Chy6G117090 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCGCTTTATCAATTCCCCTCTCTCACAATGGTTTCTCTCGCAGCTTCTTCTCTACAAGCCGTTCACAAATTGTATACCCTTTTCCCCATTCGCTCCCCCGTATCACCTGCTCTGGTTAGTCTTTTCTCTATCTCTTCTATCTATATTTTTAGGCATTGATTTACTCCAATAATTGCTACATTCTGTACCGGCCTTTTGTGGGTAAATTGCGTTGGCTTCCTGCCCTTTGATTGCCTATTACATCTTGTTAAGCTTAGGATCAAGATCCTGGTTTGCCAAATTGGTTAGTTCTTTGAATGAGTTCAAATTTGTAACAAAAAAATTTATGTGTTTGCATACCCTGAAATGTGCTTAGTCTAATACAATTAGATGGTGTTTGGTGCACTGAGTTGAGTTTTAAAGCATGAAATTAATATGTTGAAATTAGTAAATCTATTTTAGAGGGGCATTGTTGTTTAGTTAGGAGATAGTAAACATTAGAAAGAGGGAGAGAGACAAAGAAGAAGATGAAGTTCATTATAAATGTGTAAATTACAATAGTGAATGTTGTTGAAGTTGATAAAGTTGAGTTATTTAACACCAATTTATGAAGTTGATGGACTAAACACTTCCGTAGAATTCTTCACCAAGTAGAGGAAAACAAATATTATGTGAATTGGACATTAAGTTGGTGTAAACAACTCAATTTCAATAGTAAACACAATTGAAGTTTACACATTTATTGAGTAAATTCTTCTATCCTATATTTTTACTTTTCACATTTATCGAGTAATTTCATTTTCTCTTAATCTACTTTTCACAATTATCAAGCAATTCCATCTTAGAACTCTATTACCTCCATCTAACAACACAAACTTACTCATTCCACTCAATTGGTCCAACACCCCCAACTCCACTCAATTGGCCAAACACCCTCTTAACTGAACTTGCATCGAAGTATTATGAGTTAGATTTTAATGGAGTTTTATCTGCCATGCCATTGTCGCTGCACTTACAGCTACCAGGGATGGGGCAGAACCAAGAGAGAATTTGTCACCCTGCAAGCATATTAGTACTGTAGCTTGTGGACTTCTTGCTGTTTGGGCTTTGACAAATACCTCTCCTGTCATTGCAGCTAATCAGGTTAATAGCATTTCTATTCATTTATAGTTTATACTTTAATTTTGTATTGAATAGTTTGTACCCTAGATAAATTTTCAACTATTTGGAATATATGGATATAATCAACTTTGCTGCAGTAATCCATCAACTCAAGTCCATGACAATTTACTGTAATATATTGATTATATTTAATTTTTTGCATTATTTTCTGTGATTTGAGGTTTGTAGTGATTTAACAGTTGACACGACTTTTAGAATAATGAAATGCTATTCAAATTTATCATGATATTTGGGTATGAACTGAAAATTCGCAAGCGCTATTCCGAACCTACAATGTTGCATTTAAATTTAGGCTTAAGATGCAAGACCTAGTTATTTTTTTAGGGGGTTGAGTGTGTTGGTTTGGAAACCCTACTTTTCCAGCTCATCATTCTGAGCCCACATCCCTTTCTGGATGTTCTACGATACCATGATTATAAGGCTCTTTCTGATAGGATAACTTGTCAGTTTTCCTGATTCTAACTAAAATTCAGTTATCTACTTCACCAGTTGAAATACAGGTCATGTTACTCGATTTTCTTCTATTCATGTTATGTTTTTCTTTTTATAGTGATGATTGACTAATGTTATTCACTTTCTGTCGCAAGCGTCAAATTGTTCGACGTTTTACTTTGGGAAAGAAACCTGTTGATCTTATAATGTCTGGGACTTGCAGAGGCTGCCTCCACTGTCTACAGAACCCGACCGATGTGAGCGTGCTTTTGTTGGCAATACCATAGGTCAAGCAAATGGTGTCTATGATAAGCCAATTGATCTTCGTTTCTGTGACTACACAAATGAAAAAAACCAGTTAAAAGGGAAATCTCTTGCTGCTGCATTGATGTCAGATGCAAAGTTTGATGGTGCAGATCTCTCTGAAGTGGTAATGTCAAAAGCTTATGCTGTTGGAGCCAGCTTCAAGGGTAAAACTCTCTCTATCATACCCCCACTCCAATAAGGAAGTGGGTTGTTAACAAATCATTCATATTAGTGGTGATTTTATTAAATTTTGAAATCACTTTGAAACATATTTTTACTTACTCAAATTATATTCAACATTTAATTATATACTTTTGGAAACATTTTTCGTACTATTAAAATTTATTTTGAATGATTTAAAAACATTTTAGAGTGTTCTTTGAGCGATTTTAACCATTTTGAAAATTACTCCTAAACATGTCATTAGTTTCTAGACTTTGCTCTCAATACTTGATAATGGTACATAGACAAAATCCACATGCTCAACATATGCTAGTTTATAGAATAAATCCCAGGCTCCAAAACTATTTAGGAACGTGGATGATCTCATTTTAATTTTTAACTGGGATGAAACATCAAAAGATGTTTCATACTCGGCTCCCTTCTTGTGCTTCAAGTAAATTTGATGGGAAGCCAAAAATGCATTCAAGTAGACTATTAAGAAGTGTCATATCTGTTGACCTATTAAGCTGCATGTTAATCCCATAATTGATCCTAAGCTGGTCATGAGTTTGCTAAAATTTTTGGCCGATTTGCCATTTGGTTTTTAGCTTTCGGAAATTGAGCCTATGAACACTCATGGCACTCTAAAAAAGATACATATCATTGTAAGAAAACAAGTACATGTTTTCTGTCTTTAAGGACGACTCCAAATAATCTTGAAAAAAAAACTCACAATATGGGTTAAAATATCATGACAACGTTGCATATTGCAGGTGTTGATTTCTCAAATGCAGTTCTAGACAGGGTAAATTTTGGGAAAGCCAATCTCCAAGGAGCTTTGTTCAAAAACACTGTGCTTTCAGGGTCAACATTTGATGACGCTCAATTGGAAGATGCAGTTTTTGAGGACACAATCATAGGCTACATTGATCTGCAGAAACTTTGTGTAAATCCAACTATTAGTCCTGAAGGAAGAGCTGAATTGGGATGTCGATGA ATGGCCGCTTTATCAATTCCCCTCTCTCACAATGGTTTCTCTCGCAGCTTCTTCTCTACAAGCCGTTCACAAATTGTATACCCTTTTCCCCATTCGCTCCCCCGTATCACCTGCTCTGCTACCAGGGATGGGGCAGAACCAAGAGAGAATTTGTCACCCTGCAAGCATATTAGTACTGTAGCTTGTGGACTTCTTGCTGTTTGGGCTTTGACAAATACCTCTCCTGTCATTGCAGCTAATCAGAGGCTGCCTCCACTGTCTACAGAACCCGACCGATGTGAGCGTGCTTTTGTTGGCAATACCATAGGTCAAGCAAATGGTGTCTATGATAAGCCAATTGATCTTCGTTTCTGTGACTACACAAATGAAAAAAACCAGTTAAAAGGGAAATCTCTTGCTGCTGCATTGATGTCAGATGCAAAGTTTGATGGTGCAGATCTCTCTGAAGTGGTAATGTCAAAAGCTTATGCTGTTGGAGCCAGCTTCAAGGGTGTTGATTTCTCAAATGCAGTTCTAGACAGGGTAAATTTTGGGAAAGCCAATCTCCAAGGAGCTTTGTTCAAAAACACTGTGCTTTCAGGGTCAACATTTGATGACGCTCAATTGGAAGATGCAGTTTTTGAGGACACAATCATAGGCTACATTGATCTGCAGAAACTTTGTGTAAATCCAACTATTAGTCCTGAAGGAAGAGCTGAATTGGGATGTCGATGA ATGGCCGCTTTATCAATTCCCCTCTCTCACAATGGTTTCTCTCGCAGCTTCTTCTCTACAAGCCGTTCACAAATTGTATACCCTTTTCCCCATTCGCTCCCCCGTATCACCTGCTCTGCTACCAGGGATGGGGCAGAACCAAGAGAGAATTTGTCACCCTGCAAGCATATTAGTACTGTAGCTTGTGGACTTCTTGCTGTTTGGGCTTTGACAAATACCTCTCCTGTCATTGCAGCTAATCAGAGGCTGCCTCCACTGTCTACAGAACCCGACCGATGTGAGCGTGCTTTTGTTGGCAATACCATAGGTCAAGCAAATGGTGTCTATGATAAGCCAATTGATCTTCGTTTCTGTGACTACACAAATGAAAAAAACCAGTTAAAAGGGAAATCTCTTGCTGCTGCATTGATGTCAGATGCAAAGTTTGATGGTGCAGATCTCTCTGAAGTGGTAATGTCAAAAGCTTATGCTGTTGGAGCCAGCTTCAAGGGTGTTGATTTCTCAAATGCAGTTCTAGACAGGGTAAATTTTGGGAAAGCCAATCTCCAAGGAGCTTTGTTCAAAAACACTGTGCTTTCAGGGTCAACATTTGATGACGCTCAATTGGAAGATGCAGTTTTTGAGGACACAATCATAGGCTACATTGATCTGCAGAAACTTTGTGTAAATCCAACTATTAGTCCTGAAGGAAGAGCTGAATTGGGATGTCGATGA MAALSIPLSHNGFSRSFFSTSRSQIVYPFPHSLPRITCSATRDGAEPRENLSPCKHISTVACGLLAVWALTNTSPVIAANQRLPPLSTEPDRCERAFVGNTIGQANGVYDKPIDLRFCDYTNEKNQLKGKSLAAALMSDAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKANLQGALFKNTVLSGSTFDDAQLEDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR* Homology
BLAST of Chy6G117090 vs. ExPASy Swiss-Prot
Match: P81760 (Thylakoid lumenal 17.4 kDa protein, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TL17 PE=1 SV=2) HSP 1 Score: 306.6 bits (784), Expect = 2.4e-82 Identity = 155/240 (64.58%), Postives = 188/240 (78.33%), Query Frame = 0
