Chy6G117880 (gene) Cucumber (hystrix) v1

Overview
NameChy6G117880
Typegene
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionProtein IWS1-like protein A isoform X1
LocationchrH06: 11588306 .. 11589551 (+)
RNA-Seq ExpressionChy6G117880
SyntenyChy6G117880
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGTAGTTGATAATAATGAAATGAAAGAGGAGATTGTTCAGCTTCTGATTGAGAATAATGTTTTGGCTGTTGAGAGGAAGAAGGCTGAAAGTGAGGCTGAGCTGTGGAAAGATTTCAAACAATTGGAGATTCAGATTTCAAAAATGAATGAAAGGAAAGGTGATGGGAAGCCAGTGCTTTGTGGGAAGTTTGAAGGGGGAATTGGATTATCAATGAGTCCTGAAACTCGTGGTTTGGATGGTGTGGCCTCTGATCATTATGCTTTTAGTAAAGAAATTAGAAACTTTGAAGCAGGTATTCTTTTTCTTTAATATTGTTTTTGTTCTCTTAATTGCATAAAGGTTATTTGGTATAACTTTTCTAAGTCTTTAGTTCGGACAACCACTTAAAATAGCTTATTATAAGTAGTCTTATTTTTTCTAAATCCAAACAGTTTGGATAAAAATAACTTTTTTGAAAAACAATTTGTTGGAATGCTTTGAATCTGTGATCTGGAGCTTTGAAATAACCAAGTATTAGGTTTCACTCTACCTTTGACATAGTTAACGCACTGTTAATGAACCCCGTATGTCTTTGCGTTGATTTTCTATTGCTTTACGTTTTTTCTAGTTTCTTTATTTATCAACTCCATAACACACTTATCCGAGTCTAAGACAACCGCCCAAGAAAACAGTGATTTGAAGGATTTGATTGTAAAATATTGAATATCTTTGATTTGTATTCATGAAGGTTTTAACCAGCGCATGTGTTAAATGAATTTCTTGTTGCTTTTAACCTGATTTTTCCTGGATGACTGAATTCTAAATAACTTTTTTCCTTTTGTTTGGTGGATATACTCTAATGATAGGAACACCTCCAAATGGCTCATCACCCAATCCTACTGTTTCTTTTGGGCAAGGGAAAAAACGTGGTGCTATAGAATATTAGAATCTCGTTTCAAGCATGGTAATCGAATTCTAAACAACTTTTTTCCTTGTGTTTTGTGCAAGTAGAGAAGTGAGATTACACCAAGGGTACTTGTTGATGAATTTTGTTGACTCGCTGTAATTTCTCTAATAGGGGCACCTGGCTGAGTTTCTCAGCTATGGTGATCTACAAGGTAATCTCAAAAAATCTGTTAAAGAGTTGGAGGAGTATGACCCAAAGACCATTGAGCTGTACAGAAATTTAGCCACACATTACTCCAAGCAGTTGTTTGAGATCTATGGAAATGAAGAAGATCCTTTCCTTTTACCTGCATGA

mRNA sequence

ATGGAAGTAGTTGATAATAATGAAATGAAAGAGGAGATTGTTCAGCTTCTGATTGAGAATAATGTTTTGGCTGTTGAGAGGAAGAAGGCTGAAAGTGAGGCTGAGCTGTGGAAAGATTTCAAACAATTGGAGATTCAGATTTCAAAAATGAATGAAAGGAAAGGTGATGGGAAGCCAGTGCTTTGTGGGAAGTTTGAAGGGGGAATTGGATTATCAATGAGTCCTGAAACTCGTGGTTTGGATGGTGTGGCCTCTGATCATTATGCTTTTAGTAAAGAAATTAGAAACTTTGAAGCAGGTAATCTCAAAAAATCTGTTAAAGAGTTGGAGGAGTATGACCCAAAGACCATTGAGCTGTACAGAAATTTAGCCACACATTACTCCAAGCAGTTGTTTGAGATCTATGGAAATGAAGAAGATCCTTTCCTTTTACCTGCATGA

Coding sequence (CDS)

