Chy6G116890 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCTTTGGTTCTCTTCTCTGCTATCCCAATGCTCATCCACATACCTATTGCATACAGTCTTGTTCTTTGGACACGTCTCGATTTCAATGGAGCTCCATGCCTTATTTTGGCTATATATGTACTTAAAGCAAACAAGTTTGAGAAATCTTAGAATGGCTTCTCATAGAAGCTTTTAGCTATAGTCTTTCAAGCTTAAAGCTAGCTATTCCATCTGCAGCAATGTTGTGGTAAGCATCCTCCACTTTTTGCCTTGAATGAAGCTTATGGAATAACATGTTGATTGGTTAACCAATTGGTAACTCATGGGTCTTTCTTGCTTTCTGTTGTTATAATTGGTTAAAGTTTGGAGTATTGGAGGTCGAGGTTATGGTTTTCTTAGCTAGGTTGATGCCAAACCTGGAAACAAGTACTTCATTGGTAGCAATGTGGTAAGTAAATTCTATTTTTCATGTTGTTCTCAGTCCTTCCCATTTTTCTTATTTAGTTTTCCTTTTCTTGATCCTTCAGTGACAGTACACAAATCATTGCCTACATGATCACTTGTGGACTCAGTGCTACGGCAAGGTTTGTTATTCCTACATAGATTGAATTGAGTTTTAATTTTATCTCGATTGAAGTATTGATATGATTAAATGATTTTTAATCCATCAGCTTAAACTTCTACGTGTTTCTAATTAATTAACTATAATAATACTATTCCAAAATCCTTTTTATTACAATGTTCATTATTTTCTGCCCATTCTCATTTTCTTTTCTGTTATAGTATTTATTATTTTCTACATAGACTAAAATAGTTTGAATCACAAACACAAACAAGTATAACTACAAACTATTGTAACCCACAACTTATAATAACTACTAGCTATAATAACTTACTTAACGTTCGAACATTCCGTAGTTTATTGAACTCATATCTTAATATAATTTCCTAATTTAACCTTCACATGTACCTTATTTTATTTTGTTCATCATGTCCTTCTGCAACACTAAATATATTGAAAGTTTTCCTTCTCAAACAAATGATACTTTCTGACAGCGCAAGGGTTTCAAATGAATTGGGAGCATGCAATTTTGACAAAGTCAAAACTGCCATGTTTGCAACTCTCAAGCTTTCTGTTCTCCTTCCTCTACCGGTTGTTTTAACACTTGCATTTGGTTATAACACCTGGTCTAGCTTCTTCATCAAACATTACAATAATGGATGA ATGCCTTTGGTTCTCTTCTCTGCTATCCCAATGCTCATCCACATACCTATTGCATACAGTCTTGTTCTTTGGACACGTCTCGATTTCAATGGAGCTCCATGCCTTATTTTGGCTATATATTTTGGAGTATTGGAGGTCGAGGTTATGGTTTTCTTAGCTAGGTTGATGCCAAACCTGGAAACAAGTACTTCATTGGTAGCAATGTGTGACAGTACACAAATCATTGCCTACATGATCACTTGTGGACTCAGTGCTACGGCAAGCGCAAGGGTTTCAAATGAATTGGGAGCATGCAATTTTGACAAAGTCAAAACTGCCATGTTTGCAACTCTCAAGCTTTCTGTTCTCCTTCCTCTACCGGTTGTTTTAACACTTGCATTTGGTTATAACACCTGGTCTAGCTTCTTCATCAAACATTACAATAATGGATGA ATGCCTTTGGTTCTCTTCTCTGCTATCCCAATGCTCATCCACATACCTATTGCATACAGTCTTGTTCTTTGGACACGTCTCGATTTCAATGGAGCTCCATGCCTTATTTTGGCTATATATTTTGGAGTATTGGAGGTCGAGGTTATGGTTTTCTTAGCTAGGTTGATGCCAAACCTGGAAACAAGTACTTCATTGGTAGCAATGTGTGACAGTACACAAATCATTGCCTACATGATCACTTGTGGACTCAGTGCTACGGCAAGCGCAAGGGTTTCAAATGAATTGGGAGCATGCAATTTTGACAAAGTCAAAACTGCCATGTTTGCAACTCTCAAGCTTTCTGTTCTCCTTCCTCTACCGGTTGTTTTAACACTTGCATTTGGTTATAACACCTGGTCTAGCTTCTTCATCAAACATTACAATAATGGATGA MPLVLFSAIPMLIHIPIAYSLVLWTRLDFNGAPCLILAIYFGVLEVEVMVFLARLMPNLETSTSLVAMCDSTQIIAYMITCGLSATASARVSNELGACNFDKVKTAMFATLKLSVLLPLPVVLTLAFGYNTWSSFFIKHYNNG* Homology
BLAST of Chy6G116890 vs. ExPASy Swiss-Prot
