Chy6G117390 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAATGGATAATGGAGTTTCCCCCAAAAGTTAGGGTAATTGAGCTTGTGGGCATGGCTAGAAGTTTTCTTAGATCTAGGTTTCAGTCCTTACCGGGTGCATTCAACACATACTTGGTGCCATCAGATAACTCTAAGAAAAGGGGATTCTCCTTCTCAAAGTGCTTTGCTGAGGTTGCTCTTTTATTTTTGAATTTTAATTATCGTTCTCTAAGATGTATAAAATAAGTGGTTCAAGCATTATATCTGTAGTAATTTCTTTTTATTTCTGAGTAGATTACCACCAGTAGGAGAAGTGAAGCTGCCAAGTTTGCACAGTTGTGGAATGAAGTGATATGTAGTTTTCGAGAGGAAGATCTAATAAGTGACAGGAAAGGCTGTATAAACTAAGTTATATTTTGTTTCTTCATTCCAAGCATCCTTCAGTCAATAACTAAGTTATATTTTCTCAAGTACAAGTGTTGAAATCTTAGAAAAATTCCATGTATTCTAAAAAATTACTTTTATTTATACGGATTTAGTTTTTGAAAAGTAGTTACAAAGCAATAGAGGTGATACAAGTGTTTATAGATTTAATTAATTATTAAAAACAAAAAACAAAAAACCAAATAGTTATTGACTGAAATAATTTCAAAAGAGTACAACATGTAAGTTAAAGACTTTTCTGTGTAAATATTTCTTCTAAAAGTACTTCAAATTGTTGTTTTATTTTTAGGCTGTGCAGATGAGTACATGAAATGTGAGTGATAGAGTGGTATGAATCTTTCAAAAATGTCCTGAATGTTCTGGTGGTTGGAGAAAATGAGAAAAGGTTCCAAGCTATTGAACCAAACATCATCAAATAATCATAGTTTCCTTTCCTTCCCATAGAAAACATGAAAAATCTTAACCTTTTGTTCTTTACCATTTGTAAAACCAAGAACCTATGTCAAGTGTTTTCATGAATTCTTATTCCACTTTGAATTTTACAAGATTATTGGGACCATTATTAAAGAAGTTGAAAATAATATTGGGAAGTACACTTCTTACAAAATTCAAAATGGATCCATTACTCATTTTGTGCAAGAAATTTGTGGAACTCGTGGAGATCTTGGTAAGTTATGATGCAATTCTGAAGAATTTATGATCTATTACTTCAGAATGAAAACTTTGCTCTTGTTTTCTGTTTCAGAAAGATGGAGACCCATCCAAGCAAGATATAGTGGTGCTTTTGCTGCAAGATATGTTAGAAGTTGTCACTCGAGATATGATGCTCAATGAAGTCCGACAATTTGTGCAATTTGAAGTAAATTTATTTATGTCCACTAGCATCTTCCAATGGTTACTGTTATGTGCTAAAATGATAACTTGTTATATCTTTCAGTGAATTGGCAGAACTGAGTCATAACAGGACTCAGGAAGGCAACTCTTTGCTGGTACTGACACTAGACCTGCCATAAACTTTCCTTCTTCAGTTACTGCTCAATGGGAAGAGCAGGTGGGTATATTGAAAAAGAAAATAATAGTACTTTCAAGAAATTATCTATCATTCTAAGATTTCAACTGATTAATTGAAATAATACAATTTTGTTTTTGTGGGTGTTGTCAGATTAGACGTCTCTATCTACTATTGACGGTGAAAAAATTTGCTACTGATGTTCCTATAAATCTTGAAGCACGGCAAAGAATTGCATTTTTCACAAATTCATTATTTAGGGATATGCCTTGTGTCCCACGAGTCCATAAGATGTTATCATTCAGGTCTAGTTTTTTTTTACTCTATTTGAAATTTCATCCAAATTTGAGTTTGGATGCATCACCCTTTCTCTCGAGATGAATATTTTTGGGTTGTTCACAGTTTTATGACCCCATACTATAGTGAGGAGACTGTATATTCTAAAACTGATCTTGAGATGGAAAATGAGGATGGTGTCTCCATCATATATTATTTGCAGATAATCTATCCAAGTGAGTGATATATGGAAACAACACAAAATATCTCTTGGTTCTTTGATAGGTGATTTCTAAGTGACTTTCTCATGAACATTTTCCTTCTTGCTAGATGAATGGAACAACTTCATGGAGCGACTCAATTGTAAAAAAGACAGTGAGATATGGGAAAATGAAGAAAACATATTACACCTTCGTCATTGGGCGTCCTTACGAGGACAAACTCTATCAAGAACAA