTGCTGTCTATCTCGACCTAGAGCCTACTTTCCTACTGGATTGGGAATGAGCCTAGAAAACGACTCCTACACTGGTTGGAAGCAAAGGGGGACTGGAGGGATAGTAACTCCTACTGCCTACTCTAATTAGATGGCCTTACCCTAGCATTTGACTTAGTGCTTTAACAGCTTTTTTTTTGGAAGGCAATCGCATATTTCATTGCGCCTAATACTTCGGATATTGATAGATGAAAAATAGCATTTTACCGAGGGGCAGTTTCAGTCTACCTTTCATCTGCTGATGCTGATTCCCACCGAAAAGAAAGCGGACGAGAGCTCTCCACCACTAGTGGACTGCGGTCCAGGAGATGGCAAAGAATATTGCGTCTGTGGAAAAAGAGGATGAAATTATAGACAGTTAAGTGAGTCCGTATAAGTCGTTGTGCCCTCTGAGGCTGATCTTGCAGACAAGTGGAAAGAATCTTATATCAAGTCCACGTAGCGTTAATTCACTCATCAATCTCATTCCCAAAGAAACTCATGAAATCGGGACTTATTAGAATAGAATAAGGGCTAGAACCCGGCTCAGAATATCCCATCAATCGAATCGCTTTTTTGAGAAATACGAGACATCTAAGTCATACAAGTAAAGAGATATATTCATTGATAAGAAAAAATGTGAACGGTGATTGGATTGATGATAAAATCCAATCCTGGGTCTGGAACAGTGATTCGATTGATGATAAAGAAAGAGAATTCTTGGTTCAGTTCTCCACCTTAACGACAGAAAAAAGGATTGATCAAATTCTATTGAGTCTGACTCATAGTGATCATTTATCAAAGAATGACTCTGGTTATCAAATGATTGAACAACCGTAGCGTAGTGGGCTTTTCTTATGGCCTATTAGTTCGAACTTGGCTCCGCTCCATAGGCTTTCATCTAAATAGTAGGTTTCAAGTCCAAGAACAGCCTAGGGATCAGAAGTTCAAGCAAAGCAAAGGCTCAATGCAATATGAGTTGCGCACAAAAGAAAAAAAAAGGTGAATTTCCCCGACCCAGAAATATCCATTCTAAAGTGAGAGGTCGAATCCTGGGTTTATATACCCCGTGGGTTGAGACAAACAAATATCTCATGGTTTTTCAGATGTGGCGAGCATCTGGAATAACTAATGAATTACAACTCTATTGCACCGCAATTGGTGCATTAGTCTTTGCAGCCTTAATGCTTTTTGCTGGTTGGTTTCATTATCACAAGGCTGCTCCAAAATTGGCTTGGTTTCAAGATGTAGAATCCATGTTGAATCACCATTTAGCGGGTCTGCTAGGACTTGGGTCTCTGATTTTGCTAGTCAAAGAAAGGTCCAAGTGA ATGCTTCGACTCTTGGAATTTTTCAAATTTTCATCGAAAAGAATTCGTCTATCCTCCATTCGGAGAGAGAAAGAGGGAAACCCTTTATCTCCAGATTTTCGAGGAGAACTTGCAAAAGTCTCGAATGAACCTCCTGAACCTTACCCGTCTGCCTATATGCAAAAGGAAAGAAAAGCAGGGAAAGTGGAAAACCAGTTTCAGTCTACCTTTCATCTGCTGATGCTGATTCCCACCGAAAAGAAAGCGGACGAGAGCTCTCCACCACTAGTGGACTGCGGTCCAGGAGATGGCAAAGAATATTGCATGTGGCGAGCATCTGGAATAACTAATGAATTACAACTCTATTGCACCGCAATTGGTGCATTAGTCTTTGCAGCCTTAATGCTTTTTGCTGGTTGGTTTCATTATCACAAGGCTGCTCCAAAATTGGCTTGGTTTCAAGATGTAGAATCCATGTTGAATCACCATTTAGCGGGTCTGCTAGGACTTGGGTCTCTGATTTTGCTAGTCAAAGAAAGGTCCAAGTGA ATGCTTCGACTCTTGGAATTTTTCAAATTTTCATCGAAAAGAATTCGTCTATCCTCCATTCGGAGAGAGAAAGAGGGAAACCCTTTATCTCCAGATTTTCGAGGAGAACTTGCAAAAGTCTCGAATGAACCTCCTGAACCTTACCCGTCTGCCTATATGCAAAAGGAAAGAAAAGCAGGGAAAGTGGAAAACCAGTTTCAGTCTACCTTTCATCTGCTGATGCTGATTCCCACCGAAAAGAAAGCGGACGAGAGCTCTCCACCACTAGTGGACTGCGGTCCAGGAGATGGCAAAGAATATTGCATGTGGCGAGCATCTGGAATAACTAATGAATTACAACTCTATTGCACCGCAATTGGTGCATTAGTCTTTGCAGCCTTAATGCTTTTTGCTGGTTGGTTTCATTATCACAAGGCTGCTCCAAAATTGGCTTGGTTTCAAGATGTAGAATCCATGTTGAATCACCATTTAGCGGGTCTGCTAGGACTTGGGTCTCTGATTTTGCTAGTCAAAGAAAGGTCCAAGTGA MLRLLEFFKFSSKRIRLSSIRREKEGNPLSPDFRGELAKVSNEPPEPYPSAYMQKERKAGKVENQFQSTFHLLMLIPTEKKADESSPPLVDCGPGDGKEYCMWRASGITNELQLYCTAIGALVFAALMLFAGWFHYHKAAPKLAWFQDVESMLNHHLAGLLGLGSLILLVKERSK* Homology