BLAST of Chy6G117090 vs. ExPASy Swiss-Prot
Match: Q8H1Q1 (Thylakoid lumenal protein TL20.3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TL20.3 PE=1 SV=1) HSP 1 Score: 72.8 bits (177), Expect = 5.9e-12 Identity = 69/242 (28.51%), Postives = 109/242 (45.04%), Query Frame = 0
BLAST of Chy6G117090 vs. ExPASy Swiss-Prot
Match: B1WVN5 (Pentapeptide repeat protein Rfr32 OS=Crocosphaera subtropica (strain ATCC 51142 / BH68) OX=43989 GN=rfr32 PE=1 SV=1) HSP 1 Score: 58.5 bits (140), Expect = 1.2e-07 Identity = 36/119 (30.25%), Postives = 57/119 (47.90%), Query Frame = 0
BLAST of Chy6G117090 vs. ExPASy Swiss-Prot
Match: P81778 (Thylakoid lumenal 17.4 kDa protein (Fragment) OS=Spinacia oleracea OX=3562 PE=1 SV=2) HSP 1 Score: 50.1 bits (118), Expect = 4.1e-05 Identity = 21/23 (91.30%), Postives = 22/23 (95.65%), Query Frame = 0
BLAST of Chy6G117090 vs. ExPASy Swiss-Prot
Match: P74221 (Uncharacterized protein slr1152 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=slr1152 PE=4 SV=1) HSP 1 Score: 48.5 bits (114), Expect = 1.2e-04 Identity = 31/98 (31.63%), Postives = 50/98 (51.02%), Query Frame = 0
BLAST of Chy6G117090 vs. ExPASy TrEMBL
Match: A0A0A0LC74 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G238170 PE=4 SV=1) HSP 1 Score: 472.6 bits (1215), Expect = 9.5e-130 Identity = 234/237 (98.73%), Postives = 235/237 (99.16%), Query Frame = 0
BLAST of Chy6G117090 vs. ExPASy TrEMBL
Match: A0A1S3C2V7 (thylakoid lumenal 17.4 kDa protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103496052 PE=4 SV=1) HSP 1 Score: 462.6 bits (1189), Expect = 9.9e-127 Identity = 229/237 (96.62%), Postives = 232/237 (97.89%), Query Frame = 0
BLAST of Chy6G117090 vs. ExPASy TrEMBL
Match: A0A6J1JAQ7 (thylakoid lumenal 17.4 kDa protein, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111482783 PE=4 SV=1) HSP 1 Score: 430.3 bits (1105), Expect = 5.4e-117 Identity = 212/237 (89.45%), Postives = 220/237 (92.83%), Query Frame = 0
BLAST of Chy6G117090 vs. ExPASy TrEMBL
Match: A0A6J1CH87 (thylakoid lumenal 17.4 kDa protein, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111011411 PE=4 SV=1) HSP 1 Score: 424.9 bits (1091), Expect = 2.3e-115 Identity = 208/237 (87.76%), Postives = 219/237 (92.41%), Query Frame = 0
BLAST of Chy6G117090 vs. ExPASy TrEMBL
Match: A0A6J1G0I9 (thylakoid lumenal 17.4 kDa protein, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111449567 PE=4 SV=1) HSP 1 Score: 424.5 bits (1090), Expect = 3.0e-115 Identity = 210/237 (88.61%), Postives = 221/237 (93.25%), Query Frame = 0
