Chy6G118260 (gene) Cucumber (hystrix) v1

Overview


Name	Chy6G118260
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	double-stranded RNA-binding protein 4-like isoform X3
Location	chrH06: 12127185 .. 12139412 (-)
RNA-Seq Expression	Chy6G118260
Synteny	Chy6G118260

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGAATCCGGTACAGTTGAAGCAGGTGCACCGCAACAATCTCCATTCCCGTCCGACTCAGTTCCAACTGTTGTTACCCCTCCTATTCCGGTAGAAAACTCCCATACTCTTCAGCCTCAACCAGATATTCATCCTCCTTCTGTTTTACCGGACTTAGTTCCGATTCCAAGTGCGGCTCCAGCTCCGATTCCGTCTCCTAATCTCTCTGATCCTACTCGTAAGTGTATGGCAATGTTGCCCATCGTTCCGTTGAGGATGCATTTTTTGTTCTTGGTGTTTGGTTATAATTGTTTAGTGTTTTCATTTCAGCAAATATCTTCCATATTAGATGGATTTCCTCTACATTTCGTGTAGTTAAGTTCTCCATCTGTTTTTGTTTTCTGTTAGAGAGAGAAGCAATTGCGAGCCATTTGTGTGTGTTGAAAGAATTATTTTGTTCTCCGTATGTGTTTATGAGGTCCTGAGAATTCAATTATAAGTTGCTATTTTTTACTTCCATTTCCATCTTCTTTCCACAAATTTTGGATAGTCGGTTGTTTTGTAAGTTAGAATACTGGTAGTTGTGTGGCGATGATCTAGATATTCCTTCCTTGTTCGGTCTTTAAAACAAAAATAATTTGGAGAATTCTCTTGAAGAAAATTTCTACGGGGTTTACTTCTAGCCCATCTTCTTAACCACAATGAGTTGGCTTAGCGGTAAAAAAGGAGTATGAGTATATCTAGAGCTCATGGGTTCAATTCACGGGAACCACCTACCTAGAAATTCATTTACTACGAATTTCTTTGACAACCAAATGTTGTAAGGTTGGACAGATTGTTTAGTAGATTAGTCCGGGTGTGCATAAGCTGGCCCACACTCACATATATAAAAAAAAAACTCTAGCCTATCATCTTGCCCTCGATCCTTAGTGGTGTGTTCTTCGCAAGAATAGTGAGACTATTTATTCACCTTCACCTCATAAGACTGCTTTTCCTACATTCTGCTGTGTGCCTTTTGGAAGATGGAGAAACTAAAGATTAGTCGCTTCAGGCATTGGTGGATTTGACTCAGTCTTTGCAGACCAGTTTCTTGACAATTCTTTGGTGGATTTGATATTATTTCTTTTTTATCTCGTGAGTTTTCTTTCTCTATGATTAAAGATGTAGGATCCTTTTCTTATAGTTTCTTTTGCCAGGTTTGCATGTTGGTTAGGCGCTCAAGGCTATGTTTTTGTATGGTCTTTTTGTTCTTCCATTTCCCTCAATGACCATAACAGAAATGAAAGGAAAAAAGAATAAGTTGTTAACTGAAGAGGAGGGTTTTGCATTGGATACTTATAATCTGACGTTGCAAATTGAGAAACTTGTAATTTTCTACAGTTGTTTGTACACGTGGACTCTTCTAATGTTCCTCCTTTCACTTTTGGGCTTCAATTTGTTTATGAGTATGATTCAATGCATCCATCTTTATGCATCACACTCTCATCACACAAATAGAGAGAATTAAAATATTTCAAAAACGATGTTAGAAGAATTTGGTGGGGTGTACATAGATACCTGTTTTTCCAGACGCACATGAGTTTTTTATTCATATTTTATTCTAGTTGTGTAATACAAGACAAAGGTCCCCTCAGTTTTATTGTGCACAAATTTGTTATTTGGTGGATTTTTGTTCTTTATAAGAATGGAAGAGAAATCAATGTTATGGTTTTGCAGAAATCTTCGTGTACAAAAATCATTTGCACGAGTATGCTCAAAAGGCAAAGATTGCAGTACCAGTATACCAGACTATTGATGAAGGGTCCCCAGGTCTGCCTAAATACAGGTCAACTGTGATGGTTGCTGAGGTACATTATGTGTCTCCTAATACCTTCCGAAATCGAAAGGCGGCTGAGCAAGATGCTGCGAGAATTGCCTTTGAGTACATATCAAAAAAGACAATGGATGATGCCTTTCTTCTTCTACGTGAGGTACGAGTTATACAGTGATATTGAAACTTGATTTGTTGTCTTTAATTTTTAGTATGCGTATAACTGTGCTTGATTATTTATTTATTTCATTTTTTAAAATTCTAGTACAACATATGTGGTGGAAACTGTAGATTTAAATTTTCTGACCTTAATGGAAGGAATAGATGCCTTCACCACTATATTATGCTCACGTGGTCATAATTTTGCTTGCTTAGTTGATTATAAATGCAATTCTACGATTAGATTTCCTATATGGATTTGTGGTTTGTTACAAATAAGATTTTCTGCATGGAAAATACTATTGTTGTAATTTTCTTTCACAATGTGTATAATAACTTATTTGAAGAAAACAGAAGCATTGATAGTTGAATTGCATTTAATCACTTAAGTTGGGTAAGATTTCTCATGGTCGTAGTCATAGTCATAGACCTCAAAAGTTGGAATTTATGTAATTGATTTTAGTGATAAGGCATTCAGTTTGCCTGAATAAGAAGTTTGGAAATTATGCCCTCGGGAATTTGGTCGTTAGAAACTGAATGCTTTTGTTTGTACTTCATGGTGAATAGGGATAAGATTCAAATGTATAAGAATGAAAGATAGTTTAGATTTATTTATGTTATGAGAAAAATCTGAGCTTTCATTCAGAATTATGATAGAGCATACAAATAGATAGCCTCAATAGGAAGGCAAGAACTACAAGGTTTCAAATCCAAAAGAATAAGGCCCTAACCAAGGTTTCATGTAATGTCCTCCCACAACTCCTCGGCGTAGCACTCCCTCTAAAAGTTCTATTATTTCTTTCAAGCTACATATCACAAACAATTGAAAAAGGAAAATAAAAATGAAAAACGTATTAGATAAGCATGAGGTTTCATCTCAAAACCAACCAACAATAAGAGGAGTAACTCCCTCCATAGCGCCAAGGATCTTAAAAGAATATTTCCTAATCTCTCTCGATGTTGCTCCTTCCTACCCTTTCTCCTTGTCTTACTAGACCCTTTCTCTACCAACACAACCATGAGACCTCTCTGATCACCACATATGACGATGCATACTCACAGCCCCAAATAATCGAGAGAAAAGTTTATTATGGCAGTAGATTTTATGTATAGAGGCTCACATATTTTTTTAAGAAGAAACAAGTTTCGTTTATTAATAAATTAATAATATAGAGACAGAAGCTCATAGTACAAGAGGATTGCAATGAGCAAAAAGAGAGATAGATCAATCGACGCACCCCAACATCTTGAGTAGGCAGTTTTTTTGACGGAGGTTGACATGTGAAAATATCTAAAGCTACGAGAAAAATTCTTTTAGAAATTTACTGTTGGTTATTATTGTATTTATTTATTTACTTTCTTATGAAATGAACAACTTTTATTGAGAATAAATGAAAGAATACAAGGACATAAAAAAATAAAAAACCAAACTCACAAAAAGGAAACTCACCTAGAGAAATCGGCTTAAGTTATCTGAAATGTTACTTATAGAATAATTATAAAAGATCCTCAAAACTGGAGCAAATACAGAAACATGAAAAGTACCAAGAGAACAAACATCATTAGATGTCCCTCTCCAAACCTGAAAAAGCTTTGTTATTTTGTTTGCCCCAAAGATCCCATAATATAGTGCACACTGCAAAAAAACCATGAGAACCAACTTTTCTTCCAAAGGACGAATGGAGGAGGAACTTCTTAATTATATCACTGGTGTCTGTGTCGAGCAAGTGAGAGACCAAATGTTGGGAGAAAAACGAAGAGTCAATGAGATTGCTAAGCTAGCATGAAGAAGGAAAATGGCTGCTCATGGTTCGATAAGAAGTTGAGAGACCAGTTTCCCTGGGAGGGTTAGAAGTTAGTAACTTAAGAATTCACAATAAAGTTTTGTTAGTCAAATGGCTTTGGTGTTTTTCGTTGAGTCCAACTCTCTACCATACATATTAATTATAGATGGGCTTATGTGGAAGAAGTCTTTGCTAATGGGGTCATTTTGTTGTATTATTTGTCAAAAGGCGGTGGAAGACCCAAATCACATTCTTTAGAGTTGTCAATGTGGAACTGCGTCTTTTAGGAGTTTGATTTCGAGCTTGCTCGTCTGGGAGATGTTTGGGAGATGATCGGGGAGTTCCTTCTCCATTCACCTTTTAGAGAGAGACCAATTTCTTTGGTTAGTTGAGTTATATGCTATTTTGTGGGATATTTAGGGGGTAACAAAATGCTTAGGGTATGGAGAAGGACCTTGGTGTTGGAATTTATGTCCTAAAACTCATAGTTCGTAGTTGAAAATCATATTCTATTCAGTAGAGCTGTTATTGAGGAATTATTAGTGAAGCTGGTAGTACAAACGATGTGATTTTGAATCGTTTATGTACATGAAAGTGGAGACATCCTATGTAAAGAATTTACATAAAACTAAATCATGAAATGGTCACTTTTACGTAATAACATCGTTTACTATATAAAACTGATTATTTTGATTATTAATGACTTAGGTAACTTAATTTTAATCTTGAGCTAACTATGAATTACTGTTCACACGGGATTATCCGATTTGCATAGGTGAAGGCAGCACATCAGTGTTGGCCCAATAAGCCTCCCATTTCAGGGGTAAGTCCAGGTGGATAACTGGGGATATAGGATGCAAGATGGAATTCCTTTTTGATCGCTTTAGAGTTAGTAGATATGTTGTTCTCTTATGCACTGAATCCAGGTCTTGACAAGGGGCCTCAACCTCTAATTGGTCCGAGAGGGATTCAATTTATTGGTTGGACCTTAAACCAATTGTTTATTAAAGAATTAGTGGGACTTGAGGAATAAGATTTAATATTGGGGGTAAAACGGTATTTTGACCCAGTCGAGATTACAAACAACCTGTGAAGGACTAACTTACCAATCATAGTTTTATATTAAACGGACACAAATATATCTATAATAAGGGAGTGCAACTGTGAGACTTTAGTGGAATGATTTGTTAGTTAACGAATGTTGATTAGCTCGGTCTAAAAGAGTTTAGCCAGTTAATCTCAGATCGTGGAGCCCATAATCTATAGGTCCATCAGGTTCTTCTGCTATCTCATATGGAATTAAGTAATTAACTTAGAACAATATGATAGAATGATTCGAATTGTTCGAACTAGGGAAGGAGAAAGAAATCGACAAGTATATGTAATATAGCTGTCGGTTATTAGTTTAGAGATGGAGTTTTATGTTTAAATATGATTTAAATATAAAAAATATGAATGCAGATTCATATTTGGAAGCTCCAAAATTATGGAAATGGTCAAAATTGTAAAAAGTCAAAGGGTTGACTTTGAAAAGTCAAACTTTGACCGCCATTCGTTCAAATGTGATTTGAATTTTGAGAAAATGAATGTGGATTCATGCTCGAGAGGTCGAAATCAGTCAAAACAAACAAAATGGTAAAAAGTCAAAATGTTGACTTTTTGGTCAAAGTTTGACTTTGACTAATTTTAGGATAAGACCATTTTGCTCTTAGTGGGAAAATCCAACAAATTTGTTGGATAATTTGATTAAGGTTAGTTGGCTAGGTGTTGCCTTATTGTGAAGACAAAAAGCTCACTAAGTGTTAGTGGGTTATGTGTTGTTGGGTTTTGATGAAGAACAAATATGCATATTGCATGGTTTTTTCTTATAGTTTGTGTTTTCAAAATGATTTTCAAAATGATTTTGGGGTTGGCCGTTTTGGTTACTCTCTCAAGTGGGTTGGATTTATCCACTCACTTATGGTTTGTATAATTCAATTTTTCTTCACCAAGATATCTCTGAACCCTAAGCCCAATTCCTCAATTTCCATCTCTTTCTCTATCTCGGTTCCTTCATCCATCGGGTCCGAGAATCCAATTTTGAGTCCGAAGAATAGTAGGTCAACTCTAATGGTGGACTGGTTCGTGTTTGGATGGAAAATTGAGCGATTGCAAAGCTACAAAGGTGAGATTTAACTTAACCCTAATTTCTGTTTAATTTAGGCAATTTACATGTTAATTTAGTGCATTAGAGTAAAATTGATCCAGTTTATGCTGCGCATGTCTTACGTATCCATCACCTGGTGATATTTGGTTCTTGGTAGGGATGCAATCAGTTCGACTCGGCTTGGTTTGAGTCTCGAACCGAAACCGAACTGCCATATATTACTATGGAAATGGGAAAATTGCACTGAACTGCCTATGAATACTAATCGAACCGATGAGAACCAGTTTCTTCGGTTTGCTTTTTGGTTCTCATTAGTAATGACTGGTTTTGTCCCTCCAAGCGAGGGCCCACGAGCCCATTTCGTATTATTGGATCAGGCCCAAAGCAAGTCAAGGAAATTTGTGGAACTTGCATGTAAGCATATTAAAAAATAAAAGATTTGTGTTCACCTAGACTCGAGCACGCGCACAAGAGCATTTAATTGAATGGCACTGCTGCTAGAGATGCGTCTCTTCATTGGTTAAAATATTGATTTTTTAATATAATTATAGTTTTGGTCAGCTCGGTTATGGTTTATTTGGTCAACCAAAATTTTGATCAGTTCTTGAACTTTAAAACTTGAACCTTTGAACCAAACTGTTAATAAATCGAGTTGACATCAGTTTTGGTCGGTTTTTATTGGTTTTCAATTTGTTCTTGCACTCTAGTTCTTGGTGAGGTTCCATGTTTCTCTTTGGGCTTGTTCTCACAGACTTTTTTGTAAGTATCTGTAAGACCCCCTATTGTGCACACTTACAAAAGAAGGGGCAAAATGGTAAAAGCTCAAAAAGCAAATGATCAGGGAATAATGGAAAAAGACTGTGAGAGTGGGACTCACGGGGAGGATTGTGAGGTGAGATATAAATAGACCTCTATAGGGATGGGATAGCTAGGTTTTTTATAAGGAATACCTTTTGAGGGGGAAACGGCTGTAAGCCTGGGGAATTGCATAGCTTGCTATGGTATGTTTTTCATATTGTCGTGTCTGCTATTTTCTTATTACTACTGTGACTGTAATCTTTTTTGGCTTATACATAAATAAAGTATATCAGAGTGTTGCCTCTGTTTTTGTCATTGTTGGGTATTTTTTAGTGTTATACTTGTAGAATCGCTACGGTATCCTCTAAGTAGCATTTTACATGGAAACTCTTTCTTTAGAGGGGCTTTGTGGACTTGCTTTTATTGTTGCTCTTGTGTTCTTTAATTTTTTTTCTCAATGAAAGCAATTTTTAGATCAAAATATATATATTTTATTAAGTACAGCTCACTTGTAATGTCTTATTGTTGCCTCTTGCGTAAAGGCGATTATGAAACTTGTCACCTTAAGGTGTGCCCTTTGTTCATTGATTCTTGTTATTAATTGTCATTAATCTGGCAGGACTGATTACTTTGTTATCAAGTTGTTAAGGTTAGTTATATGCTTCAAATTTATCTGCCATCGCTCTAAATTTGACCCAAGAGTTCATCCAGCATATTTGTTGGGTATCCTCCTGGAATAAAGGTATATAAGCTCTATGATATGACTAAGAATTCTTTCTTTGTATCCAAAAATGTCCTATTCTTTGAAGACTTATTTCCCTTCCACAACCTTGGAGACACTACACGGGTCAGTCATGATTTCCTGGATGAGTTTGTGCTTCCATGTCCGCTGTTTGTTATTCCTGAAGCTATCTCGAGCACCACACCTCAACATAATAATGAGTCTCAGAATAATGCAACTACTTCTACTGATGGTGTTGATACAAACTGTTATGAGGAGCAATGAAATACTGAATGATGCTGCAATAGAACATACTGATAATGTTGTTATAACTGAAGTTGCAAATGAAGCCAACCGTAGTAGAAGCTGTGAGCCTACTGCAAATGATAGTAGCCGTGAACCTGCACCTGTCACACTCCGTAGATCATCTCGGCAGTTATGTCTACCTTCATATCTTAGGGATTTCCATTGCAGCATGATTGGGAAGAAACATGTCACTTCAACAGCCCCCTATTTCTTTGGCAAATATCTTTCTTATGAATCTTATTCACCTAGACATAAACACTATTTGCTTAATGTGACTGTTTATGAACCTACGTTCTATCACCCTGCTGTAAAGTTTCAGAATTGGAGAGATGCTATGCTGAAGAAATAAATGCAATGGAACGTAACAAGACTTGGATAGTGATTTCATCGCCCAAAAGTCAACACACACTAGGAAGCAAATGGGTGAATAAAGTCAAATATCTTCCCGGTGGAACTGTTGATCGGTACAAGGTGCGCCTTGTTGCTAAAGGCTATTATCAACAAGAAGGCATTGACTTCTTTGACACATTTTCTTCCGTGGCCTTTGTCACAGTAAAGGTATTTCTATCTAGTCACAGTAAAGGTATTTCTATCCGCCAATTTATTCAAATGGATATTACCAATGCCTTTTTAAATGGAGACTTATTTGAAGAGGTTTATATGTCCTTACCCATGGGATACAACATAACTATAATACCAAATAAGGGGGAGAAGCTCGTTTGTCGATTGAATAAGTCAATATATGGCCTCAAACAAGCCTTTAAACAATGGTTTGTGAAGTTTTCTTCTGTACTGTCTACACATGGCTTCAGCCAGTCAAAGTCCGACTATTCCCTCTATATTCGTGGAAGTGGTGAAACCTTTGTTGCATTGTTAGTATATATAGATAACATATTACTAATTGGACCTTCCCCGGATGAGATCAATGCTATCAAAAAGATCCTCAAAAGCCATTTTAAAGTTAAGGACTTGGGACAAGCCAAATATTTCCTAGGATTGGAGTTATCTCGATCAAAACAATGCTTATTTCTATCACAATGAAAATATTCCCTTCAAATCCTTGAAGACACTGGATACCTTGCTGCGAAGCTTGCTTCATTACCTATGGATCCAAACATCAAGCTCTCAAAAGACAAAGAAACTCTCTTAGTTGATGAAGAAATTACTTGTTATAGAGGTTAATTGGCCGACTTCTATACTTACAGATTTCCAGACCAGGCTTATGCTTTGCCATTCATCGTCTGAGTCAATTCTTACAAAAGCCAACTAATACTCATCTTAATGCTGCTCATCACTTGTTGAAATATTTAAAACGCCAGGGCAAGGCATTTTGATTAAGCCAACTCACTAGTTTCATCTCAAGGCTTATGTTGACGCTGATTGGGGGGCATGCCTTGACACTTCACAATCCATTTTAGGCTATTGTATTTTCTTAGGGAACTCATTAGTCTCATGGAAATCGAAGAAAGCAAGTCATTGTTTCGAGATCATTTGCAGAGGCAGAATATATAGAGCCTTGGCATCTGTAATAAGTGAACTTATATGGCTTTCTCAACTTCTAATTGATCTACACGTTCAACATATGTTACCAATGTGTTTTGTGACAACCAAGCTGCCTTTGCTATTGCATCCAATCCTACCTTCCATGATCAGACAAAGCACATAAAAATCGATTGCCACTTTGTAAAAGACAAGATCGTTGATGGCTTCTTGAAAGTATTGCCAATTCGATTATCCTTACAACTGGCTGACATGTTTACCGAGGCATTATCGGCTGTTTTGTCAAAACTTTTTGTCAAGTTGGGTGTCCTTGATGTCCATTTCCAACTTGAGGAGGAGTATTAAAATGATGCCTTGTAAATAATTGATTCTTGTTATTAATTGCCGTTAATCTTGTAGGATTGGATTCTTTGCTATCAAGTTGTTAATGTTAGTTATCAAGATCAGTATTTCTCTCTCCAGCCTATATATATGGCTTTATCCTTGTATTTAAATGTAAGTGGAGATTAAAACATTTAATGAGAAGTAACTCCATTTTTTTTTTCTTGAAAAGGATACGAGTCTCACTATTATTAGTATAAATAAAGAGACAAAGCTCAATGTACATGAGGGTTATACAAAGAGCAATAAGGGGAGGGAGGTTAGCAGGCGCATCCGGGCATCTCAACTAGGTTTGACACCCCCTTAGCGCCCTCAACACATCCAAAAAGTGACAATACAAGATCAAACAAAAAGTCACAAATACAAAGCCAAACAAAATGATAAAAAGAATCTGTCCAAAGAAAAATCATAAATAAAAGGCAGCATGCTGAGAACAAAGAAGAATAAACCTTGATTGATTGAACAAAAAGTTGTTTGAAGCATGGGGCTGATCCGGAAGTCCTGATGATCAATGACTTCAAAGTGGGGAGGCTGTAAAGGCTGGCCAATATAACACAATATCCTGCGTTGAAGTTCTTCTTTTTCATTACTTTTTCTAAAAATTCTCAATCCACTTTGTCGAAGGCCATTTCAAGGTCTAATTTAATGATCCATCCTTTCTTTTTTCAGATTCTATAGTCCTCCACAGCTTCGTTTGCTATTAAAATAGGATCCAAGATTTGACACCCTTCCAGAAAGCCACATTATGATGGAGCAATAATACTTGGCATTACTTGCTTTAATCTTTCTGCAAGAACCTTTGCAAACAACTTATAAATTAATGTTGAAACTGATCCAACAGAGAACGTGAAACTGACCTTCCTTCTCTTGACCATGAATGAGAAGTAACTCCATTTATGAGAAATAACCCCAATATTCAACGTTTATTACCCTTGGACTTTGAAAATGTTGTTAAGTACTTGCACTTTACCAATAATGAGGTCAAATATTGACACGTTTTTGAAAAAAAACGTATTTATTTGGATGTTGAAGTACTTTTTAATTTTATTGATTTCATATCTCTATACAAACTAACTTCATATCTCATATACAAACTAACTTCATATCTCATATACAAACTGTGTCACCTGTTATTTCTTCAGGATTTGATGTTATGCAAGTCCATTTTGTCTGAATATACGGACAAAATGGGTTTGGAAAGACCTATATACACAACTAAACACCATCAAGGCTCGGTTCCATTCTTCCAATCCACCTTGCTTTTTGATGGTGTGGTTTATACTAGTGATCTTAGTAGGACTAAGAAAGAGGCAGAGCAATTGGCAGCACGTGCAGCTATTCTTTCACTTCATGGTATTTGATTGTTGTAAACTAGTACTAAATTATTTCAAAATATTTGGTGCCTTGAATAAGATTATTATTTTTTAAAAAAGAATAACAATGAGGATAACAATTAATATTATTTTGTAGAAGATGCAACGAATCCTAAATCACAAAAAACTCTTGCGGACATCATTGCATCTAAAGTCAGATTCCATGCAATGTTGCAAAAGGTTAAAGATTCACATTTTTCTCAAATTCAACCGAAATCCATGCCTGAAAATACAGTGGAACGTGTTGCAATGACAGTTAATGAAGGCAAAGAACTTAAAGATGCTGTTTTAGACGGTGGAGTGGTATGTAGTGCAATTTCAGAGGCTTGTCCAACTTCTCAATTTCGACCTGAATTTAGTTCAACAAAACCGGATGGATCATCCCCTGTAGTGAGACTGCCAATAGAATTTGTGCCTTCAACTTTAGAGGAGCCTGTCGGTTATCATGCAACAATTGGGTCTAAAAGGAAATCTAAGAACAAGAGAAAGGCACGTAAGAAACTGTGTACGGAGAACCGGTAATTTTTCTTTCATGAAACTTCATCCAACATGTATATTTTCATTTGTTGGGGGTTCTTTTGTTGTTGTAATTATAAATGTCGATAATTTACAGTTTAAAACTCCACTGAGCATTTATTTTATGGTTTTTAGGGTATTATATAGTTGTTTACAGTAAACACCAGTCTTGTTACAACTAGAGCTATTCAATTTGCATGTTCATGGAGATAAGAAAATCAATCGAAATTTCTGTGGTAAGACTACTAGGCTGCAATTTATTTCAATGAAAAAGTGAAGTGATTGATACCTTTCAAGGTAAGGTGTGGATTCAAATCATGATGGTAGTCATCTAAGATACTAAAATATCTTCAACTTTCTTAATACTCAATGTATCGATTAAGATTTGATAGTTGTGCCTATGATTAATATAGATTTATTTAACTTATTCTGGTGCCCACAGTTAAAAATGCACAAAAACTGGGGGGCCTTTGTTTTGTGTACAAAATGATGTATCATATGGATAGTAAATGAATTCAAGTGTGTGATTAGTTGGAGGGAAGTTACTCTTGTTTTATTGGGCTATATGATAGGAGAGATGGCATGTCCCCTCAAGAGTTCTGCTATTTCTATGTTCTACTTGAATTATATTAATTTAGGCTCCATATGTGTAAGTTATTTCGATCGTATAACTAAATCTTCTTTTGCTAAAAATGACCAGGGTGGCTACCGAAACAAGTCAAACTGCTGCTCCTTGCTCCGTAGCTCAATGA