BLAST of Chy6G119050 vs. ExPASy Swiss-Prot
Match: Q2QD89 (Photosystem I P700 chlorophyll a apoprotein A1 OS=Cucumis sativus OX=3659 GN=psaA PE=3 SV=1) HSP 1 Score: 139.0 bits (349), Expect = 5.0e-32 Identity = 65/65 (100.00%), Postives = 65/65 (100.00%), Query Frame = 0
BLAST of Chy6G119050 vs. ExPASy Swiss-Prot
Match: Q0ZJ20 (Photosystem I P700 chlorophyll a apoprotein A1 OS=Vitis vinifera OX=29760 GN=psaA PE=3 SV=1) HSP 1 Score: 139.0 bits (349), Expect = 5.0e-32 Identity = 65/65 (100.00%), Postives = 65/65 (100.00%), Query Frame = 0
BLAST of Chy6G119050 vs. ExPASy Swiss-Prot
Match: Q7YJX2 (Photosystem I P700 chlorophyll a apoprotein A1 OS=Calycanthus floridus var. glaucus OX=212734 GN=psaA PE=3 SV=1) HSP 1 Score: 137.9 bits (346), Expect = 1.1e-31 Identity = 64/65 (98.46%), Postives = 65/65 (100.00%), Query Frame = 0
BLAST of Chy6G119050 vs. ExPASy Swiss-Prot
Match: Q09X17 (Photosystem I P700 chlorophyll a apoprotein A1 OS=Morus indica OX=248361 GN=psaA PE=3 SV=1) HSP 1 Score: 137.5 bits (345), Expect = 1.5e-31 Identity = 64/65 (98.46%), Postives = 65/65 (100.00%), Query Frame = 0
BLAST of Chy6G119050 vs. ExPASy Swiss-Prot
Match: A0A335 (Photosystem I P700 chlorophyll a apoprotein A1 OS=Coffea arabica OX=13443 GN=psaA PE=3 SV=1) HSP 1 Score: 137.1 bits (344), Expect = 1.9e-31 Identity = 63/65 (96.92%), Postives = 65/65 (100.00%), Query Frame = 0
BLAST of Chy6G119050 vs. ExPASy TrEMBL
Match: A0A218KG56 (Photosystem I P700 chlorophyll a apoprotein A1 OS=Cucumis sativus var. hardwickii OX=319220 GN=psaA PE=3 SV=1) HSP 1 Score: 139.0 bits (349), Expect = 1.8e-29 Identity = 65/65 (100.00%), Postives = 65/65 (100.00%), Query Frame = 0
BLAST of Chy6G119050 vs. ExPASy TrEMBL
Match: A0A292G374 (Photosystem I P700 chlorophyll a apoprotein A1 OS=Vitis x champinii OX=884146 GN=psaA PE=3 SV=1) HSP 1 Score: 139.0 bits (349), Expect = 1.8e-29 Identity = 65/65 (100.00%), Postives = 65/65 (100.00%), Query Frame = 0
BLAST of Chy6G119050 vs. ExPASy TrEMBL
Match: A0A5J6WDA0 (Photosystem I P700 chlorophyll a apoprotein A1 OS=Vitis hancockii OX=1046262 GN=psaA PE=3 SV=1) HSP 1 Score: 139.0 bits (349), Expect = 1.8e-29 Identity = 65/65 (100.00%), Postives = 65/65 (100.00%), Query Frame = 0