Match: Q9LUH2 (Protein DETOXIFICATION 19 OS=Arabidopsis thaliana OX=3702 GN=DTX19 PE=2 SV=1) HSP 1 Score: 90.9 bits (224), Expect = 1.3e-17 Identity = 70/186 (37.63%), Postives = 91/186 (48.92%), Query Frame = 0
BLAST of Chy6G116890 vs. ExPASy Swiss-Prot
Match: Q9LUH3 (Protein DETOXIFICATION 18 OS=Arabidopsis thaliana OX=3702 GN=DTX18 PE=2 SV=1) HSP 1 Score: 87.8 bits (216), Expect = 1.1e-16 Identity = 67/182 (36.81%), Postives = 90/182 (49.45%), Query Frame = 0
BLAST of Chy6G116890 vs. ExPASy Swiss-Prot
Match: Q8VYL8 (Protein DETOXIFICATION 10 OS=Arabidopsis thaliana OX=3702 GN=DTX10 PE=2 SV=1) HSP 1 Score: 54.3 bits (129), Expect = 1.3e-06 Identity = 31/90 (34.44%), Postives = 53/90 (58.89%), Query Frame = 0
BLAST of Chy6G116890 vs. ExPASy Swiss-Prot
Match: Q8L731 (Protein DETOXIFICATION 12 OS=Arabidopsis thaliana OX=3702 GN=DTX12 PE=2 SV=1) HSP 1 Score: 53.5 bits (127), Expect = 2.3e-06 Identity = 31/90 (34.44%), Postives = 52/90 (57.78%), Query Frame = 0
BLAST of Chy6G116890 vs. ExPASy Swiss-Prot
Match: Q94AL1 (Protein DETOXIFICATION 13 OS=Arabidopsis thaliana OX=3702 GN=DTX13 PE=2 SV=1) HSP 1 Score: 51.6 bits (122), Expect = 8.6e-06 Identity = 30/90 (33.33%), Postives = 51/90 (56.67%), Query Frame = 0
BLAST of Chy6G116890 vs. ExPASy TrEMBL
Match: A0A1S3C2Z1 (Protein DETOXIFICATION OS=Cucumis melo OX=3656 GN=LOC103496079 PE=3 SV=1) HSP 1 Score: 176.0 bits (445), Expect = 1.1e-40 Identity = 110/184 (59.78%), Postives = 117/184 (63.59%), Query Frame = 0
BLAST of Chy6G116890 vs. ExPASy TrEMBL
Match: A0A6J1E8D8 (Protein DETOXIFICATION OS=Cucurbita moschata OX=3662 GN=LOC111430819 PE=3 SV=1) HSP 1 Score: 168.7 bits (426), Expect = 1.8e-38 Identity = 102/183 (55.74%), Postives = 115/183 (62.84%), Query Frame = 0
BLAST of Chy6G116890 vs. ExPASy TrEMBL
Match: A0A6J1J241 (Protein DETOXIFICATION OS=Cucurbita maxima OX=3661 GN=LOC111482720 PE=3 SV=1) HSP 1 Score: 165.2 bits (417), Expect = 2.0e-37 Identity = 99/183 (54.10%), Postives = 113/183 (61.75%), Query Frame = 0
BLAST of Chy6G116890 vs. ExPASy TrEMBL
Match: A0A6J1E4Y6 (Protein DETOXIFICATION OS=Cucurbita moschata OX=3662 GN=LOC111430819 PE=3 SV=1) HSP 1 Score: 164.5 bits (415), Expect = 3.4e-37 Identity = 102/184 (55.43%), Postives = 116/184 (63.04%), Query Frame = 0
BLAST of Chy6G116890 vs. ExPASy TrEMBL