mRNA sequence

ATGGAAGAATCCGGTACAGTTGAAGCAGGTGCACCGCAACAATCTCCATTCCCGTCCGACTCAGTTCCAACTGTTGTTACCCCTCCTATTCCGGTAGAAAACTCCCATACTCTTCAGCCTCAACCAGATATTCATCCTCCTTCTGTTTTACCGGACTTAGTTCCGATTCCAAGTGCGGCTCCAGCTCCGATTCCGTCTCCTAATCTCTCTGATCCTACTCAAATCTTCGTGTACAAAAATCATTTGCACGAGTATGCTCAAAAGGCAAAGATTGCAGTACCAGTATACCAGACTATTGATGAAGGGTCCCCAGGTCTGCCTAAATACAGGTCAACTGTGATGGTTGCTGAGGTACATTATGTGTCTCCTAATACCTTCCGAAATCGAAAGGCGGCTGAGCAAGATGCTGCGAGAATTGCCTTTGAGTACATATCAAAAAAGACAATGGATGATGCCTTTCTTCTTCTACGTGAGGATTTGATGTTATGCAAGTCCATTTTGTCTGAATATACGGACAAAATGGGTTTGGAAAGACCTATATACACAACTAAACACCATCAAGGCTCGGTTCCATTCTTCCAATCCACCTTGCTTTTTGATGGTGTGGTTTATACTAGTGATCTTAGTAGGACTAAGAAAGAGGCAGAGCAATTGGCAGCACGTGCAGCTATTCTTTCACTTCATGAAGATGCAACGAATCCTAAATCACAAAAAACTCTTGCGGACATCATTGCATCTAAAGTCAGATTCCATGCAATGTTGCAAAAGGTTAAAGATTCACATTTTTCTCAAATTCAACCGAAATCCATGCCTGAAAATACAGTGGAACGTGTTGCAATGACAGTTAATGAAGGCAAAGAACTTAAAGATGCTGTTTTAGACGGTGGAGTGGTATGTAGTGCAATTTCAGAGGCTTGTCCAACTTCTCAATTTCGACCTGAATTTAGTTCAACAAAACCGGATGGATCATCCCCTGTAGTGAGACTGCCAATAGAATTTGTGCCTTCAACTTTAGAGGAGCCTGTCGGTTATCATGCAACAATTGGGTCTAAAAGGAAATCTAAGAACAAGAGAAAGGCACGTAAGAAACTGTGTACGGAGAACCGGGTGGCTACCGAAACAAGTCAAACTGCTGCTCCTTGCTCCGTAGCTCAATGA

Coding sequence (CDS)

ATGGAAGAATCCGGTACAGTTGAAGCAGGTGCACCGCAACAATCTCCATTCCCGTCCGACTCAGTTCCAACTGTTGTTACCCCTCCTATTCCGGTAGAAAACTCCCATACTCTTCAGCCTCAACCAGATATTCATCCTCCTTCTGTTTTACCGGACTTAGTTCCGATTCCAAGTGCGGCTCCAGCTCCGATTCCGTCTCCTAATCTCTCTGATCCTACTCAAATCTTCGTGTACAAAAATCATTTGCACGAGTATGCTCAAAAGGCAAAGATTGCAGTACCAGTATACCAGACTATTGATGAAGGGTCCCCAGGTCTGCCTAAATACAGGTCAACTGTGATGGTTGCTGAGGTACATTATGTGTCTCCTAATACCTTCCGAAATCGAAAGGCGGCTGAGCAAGATGCTGCGAGAATTGCCTTTGAGTACATATCAAAAAAGACAATGGATGATGCCTTTCTTCTTCTACGTGAGGATTTGATGTTATGCAAGTCCATTTTGTCTGAATATACGGACAAAATGGGTTTGGAAAGACCTATATACACAACTAAACACCATCAAGGCTCGGTTCCATTCTTCCAATCCACCTTGCTTTTTGATGGTGTGGTTTATACTAGTGATCTTAGTAGGACTAAGAAAGAGGCAGAGCAATTGGCAGCACGTGCAGCTATTCTTTCACTTCATGAAGATGCAACGAATCCTAAATCACAAAAAACTCTTGCGGACATCATTGCATCTAAAGTCAGATTCCATGCAATGTTGCAAAAGGTTAAAGATTCACATTTTTCTCAAATTCAACCGAAATCCATGCCTGAAAATACAGTGGAACGTGTTGCAATGACAGTTAATGAAGGCAAAGAACTTAAAGATGCTGTTTTAGACGGTGGAGTGGTATGTAGTGCAATTTCAGAGGCTTGTCCAACTTCTCAATTTCGACCTGAATTTAGTTCAACAAAACCGGATGGATCATCCCCTGTAGTGAGACTGCCAATAGAATTTGTGCCTTCAACTTTAGAGGAGCCTGTCGGTTATCATGCAACAATTGGGTCTAAAAGGAAATCTAAGAACAAGAGAAAGGCACGTAAGAAACTGTGTACGGAGAACCGGGTGGCTACCGAAACAAGTCAAACTGCTGCTCCTTGCTCCGTAGCTCAATGA

Protein sequence

MEESGTVEAGAPQQSPFPSDSVPTVVTPPIPVENSHTLQPQPDIHPPSVLPDLVPIPSAAPAPIPSPNLSDPTQIFVYKNHLHEYAQKAKIAVPVYQTIDEGSPGLPKYRSTVMVAEVHYVSPNTFRNRKAAEQDAARIAFEYISKKTMDDAFLLLREDLMLCKSILSEYTDKMGLERPIYTTKHHQGSVPFFQSTLLFDGVVYTSDLSRTKKEAEQLAARAAILSLHEDATNPKSQKTLADIIASKVRFHAMLQKVKDSHFSQIQPKSMPENTVERVAMTVNEGKELKDAVLDGGVVCSAISEACPTSQFRPEFSSTKPDGSSPVVRLPIEFVPSTLEEPVGYHATIGSKRKSKNKRKARKKLCTENRVATETSQTAAPCSVAQ*

Homology

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BLAST of Chy6G118260 vs. ExPASy Swiss-Prot
Match: Q6YW64 (Double-stranded RNA-binding protein 4 OS=Oryza sativa subsp. japonica OX=39947 GN=DRB4 PE=2 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 9.3e-23
Identity = 78/195 (40.00%), Postives = 111/195 (56.92%), Query Frame = 0


