Chy6G118360 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTCAGTTATGTAATATCTCAGAGCAAGTGAATATCAAGTCTTCTGCTCACATGTTCTATCAGTTTTTCAAGAACAAAATGGATTATGTTTTTGTTCAAATGTTCCCTGAAATTTATAAGAGTTGTAAGGTTGTGGAAGGGAATGGTTTTTCTCATGGCAGCATCATCCACTTAAAATTTAACGCAGGTGAGGATCTGTATCAACCATCATTTCAAAATTTTTCAATTTTGGTTCGTTATACTTTTAAATGTTCTATATTTTAACATTTCGACTTTTTTTTTCGACCAAAATTACCTTTAACTAATTAATATTATTTATTTATTATTTCAAAAAACTATTTAAAAAACACTATTATCAAGATAGGCCATGTTTAATTTTTAGTTTTAAAAATTAAGCTCATAAACACTATTCTTACCCTCCAAATCTTTTTCTTTAAGTTGTGTACTTTTCTACGCATGTTTTAAAAATCAACGGAGCTAGTTTCTAGAAACAAAAATAAAATGAATTTTAAAAGTTTGCTTTTGTTTCACGAATTTGGTTAATAATTCGAACTTTTTTAATAAAAAAATTACGATCAAATTCGAAGAAATCAAGCCTAAATTAGAACAAAAGGCCAAATAAGTGTCATCAAATCAAGCCTAAAAGGTTCTAGGTTTGTTACGCTACCTCCTTATGACATCATATTCTTCCTCACATTTATATCAATACAATTGATGCGTCAGGTTTTATATGTCAGTTGTACATATACACCTTTATTGTATTTTGCGAGCTTCTGGGATTTACTTAGCAACAATTCTTACTCTCTTTTTGTTTTTTTTTTTCCTTGTTTTGGATGAAATAACTTAGGAAAACCAGAAGAGGTGAAAGAGAGGCTAGCTATTGATGATGCCAACAAATCAATAACTTTTGAGTGCCTTGAAGGAGATCCATTAAGAGATTTTGAAGTGATTAAATTAAAATTTCAAGTTCTTGAGAATGGTAACAATGGAGGAACAGTTAATTGGTCTATAGAGTTTGTGAAGGCAAATGAGGAAGTGGCTTCACCACATCACTATCTCCTATGTGTAACTAAAGTTGCCAAAGGCCTTGATGACTACCTTTGCAACAACTGA ATGGCTCAGTTATGTAATATCTCAGAGCAAGTGAATATCAAGTCTTCTGCTCACATGTTCTATCAGTTTTTCAAGAACAAAATGGATTATGTTTTTGTTCAAATGTTCCCTGAAATTTATAAGAGTTGTAAGGTTGTGGAAGGGAATGGTTTTTCTCATGGCAGCATCATCCACTTAAAATTTAACGCAGGAAAACCAGAAGAGGTGAAAGAGAGGCTAGCTATTGATGATGCCAACAAATCAATAACTTTTGAGTGCCTTGAAGGAGATCCATTAAGAGATTTTGAAGTGATTAAATTAAAATTTCAAGTTCTTGAGAATGGTAACAATGGAGGAACAGTTAATTGGTCTATAGAGTTTGTGAAGGCAAATGAGGAAGTGGCTTCACCACATCACTATCTCCTATGTGTAACTAAAGTTGCCAAAGGCCTTGATGACTACCTTTGCAACAACTGA ATGGCTCAGTTATGTAATATCTCAGAGCAAGTGAATATCAAGTCTTCTGCTCACATGTTCTATCAGTTTTTCAAGAACAAAATGGATTATGTTTTTGTTCAAATGTTCCCTGAAATTTATAAGAGTTGTAAGGTTGTGGAAGGGAATGGTTTTTCTCATGGCAGCATCATCCACTTAAAATTTAACGCAGGAAAACCAGAAGAGGTGAAAGAGAGGCTAGCTATTGATGATGCCAACAAATCAATAACTTTTGAGTGCCTTGAAGGAGATCCATTAAGAGATTTTGAAGTGATTAAATTAAAATTTCAAGTTCTTGAGAATGGTAACAATGGAGGAACAGTTAATTGGTCTATAGAGTTTGTGAAGGCAAATGAGGAAGTGGCTTCACCACATCACTATCTCCTATGTGTAACTAAAGTTGCCAAAGGCCTTGATGACTACCTTTGCAACAACTGA MAQLCNISEQVNIKSSAHMFYQFFKNKMDYVFVQMFPEIYKSCKVVEGNGFSHGSIIHLKFNAGKPEEVKERLAIDDANKSITFECLEGDPLRDFEVIKLKFQVLENGNNGGTVNWSIEFVKANEEVASPHHYLLCVTKVAKGLDDYLCNN* Homology
BLAST of Chy6G118360 vs. ExPASy Swiss-Prot
Match: Q06394 (Major latex protein 146 OS=Papaver somniferum OX=3469 GN=MLP146 PE=2 SV=1) HSP 1 Score: 72.0 bits (175), Expect = 6.5e-12 Identity = 40/139 (28.78%), Postives = 68/139 (48.92%), Query Frame = 0
