Chy6G116480 (gene) Cucumber (hystrix) v1

Overview


Name	Chy6G116480
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Nigrin b-like
Location	chrH06: 9509575 .. 9510462 (-)
RNA-Seq Expression	Chy6G116480
Synteny	Chy6G116480

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAGAAATCGTGTTGAGCATCATTGTAGCCTTCTCACTCACCACCCATTTTGCCATTGCAGTGTCCCCCAACTATGGATATGGAGTTGGATATGGAGGCGTCCCTGGAGCCACACATCTTATGGGTCGAGATGGATTGTGTTTAGAGATGATGCTTCTAAGGTCTTACAAACCTACAGGTATTAATTTTCCAACTCAATTATCACCATGTGACGAGAAGAAACAAACTCAATTATGGACAGTTGTCGGAGATGGCACAATTCGACCCACGAATGATAAATTTTGCTTGGCTGCTGACGTTTTTTATGGGGTCATAAATAAAGCAATAGTAAGTGAGTGTGGTAAAGTGTTAGATCCTAACAAGAAATGGACCCACAAGAATGACGGAACCATAGCCCTCGCCGATTCAAGATTGGTTCTAACAGGAGATTTAGACTACGTGACATTGCAAAGTAACAAATATACACCATCACAAAGTTGGGAAGTCACAGAAAGTTTAAACCCAATGGTTGCAAACATCGAATGGCTTAACAACTTGTGTTTGCAATATACAGACGATTCAAGTCATGTGGGATTGAATGGATGTAATACAGGCATTCAGTACCAAAGATGGGCGTTGTATGCTGATGGAACCATTCGACAACATGTGAATAAAAACTATTGCTTGACTTCTGAACAAGATTTCGGTCGCTTTGTAGTTGTGTCTAAGTGTGAAGACAAACCGCAACAACGCTGGAGTCTTGATGCTAAAGACAATACCATTGATCATCCCAACACTGACATGGTCCTGGATGTGTTTAGTGTGCCTGACTCTGTTTTTCCATCAGTACTCGTTACGAACCGTCGTGATGGAAGTGCTAGCCAACGATGGACTATTATTAACTAA

mRNA sequence

ATGAAAGAAATCGTGTTGAGCATCATTGTAGCCTTCTCACTCACCACCCATTTTGCCATTGCAGTGTCCCCCAACTATGGATATGGAGTTGGATATGGAGGCGTCCCTGGAGCCACACATCTTATGGGTCGAGATGGATTGTGTTTAGAGATGATGCTTCTAAGGTCTTACAAACCTACAGGTATTAATTTTCCAACTCAATTATCACCATGTGACGAGAAGAAACAAACTCAATTATGGACAGTTGTCGGAGATGGCACAATTCGACCCACGAATGATAAATTTTGCTTGGCTGCTGACGTTTTTTATGGGGTCATAAATAAAGCAATAGTAAGTGAGTGTGGTAAAGTGTTAGATCCTAACAAGAAATGGACCCACAAGAATGACGGAACCATAGCCCTCGCCGATTCAAGATTGGTTCTAACAGGAGATTTAGACTACGTGACATTGCAAAGTAACAAATATACACCATCACAAAGTTGGGAAGTCACAGAAAGTTTAAACCCAATGGTTGCAAACATCGAATGGCTTAACAACTTGTGTTTGCAATATACAGACGATTCAAGTCATGTGGGATTGAATGGATGTAATACAGGCATTCAGTACCAAAGATGGGCGTTGTATGCTGATGGAACCATTCGACAACATGTGAATAAAAACTATTGCTTGACTTCTGAACAAGATTTCGGTCGCTTTGTAGTTGTGTCTAAGTGTGAAGACAAACCGCAACAACGCTGGAGTCTTGATGCTAAAGACAATACCATTGATCATCCCAACACTGACATGGTCCTGGATGTGTTTAGTGTGCCTGACTCTGTTTTTCCATCAGTACTCGTTACGAACCGTCGTGATGGAAGTGCTAGCCAACGATGGACTATTATTAACTAA

Coding sequence (CDS)