Query: 58  SAAPAPIPSPNLSDPTQIFVYKNHLHEYAQKAKIAVPVYQTIDEGSPGLPKYRSTVMVAE 117
           S AP P P P+ +       YK+ L EY Q+A   +P+Y T  +G     K++STVMV  
Sbjct: 26  SPAPLPPPPPHCN-------YKSKLQEYLQQANKQLPIYCTKCKGEHHQLKFKSTVMVDG 85

Query: 118 VHYVSPNTFRNRKAAEQDAARIAFEYISKK----TMD-DAFLLLREDLMLCKSILSEYTD 177
             + S    R  K AEQDAA++A++ + ++    T D D F L+ +D++  KSIL EYT 
Sbjct: 86  EEFSSTFCHRRVKDAEQDAAKVAYDTLLERKETETDDTDVFELIDQDVVFSKSILHEYTT 145

Query: 178 KMGLERPIYTTKHHQGSVPFFQSTLLFDGVVYTSDLSRTKKEAEQLAARAAILSLHEDAT 237
           K   ++P Y+    +GSV  + S++ F G  YT   +R KK+AEQ AARAA+ SL   AT
Sbjct: 146 KTKTDQPEYSVTKTEGSVTPYVSSVSFAGHTYTGGAARNKKDAEQKAARAAVKSLL--AT 205

Query: 238 NPKSQKTLADIIASK 248
           N  S   +A I+ SK
Sbjct: 206 NYTS---MAKIVRSK 208

[Close]

BLAST of Chy6G118260 vs. ExPASy Swiss-Prot
Match: O04492 (Double-stranded RNA-binding protein 1 OS=Arabidopsis thaliana OX=3702 GN=DRB1 PE=1 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 3.0e-21
Identity = 62/167 (37.13%), Postives = 91/167 (54.49%), Query Frame = 0


Query: 70  SDPTQIFVYKNHLHEYAQKAKIAVPVYQTIDEGSPGLPKYRSTVMVAEVHYVSPNTFRNR 129
           S  +  +V+K+ L EYAQK K+  PVY+ + EG      ++STV++  V Y S   F NR
Sbjct: 8   SGVSNCYVFKSRLQEYAQKYKLPTPVYEIVKEGPSHKSLFQSTVILDGVRYNSLPGFFNR 67

Query: 130 KAAEQDAARIAFEYISKKT-MDDAFLLLREDLMLCKSILSEYTDKMGLERPIYTTKHHQ- 189
           KAAEQ AA +A   ++K + +         +  LCK++L EY  KM    P+Y  +  + 
Sbjct: 68  KAAEQSAAEVALRELAKSSELSQCVSQPVHETGLCKNLLQEYAQKMNYAIPLYQCQKVET 127

Query: 190 -GSVPFFQSTLLFDGVVYTSDLSRTKKEAEQLAARAAILSLHEDATN 234
            G V  F  T+   G+ YT   +RTKK+AE  A R A+L++  D  N
Sbjct: 128 LGRVTQFTCTVEIGGIKYTGAATRTKKDAEISAGRTALLAIQSDTKN 174

[Close]

BLAST of Chy6G118260 vs. ExPASy Swiss-Prot
Match: Q0DJA3 (Double-stranded RNA-binding protein 3 OS=Oryza sativa subsp. japonica OX=39947 GN=DRB3 PE=2 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 3.0e-21
Identity = 71/198 (35.86%), Postives = 101/198 (51.01%), Query Frame = 0


Query: 55  PIP----SAAPAPIPSPNLSDPTQIFVYKNHLHEYAQKAKIAVPVYQTIDEGSPGLPKYR 114
           P+P    + +PAPI +         +V+K+ L EYAQKA +  P Y T  EG    P ++
Sbjct: 9   PLPPETANTSPAPIGATAGIRVENCYVFKSRLQEYAQKAGLQTPEYHTSKEGPSHEPVFK 68

Query: 115 STVMVAEVHYVSPNTFRNRKAAEQDAARIAFEYISKKTMDDAFLLLREDLMLCKSILSEY 174
           STV++    Y S   F NRKAAEQ AA +A   I K    +A +   ++  LCK++L EY
Sbjct: 69  STVVINNTSYGSLPGFSNRKAAEQSAAEVALMEIVKSIPANANIPAVQETGLCKNLLQEY 128

Query: 175 TDKMGLERPIY-TTKHHQGSVPFFQSTLLFDGVVYTSDLSRTKKEAEQLAARAAILSLHE 234
             KM    P Y  TK   G  PF   T+   G+ Y    +RTKK+AE  AAR A+L++  
Sbjct: 129 AQKMNYAIPSYICTKPASGLAPFL-CTVEIGGIQYIGAAARTKKDAEIKAARTALLAIQG 188

Query: 235 DATNPKSQKTLADIIASK 248
            +    +  T   ++  K
Sbjct: 189 QSEGSANGATKYIVVPGK 205

[Close]

BLAST of Chy6G118260 vs. ExPASy Swiss-Prot
Match: Q0IV63 (Double-stranded RNA-binding protein 7 OS=Oryza sativa subsp. japonica OX=39947 GN=DRB7 PE=2 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 3.9e-21
Identity = 75/207 (36.23%), Postives = 104/207 (50.24%), Query Frame = 0


Query: 46  PPSVLP----DLVPIPSAAPAPIPSPNLSDPTQIFVYKNHLHEYAQKAKIAVPVYQTIDE 105
           PP+ LP    +  P P+ A A I   N       +V+K+ L EYAQKA +  P Y T  E
Sbjct: 4   PPTPLPPETANTSPAPNGATAGIRVEN------CYVFKSRLQEYAQKAGLQTPEYHTFKE 63

Query: 106 GSPGLPKYRSTVMVAEVHYVSPNTFRNRKAAEQDAARIAFEYISKKTMDDAFLLLREDLM 165
           G    P ++STV++    Y S   F NRKAAEQ AA +A   I K    +A +   ++  
Sbjct: 64  GPSHEPVFKSTVVINNTSYDSLPGFFNRKAAEQSAAEVALMEIVKSIPANANIPAVQETG 123

Query: 166 LCKSILSEYTDKMGLERPIY-TTKHHQGSVPFFQSTLLFDGVVYTSDLSRTKKEAEQLAA 225
           LCK++L EY  KM    P Y  TK   G  PF   T+   G+ Y    +RTKK+AE  AA
Sbjct: 124 LCKNLLQEYAQKMNYAIPSYICTKSASGLAPFI-CTVEIGGIQYIGAAARTKKDAEIKAA 183

Query: 226 RAAILSLHEDATNPKSQKTLADIIASK 248
           R A+L++   +    +  T   ++  K
Sbjct: 184 RTALLAIQGQSEGSANGATKYIVVPGK 203

[Close]

BLAST of Chy6G118260 vs. ExPASy Swiss-Prot
Match: Q0IQN6 (Double-stranded RNA-binding protein 8 OS=Oryza sativa subsp. japonica OX=39947 GN=DRB8 PE=2 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 1.1e-20
Identity = 74/207 (35.75%), Postives = 103/207 (49.76%), Query Frame = 0


Query: 46  PPSVLP----DLVPIPSAAPAPIPSPNLSDPTQIFVYKNHLHEYAQKAKIAVPVYQTIDE 105
           PP+ LP    +  P P+ A A I   N       +V+K+ L EYAQK  +  P Y T  E
Sbjct: 4   PPTPLPPETANTSPAPNGATAGIRVEN------CYVFKSRLQEYAQKTGLQTPEYHTFKE 63

Query: 106 GSPGLPKYRSTVMVAEVHYVSPNTFRNRKAAEQDAARIAFEYISKKTMDDAFLLLREDLM 165
           G    P ++STV++    Y S   F NRKAAEQ AA +A   I K    +A +   ++  
Sbjct: 64  GPSHEPVFKSTVVINNTSYDSLPGFFNRKAAEQSAAEVALMEIVKSIPANANIPAVQETG 123

Query: 166 LCKSILSEYTDKMGLERPIY-TTKHHQGSVPFFQSTLLFDGVVYTSDLSRTKKEAEQLAA 225
           LCK++L EY  KM    P Y  TK   G  PF   T+   G+ Y    +RTKK+AE  AA
Sbjct: 124 LCKNLLQEYAQKMNYAIPSYICTKSASGLAPFI-CTVEIGGIQYIGAAARTKKDAEIKAA 183

Query: 226 RAAILSLHEDATNPKSQKTLADIIASK 248
           R A+L++   +    +  T   ++  K
Sbjct: 184 RTALLAIQGQSEGSANGATKYIVVPGK 203

[Close]

BLAST of Chy6G118260 vs. ExPASy TrEMBL
Match: A0A1S3C485 (uncharacterized protein LOC103496837 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103496837 PE=4 SV=1)

HSP 1 Score: 675.2 bits (1741), Expect = 1.6e-190
Identity = 350/385 (90.91%), Postives = 364/385 (94.55%), Query Frame = 0


Query: 1   MEESGTVEAGAPQQSPFPSDSVPTVVTPPIPVENSHTLQPQPDIHPPSVLPDLVPIPSAA 60
           ME SGTVEAGAPQQSPF SDSVPTVVTPPIPV+N HTLQ QP+IHPPSVLPDLV IPSAA
Sbjct: 1   MEASGTVEAGAPQQSPFRSDSVPTVVTPPIPVQNFHTLQSQPNIHPPSVLPDLVLIPSAA 60

Query: 61  PAPIPSPNLSDPTQIFVYKNHLHEYAQKAKIAVPVYQTIDEGSPGLPKYRSTVMVAEVHY 120
           PAPIPSPNLSDPTQIFVYKNHLHEYAQKA+IAVPVYQTIDEGSPGLPK+RSTV++ EVHY
Sbjct: 61  PAPIPSPNLSDPTQIFVYKNHLHEYAQKARIAVPVYQTIDEGSPGLPKFRSTVLLDEVHY 120

Query: 121 VSPNTFRNRKAAEQDAARIAFEYISKKTMDDAFLLLREDLMLCKSILSEYTDKMGLERPI 180
           VSPNTFRNR+AAEQDAARIAFEYISKKT DDAFLLLREDL+LCKSILSEYTDKMGLERPI
Sbjct: 121 VSPNTFRNRRAAEQDAARIAFEYISKKTKDDAFLLLREDLILCKSILSEYTDKMGLERPI 180

Query: 181 YTTKHHQGSVPFFQSTLLFDGVVYTSDLSRTKKEAEQLAARAAILSLHEDATNPKSQKTL 240
           YTTKHH+GSVP FQSTL+FDGVVYTSDLSRTKKEAEQLAARAAILSLHEDA N KSQKTL
Sbjct: 181 YTTKHHKGSVPLFQSTLVFDGVVYTSDLSRTKKEAEQLAARAAILSLHEDAINIKSQKTL 240

