Chy6G117880 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAGTAGTTGATAATAATGAAATGAAAGAGGAGATTGTTCAGCTTCTGATTGAGAATAATGTTTTGGCTGTTGAGAGGAAGAAGGCTGAAAGTGAGGCTGAGCTGTGGAAAGATTTCAAACAATTGGAGATTCAGATTTCAAAAATGAATGAAAGGAAAGGTGATGGGAAGCCAGTGCTTTGTGGGAAGTTTGAAGGGGGAATTGGATTATCAATGAGTCCTGAAACTCGTGGTTTGGATGGTGTGGCCTCTGATCATTATGCTTTTAGTAAAGAAATTAGAAACTTTGAAGCAGGTATTCTTTTTCTTTAATATTGTTTTTGTTCTCTTAATTGCATAAAGGTTATTTGGTATAACTTTTCTAAGTCTTTAGTTCGGACAACCACTTAAAATAGCTTATTATAAGTAGTCTTATTTTTTCTAAATCCAAACAGTTTGGATAAAAATAACTTTTTTGAAAAACAATTTGTTGGAATGCTTTGAATCTGTGATCTGGAGCTTTGAAATAACCAAGTATTAGGTTTCACTCTACCTTTGACATAGTTAACGCACTGTTAATGAACCCCGTATGTCTTTGCGTTGATTTTCTATTGCTTTACGTTTTTTCTAGTTTCTTTATTTATCAACTCCATAACACACTTATCCGAGTCTAAGACAACCGCCCAAGAAAACAGTGATTTGAAGGATTTGATTGTAAAATATTGAATATCTTTGATTTGTATTCATGAAGGTTTTAACCAGCGCATGTGTTAAATGAATTTCTTGTTGCTTTTAACCTGATTTTTCCTGGATGACTGAATTCTAAATAACTTTTTTCCTTTTGTTTGGTGGATATACTCTAATGATAGGAACACCTCCAAATGGCTCATCACCCAATCCTACTGTTTCTTTTGGGCAAGGGAAAAAACGTGGTGCTATAGAATATTAGAATCTCGTTTCAAGCATGGTAATCGAATTCTAAACAACTTTTTTCCTTGTGTTTTGTGCAAGTAGAGAAGTGAGATTACACCAAGGGTACTTGTTGATGAATTTTGTTGACTCGCTGTAATTTCTCTAATAGGGGCACCTGGCTGAGTTTCTCAGCTATGGTGATCTACAAGGTAATCTCAAAAAATCTGTTAAAGAGTTGGAGGAGTATGACCCAAAGACCATTGAGCTGTACAGAAATTTAGCCACACATTACTCCAAGCAGTTGTTTGAGATCTATGGAAATGAAGAAGATCCTTTCCTTTTACCTGCATGA ATGGAAGTAGTTGATAATAATGAAATGAAAGAGGAGATTGTTCAGCTTCTGATTGAGAATAATGTTTTGGCTGTTGAGAGGAAGAAGGCTGAAAGTGAGGCTGAGCTGTGGAAAGATTTCAAACAATTGGAGATTCAGATTTCAAAAATGAATGAAAGGAAAGGTGATGGGAAGCCAGTGCTTTGTGGGAAGTTTGAAGGGGGAATTGGATTATCAATGAGTCCTGAAACTCGTGGTTTGGATGGTGTGGCCTCTGATCATTATGCTTTTAGTAAAGAAATTAGAAACTTTGAAGCAGGTAATCTCAAAAAATCTGTTAAAGAGTTGGAGGAGTATGACCCAAAGACCATTGAGCTGTACAGAAATTTAGCCACACATTACTCCAAGCAGTTGTTTGAGATCTATGGAAATGAAGAAGATCCTTTCCTTTTACCTGCATGA ATGGAAGTAGTTGATAATAATGAAATGAAAGAGGAGATTGTTCAGCTTCTGATTGAGAATAATGTTTTGGCTGTTGAGAGGAAGAAGGCTGAAAGTGAGGCTGAGCTGTGGAAAGATTTCAAACAATTGGAGATTCAGATTTCAAAAATGAATGAAAGGAAAGGTGATGGGAAGCCAGTGCTTTGTGGGAAGTTTGAAGGGGGAATTGGATTATCAATGAGTCCTGAAACTCGTGGTTTGGATGGTGTGGCCTCTGATCATTATGCTTTTAGTAAAGAAATTAGAAACTTTGAAGCAGGTAATCTCAAAAAATCTGTTAAAGAGTTGGAGGAGTATGACCCAAAGACCATTGAGCTGTACAGAAATTTAGCCACACATTACTCCAAGCAGTTGTTTGAGATCTATGGAAATGAAGAAGATCCTTTCCTTTTACCTGCATGA MEVVDNNEMKEEIVQLLIENNVLAVERKKAESEAELWKDFKQLEIQISKMNERKGDGKPVLCGKFEGGIGLSMSPETRGLDGVASDHYAFSKEIRNFEAGNLKKSVKELEEYDPKTIELYRNLATHYSKQLFEIYGNEEDPFLLPA* Homology
BLAST of Chy6G117880 vs. ExPASy TrEMBL
Match: A0A1S3CNR9 (uncharacterized protein LOC103503017 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103503017 PE=4 SV=1) HSP 1 Score: 151.0 bits (380), Expect = 3.9e-33 Identity = 80/101 (79.21%), Postives = 87/101 (86.14%), Query Frame = 0
BLAST of Chy6G117880 vs. ExPASy TrEMBL
Match: A0A1S3CNR9 (uncharacterized protein LOC103503017 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103503017 PE=4 SV=1) HSP 1 Score: 86.7 bits (213), Expect = 9.1e-14 Identity = 41/47 (87.23%), Postives = 42/47 (89.36%), Query Frame = 0
HSP 2 Score: 145.2 bits (365), Expect = 2.2e-31 Identity = 77/96 (80.21%), Postives = 84/96 (87.50%), Query Frame = 0
BLAST of Chy6G117880 vs. ExPASy TrEMBL
Match: A0A5A7UA97 (Protein IWS1-like protein A isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold175G00740 PE=4 SV=1) HSP 1 Score: 86.7 bits (213), Expect = 9.1e-14 Identity = 41/47 (87.23%), Postives = 42/47 (89.36%), Query Frame = 0