Match: A0A6J1J556 (Protein DETOXIFICATION OS=Cucurbita maxima OX=3661 GN=LOC111482720 PE=3 SV=1) HSP 1 Score: 161.0 bits (406), Expect = 3.7e-36 Identity = 99/184 (53.80%), Postives = 114/184 (61.96%), Query Frame = 0
BLAST of Chy6G116890 vs. NCBI nr
Match: XP_008456028.1 (PREDICTED: protein DETOXIFICATION 18-like [Cucumis melo]) HSP 1 Score: 175 bits (444), Expect = 1.10e-49 Identity = 113/185 (61.08%), Postives = 121/185 (65.41%), Query Frame = 0
BLAST of Chy6G116890 vs. NCBI nr
Match: XP_038903838.1 (protein DETOXIFICATION 18-like [Benincasa hispida]) HSP 1 Score: 174 bits (441), Expect = 3.23e-49 Identity = 112/185 (60.54%), Postives = 119/185 (64.32%), Query Frame = 0
BLAST of Chy6G116890 vs. NCBI nr
Match: XP_022923003.1 (protein DETOXIFICATION 18-like isoform X2 [Cucurbita moschata]) HSP 1 Score: 167 bits (424), Expect = 1.11e-46 Identity = 104/183 (56.83%), Postives = 117/183 (63.93%), Query Frame = 0
BLAST of Chy6G116890 vs. NCBI nr
Match: XP_023552679.1 (protein DETOXIFICATION 18-like isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 166 bits (419), Expect = 6.01e-46 Identity = 102/183 (55.74%), Postives = 116/183 (63.39%), Query Frame = 0
BLAST of Chy6G116890 vs. NCBI nr
Match: XP_022984412.1 (protein DETOXIFICATION 18-like isoform X2 [Cucurbita maxima]) HSP 1 Score: 164 bits (415), Expect = 2.32e-45 Identity = 101/183 (55.19%), Postives = 115/183 (62.84%), Query Frame = 0
BLAST of Chy6G116890 vs. TAIR 10
Match: AT3G23560.1 (MATE efflux family protein ) HSP 1 Score: 90.9 bits (224), Expect = 9.1e-19 Identity = 70/186 (37.63%), Postives = 91/186 (48.92%), Query Frame = 0
BLAST of Chy6G116890 vs. TAIR 10
Match: AT3G23550.1 (MATE efflux family protein ) HSP 1 Score: 87.8 bits (216), Expect = 7.7e-18 Identity = 67/182 (36.81%), Postives = 90/182 (49.45%), Query Frame = 0
BLAST of Chy6G116890 vs. TAIR 10
Match: AT1G15150.1 (MATE efflux family protein ) HSP 1 Score: 54.3 bits (129), Expect = 9.4e-08 Identity = 31/90 (34.44%), Postives = 53/90 (58.89%), Query Frame = 0
BLAST of Chy6G116890 vs. TAIR 10
Match: AT1G15170.1 (MATE efflux family protein ) HSP 1 Score: 53.5 bits (127), Expect = 1.6e-07 Identity = 31/90 (34.44%), Postives = 52/90 (57.78%), Query Frame = 0
BLAST of Chy6G116890 vs. TAIR 10
Match: AT1G15180.1 (MATE efflux family protein ) HSP 1 Score: 51.6 bits (122), Expect = 6.1e-07 Identity = 30/90 (33.33%), Postives = 51/90 (56.67%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|