Query: 241 ADIIASKVRFHAMLQKVKDSHFSQIQPKSMPENTVERVAMTVNEGKELKDAVLDGGVVCS 300
           ADIIASKVRFHAMLQKVKDSHFSQIQPKSMPENTVERVAMTVNE K +KDAV D GVVC 
Sbjct: 241 ADIIASKVRFHAMLQKVKDSHFSQIQPKSMPENTVERVAMTVNEDKNVKDAVSDSGVVCG 300

Query: 301 AISEACPTSQFRPEFSSTKPDGSSPVVRLPIEFVPSTLEEPVGYHATIGSKRKSKNKRKA 360
           AISEACPTS FRPEFSSTKP+GSSP+VRLPIEFVPSTLE PVG HAT GSKR+SKNKRKA
Sbjct: 301 AISEACPTSLFRPEFSSTKPEGSSPLVRLPIEFVPSTLEVPVGDHATTGSKRRSKNKRKA 360

Query: 361 RKKLCTENRVATETSQTAAPCSVAQ 386
           RKKLC EN VATETSQTAAPCSVAQ
Sbjct: 361 RKKLCMENGVATETSQTAAPCSVAQ 385

[Close]

BLAST of Chy6G118260 vs. ExPASy TrEMBL
Match: A0A1S3C4R2 (uncharacterized protein LOC103496837 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103496837 PE=4 SV=1)

HSP 1 Score: 668.7 bits (1724), Expect = 1.5e-188
Identity = 349/385 (90.65%), Postives = 363/385 (94.29%), Query Frame = 0


Query: 1   MEESGTVEAGAPQQSPFPSDSVPTVVTPPIPVENSHTLQPQPDIHPPSVLPDLVPIPSAA 60
           ME SGTVEAGAPQQSPF SDSVPTVVTPPIPV+N HTLQ QP+IHPPSVLPDLV IPSAA
Sbjct: 1   MEASGTVEAGAPQQSPFRSDSVPTVVTPPIPVQNFHTLQSQPNIHPPSVLPDLVLIPSAA 60

Query: 61  PAPIPSPNLSDPTQIFVYKNHLHEYAQKAKIAVPVYQTIDEGSPGLPKYRSTVMVAEVHY 120
           PAPIPSPNLSDPTQIFVYKNHLHEYAQKA+IAVPVYQTIDEGSPGLPK+RSTV++ EVHY
Sbjct: 61  PAPIPSPNLSDPTQIFVYKNHLHEYAQKARIAVPVYQTIDEGSPGLPKFRSTVLLDEVHY 120

Query: 121 VSPNTFRNRKAAEQDAARIAFEYISKKTMDDAFLLLREDLMLCKSILSEYTDKMGLERPI 180
           VSPNTFRNR+AAEQDAARIAFEYISKKT DDAFLLLREDL+LCKSILSEYTDKMGLERPI
Sbjct: 121 VSPNTFRNRRAAEQDAARIAFEYISKKTKDDAFLLLREDLILCKSILSEYTDKMGLERPI 180

Query: 181 YTTKHHQGSVPFFQSTLLFDGVVYTSDLSRTKKEAEQLAARAAILSLHEDATNPKSQKTL 240
           YTTKHH+GSVP FQSTL+FDGVVYTSDLSRTKKEAEQLAARAAILSLH DA N KSQKTL
Sbjct: 181 YTTKHHKGSVPLFQSTLVFDGVVYTSDLSRTKKEAEQLAARAAILSLH-DAINIKSQKTL 240

Query: 241 ADIIASKVRFHAMLQKVKDSHFSQIQPKSMPENTVERVAMTVNEGKELKDAVLDGGVVCS 300
           ADIIASKVRFHAMLQKVKDSHFSQIQPKSMPENTVERVAMTVNE K +KDAV D GVVC 
Sbjct: 241 ADIIASKVRFHAMLQKVKDSHFSQIQPKSMPENTVERVAMTVNEDKNVKDAVSDSGVVCG 300

Query: 301 AISEACPTSQFRPEFSSTKPDGSSPVVRLPIEFVPSTLEEPVGYHATIGSKRKSKNKRKA 360
           AISEACPTS FRPEFSSTKP+GSSP+VRLPIEFVPSTLE PVG HAT GSKR+SKNKRKA
Sbjct: 301 AISEACPTSLFRPEFSSTKPEGSSPLVRLPIEFVPSTLEVPVGDHATTGSKRRSKNKRKA 360

Query: 361 RKKLCTENRVATETSQTAAPCSVAQ 386
           RKKLC EN VATETSQTAAPCSVAQ
Sbjct: 361 RKKLCMENGVATETSQTAAPCSVAQ 384

[Close]

BLAST of Chy6G118260 vs. ExPASy TrEMBL
Match: A0A1S3C4M5 (double-stranded RNA-binding protein 4-like isoform X3 OS=Cucumis melo OX=3656 GN=LOC103496837 PE=4 SV=1)

HSP 1 Score: 555.8 bits (1431), Expect = 1.4e-154
Identity = 299/385 (77.66%), Postives = 313/385 (81.30%), Query Frame = 0


Query: 1   MEESGTVEAGAPQQSPFPSDSVPTVVTPPIPVENSHTLQPQPDIHPPSVLPDLVPIPSAA 60
           ME SGTVEAGAPQQSPF SDSVPTVVTPPIPV+N HTLQ QP+IHPPSVLPDLV IPSAA
Sbjct: 1   MEASGTVEAGAPQQSPFRSDSVPTVVTPPIPVQNFHTLQSQPNIHPPSVLPDLVLIPSAA 60

Query: 61  PAPIPSPNLSDPTQIFVYKNHLHEYAQKAKIAVPVYQTIDEGSPGLPKYRSTVMVAEVHY 120
           PAPIPSPNLSDPTQIFVYKNHLHEYAQKA+IAVPVYQTIDEGSPGLPK+RSTV++ EVHY
Sbjct: 61  PAPIPSPNLSDPTQIFVYKNHLHEYAQKARIAVPVYQTIDEGSPGLPKFRSTVLLDEVHY 120

Query: 121 VSPNTFRNRKAAEQDAARIAFEYISKKTMDDAFLLLREDLMLCKSILSEYTDKMGLERPI 180
           VSPNTFRNR+AAEQDAARIAFEYISKKT DDAFLLLREDL+LCKSILSEYTDKMGLERPI
Sbjct: 121 VSPNTFRNRRAAEQDAARIAFEYISKKTKDDAFLLLREDLILCKSILSEYTDKMGLERPI 180

Query: 181 YTTKHHQGSVPFFQSTLLFDGVVYTSDLSRTKKEAEQLAARAAILSLHEDATNPKSQKTL 240
           YTTKHH+GSVP FQSTL+FDGVVYTSDLSRTKKEAEQLAARAAILSLH            
Sbjct: 181 YTTKHHKGSVPLFQSTLVFDGVVYTSDLSRTKKEAEQLAARAAILSLH------------ 240

Query: 241 ADIIASKVRFHAMLQKVKDSHFSQIQPKSMPENTVERVAMTVNEGKELKDAVLDGGVVCS 300
                                                    VNE K +KDAV D GVVC 
Sbjct: 241 -----------------------------------------VNEDKNVKDAVSDSGVVCG 300

Query: 301 AISEACPTSQFRPEFSSTKPDGSSPVVRLPIEFVPSTLEEPVGYHATIGSKRKSKNKRKA 360
           AISEACPTS FRPEFSSTKP+GSSP+VRLPIEFVPSTLE PVG HAT GSKR+SKNKRKA
Sbjct: 301 AISEACPTSLFRPEFSSTKPEGSSPLVRLPIEFVPSTLEVPVGDHATTGSKRRSKNKRKA 332

Query: 361 RKKLCTENRVATETSQTAAPCSVAQ 386
           RKKLC EN VATETSQTAAPCSVAQ
Sbjct: 361 RKKLCMENGVATETSQTAAPCSVAQ 332

[Close]

BLAST of Chy6G118260 vs. ExPASy TrEMBL
Match: A0A5A7V1Q3 (Double-stranded RNA-binding protein 4-like isoform X3 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold72G00670 PE=4 SV=1)

HSP 1 Score: 545.0 bits (1403), Expect = 2.4e-151
Identity = 291/369 (78.86%), Postives = 305/369 (82.66%), Query Frame = 0


Query: 1   MEESGTVEAGAPQQSPFPSDSVPTVVTPPIPVENSHTLQPQPDIHPPSVLPDLVPIPSAA 60
           ME SGTVEAGAPQQSPF SDSVPTVVTPPIPV+N HTLQ QP+IHPPSVLPDLV IPSAA
Sbjct: 1   MEASGTVEAGAPQQSPFRSDSVPTVVTPPIPVQNFHTLQSQPNIHPPSVLPDLVLIPSAA 60

Query: 61  PAPIPSPNLSDPTQIFVYKNHLHEYAQKAKIAVPVYQTIDEGSPGLPKYRSTVMVAEVHY 120
           PAPIPSPNLSDPTQIFVYKNHLHEYAQKA+IAVPVYQTIDEGSPGLPK+RSTV++ EVHY
Sbjct: 61  PAPIPSPNLSDPTQIFVYKNHLHEYAQKARIAVPVYQTIDEGSPGLPKFRSTVLLDEVHY 120

Query: 121 VSPNTFRNRKAAEQDAARIAFEYISKKTMDDAFLLLREDLMLCKSILSEYTDKMGLERPI 180
           VSPNTFRNR+AAEQDAARIAFEYISKKT DDAFLLLREDL+LCKSILSEYTDKMGLERPI
Sbjct: 121 VSPNTFRNRRAAEQDAARIAFEYISKKTKDDAFLLLREDLILCKSILSEYTDKMGLERPI 180

Query: 181 YTTKHHQGSVPFFQSTLLFDGVVYTSDLSRTKKEAEQLAARAAILSLHEDATNPKSQKTL 240
           YTTKHH+GSVP FQSTL+FDGVVYTSDLSRTKKEAEQLAARAAILSLH            
Sbjct: 181 YTTKHHKGSVPLFQSTLVFDGVVYTSDLSRTKKEAEQLAARAAILSLH------------ 240

Query: 241 ADIIASKVRFHAMLQKVKDSHFSQIQPKSMPENTVERVAMTVNEGKELKDAVLDGGVVCS 300
                                             VERVAMTVNE K +KDAV D GVVC 
Sbjct: 241 ----------------------------------VERVAMTVNEDKNVKDAVSDSGVVCG 300

Query: 301 AISEACPTSQFRPEFSSTKPDGSSPVVRLPIEFVPSTLEEPVGYHATIGSKRKSKNKRKA 360
           AISEACPTS FRPEFSSTKP+GSSP+VRLPIEFVPSTLE PVG HAT GSKR+SKNKRKA
Sbjct: 301 AISEACPTSLFRPEFSSTKPEGSSPLVRLPIEFVPSTLEVPVGDHATTGSKRRSKNKRKA 323