ATGGAAGTAGTTGATAATAATGAAATGAAAGAGGAGATTGTTCAGCTTCTGATTGAGAATAATGTTTTGGCTGTTGAGAGGAAGAAGGCTGAAAGTGAGGCTGAGCTGTGGAAAGATTTCAAACAATTGGAGATTCAGATTTCAAAAATGAATGAAAGGAAAGGTGATGGGAAGCCAGTGCTTTGTGGGAAGTTTGAAGGGGGAATTGGATTATCAATGAGTCCTGAAACTCGTGGTTTGGATGGTGTGGCCTCTGATCATTATGCTTTTAGTAAAGAAATTAGAAACTTTGAAGCAGGTAATCTCAAAAAATCTGTTAAAGAGTTGGAGGAGTATGACCCAAAGACCATTGAGCTGTACAGAAATTTAGCCACACATTACTCCAAGCAGTTGTTTGAGATCTATGGAAATGAAGAAGATCCTTTCCTTTTACCTGCATGA

Protein sequence

MEVVDNNEMKEEIVQLLIENNVLAVERKKAESEAELWKDFKQLEIQISKMNERKGDGKPVLCGKFEGGIGLSMSPETRGLDGVASDHYAFSKEIRNFEAGNLKKSVKELEEYDPKTIELYRNLATHYSKQLFEIYGNEEDPFLLPA*
Homology
BLAST of Chy6G117880 vs. ExPASy TrEMBL
Match: A0A1S3CNR9 (uncharacterized protein LOC103503017 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103503017 PE=4 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 3.9e-33
Identity = 80/101 (79.21%), Postives = 87/101 (86.14%), Query Frame = 0

Query: 1   MEVVDNNEMKEEIVQLLIENNVLAVERKKAESEAELWK-DFKQLEIQISKMNERKGDGKP 60
           + +VDNNE+KEEI QLLIENNVLAVE+K AE+EAELWK  FK LEIQ SKM+ERKGDGKP
Sbjct: 100 VNLVDNNEIKEEIFQLLIENNVLAVEKKNAENEAELWKGKFKHLEIQFSKMDERKGDGKP 159

Query: 61  VLCGKFEGGIGLSMSPETRGLDGVASDHYAFSKEIRNFEAG 101
           VLCGKFEG IGLSMS ET   DGVAS+HYAFSKEI N EAG
Sbjct: 160 VLCGKFEGRIGLSMSHETCASDGVASNHYAFSKEISNIEAG 200

BLAST of Chy6G117880 vs. ExPASy TrEMBL
Match: A0A1S3CNR9 (uncharacterized protein LOC103503017 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103503017 PE=4 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 9.1e-14
Identity = 41/47 (87.23%), Postives = 42/47 (89.36%), Query Frame = 0

Query: 100 GNLKKSVKELEEYDPKTIELYRNLATHYSKQLFEIYGNEEDPFLLPA 147
           GNL KSVKELEEYDPK IEL RNLATHYSKQLFEIYGN+EDPF L A
Sbjct: 568 GNLNKSVKELEEYDPKAIELCRNLATHYSKQLFEIYGNKEDPFFLLA 614


HSP 2 Score: 145.2 bits (365), Expect = 2.2e-31
Identity = 77/96 (80.21%), Postives = 84/96 (87.50%), Query Frame = 0

Query: 1   MEVVDNNEMKEEIVQLLIENNVLAVERKKAESEAELWK-DFKQLEIQISKMNERKGDGKP 60
           + +VDNNE+KEEI QLLIENNVLAVE+K AE+EAELWK  FK LEIQ SKM+ERKGDGKP
Sbjct: 100 VNLVDNNEIKEEIFQLLIENNVLAVEKKNAENEAELWKGKFKHLEIQFSKMDERKGDGKP 159

Query: 61  VLCGKFEGGIGLSMSPETRGLDGVASDHYAFSKEIR 96
           VLCGKFEG IGLSMS ET   DGVAS+HYAFSKEIR
Sbjct: 160 VLCGKFEGRIGLSMSHETCASDGVASNHYAFSKEIR 195

BLAST of Chy6G117880 vs. ExPASy TrEMBL
Match: A0A5A7UA97 (Protein IWS1-like protein A isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold175G00740 PE=4 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 9.1e-14
Identity = 41/47 (87.23%), Postives = 42/47 (89.36%), Query Frame = 0

Query: 100 GNLKKSVKELEEYDPKTIELYRNLATHYSKQLFEIYGNEEDPFLLPA 147
           GNL KSVKELEEYDPK IEL RNLATHYSKQLFEIYGN+EDPF L A
Sbjct: 563 GNLNKSVKELEEYDPKAIELCRNLATHYSKQLFEIYGNKEDPFFLLA 609


HSP 2 Score: 135.6 bits (340), Expect = 1.7e-28
Identity = 71/91 (78.02%), Postives = 79/91 (86.81%), Query Frame = 0