BLAST of Chy6G119050 vs. ExPASy TrEMBL
Match: A0A1X9Q1T9 (Photosystem I P700 chlorophyll a apoprotein A1 OS=Cucumis sativus OX=3659 GN=psaA PE=3 SV=1) HSP 1 Score: 139.0 bits (349), Expect = 1.8e-29 Identity = 65/65 (100.00%), Postives = 65/65 (100.00%), Query Frame = 0
BLAST of Chy6G119050 vs. ExPASy TrEMBL
Match: A0A1C9U812 (Photosystem I P700 chlorophyll a apoprotein A1 OS=Vitis amurensis OX=103351 GN=psaA PE=3 SV=1) HSP 1 Score: 139.0 bits (349), Expect = 1.8e-29 Identity = 65/65 (100.00%), Postives = 65/65 (100.00%), Query Frame = 0
BLAST of Chy6G119050 vs. NCBI nr
Match: WP_203544736.1 (hypothetical protein, partial [Desulfovibrio sp. JC022] >NDV25020.1 photosystem I core protein PsaA [Desulfovibrio sp. JC022]) HSP 1 Score: 137 bits (344), Expect = 1.06e-37 Identity = 63/65 (96.92%), Postives = 65/65 (100.00%), Query Frame = 0
BLAST of Chy6G119050 vs. NCBI nr
Match: AOW69021.1 (orf113b [Brassica oleracea var. capitata]) HSP 1 Score: 136 bits (342), Expect = 3.85e-37 Identity = 63/65 (96.92%), Postives = 65/65 (100.00%), Query Frame = 0
BLAST of Chy6G119050 vs. NCBI nr
Match: RYR38811.1 (hypothetical protein Ahy_A09g044022 [Arachis hypogaea]) HSP 1 Score: 135 bits (341), Expect = 4.06e-37 Identity = 63/65 (96.92%), Postives = 65/65 (100.00%), Query Frame = 0
BLAST of Chy6G119050 vs. NCBI nr
Match: PNT44002.1 (hypothetical protein POPTR_003G065200, partial [Populus trichocarpa]) HSP 1 Score: 137 bits (346), Expect = 5.12e-37 Identity = 64/65 (98.46%), Postives = 65/65 (100.00%), Query Frame = 0
BLAST of Chy6G119050 vs. NCBI nr
Match: AGY62833.1 (orf167 [Eruca vesicaria subsp. sativa]) HSP 1 Score: 135 bits (341), Expect = 5.46e-37 Identity = 63/65 (96.92%), Postives = 65/65 (100.00%), Query Frame = 0
BLAST of Chy6G119050 vs. TAIR 10
Match: ATCG00350.1 (Photosystem I, PsaA/PsaB protein ) HSP 1 Score: 135.6 bits (340), Expect = 3.9e-32 Identity = 63/65 (96.92%), Postives = 65/65 (100.00%), Query Frame = 0
BLAST of Chy6G119050 vs. TAIR 10
Match: ATCG00340.1 (Photosystem I, PsaA/PsaB protein ) HSP 1 Score: 60.8 bits (146), Expect = 1.2e-09 Identity = 29/68 (42.65%), Postives = 39/68 (57.35%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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