Query: 361 RKKLCTENR 370
           RKKLC ENR
Sbjct: 361 RKKLCMENR 323

[Close]

BLAST of Chy6G118260 vs. ExPASy TrEMBL
Match: A0A6J1F5U3 (double-stranded RNA-binding protein 4-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111442377 PE=4 SV=1)

HSP 1 Score: 520.0 bits (1338), Expect = 8.4e-144
Identity = 283/386 (73.32%), Postives = 314/386 (81.35%), Query Frame = 0


Query: 1   MEESGTVEAGAPQQSPFPSDSVPTVVTPPIPVENSHTLQPQPDIHPPSVLPDLVPIPSAA 60
           +EESGTVEA   QQS FP DS   VV   IPVENS+T Q + D  PP VLPD + IPS+A
Sbjct: 2   VEESGTVEAVPQQQSSFPPDSASAVVPAVIPVENSNTPQLESDTRPPPVLPDAILIPSSA 61

Query: 61  PAPIPSPNLSDPTQIFVYKNHLHEYAQKAKIAVPVYQTIDEGSPGLPKYRSTVMVAEVHY 120
            AP+ SP  SD TQ+F+YKNHLHEY QK++I +PVYQT DEGS G+PKYRSTV+V EVHY
Sbjct: 62  SAPVSSPKPSDLTQLFLYKNHLHEYTQKSRIPLPVYQTFDEGSQGIPKYRSTVVVDEVHY 121

Query: 121 VSPNTFRNRKAAEQDAARIAFEYISKKTMDDAFLLLREDLMLCKSILSEYTDKMGLERPI 180
           VSPNTFRNR+AAEQDAARIA EYISKK  DD F+LL EDLMLCKSILSEYT KM L+RP+
Sbjct: 122 VSPNTFRNRRAAEQDAARIALEYISKKAKDDGFVLLHEDLMLCKSILSEYTVKMSLKRPM 181

Query: 181 YTTKHHQGSVPFFQSTLLFDGVVYTSDLSRTKKEAEQLAARAAILSLHEDATNPKSQKTL 240
           YTTK H+GSVP FQSTL+FDGVVYT D+SR+KKEAEQLAARAAILSLH DA NPKSQKTL
Sbjct: 182 YTTKQHEGSVPIFQSTLVFDGVVYTGDISRSKKEAEQLAARAAILSLH-DAGNPKSQKTL 241

Query: 241 ADIIASKVRFHAMLQKVKDSHFSQIQPKSMPENTVERVAMTVNEGKELKDAVLDGGVVCS 300
           A+IIASKVR HAM+QKVKDSH SQIQPK MP+NTVE V  TVNE KE+  A+LD  V C 
Sbjct: 242 AEIIASKVRLHAMMQKVKDSHPSQIQPKYMPDNTVEHVTTTVNEDKEVNGAILDNVVACG 301

Query: 301 AISEACPT-SQFRPEFSSTKPDGSSPVVRLPIEFVPSTLEEPVGYHATIGSKRKSKNKRK 360
           AISE CPT S   PEF S KP+ SSP  RLPIE VPST EEPVG  AT GSK++SKNKRK
Sbjct: 302 AISEICPTISHLGPEFRSIKPEASSPSERLPIESVPSTSEEPVGDRAT-GSKKRSKNKRK 361

Query: 361 ARKKLCTENRVATETSQTAAPCSVAQ 386
           ARKKLC EN+VAT TSQT APCS+AQ
Sbjct: 362 ARKKLCMENQVATGTSQT-APCSIAQ 384

[Close]

BLAST of Chy6G118260 vs. NCBI nr
Match: XP_004149792.1 (uncharacterized protein LOC101213863 isoform X1 [Cucumis sativus] >KAE8650625.1 hypothetical protein Csa_011062 [Cucumis sativus])

HSP 1 Score: 701 bits (1809), Expect = 1.94e-253
Identity = 359/385 (93.25%), Postives = 371/385 (96.36%), Query Frame = 0


Query: 1   MEESGTVEAGAPQQSPFPSDSVPTVVTPPIPVENSHTLQPQPDIHPPSVLPDLVPIPSAA 60
           MEESGTVEAGAPQQSPFPSDSVPTVVTPPIPVENS+T QPQPDIHPPSVLPDLVPIPSAA
Sbjct: 1   MEESGTVEAGAPQQSPFPSDSVPTVVTPPIPVENSNTFQPQPDIHPPSVLPDLVPIPSAA 60

Query: 61  PAPIPSPNLSDPTQIFVYKNHLHEYAQKAKIAVPVYQTIDEGSPGLPKYRSTVMVAEVHY 120
           PAPIPSPNLSD TQIFVYKNHLHEY QKAKIAVPVYQTIDEGSP LPKYRSTVMV EVHY
Sbjct: 61  PAPIPSPNLSDHTQIFVYKNHLHEYTQKAKIAVPVYQTIDEGSPSLPKYRSTVMVDEVHY 120

Query: 121 VSPNTFRNRKAAEQDAARIAFEYISKKTMDDAFLLLREDLMLCKSILSEYTDKMGLERPI 180
           VSPNTFRNR+AAEQDAAR+AFEYISKKT DDAFLLLREDLMLCKSILSEYTDKMGLERPI
Sbjct: 121 VSPNTFRNRRAAEQDAARVAFEYISKKTKDDAFLLLREDLMLCKSILSEYTDKMGLERPI 180

Query: 181 YTTKHHQGSVPFFQSTLLFDGVVYTSDLSRTKKEAEQLAARAAILSLHEDATNPKSQKTL 240
           YTTKH+QGSV FFQSTL+FDGVVYTSDL RTKKEAEQLAARAAILSLHEDATNPKSQK L
Sbjct: 181 YTTKHNQGSVAFFQSTLVFDGVVYTSDLGRTKKEAEQLAARAAILSLHEDATNPKSQKAL 240

Query: 241 ADIIASKVRFHAMLQKVKDSHFSQIQPKSMPENTVERVAMTVNEGKELKDAVLDGGVVCS 300
            DIIASKVRFHAMLQKVKDS+FSQ QPKSMPENTVERVAMTVNEGKELKDAVLDGG+VC 
Sbjct: 241 GDIIASKVRFHAMLQKVKDSNFSQFQPKSMPENTVERVAMTVNEGKELKDAVLDGGMVCG 300

Query: 301 AISEACPTSQFRPEFSSTKPDGSSPVVRLPIEFVPSTLEEPVGYHATIGSKRKSKNKRKA 360
           AISEACPTSQF+PEFS+TKPDGSSP++RLPIEFV STLEEPVGYHATIGSKRKSKNKRKA
Sbjct: 301 AISEACPTSQFQPEFSATKPDGSSPLMRLPIEFVRSTLEEPVGYHATIGSKRKSKNKRKA 360

Query: 361 RKKLCTENRVATETSQTAAPCSVAQ 385
           RKKLC ENRVATETSQTAAPCSVA+
Sbjct: 361 RKKLCMENRVATETSQTAAPCSVAR 385

[Close]

BLAST of Chy6G118260 vs. NCBI nr
Match: XP_011651405.1 (double-stranded RNA-binding protein 4 isoform X2 [Cucumis sativus])

HSP 1 Score: 694 bits (1792), Expect = 7.26e-251
Identity = 358/385 (92.99%), Postives = 370/385 (96.10%), Query Frame = 0


Query: 1   MEESGTVEAGAPQQSPFPSDSVPTVVTPPIPVENSHTLQPQPDIHPPSVLPDLVPIPSAA 60
           MEESGTVEAGAPQQSPFPSDSVPTVVTPPIPVENS+T QPQPDIHPPSVLPDLVPIPSAA
Sbjct: 1   MEESGTVEAGAPQQSPFPSDSVPTVVTPPIPVENSNTFQPQPDIHPPSVLPDLVPIPSAA 60

Query: 61  PAPIPSPNLSDPTQIFVYKNHLHEYAQKAKIAVPVYQTIDEGSPGLPKYRSTVMVAEVHY 120
           PAPIPSPNLSD TQIFVYKNHLHEY QKAKIAVPVYQTIDEGSP LPKYRSTVMV EVHY
Sbjct: 61  PAPIPSPNLSDHTQIFVYKNHLHEYTQKAKIAVPVYQTIDEGSPSLPKYRSTVMVDEVHY 120

Query: 121 VSPNTFRNRKAAEQDAARIAFEYISKKTMDDAFLLLREDLMLCKSILSEYTDKMGLERPI 180
           VSPNTFRNR+AAEQDAAR+AFEYISKKT DDAFLLLREDLMLCKSILSEYTDKMGLERPI
Sbjct: 121 VSPNTFRNRRAAEQDAARVAFEYISKKTKDDAFLLLREDLMLCKSILSEYTDKMGLERPI 180

Query: 181 YTTKHHQGSVPFFQSTLLFDGVVYTSDLSRTKKEAEQLAARAAILSLHEDATNPKSQKTL 240
           YTTKH+QGSV FFQSTL+FDGVVYTSDL RTKKEAEQLAARAAILSLH DATNPKSQK L
Sbjct: 181 YTTKHNQGSVAFFQSTLVFDGVVYTSDLGRTKKEAEQLAARAAILSLH-DATNPKSQKAL 240

Query: 241 ADIIASKVRFHAMLQKVKDSHFSQIQPKSMPENTVERVAMTVNEGKELKDAVLDGGVVCS 300
            DIIASKVRFHAMLQKVKDS+FSQ QPKSMPENTVERVAMTVNEGKELKDAVLDGG+VC 
Sbjct: 241 GDIIASKVRFHAMLQKVKDSNFSQFQPKSMPENTVERVAMTVNEGKELKDAVLDGGMVCG 300

Query: 301 AISEACPTSQFRPEFSSTKPDGSSPVVRLPIEFVPSTLEEPVGYHATIGSKRKSKNKRKA 360
           AISEACPTSQF+PEFS+TKPDGSSP++RLPIEFV STLEEPVGYHATIGSKRKSKNKRKA
Sbjct: 301 AISEACPTSQFQPEFSATKPDGSSPLMRLPIEFVRSTLEEPVGYHATIGSKRKSKNKRKA 360

Query: 361 RKKLCTENRVATETSQTAAPCSVAQ 385
           RKKLC ENRVATETSQTAAPCSVA+
Sbjct: 361 RKKLCMENRVATETSQTAAPCSVAR 384

[Close]

BLAST of Chy6G118260 vs. NCBI nr
Match: XP_008457066.1 (PREDICTED: uncharacterized protein LOC103496837 isoform X1 [Cucumis melo])

HSP 1 Score: 676 bits (1745), Expect = 1.09e-243
Identity = 350/385 (90.91%), Postives = 364/385 (94.55%), Query Frame = 0