Query: 1   MEVVDNNEMKEEIVQLLIENNVLAVERKKAESEAELWK-DFKQLEIQISKMNERKGDGKP 60
           + +VDNNE+KEEI +LLIENNVLAVE+K AE+EAELWK  FK LEIQ SKM+ERKGDGKP
Sbjct: 100 VNLVDNNEIKEEIFELLIENNVLAVEKKNAENEAELWKGKFKHLEIQFSKMDERKGDGKP 159

Query: 61  VLCGKFEGGIGLSMSPETRGLDGVASDHYAF 91
           VLCGKFEG IGLSMS ET   DGVAS+HYAF
Sbjct: 160 VLCGKFEGRIGLSMSHETCASDGVASNHYAF 190

BLAST of Chy6G117880 vs. ExPASy TrEMBL
Match: A0A5D3BWC5 (Protein IWS1-like protein A isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold11G00170 PE=4 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 9.1e-14
Identity = 41/47 (87.23%), Postives = 42/47 (89.36%), Query Frame = 0

Query: 100 GNLKKSVKELEEYDPKTIELYRNLATHYSKQLFEIYGNEEDPFLLPA 147
           GNL KSVKELEEYDPK IEL RNLATHYSKQLFEIYGN+EDPF L A
Sbjct: 559 GNLNKSVKELEEYDPKAIELCRNLATHYSKQLFEIYGNKEDPFFLLA 605


HSP 2 Score: 114.8 bits (286), Expect = 3.1e-22
Identity = 59/76 (77.63%), Postives = 64/76 (84.21%), Query Frame = 0

Query: 26  ERKKAESEAELWK-DFKQLEIQISKMNERKGDGKPVLCGKFEGGIGLSMSPETRGLDGVA 85
           ++K AE+EAELWK  FK LEIQ SKM+ERKGDGKPVLCGKFEG IGLSMS ET   DGVA
Sbjct: 79  QQKNAENEAELWKGKFKHLEIQFSKMDERKGDGKPVLCGKFEGRIGLSMSHETCASDGVA 138

Query: 86  SDHYAFSKEIRNFEAG 101
           S+HYAFSKEI N EAG
Sbjct: 139 SNHYAFSKEISNIEAG 154

BLAST of Chy6G117880 vs. ExPASy TrEMBL
Match: A0A1S3CNP3 (uncharacterized protein LOC103503017 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103503017 PE=4 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 9.1e-14
Identity = 41/47 (87.23%), Postives = 42/47 (89.36%), Query Frame = 0

Query: 100 GNLKKSVKELEEYDPKTIELYRNLATHYSKQLFEIYGNEEDPFLLPA 147
           GNL KSVKELEEYDPK IEL RNLATHYSKQLFEIYGN+EDPF L A
Sbjct: 522 GNLNKSVKELEEYDPKAIELCRNLATHYSKQLFEIYGNKEDPFFLLA 568


HSP 2 Score: 97.8 bits (242), Expect = 3.9e-17
Identity = 55/103 (53.40%), Postives = 74/103 (71.84%), Query Frame = 0

Query: 1   MEVVDNNEMKEEIVQLLIENNVLAVERKKAESEAELWKD-FKQLEIQISKMNER--KGDG 60
           M ++   + + E+VQLLIENNVLAVE+KKAESEAE+WKD FK+LE +ISK++E     D 
Sbjct: 103 MNLIGKTDEENEVVQLLIENNVLAVEKKKAESEAEMWKDKFKKLETKISKLDESFVLEDD 162

Query: 61  KPVLCGKFEGGIGLSMSPETRGLDGVASDHYAFSKEIRNFEAG 101
            PVL G+ EG  G  +SPE   LD VAS+ ++  K+IR+ +AG
Sbjct: 163 GPVLSGRLEGETGSPLSPEAHVLDCVASNRHSLCKDIRDLQAG 205

BLAST of Chy6G117880 vs. NCBI nr
Match: XP_008465383.1 (PREDICTED: uncharacterized protein LOC103503017 isoform X1 [Cucumis melo] >XP_008465384.1 PREDICTED: uncharacterized protein LOC103503017 isoform X1 [Cucumis melo] >XP_008465385.1 PREDICTED: uncharacterized protein LOC103503017 isoform X1 [Cucumis melo] >XP_008465386.1 PREDICTED: uncharacterized protein LOC103503017 isoform X1 [Cucumis melo])

HSP 1 Score: 149 bits (376), Expect = 6.78e-39
Identity = 80/98 (81.63%), Postives = 85/98 (86.73%), Query Frame = 0