ATGAAAGAAATCGTGTTGAGCATCATTGTAGCCTTCTCACTCACCACCCATTTTGCCATTGCAGTGTCCCCCAACTATGGATATGGAGTTGGATATGGAGGCGTCCCTGGAGCCACACATCTTATGGGTCGAGATGGATTGTGTTTAGAGATGATGCTTCTAAGGTCTTACAAACCTACAGGTATTAATTTTCCAACTCAATTATCACCATGTGACGAGAAGAAACAAACTCAATTATGGACAGTTGTCGGAGATGGCACAATTCGACCCACGAATGATAAATTTTGCTTGGCTGCTGACGTTTTTTATGGGGTCATAAATAAAGCAATAGTAAGTGAGTGTGGTAAAGTGTTAGATCCTAACAAGAAATGGACCCACAAGAATGACGGAACCATAGCCCTCGCCGATTCAAGATTGGTTCTAACAGGAGATTTAGACTACGTGACATTGCAAAGTAACAAATATACACCATCACAAAGTTGGGAAGTCACAGAAAGTTTAAACCCAATGGTTGCAAACATCGAATGGCTTAACAACTTGTGTTTGCAATATACAGACGATTCAAGTCATGTGGGATTGAATGGATGTAATACAGGCATTCAGTACCAAAGATGGGCGTTGTATGCTGATGGAACCATTCGACAACATGTGAATAAAAACTATTGCTTGACTTCTGAACAAGATTTCGGTCGCTTTGTAGTTGTGTCTAAGTGTGAAGACAAACCGCAACAACGCTGGAGTCTTGATGCTAAAGACAATACCATTGATCATCCCAACACTGACATGGTCCTGGATGTGTTTAGTGTGCCTGACTCTGTTTTTCCATCAGTACTCGTTACGAACCGTCGTGATGGAAGTGCTAGCCAACGATGGACTATTATTAACTAA

Protein sequence

MKEIVLSIIVAFSLTTHFAIAVSPNYGYGVGYGGVPGATHLMGRDGLCLEMMLLRSYKPTGINFPTQLSPCDEKKQTQLWTVVGDGTIRPTNDKFCLAADVFYGVINKAIVSECGKVLDPNKKWTHKNDGTIALADSRLVLTGDLDYVTLQSNKYTPSQSWEVTESLNPMVANIEWLNNLCLQYTDDSSHVGLNGCNTGIQYQRWALYADGTIRQHVNKNYCLTSEQDFGRFVVVSKCEDKPQQRWSLDAKDNTIDHPNTDMVLDVFSVPDSVFPSVLVTNRRDGSASQRWTIIN*

Homology

[Close]

BLAST of Chy6G116480 vs. ExPASy Swiss-Prot
Match: P33183 (Nigrin b OS=Sambucus nigra OX=4202 PE=1 SV=2)

HSP 1 Score: 122.1 bits (305), Expect = 1.1e-26
Identity = 77/257 (29.96%), Postives = 125/257 (48.64%), Query Frame = 0


Query: 40  HLMGRDGLCLEMMLLRSYKPTGINFPTQLSPCDEKKQTQLWTVVGDGTIRPTNDKFCLAA 99
           +++GRDGLC+++     Y   G   P QL PC  ++  Q WT   D TIR      C+ A
Sbjct: 311 NIVGRDGLCVDVR--NGYDTDGT--PLQLWPCGTQR-NQRWTFDSDDTIRSMGK--CMTA 370

Query: 100 DVFYGVINKAIVSECGKVLDPNKKWTHKNDGTIALADSRLVLT----GDLDYVTLQSNKY 159
           +      N  ++  C    +   KW    DG+I    S LV+T         + L+ N Y
Sbjct: 371 NGLNNGSN-IVIFNCSTAAENAIKWEVPIDGSIINPSSGLVMTAPRAASRTILLLEDNIY 430

Query: 160 TPSQSWEVTESLNPMVANIEWLNNLCLQYTDDSSHVGLNGCNTGIQYQRWALYADGTIRQ 219
             SQ W VT ++ P+VA+I     +CLQ   +++ V +  C      Q+WALY D TIR 
Sbjct: 431 AASQGWTVTNNVKPIVASIVGYKEMCLQSNGENNGVWMEDCEATSLQQQWALYGDRTIRV 490

Query: 220 HVNKNYCLTSE-QDFGRFVVVSKCEDKPQQRWSLDAKDNTIDHPNTDMVLDVFSVPDSVF 279
           +  +  C+T+   +    +++ KC+  P QRW  ++ D  I +P +  V+DV +   +V 
Sbjct: 491 NSTRGLCVTTNGYNSKDLIIILKCQGLPSQRWFFNS-DGAIVNPKSRHVMDVRA--SNVS 550

Query: 280 PSVLVTNRRDGSASQRW 292
              ++     G+ +Q+W
Sbjct: 551 LREIIIFPATGNPNQQW 556

[Close]