Query: 1   MEESGTVEAGAPQQSPFPSDSVPTVVTPPIPVENSHTLQPQPDIHPPSVLPDLVPIPSAA 60
           ME SGTVEAGAPQQSPF SDSVPTVVTPPIPV+N HTLQ QP+IHPPSVLPDLV IPSAA
Sbjct: 1   MEASGTVEAGAPQQSPFRSDSVPTVVTPPIPVQNFHTLQSQPNIHPPSVLPDLVLIPSAA 60

Query: 61  PAPIPSPNLSDPTQIFVYKNHLHEYAQKAKIAVPVYQTIDEGSPGLPKYRSTVMVAEVHY 120
           PAPIPSPNLSDPTQIFVYKNHLHEYAQKA+IAVPVYQTIDEGSPGLPK+RSTV++ EVHY
Sbjct: 61  PAPIPSPNLSDPTQIFVYKNHLHEYAQKARIAVPVYQTIDEGSPGLPKFRSTVLLDEVHY 120

Query: 121 VSPNTFRNRKAAEQDAARIAFEYISKKTMDDAFLLLREDLMLCKSILSEYTDKMGLERPI 180
           VSPNTFRNR+AAEQDAARIAFEYISKKT DDAFLLLREDL+LCKSILSEYTDKMGLERPI
Sbjct: 121 VSPNTFRNRRAAEQDAARIAFEYISKKTKDDAFLLLREDLILCKSILSEYTDKMGLERPI 180

Query: 181 YTTKHHQGSVPFFQSTLLFDGVVYTSDLSRTKKEAEQLAARAAILSLHEDATNPKSQKTL 240
           YTTKHH+GSVP FQSTL+FDGVVYTSDLSRTKKEAEQLAARAAILSLHEDA N KSQKTL
Sbjct: 181 YTTKHHKGSVPLFQSTLVFDGVVYTSDLSRTKKEAEQLAARAAILSLHEDAINIKSQKTL 240

Query: 241 ADIIASKVRFHAMLQKVKDSHFSQIQPKSMPENTVERVAMTVNEGKELKDAVLDGGVVCS 300
           ADIIASKVRFHAMLQKVKDSHFSQIQPKSMPENTVERVAMTVNE K +KDAV D GVVC 
Sbjct: 241 ADIIASKVRFHAMLQKVKDSHFSQIQPKSMPENTVERVAMTVNEDKNVKDAVSDSGVVCG 300

Query: 301 AISEACPTSQFRPEFSSTKPDGSSPVVRLPIEFVPSTLEEPVGYHATIGSKRKSKNKRKA 360
           AISEACPTS FRPEFSSTKP+GSSP+VRLPIEFVPSTLE PVG HAT GSKR+SKNKRKA
Sbjct: 301 AISEACPTSLFRPEFSSTKPEGSSPLVRLPIEFVPSTLEVPVGDHATTGSKRRSKNKRKA 360

Query: 361 RKKLCTENRVATETSQTAAPCSVAQ 385
           RKKLC EN VATETSQTAAPCSVAQ
Sbjct: 361 RKKLCMENGVATETSQTAAPCSVAQ 385

[Close]

BLAST of Chy6G118260 vs. NCBI nr
Match: XP_008457067.1 (PREDICTED: uncharacterized protein LOC103496837 isoform X2 [Cucumis melo])

HSP 1 Score: 670 bits (1728), Expect = 4.09e-241
Identity = 349/385 (90.65%), Postives = 363/385 (94.29%), Query Frame = 0


Query: 1   MEESGTVEAGAPQQSPFPSDSVPTVVTPPIPVENSHTLQPQPDIHPPSVLPDLVPIPSAA 60
           ME SGTVEAGAPQQSPF SDSVPTVVTPPIPV+N HTLQ QP+IHPPSVLPDLV IPSAA
Sbjct: 1   MEASGTVEAGAPQQSPFRSDSVPTVVTPPIPVQNFHTLQSQPNIHPPSVLPDLVLIPSAA 60

Query: 61  PAPIPSPNLSDPTQIFVYKNHLHEYAQKAKIAVPVYQTIDEGSPGLPKYRSTVMVAEVHY 120
           PAPIPSPNLSDPTQIFVYKNHLHEYAQKA+IAVPVYQTIDEGSPGLPK+RSTV++ EVHY
Sbjct: 61  PAPIPSPNLSDPTQIFVYKNHLHEYAQKARIAVPVYQTIDEGSPGLPKFRSTVLLDEVHY 120

Query: 121 VSPNTFRNRKAAEQDAARIAFEYISKKTMDDAFLLLREDLMLCKSILSEYTDKMGLERPI 180
           VSPNTFRNR+AAEQDAARIAFEYISKKT DDAFLLLREDL+LCKSILSEYTDKMGLERPI
Sbjct: 121 VSPNTFRNRRAAEQDAARIAFEYISKKTKDDAFLLLREDLILCKSILSEYTDKMGLERPI 180

Query: 181 YTTKHHQGSVPFFQSTLLFDGVVYTSDLSRTKKEAEQLAARAAILSLHEDATNPKSQKTL 240
           YTTKHH+GSVP FQSTL+FDGVVYTSDLSRTKKEAEQLAARAAILSLH DA N KSQKTL
Sbjct: 181 YTTKHHKGSVPLFQSTLVFDGVVYTSDLSRTKKEAEQLAARAAILSLH-DAINIKSQKTL 240

Query: 241 ADIIASKVRFHAMLQKVKDSHFSQIQPKSMPENTVERVAMTVNEGKELKDAVLDGGVVCS 300
           ADIIASKVRFHAMLQKVKDSHFSQIQPKSMPENTVERVAMTVNE K +KDAV D GVVC 
Sbjct: 241 ADIIASKVRFHAMLQKVKDSHFSQIQPKSMPENTVERVAMTVNEDKNVKDAVSDSGVVCG 300

Query: 301 AISEACPTSQFRPEFSSTKPDGSSPVVRLPIEFVPSTLEEPVGYHATIGSKRKSKNKRKA 360
           AISEACPTS FRPEFSSTKP+GSSP+VRLPIEFVPSTLE PVG HAT GSKR+SKNKRKA
Sbjct: 301 AISEACPTSLFRPEFSSTKPEGSSPLVRLPIEFVPSTLEVPVGDHATTGSKRRSKNKRKA 360

Query: 361 RKKLCTENRVATETSQTAAPCSVAQ 385
           RKKLC EN VATETSQTAAPCSVAQ
Sbjct: 361 RKKLCMENGVATETSQTAAPCSVAQ 384

[Close]

BLAST of Chy6G118260 vs. NCBI nr
Match: XP_038897078.1 (double-stranded RNA-binding protein 8-like isoform X1 [Benincasa hispida] >XP_038897083.1 double-stranded RNA-binding protein 8-like isoform X1 [Benincasa hispida])

HSP 1 Score: 616 bits (1588), Expect = 9.24e-220
Identity = 320/386 (82.90%), Postives = 344/386 (89.12%), Query Frame = 0


Query: 1   MEESGTVEAGAPQQSPFPSDSVPTVVTPPIPVENSHTLQPQPDIHPPSVLPDLVPIPSAA 60
           MEESGTVEA APQQS FP DSVPTVVTPP+PV+NS T QP+ DIHPPSVLPD + +PS A
Sbjct: 2   MEESGTVEADAPQQSAFPPDSVPTVVTPPVPVQNSTTSQPEADIHPPSVLPDAILVPSVA 61

Query: 61  PAPIPSPNLSDPTQIFVYKNHLHEYAQKAKIAVPVYQTIDEGSPGLPKYRSTVMVAEVHY 120
           PAP+ SPN SDPTQ+ +YKNHLHEY QK++I +PVYQT +EGS G+PKYRSTVMV EVHY
Sbjct: 62  PAPVLSPNPSDPTQLSLYKNHLHEYTQKSRIQLPVYQTFNEGSLGVPKYRSTVMVDEVHY 121

Query: 121 VSPNTFRNRKAAEQDAARIAFEYISKKTMDDAFLLLREDLMLCKSILSEYTDKMGLERPI 180
           VSPNTFRNRKAAEQDAARIAFEYISKKT DD FLLLREDLM CKSILSEYTDKM L+RPI
Sbjct: 122 VSPNTFRNRKAAEQDAARIAFEYISKKTKDDGFLLLREDLMSCKSILSEYTDKMSLKRPI 181

Query: 181 YTTKHHQGSVPFFQSTLLFDGVVYTSDLSRTKKEAEQLAARAAILSLHEDATNPKSQKTL 240
           YTTKHH+GSVPFFQSTL FDGVVYTSD+SR+KKEAEQLAARAAILSLH DA NPKSQKTL
Sbjct: 182 YTTKHHKGSVPFFQSTLDFDGVVYTSDVSRSKKEAEQLAARAAILSLHGDARNPKSQKTL 241

Query: 241 ADIIASKVRFHAMLQKVKDSHFSQIQPKSMPENTVERVAMTVNEGKELKDAVLDGGVVCS 300
           A+IIASKVRFHA LQKVKDSHFSQIQPKSMPEN VE VAMTV+E KE+KDA+LD GVVC 
Sbjct: 242 AEIIASKVRFHATLQKVKDSHFSQIQPKSMPENKVEHVAMTVDENKEVKDAILDNGVVCG 301

Query: 301 AISEACPTSQFRPEFSSTKPDGSSPVVRLPIEFVPSTLEEPVGYHA-TIGSKRKSKNKRK 360
           AISE CPTS FRPEF STKP+ SSP VRLPIEFVPSTLEEPVG HA   GSKR+SKNKRK
Sbjct: 302 AISEVCPTSHFRPEFRSTKPEASSPPVRLPIEFVPSTLEEPVGDHARATGSKRRSKNKRK 361

Query: 361 ARKKLCTENRVATETSQTAAPCSVAQ 385
           ARKKLC EN+V TETSQTA PCSVAQ
Sbjct: 362 ARKKLCMENQVTTETSQTA-PCSVAQ 386

[Close]

BLAST of Chy6G118260 vs. TAIR 10
Match: AT1G09700.1 (dsRNA-binding domain-like superfamily protein )

HSP 1 Score: 104.4 bits (259), Expect = 2.1e-22
Identity = 62/167 (37.13%), Postives = 91/167 (54.49%), Query Frame = 0


Query: 70  SDPTQIFVYKNHLHEYAQKAKIAVPVYQTIDEGSPGLPKYRSTVMVAEVHYVSPNTFRNR 129
           S  +  +V+K+ L EYAQK K+  PVY+ + EG      ++STV++  V Y S   F NR
Sbjct: 8   SGVSNCYVFKSRLQEYAQKYKLPTPVYEIVKEGPSHKSLFQSTVILDGVRYNSLPGFFNR 67