Query: 4   VDNNEMKEEIVQLLIENNVLAVERKKAESEAELWKD-FKQLEIQISKMNERKGDGKPVLC 63
           VDNNE+KEEI QLLIENNVLAVE+K AE+EAELWK  FK LEIQ SKM+ERKGDGKPVLC
Sbjct: 103 VDNNEIKEEIFQLLIENNVLAVEKKNAENEAELWKGKFKHLEIQFSKMDERKGDGKPVLC 162

Query: 64  GKFEGGIGLSMSPETRGLDGVASDHYAFSKEIRNFEAG 100
           GKFEG IGLSMS ET   DGVAS+HYAFSKEI N EAG
Sbjct: 163 GKFEGRIGLSMSHETCASDGVASNHYAFSKEISNIEAG 200

BLAST of Chy6G117880 vs. NCBI nr
Match: XP_038898046.1 (uncharacterized protein LOC120085872 [Benincasa hispida])

HSP 1 Score: 147 bits (372), Expect = 2.11e-38
Identity = 78/98 (79.59%), Postives = 85/98 (86.73%), Query Frame = 0

Query: 4   VDNNEMKEEIVQLLIENNVLAVERKKAESEAELWKD-FKQLEIQISKMNERKGDGKPVLC 63
           VD NEM +E+VQLLIENNVLAVE+KKAESEAELWKD FKQLEIQISKM+ERKGD +PVL 
Sbjct: 87  VDKNEMDDEVVQLLIENNVLAVEKKKAESEAELWKDKFKQLEIQISKMDERKGDNEPVLS 146

Query: 64  GKFEGGIGLSMSPETRGLDGVASDHYAFSKEIRNFEAG 100
           GKFEGGIGLS+SPE R  DGVA +HY  SKEI N EAG
Sbjct: 147 GKFEGGIGLSLSPEARASDGVAFNHYDLSKEISNLEAG 184

BLAST of Chy6G117880 vs. NCBI nr
Match: KAA0050461.1 (protein IWS1-like protein A isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 144 bits (362), Expect = 6.15e-37
Identity = 77/93 (82.80%), Postives = 82/93 (88.17%), Query Frame = 0

Query: 4   VDNNEMKEEIVQLLIENNVLAVERKKAESEAELWKD-FKQLEIQISKMNERKGDGKPVLC 63
           VDNNE+KEEI QLLIENNVLAVE+K AE+EAELWK  FK LEIQ SKM+ERKGDGKPVLC
Sbjct: 103 VDNNEIKEEIFQLLIENNVLAVEKKNAENEAELWKGKFKHLEIQFSKMDERKGDGKPVLC 162

Query: 64  GKFEGGIGLSMSPETRGLDGVASDHYAFSKEIR 95
           GKFEG IGLSMS ET   DGVAS+HYAFSKEIR
Sbjct: 163 GKFEGRIGLSMSHETCASDGVASNHYAFSKEIR 195

BLAST of Chy6G117880 vs. NCBI nr
Match: TYK03142.1 (protein IWS1-like protein A isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 134 bits (336), Expect = 2.64e-33
Identity = 71/88 (80.68%), Postives = 77/88 (87.50%), Query Frame = 0

Query: 4   VDNNEMKEEIVQLLIENNVLAVERKKAESEAELWKD-FKQLEIQISKMNERKGDGKPVLC 63
           VDNNE+KEEI +LLIENNVLAVE+K AE+EAELWK  FK LEIQ SKM+ERKGDGKPVLC
Sbjct: 103 VDNNEIKEEIFELLIENNVLAVEKKNAENEAELWKGKFKHLEIQFSKMDERKGDGKPVLC 162

Query: 64  GKFEGGIGLSMSPETRGLDGVASDHYAF 90
           GKFEG IGLSMS ET   DGVAS+HYAF
Sbjct: 163 GKFEGRIGLSMSHETCASDGVASNHYAF 190

BLAST of Chy6G117880 vs. NCBI nr
Match: XP_008465387.1 (PREDICTED: uncharacterized protein LOC103503017 isoform X2 [Cucumis melo])

HSP 1 Score: 113 bits (282), Expect = 6.73e-26
Identity = 59/76 (77.63%), Postives = 64/76 (84.21%), Query Frame = 0

Query: 26  ERKKAESEAELWKD-FKQLEIQISKMNERKGDGKPVLCGKFEGGIGLSMSPETRGLDGVA 85
           ++K AE+EAELWK  FK LEIQ SKM+ERKGDGKPVLCGKFEG IGLSMS ET   DGVA
Sbjct: 79  QQKNAENEAELWKGKFKHLEIQFSKMDERKGDGKPVLCGKFEGRIGLSMSHETCASDGVA 138