BLAST of Chy6G118360 vs. ExPASy Swiss-Prot
Match: P85524 (Kirola OS=Actinidia deliciosa OX=3627 PE=1 SV=1) HSP 1 Score: 69.7 bits (169), Expect = 3.2e-11 Identity = 41/141 (29.08%), Postives = 77/141 (54.61%), Query Frame = 0
BLAST of Chy6G118360 vs. ExPASy Swiss-Prot
Match: P19825 (Major latex protein 15 OS=Papaver somniferum OX=3469 GN=MLP15 PE=2 SV=2) HSP 1 Score: 69.3 bits (168), Expect = 4.2e-11 Identity = 41/139 (29.50%), Postives = 65/139 (46.76%), Query Frame = 0
BLAST of Chy6G118360 vs. ExPASy Swiss-Prot
Match: Q06395 (Major latex protein 149 OS=Papaver somniferum OX=3469 GN=MLP149 PE=2 SV=1) HSP 1 Score: 66.6 bits (161), Expect = 2.7e-10 Identity = 39/142 (27.46%), Postives = 66/142 (46.48%), Query Frame = 0
BLAST of Chy6G118360 vs. ExPASy Swiss-Prot
Match: Q93VR4 (MLP-like protein 423 OS=Arabidopsis thaliana OX=3702 GN=MLP423 PE=2 SV=1) HSP 1 Score: 65.5 bits (158), Expect = 6.1e-10 Identity = 43/142 (30.28%), Postives = 74/142 (52.11%), Query Frame = 0
BLAST of Chy6G118360 vs. ExPASy TrEMBL
Match: A0A0A0LCM8 (Bet_v_1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G333840 PE=3 SV=1) HSP 1 Score: 304.3 bits (778), Expect = 2.9e-79 Identity = 144/151 (95.36%), Postives = 148/151 (98.01%), Query Frame = 0
BLAST of Chy6G118360 vs. ExPASy TrEMBL
Match: A0A5D3BQS1 (Major latex protein 149-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold451G001000 PE=3 SV=1) HSP 1 Score: 295.4 bits (755), Expect = 1.3e-76 Identity = 137/151 (90.73%), Postives = 146/151 (96.69%), Query Frame = 0
BLAST of Chy6G118360 vs. ExPASy TrEMBL
Match: A0A1S3C4L4 (major latex protein 149-like OS=Cucumis melo OX=3656 GN=LOC103496825 PE=3 SV=1) HSP 1 Score: 295.4 bits (755), Expect = 1.3e-76 Identity = 137/151 (90.73%), Postives = 146/151 (96.69%), Query Frame = 0
BLAST of Chy6G118360 vs. ExPASy TrEMBL
Match: A0A6J1F4J9 (kirola-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111442103 PE=3 SV=1) HSP 1 Score: 228.4 bits (581), Expect = 2.0e-56 Identity = 104/151 (68.87%), Postives = 131/151 (86.75%), Query Frame = 0
BLAST of Chy6G118360 vs. ExPASy TrEMBL
Match: A0A6J1F532 (kirola-like OS=Cucurbita moschata OX=3662 GN=LOC111442243 PE=3 SV=1) HSP 1 Score: 222.6 bits (566), Expect = 1.1e-54 Identity = 100/151 (66.23%), Postives = 125/151 (82.78%), Query Frame = 0
BLAST of Chy6G118360 vs. NCBI nr