ATGAAATGGATAATGGAGTTTCCCCCAAAAGTTAGGGTAATTGAGCTTGTGGGCATGGCTAGAAGTTTTCTTAGATCTAGGTTTCAGTCCTTACCGGGTGCATTCAACACATACTTGGTGCCATCAGATAACTCTAAGAAAAGGGGATTCTCCTTCTCAAAGTGCTTTGCTGAGAAAGATGGAGACCCATCCAAGCAAGATATAGTGGTGCTTTTGCTGCAAGATATGTTAGAAGTTGTCACTCGAGATATGATGCTCAATGAAGTCCGACAATTTGTGCAATTTGAAGACTCAGGAAGGCAACTCTTTGCTGGTACTGACACTAGACCTGCCATAAACTTTCCTTCTTCAGTTACTGCTCAATGGGAAGAGCAGATGAATGGAACAACTTCATGGAGCGACTCAATTGTAAAAAAGACAGTGAGATATGGGAAAATGAAGAAAACATATTACACCTTCGTCATTGGGCGTCCTTACGAGGACAAACTCTATCAAGAACAA ATGAAATGGATAATGGAGTTTCCCCCAAAAGTTAGGGTAATTGAGCTTGTGGGCATGGCTAGAAGTTTTCTTAGATCTAGGTTTCAGTCCTTACCGGGTGCATTCAACACATACTTGGTGCCATCAGATAACTCTAAGAAAAGGGGATTCTCCTTCTCAAAGTGCTTTGCTGAGAAAGATGGAGACCCATCCAAGCAAGATATAGTGGTGCTTTTGCTGCAAGATATGTTAGAAGTTGTCACTCGAGATATGATGCTCAATGAAGTCCGACAATTTGTGCAATTTGAAGACTCAGGAAGGCAACTCTTTGCTGGTACTGACACTAGACCTGCCATAAACTTTCCTTCTTCAGTTACTGCTCAATGGGAAGAGCAGATGAATGGAACAACTTCATGGAGCGACTCAATTGTAAAAAAGACAGTGAGATATGGGAAAATGAAGAAAACATATTACACCTTCGTCATTGGGCGTCCTTACGAGGACAAACTCTATCAAGAACAA MKWIMEFPPKVRVIELVGMARSFLRSRFQSLPGAFNTYLVPSDNSKKRGFSFSKCFAEKDGDPSKQDIVVLLLQDMLEVVTRDMMLNEVRQFVQFEDSGRQLFAGTDTRPAINFPSSVTAQWEEQMNGTTSWSDSIVKKTVRYGKMKKTYYTFVIGRPYEDKLYQEQ Homology
BLAST of Chy6G117390 vs. ExPASy Swiss-Prot
Match: Q3B724 (Callose synthase 5 OS=Arabidopsis thaliana OX=3702 GN=CALS5 PE=1 SV=1) HSP 1 Score: 91.7 bits (226), Expect = 8.7e-18 Identity = 47/73 (64.38%), Postives = 57/73 (78.08%), Query Frame = 0
HSP 2 Score: 62.8 bits (151), Expect = 4.3e-09 Identity = 29/35 (82.86%), Postives = 32/35 (91.43%), Query Frame = 0
BLAST of Chy6G117390 vs. ExPASy Swiss-Prot
Match: Q9LTG5 (Callose synthase 4 OS=Arabidopsis thaliana OX=3702 GN=CALS4 PE=3 SV=2) HSP 1 Score: 45.8 bits (107), Expect = 5.5e-04 Identity = 26/58 (44.83%), Postives = 37/58 (63.79%), Query Frame = 0
BLAST of Chy6G117390 vs. ExPASy TrEMBL
Match: A0A4S8IXN9 (1,3-beta-glucan synthase OS=Musa balbisiana OX=52838 GN=C4D60_Mb10t06700 PE=3 SV=1) HSP 1 Score: 132.5 bits (332), Expect = 1.6e-27 Identity = 87/224 (38.84%), Postives = 110/224 (49.11%), Query Frame = 0
BLAST of Chy6G117390 vs. ExPASy TrEMBL
Match: A0A2C9UWZ4 (1,3-beta-glucan synthase OS=Manihot esculenta OX=3983 GN=MANES_12G155300 PE=3 SV=1) HSP 1 Score: 118.2 bits (295), Expect = 3.2e-23 Identity = 81/202 (40.10%), Postives = 92/202 (45.54%), Query Frame = 0
BLAST of Chy6G117390 vs. ExPASy TrEMBL
Match: B9SUQ8 (1,3-beta-glucan synthase OS=Ricinus communis OX=3988 GN=RCOM_0627050 PE=3 SV=1) HSP 1 Score: 117.5 bits (293), Expect = 5.5e-23 Identity = 82/202 (40.59%), Postives = 91/202 (45.05%), Query Frame = 0
BLAST of Chy6G117390 vs. ExPASy TrEMBL
Match: A0A0A0LM93 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G302250 PE=4 SV=1) HSP 1 Score: 116.3 bits (290), Expect = 1.2e-22 Identity = 59/71 (83.10%), Postives = 64/71 (90.14%), Query Frame = 0