Query: 130 KAAEQDAARIAFEYISKKT-MDDAFLLLREDLMLCKSILSEYTDKMGLERPIYTTKHHQ- 189
           KAAEQ AA +A   ++K + +         +  LCK++L EY  KM    P+Y  +  + 
Sbjct: 68  KAAEQSAAEVALRELAKSSELSQCVSQPVHETGLCKNLLQEYAQKMNYAIPLYQCQKVET 127

Query: 190 -GSVPFFQSTLLFDGVVYTSDLSRTKKEAEQLAARAAILSLHEDATN 234
            G V  F  T+   G+ YT   +RTKK+AE  A R A+L++  D  N
Sbjct: 128 LGRVTQFTCTVEIGGIKYTGAATRTKKDAEISAGRTALLAIQSDTKN 174

[Close]

BLAST of Chy6G118260 vs. TAIR 10
Match: AT2G28380.1 (dsRNA-binding protein 2 )

HSP 1 Score: 76.6 bits (187), Expect = 4.7e-14
Identity = 50/162 (30.86%), Postives = 81/162 (50.00%), Query Frame = 0


Query: 77  VYKNHLHEYAQKAKIAVPVYQTIDEGSPGLPKYRSTVMVAEVHYVSPNTFRNRKAAEQDA 136
           +YKN L E AQ++   +P Y  I EG    P++++TV      + SP      + AE  A
Sbjct: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFESPQYCSTLRQAEHSA 60

Query: 137 ARIAFEYISKKTMDDAFLL-LREDLMLCKSILSEYTDKMGLERPIYTT-KHHQGSVPFFQ 196
           A +A   +S +    +    + ++  + K++L E   ++G   P YTT +   G  P F 
Sbjct: 61  AEVALNALSNRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPRYTTFRSGLGHQPVFT 120

Query: 197 STLLFDGVVYTSDLSRTKKEAEQLAARAAILSLHEDATNPKS 237
            T+   G+ +T D ++ KK+AE+ AA AA  SL + A    S
Sbjct: 121 GTVELAGITFTGDPAKNKKQAEKNAAMAAWSSLKQLAKETSS 162

[Close]

BLAST of Chy6G118260 vs. TAIR 10
Match: AT3G26932.1 (dsRNA-binding protein 3 )

HSP 1 Score: 76.3 bits (186), Expect = 6.2e-14
Identity = 46/155 (29.68%), Postives = 82/155 (52.90%), Query Frame = 0


Query: 77  VYKNHLHEYAQKAKIAVPVYQTIDEGSPGLPKYRSTVMVAEVHYVSPNTFRNRKAAEQDA 136
           +YKN L E AQ++  ++P Y    EG    P+++++V      + SP      + AE  A
Sbjct: 1   MYKNQLQELAQRSCFSLPSYTCTREGPDHAPRFKASVNFNGEIFESPTYCSTLRQAEHSA 60

Query: 137 ARIAFEYISKKTMDDAFLL-LREDLMLCKSILSEYTDKMGLERPIYTT-KHHQGSVPFFQ 196
           A +A   +S K    +    + ++  + K++L E   + GL+ P+YT+ +   G +P F 
Sbjct: 61  AEVALSALSSKGPSKSLTARVLDETGIYKNLLQETAHRAGLDLPVYTSVRSGPGHIPTFS 120

Query: 197 STLLFDGVVYTSDLSRTKKEAEQLAARAAILSLHE 230
            T+   G+ +  + ++TKK+AE+ AA AA  SL +
Sbjct: 121 CTVELAGMSFNGESAKTKKQAEKNAAIAAWFSLRK 155

[Close]

BLAST of Chy6G118260 vs. TAIR 10
Match: AT3G26932.2 (dsRNA-binding protein 3 )

HSP 1 Score: 76.3 bits (186), Expect = 6.2e-14
Identity = 46/155 (29.68%), Postives = 82/155 (52.90%), Query Frame = 0


Query: 77  VYKNHLHEYAQKAKIAVPVYQTIDEGSPGLPKYRSTVMVAEVHYVSPNTFRNRKAAEQDA 136
           +YKN L E AQ++  ++P Y    EG    P+++++V      + SP      + AE  A
Sbjct: 1   MYKNQLQELAQRSCFSLPSYTCTREGPDHAPRFKASVNFNGEIFESPTYCSTLRQAEHSA 60

Query: 137 ARIAFEYISKKTMDDAFLL-LREDLMLCKSILSEYTDKMGLERPIYTT-KHHQGSVPFFQ 196
           A +A   +S K    +    + ++  + K++L E   + GL+ P+YT+ +   G +P F 
Sbjct: 61  AEVALSALSSKGPSKSLTARVLDETGIYKNLLQETAHRAGLDLPVYTSVRSGPGHIPTFS 120

Query: 197 STLLFDGVVYTSDLSRTKKEAEQLAARAAILSLHE 230
            T+   G+ +  + ++TKK+AE+ AA AA  SL +
Sbjct: 121 CTVELAGMSFNGESAKTKKQAEKNAAIAAWFSLRK 155

[Close]

BLAST of Chy6G118260 vs. TAIR 10
Match: AT3G62800.1 (double-stranded-RNA-binding protein 4 )

HSP 1 Score: 73.2 bits (178), Expect = 5.2e-13
Identity = 51/165 (30.91%), Postives = 77/165 (46.67%), Query Frame = 0


Query: 77  VYKNHLHEYAQKAKIAVPVYQTIDEGSPGLPKYRSTVMVAEVHYVSPNTFRNRKAAEQDA 136
           VYK  L  YA +  + +PVY    EG P  P++R  V      + S   F   K+AE  A
Sbjct: 4   VYKGQLQAYALQHNLELPVYANEREGPPHAPRFRCNVTFCGQTFQSSEFFPTLKSAEHAA 63

Query: 137 ARIAFEYISKKTMDDAFLLLREDLMLCKSILSEYTDKMGLERPIYTTKHHQGS-VPFFQS 196
           A+IA   ++ ++ +   +         K++L E   K     P Y T     S  P F S
Sbjct: 64  AKIAVASLTPQSPEGIDVAY-------KNLLQEIAQKESSLLPFYATATSGPSHAPTFTS 123

Query: 197 TLLFDGVVYTSDLSRTKKEAEQLAARAAILSLHEDATNPKSQKTL 241
           T+ F G V++ + ++TKK AE  AA+ A +S+    +N     TL
Sbjct: 124 TVEFAGKVFSGEEAKTKKLAEMSAAKVAFMSIKNGNSNQTGSPTL 161

The following BLAST results are available for this feature:

BLAST of Chy6G118260 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6YW64	9.3e-23	40.00	Double-stranded RNA-binding protein 4 OS=Oryza sativa subsp. japonica OX=39947 G...	[more]
O04492	3.0e-21	37.13	Double-stranded RNA-binding protein 1 OS=Arabidopsis thaliana OX=3702 GN=DRB1 PE...	[more]
Q0DJA3	3.0e-21	35.86	Double-stranded RNA-binding protein 3 OS=Oryza sativa subsp. japonica OX=39947 G...	[more]
Q0IV63	3.9e-21	36.23	Double-stranded RNA-binding protein 7 OS=Oryza sativa subsp. japonica OX=39947 G...	[more]
Q0IQN6	1.1e-20	35.75	Double-stranded RNA-binding protein 8 OS=Oryza sativa subsp. japonica OX=39947 G...	[more]

BLAST of Chy6G118260 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3C485	1.6e-190	90.91	uncharacterized protein LOC103496837 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A1S3C4R2	1.5e-188	90.65	uncharacterized protein LOC103496837 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A1S3C4M5	1.4e-154	77.66	double-stranded RNA-binding protein 4-like isoform X3 OS=Cucumis melo OX=3656 GN...	[more]
A0A5A7V1Q3	2.4e-151	78.86	Double-stranded RNA-binding protein 4-like isoform X3 OS=Cucumis melo var. makuw...	[more]
A0A6J1F5U3	8.4e-144	73.32	double-stranded RNA-binding protein 4-like isoform X1 OS=Cucurbita moschata OX=3...	[more]

BLAST of Chy6G118260 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004149792.1	1.94e-253	93.25	uncharacterized protein LOC101213863 isoform X1 [Cucumis sativus] >KAE8650625.1 ...	[more]
XP_011651405.1	7.26e-251	92.99	double-stranded RNA-binding protein 4 isoform X2 [Cucumis sativus]	[more]
XP_008457066.1	1.09e-243	90.91	PREDICTED: uncharacterized protein LOC103496837 isoform X1 [Cucumis melo]	[more]
XP_008457067.1	4.09e-241	90.65	PREDICTED: uncharacterized protein LOC103496837 isoform X2 [Cucumis melo]	[more]
XP_038897078.1	9.24e-220	82.90	double-stranded RNA-binding protein 8-like isoform X1 [Benincasa hispida] >XP_03...	[more]

BLAST of Chy6G118260 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G09700.1	2.1e-22	37.13	dsRNA-binding domain-like superfamily protein	[more]
AT2G28380.1	4.7e-14	30.86	dsRNA-binding protein 2	[more]
AT3G26932.1	6.2e-14	29.68	dsRNA-binding protein 3	[more]
AT3G26932.2	6.2e-14	29.68	dsRNA-binding protein 3	[more]
AT3G62800.1	5.2e-13	30.91	double-stranded-RNA-binding protein 4	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014720	Double-stranded RNA-binding domain	SMART	SM00358	DRBM_3	coord: 78..145 e-value: 5.0E-11 score: 52.6 coord: 163..228 e-value: 2.3E-5 score: 33.8
IPR014720	Double-stranded RNA-binding domain	PFAM	PF00035	dsrm	coord: 78..143 e-value: 2.6E-9 score: 37.7 coord: 164..227 e-value: 8.3E-10 score: 39.2
IPR014720	Double-stranded RNA-binding domain	PROSITE	PS50137	DS_RBD	coord: 77..146 score: 11.237091
IPR014720	Double-stranded RNA-binding domain	PROSITE	PS50137	DS_RBD	coord: 193..229 score: 8.542421
None	No IPR available	GENE3D	3.30.160.20		coord: 154..232 e-value: 1.9E-17 score: 64.6 coord: 66..150 e-value: 2.6E-18 score: 67.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..46
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 369..385
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 350..364
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 28..42
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 348..385
None	No IPR available	PANTHER	PTHR11207:SF26	DOUBLE-STRANDED RNA-BINDING PROTEIN 4	coord: 64..361
None	No IPR available	SUPERFAMILY	54768	dsRNA-binding domain-like	coord: 160..227
None	No IPR available	SUPERFAMILY	54768	dsRNA-binding domain-like	coord: 73..144
IPR011907	Ribonuclease III	PANTHER	PTHR11207	RIBONUCLEASE III	coord: 64..361

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy6G118260.1	Chy6G118260.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic
biological_process	GO:0016075	rRNA catabolic process
molecular_function	GO:0004525	ribonuclease III activity
molecular_function	GO:0003723	RNA binding