Match: XP_004149786.1 (kirola [Cucumis sativus] >KGN57826.1 hypothetical protein Csa_010178 [Cucumis sativus]) HSP 1 Score: 300 bits (767), Expect = 2.06e-102 Identity = 144/151 (95.36%), Postives = 148/151 (98.01%), Query Frame = 0
BLAST of Chy6G118360 vs. NCBI nr
Match: XP_008457055.1 (PREDICTED: major latex protein 149-like [Cucumis melo] >KAA0056082.1 major latex protein 149-like protein [Cucumis melo var. makuwa] >TYK01535.1 major latex protein 149-like protein [Cucumis melo var. makuwa]) HSP 1 Score: 291 bits (744), Expect = 6.63e-99 Identity = 137/151 (90.73%), Postives = 146/151 (96.69%), Query Frame = 0
BLAST of Chy6G118360 vs. NCBI nr
Match: XP_038893753.1 (kirola-like [Benincasa hispida]) HSP 1 Score: 261 bits (668), Expect = 2.57e-87 Identity = 120/151 (79.47%), Postives = 139/151 (92.05%), Query Frame = 0
BLAST of Chy6G118360 vs. NCBI nr
Match: KAG6581206.1 (Major latex protein 146, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 231 bits (590), Expect = 1.92e-75 Identity = 107/151 (70.86%), Postives = 133/151 (88.08%), Query Frame = 0
BLAST of Chy6G118360 vs. NCBI nr
Match: XP_023528288.1 (kirola-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 229 bits (583), Expect = 2.24e-74 Identity = 106/151 (70.20%), Postives = 130/151 (86.09%), Query Frame = 0
BLAST of Chy6G118360 vs. TAIR 10
Match: AT5G28010.1 (Polyketide cyclase/dehydrase and lipid transport superfamily protein ) HSP 1 Score: 70.5 bits (171), Expect = 1.3e-12 Identity = 41/148 (27.70%), Postives = 77/148 (52.03%), Query Frame = 0
BLAST of Chy6G118360 vs. TAIR 10
Match: AT1G23120.1 (Polyketide cyclase/dehydrase and lipid transport superfamily protein ) HSP 1 Score: 66.2 bits (160), Expect = 2.5e-11 Identity = 40/149 (26.85%), Postives = 73/149 (48.99%), Query Frame = 0
BLAST of Chy6G118360 vs. TAIR 10
Match: AT1G24020.1 (MLP-like protein 423 ) HSP 1 Score: 65.5 bits (158), Expect = 4.3e-11 Identity = 43/142 (30.28%), Postives = 74/142 (52.11%), Query Frame = 0
BLAST of Chy6G118360 vs. TAIR 10
Match: AT1G24020.2 (MLP-like protein 423 ) HSP 1 Score: 65.5 bits (158), Expect = 4.3e-11 Identity = 43/142 (30.28%), Postives = 74/142 (52.11%), Query Frame = 0
BLAST of Chy6G118360 vs. TAIR 10
Match: AT1G14930.1 (Polyketide cyclase/dehydrase and lipid transport superfamily protein ) HSP 1 Score: 63.2 bits (152), Expect = 2.1e-10 Identity = 37/140 (26.43%), Postives = 70/140 (50.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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