BLAST of Chy6G117390 vs. ExPASy TrEMBL
Match: A0A6A1VCI7 (1,3-beta-glucan synthase OS=Morella rubra OX=262757 GN=CJ030_MR6G010868 PE=3 SV=1) HSP 1 Score: 114.0 bits (284), Expect = 6.0e-22 Identity = 82/220 (37.27%), Postives = 92/220 (41.82%), Query Frame = 0
BLAST of Chy6G117390 vs. NCBI nr
Match: THU52702.1 (hypothetical protein C4D60_Mb10t06700 [Musa balbisiana]) HSP 1 Score: 134 bits (337), Expect = 7.61e-33 Identity = 90/234 (38.46%), Postives = 114/234 (48.72%), Query Frame = 0
BLAST of Chy6G117390 vs. NCBI nr
Match: KGN62227.2 (hypothetical protein Csa_006766 [Cucumis sativus]) HSP 1 Score: 123 bits (309), Expect = 4.65e-29 Identity = 93/246 (37.80%), Postives = 100/246 (40.65%), Query Frame = 0
BLAST of Chy6G117390 vs. NCBI nr
Match: EEF32656.1 (transferase, transferring glycosyl groups, putative [Ricinus communis]) HSP 1 Score: 118 bits (296), Expect = 2.59e-27 Identity = 85/217 (39.17%), Postives = 97/217 (44.70%), Query Frame = 0
BLAST of Chy6G117390 vs. NCBI nr
Match: XP_038901615.1 (LOW QUALITY PROTEIN: callose synthase 5 [Benincasa hispida]) HSP 1 Score: 115 bits (289), Expect = 2.27e-26 Identity = 59/71 (83.10%), Postives = 63/71 (88.73%), Query Frame = 0
BLAST of Chy6G117390 vs. NCBI nr
Match: XP_031736648.1 (callose synthase 5-like [Cucumis sativus]) HSP 1 Score: 115 bits (288), Expect = 3.09e-26 Identity = 58/71 (81.69%), Postives = 64/71 (90.14%), Query Frame = 0
BLAST of Chy6G117390 vs. TAIR 10
Match: AT2G13680.1 (callose synthase 5 ) HSP 1 Score: 91.7 bits (226), Expect = 6.2e-19 Identity = 47/73 (64.38%), Postives = 57/73 (78.08%), Query Frame = 0
HSP 2 Score: 62.8 bits (151), Expect = 3.1e-10 Identity = 29/35 (82.86%), Postives = 32/35 (91.43%), Query Frame = 0
BLAST of Chy6G117390 vs. TAIR 10
Match: AT5G36870.1 (glucan synthase-like 9 ) HSP 1 Score: 45.8 bits (107), Expect = 3.9e-05 Identity = 26/58 (44.83%), Postives = 37/58 (63.79%), Query Frame = 0
BLAST of Chy6G117390 vs. TAIR 10
Match: AT1G05570.1 (callose synthase 1 ) HSP 1 Score: 43.5 bits (101), Expect = 1.9e-04 Identity = 28/49 (57.14%), Postives = 33/49 (67.35%), Query Frame = 0
BLAST of Chy6G117390 vs. TAIR 10
Match: AT1G05570.2 (callose synthase 1 ) HSP 1 Score: 43.5 bits (101), Expect = 1.9e-04 Identity = 28/49 (57.14%), Postives = 33/49 (67.35%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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