HSP 2 Score: 135.6 bits (340), Expect = 1.7e-28 Identity = 71/91 (78.02%), Postives = 79/91 (86.81%), Query Frame = 0
BLAST of Chy6G117880 vs. ExPASy TrEMBL
Match: A0A5D3BWC5 (Protein IWS1-like protein A isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold11G00170 PE=4 SV=1) HSP 1 Score: 86.7 bits (213), Expect = 9.1e-14 Identity = 41/47 (87.23%), Postives = 42/47 (89.36%), Query Frame = 0
HSP 2 Score: 114.8 bits (286), Expect = 3.1e-22 Identity = 59/76 (77.63%), Postives = 64/76 (84.21%), Query Frame = 0
BLAST of Chy6G117880 vs. ExPASy TrEMBL
Match: A0A1S3CNP3 (uncharacterized protein LOC103503017 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103503017 PE=4 SV=1) HSP 1 Score: 86.7 bits (213), Expect = 9.1e-14 Identity = 41/47 (87.23%), Postives = 42/47 (89.36%), Query Frame = 0
HSP 2 Score: 97.8 bits (242), Expect = 3.9e-17 Identity = 55/103 (53.40%), Postives = 74/103 (71.84%), Query Frame = 0
BLAST of Chy6G117880 vs. NCBI nr
Match: XP_008465383.1 (PREDICTED: uncharacterized protein LOC103503017 isoform X1 [Cucumis melo] >XP_008465384.1 PREDICTED: uncharacterized protein LOC103503017 isoform X1 [Cucumis melo] >XP_008465385.1 PREDICTED: uncharacterized protein LOC103503017 isoform X1 [Cucumis melo] >XP_008465386.1 PREDICTED: uncharacterized protein LOC103503017 isoform X1 [Cucumis melo]) HSP 1 Score: 149 bits (376), Expect = 6.78e-39 Identity = 80/98 (81.63%), Postives = 85/98 (86.73%), Query Frame = 0
BLAST of Chy6G117880 vs. NCBI nr
Match: XP_038898046.1 (uncharacterized protein LOC120085872 [Benincasa hispida]) HSP 1 Score: 147 bits (372), Expect = 2.11e-38 Identity = 78/98 (79.59%), Postives = 85/98 (86.73%), Query Frame = 0
BLAST of Chy6G117880 vs. NCBI nr
Match: KAA0050461.1 (protein IWS1-like protein A isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 144 bits (362), Expect = 6.15e-37 Identity = 77/93 (82.80%), Postives = 82/93 (88.17%), Query Frame = 0
BLAST of Chy6G117880 vs. NCBI nr
Match: TYK03142.1 (protein IWS1-like protein A isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 134 bits (336), Expect = 2.64e-33 Identity = 71/88 (80.68%), Postives = 77/88 (87.50%), Query Frame = 0
BLAST of Chy6G117880 vs. NCBI nr
Match: XP_008465387.1 (PREDICTED: uncharacterized protein LOC103503017 isoform X2 [Cucumis melo]) HSP 1 Score: 113 bits (282), Expect = 6.73e-26 Identity = 59/76 (77.63%), Postives = 64/76 (84.21%), Query Frame = 0
BLAST of Chy6G117880 vs. TAIR 10
Match: AT5G53220.1 (unknown protein; Has 3099 Blast hits to 2528 proteins in 332 species: Archae - 2; Bacteria - 245; Metazoa - 1059; Fungi - 555; Plants - 177; Viruses - 49; Other Eukaryotes - 1012 (source: NCBI BLink). ) HSP 1 Score: 56.2 bits (134), Expect = 2.5e-08 Identity = 26/44 (59.09%), Postives = 33/44 (75.00%), Query Frame = 0
BLAST of Chy6G117880 vs. TAIR 10
Match: AT5G53220.2 (unknown protein; Has 3081 Blast hits to 2526 proteins in 331 species: Archae - 2; Bacteria - 227; Metazoa - 1059; Fungi - 555; Plants - 177; Viruses - 49; Other Eukaryotes - 1012 (source: NCBI BLink). ) HSP 1 Score: 56.2 bits (134), Expect = 2.5e-08 Identity = 26/44 (59.09%), Postives = 33/44 (75.00%), Query Frame = 0
BLAST of Chy6G117880 vs. TAIR 10
Match: AT5G53220.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 56.2 bits (134), Expect = 2.5e-08 Identity = 26/44 (59.09%), Postives = 33/44 (75.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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