Query: 86  SDHYAFSKEIRNFEAG 100
           S+HYAFSKEI N EAG
Sbjct: 139 SNHYAFSKEISNIEAG 154

BLAST of Chy6G117880 vs. TAIR 10
Match: AT5G53220.1 (unknown protein; Has 3099 Blast hits to 2528 proteins in 332 species: Archae - 2; Bacteria - 245; Metazoa - 1059; Fungi - 555; Plants - 177; Viruses - 49; Other Eukaryotes - 1012 (source: NCBI BLink). )

HSP 1 Score: 56.2 bits (134), Expect = 2.5e-08
Identity = 26/44 (59.09%), Postives = 33/44 (75.00%), Query Frame = 0

Query: 99  AGNLKKSVKELEEYDPKTIELYRNLATHYSKQLFEIYGNEEDPF 143
           AG++KKSV+EL+ +D K +E    LA  YSKQLF+IY N EDPF
Sbjct: 318 AGDMKKSVEELKVFDFKGVEKCEELARKYSKQLFQIYNNREDPF 361

BLAST of Chy6G117880 vs. TAIR 10
Match: AT5G53220.2 (unknown protein; Has 3081 Blast hits to 2526 proteins in 331 species: Archae - 2; Bacteria - 227; Metazoa - 1059; Fungi - 555; Plants - 177; Viruses - 49; Other Eukaryotes - 1012 (source: NCBI BLink). )

HSP 1 Score: 56.2 bits (134), Expect = 2.5e-08
Identity = 26/44 (59.09%), Postives = 33/44 (75.00%), Query Frame = 0

Query: 99  AGNLKKSVKELEEYDPKTIELYRNLATHYSKQLFEIYGNEEDPF 143
           AG++KKSV+EL+ +D K +E    LA  YSKQLF+IY N EDPF
Sbjct: 318 AGDMKKSVEELKVFDFKGVEKCEELARKYSKQLFQIYNNREDPF 361

BLAST of Chy6G117880 vs. TAIR 10
Match: AT5G53220.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 56.2 bits (134), Expect = 2.5e-08
Identity = 26/44 (59.09%), Postives = 33/44 (75.00%), Query Frame = 0

Query: 99  AGNLKKSVKELEEYDPKTIELYRNLATHYSKQLFEIYGNEEDPF 143
           AG++KKSV+EL+ +D K +E    LA  YSKQLF+IY N EDPF
Sbjct: 318 AGDMKKSVEELKVFDFKGVEKCEELARKYSKQLFQIYNNREDPF 361

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A1S3CNR93.9e-3379.21uncharacterized protein LOC103503017 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10... [more]
A0A1S3CNR99.1e-1487.23uncharacterized protein LOC103503017 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10... [more]
A0A5A7UA979.1e-1487.23Protein IWS1-like protein A isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN... [more]
A0A5D3BWC59.1e-1487.23Protein IWS1-like protein A isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN... [more]
A0A1S3CNP39.1e-1487.23uncharacterized protein LOC103503017 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10... [more]
Match NameE-valueIdentityDescription
XP_008465383.16.78e-3981.63PREDICTED: uncharacterized protein LOC103503017 isoform X1 [Cucumis melo] >XP_00... [more]
XP_038898046.12.11e-3879.59uncharacterized protein LOC120085872 [Benincasa hispida][more]
KAA0050461.16.15e-3782.80protein IWS1-like protein A isoform X1 [Cucumis melo var. makuwa][more]
TYK03142.12.64e-3380.68protein IWS1-like protein A isoform X1 [Cucumis melo var. makuwa][more]
XP_008465387.16.73e-2677.63PREDICTED: uncharacterized protein LOC103503017 isoform X2 [Cucumis melo][more]
Match NameE-valueIdentityDescription
AT5G53220.12.5e-0859.09unknown protein; Has 3099 Blast hits to 2528 proteins in 332 species: Archae - 2... [more]
AT5G53220.22.5e-0859.09unknown protein; Has 3081 Blast hits to 2526 proteins in 331 species: Archae - 2... [more]
AT5G53220.32.5e-0859.09unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 6..26
NoneNo IPR availablePANTHERPTHR34380:SF1BNAA03G12380D PROTEINcoord: 7..55
NoneNo IPR availablePANTHERPTHR34380BNAA03G12380D PROTEINcoord: 7..55
NoneNo IPR availablePANTHERPTHR34380BNAA03G12380D PROTEINcoord: 99..145
NoneNo IPR availablePANTHERPTHR34380:SF1BNAA03G12380D PROTEINcoord: 99..145

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Chy6G117880.1Chy6G117880.1mRNA