BLAST of Chy6G116480 vs. ExPASy Swiss-Prot
Match: Q41358 (Ribosome-inactivating protein SNAI OS=Sambucus nigra OX=4202 GN=SNA-I PE=1 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 1.4e-26
Identity = 83/256 (32.42%), Postives = 124/256 (48.44%), Query Frame = 0


Query: 41  LMGRDGLCLEMMLLRSYKPTGINFPTQLSPCDEKKQTQLWTVVGDGTIRPTNDKFCLAAD 100
           + G DGLC+++     Y       P QL PC   +  QLWT   DGTIR      CL A 
Sbjct: 325 ISGWDGLCVDV----RYGHYIDGNPVQLRPCG-NECNQLWTFRTDGTIRWLGK--CLTAS 384

Query: 101 VFYGVINKAIVSECGKVLDPNKKWTHKNDGTIALADSRLVLT----GDLDYVTLQSNKYT 160
                 +  ++ +C  V     KW    DGTI    S LVLT     +   ++L++N + 
Sbjct: 385 ------SSVMIYDCNTVPPEATKWVVSIDGTITNPHSGLVLTAPQAAEGTALSLENNIHA 444

Query: 161 PSQSWEVTESLNPMVANIEWLNNLCLQYTDDSSHVGLNGCNTGIQYQRWALYADGTIRQH 220
             Q W V + + P+V  I     +CL+   +++ V L  C      Q WALY DGTIR +
Sbjct: 445 ARQGWTVGD-VEPLVTFIVGYKQMCLRENGENNFVWLEDCVLNRVQQEWALYGDGTIRVN 504

Query: 221 VNKNYCLTSE-QDFGRFVVVSKCEDKPQQRWSLDAKDNTIDHPNTDMVLDVFSVPDSVFP 280
            N++ C+TSE  +    +V+ KCE    QRW  +  + TI +PN  +++DV     S+  
Sbjct: 505 SNRSLCVTSEDHEPSDLIVILKCEGSGNQRWVFNT-NGTISNPNAKLLMDVAQRDVSLRK 563

Query: 281 SVLVTNRRDGSASQRW 292
            +L   R  G+ +Q+W
Sbjct: 565 IILY--RPTGNPNQQW 563

[Close]

BLAST of Chy6G116480 vs. ExPASy Swiss-Prot
Match: O22415 (Ribosome-inactivating protein SNAIf OS=Sambucus nigra OX=4202 GN=SNA-If PE=1 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 1.3e-24
Identity = 81/256 (31.64%), Postives = 121/256 (47.27%), Query Frame = 0


Query: 41  LMGRDGLCLEMMLLRSYKPTGINFPTQLSPCDEKKQTQLWTVVGDGTIRPTNDKFCLAAD 100
           + G DGLC++   +R       N   QL PC   +  QLWT   DGTIR      CL   
Sbjct: 325 ISGWDGLCVD---VRDGHYIDGN-TVQLGPCG-NECNQLWTFRTDGTIRWLGK--CLTTS 384

Query: 101 VFYGVINKAIVSECGKVLDPNKKWTHKNDGTIALADSRLVLT----GDLDYVTLQSNKYT 160
                 +  ++ +C  V     KW    DGTI    S LVLT     +   ++L++N + 
Sbjct: 385 ------SSVMIYDCNTVPPEATKWVVSTDGTITNPRSGLVLTAPQAAEGTALSLENNIHA 444

Query: 161 PSQSWEVTESLNPMVANIEWLNNLCLQYTDDSSHVGLNGCNTGIQYQRWALYADGTIRQH 220
             Q W V + + P+V  I     +CL    +++ V L  C      Q WALY DGTIR +
Sbjct: 445 ARQGWTVGD-VEPLVTFIVGYKQMCLTENGENNFVWLEDCVLNRVEQEWALYGDGTIRVN 504

Query: 221 VNKNYCLTSE-QDFGRFVVVSKCEDKPQQRWSLDAKDNTIDHPNTDMVLDVFSVPDSVFP 280
            N++ C+TSE  +    +V+ KCE    QRW  +  + TI +PN  +V+DV     +V  
Sbjct: 505 SNRSLCVTSEDHEPSDLIVILKCEGSGNQRWVFNT-NGTISNPNAKLVMDV--AQSNVSL 563

Query: 281 SVLVTNRRDGSASQRW 292
             ++     G+ +Q+W
Sbjct: 565 RKIILYPPTGNPNQQW 563

[Close]

BLAST of Chy6G116480 vs. ExPASy Swiss-Prot
Match: U3KRF8 (Seed lectin (Fragments) OS=Trichosanthes anguina OX=50544 PE=1 SV=2)