BLAST of Chy6G117090 vs. NCBI nr
Match: XP_011651313.1 (thylakoid lumenal 17.4 kDa protein, chloroplastic [Cucumis sativus] >KGN57651.1 hypothetical protein Csa_010496 [Cucumis sativus]) HSP 1 Score: 473 bits (1218), Expect = 2.47e-168 Identity = 234/237 (98.73%), Postives = 235/237 (99.16%), Query Frame = 0
BLAST of Chy6G117090 vs. NCBI nr
Match: XP_008455988.1 (PREDICTED: thylakoid lumenal 17.4 kDa protein, chloroplastic [Cucumis melo]) HSP 1 Score: 463 bits (1192), Expect = 2.28e-164 Identity = 229/237 (96.62%), Postives = 232/237 (97.89%), Query Frame = 0
BLAST of Chy6G117090 vs. NCBI nr
Match: XP_038885483.1 (thylakoid lumenal 17.4 kDa protein, chloroplastic [Benincasa hispida]) HSP 1 Score: 447 bits (1151), Expect = 4.06e-158 Identity = 220/237 (92.83%), Postives = 227/237 (95.78%), Query Frame = 0
BLAST of Chy6G117090 vs. NCBI nr
Match: XP_022984509.1 (thylakoid lumenal 17.4 kDa protein, chloroplastic-like [Cucurbita maxima]) HSP 1 Score: 431 bits (1108), Expect = 6.13e-151 Identity = 212/237 (89.45%), Postives = 220/237 (92.83%), Query Frame = 0
BLAST of Chy6G117090 vs. NCBI nr
Match: XP_023541447.1 (thylakoid lumenal 17.4 kDa protein, chloroplastic-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 429 bits (1102), Expect = 1.19e-150 Identity = 212/237 (89.45%), Postives = 222/237 (93.67%), Query Frame = 0
BLAST of Chy6G117090 vs. TAIR 10
Match: AT5G53490.1 (Tetratricopeptide repeat (TPR)-like superfamily protein ) HSP 1 Score: 306.6 bits (784), Expect = 1.7e-83 Identity = 155/240 (64.58%), Postives = 188/240 (78.33%), Query Frame = 0
BLAST of Chy6G117090 vs. TAIR 10
Match: AT5G53490.2 (Tetratricopeptide repeat (TPR)-like superfamily protein ) HSP 1 Score: 305.4 bits (781), Expect = 3.9e-83 Identity = 154/239 (64.44%), Postives = 187/239 (78.24%), Query Frame = 0
BLAST of Chy6G117090 vs. TAIR 10
Match: AT5G53490.3 (Tetratricopeptide repeat (TPR)-like superfamily protein ) HSP 1 Score: 301.2 bits (770), Expect = 7.3e-82 Identity = 155/254 (61.02%), Postives = 188/254 (74.02%), Query Frame = 0
BLAST of Chy6G117090 vs. TAIR 10
Match: AT1G12250.1 (Pentapeptide repeat-containing protein ) HSP 1 Score: 72.8 bits (177), Expect = 4.2e-13 Identity = 69/242 (28.51%), Postives = 109/242 (45.04%), Query Frame = 0
BLAST of Chy6G117090 vs. TAIR 10
Match: AT1G12250.2 (Pentapeptide repeat-containing protein ) HSP 1 Score: 68.9 bits (167), Expect = 6.1e-12 Identity = 49/166 (29.52%), Postives = 80/166 (48.19%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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