HSP 1 Score: 114.0 bits (284), Expect = 2.9e-24
Identity = 78/268 (29.10%), Postives = 129/268 (48.13%), Query Frame = 0


Query: 39  THLMGRDGLCLEMMLLRSYKPTGINFPTQLSPCDEKKQTQLWTVVGDGTIRPTNDKFCLA 98
           T + GRD LC+++    +   T       L PC + +  Q WT   DGT+R      CLA
Sbjct: 265 TRISGRDALCVDV----AGALTSDGSRLILYPCGQ-QVNQKWTFHSDGTVRSLGK--CLA 324

Query: 99  A-DVFYGVINKAIVSECGKVLDPNKKWTHKNDGTI--------ALADSRLVLTGDLDYVT 158
             +  +G  N  ++ +C K+   +  W     GTI        AL  ++   + +L   T
Sbjct: 325 TNNSKFG--NLVVIYDCSKLAAEDISWDVSVGGTIMNPNYEDLALTSNKATRSTNL---T 384

Query: 159 LQSNKYTPSQSWEVTESLNPMVANIEWLNNLCLQYTDDSSHVGLNGCNTGIQYQRWALYA 218
           ++ N Y+ SQ W V   + P++ +I  L+++CL+ TD ++++ L  C    + Q WALY+
Sbjct: 385 MEVNTYSASQGWRVGNYVQPIIGSIVGLDDMCLEATDGNTNMWLEECVPNQREQSWALYS 444

Query: 219 DGTIRQHVNKNYCLT---SEQDFGRFVVVSKCEDKPQQRWSLDAKDNTIDHP-NTDMVLD 278
           DGTIR   N+  C+T   S  D  + + +  C+    QRW   A D +I  P N  + +D
Sbjct: 445 DGTIRVDDNRELCVTASSSTYDNWKVITILNCDGSNNQRWVFLA-DGSISTPGNQRLAMD 504

Query: 279 VFSVPDSVFPSVLVTNRRDGSASQRWTI 294
           V      V    ++ +R  G  +Q+W +
Sbjct: 505 V--ARSDVDLKKIILHRPHGDLNQQWVL 517

[Close]

BLAST of Chy6G116480 vs. ExPASy Swiss-Prot
Match: P02879 (Ricin OS=Ricinus communis OX=3988 PE=1 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 9.3e-23
Identity = 89/277 (32.13%), Postives = 128/277 (46.21%), Query Frame = 0


Query: 22  VSPNYGYGVGYGGVPGATHLMGRDGLCLEMMLLRSYKPTGINFPTQLSPCDEKKQ-TQLW 81
           V PN+   V     P    ++GR+GLC+++   R +    I    QL PC       QLW
Sbjct: 309 VVPNFNADVCMDPEP-IVRIVGRNGLCVDVRDGRFHNGNAI----QLWPCKSNTDANQLW 368

Query: 82  TVVGDGTIRPTNDKFCLAADVFYGVINKAIVSECGKVLDPNKKWTHKNDGTIALADSRLV 141
           T+  D TIR +N K         GV    ++ +C        +W   ++GTI    S LV
Sbjct: 369 TLKRDNTIR-SNGKCLTTYGYSPGVY--VMIYDCNTAATDATRWQIWDNGTIINPRSSLV 428

Query: 142 LTGDL----DYVTLQSNKYTPSQSWEVTESLNPMVANIEWLNNLCLQYTDDSSHVGLNGC 201
           L          +T+Q+N Y  SQ W  T +  P V  I  L  LCLQ   +S  V +  C
Sbjct: 429 LAATSGNSGTTLTVQTNIYAVSQGWLPTNNTQPFVTTIVGLYGLCLQ--ANSGQVWIEDC 488

Query: 202 NTGIQYQRWALYADGTIRQHVNKNYCLTSEQDFGRFVV-VSKCEDKPQ-QRWSLDAKDNT 261
           ++    Q+WALYADG+IR   N++ CLTS+ +    VV +  C      QRW +   D T
Sbjct: 489 SSEKAEQQWALYADGSIRPQQNRDNCLTSDSNIRETVVKILSCGPASSGQRW-MFKNDGT 548

Query: 262 IDHPNTDMVLDVFSVPDSVFPSVLVTNRRDGSASQRW 292
           I +  + +VLDV +   S+   +L      G  +Q W
Sbjct: 549 ILNLYSGLVLDVRASDPSLKQIILYP--LHGDPNQIW 572

[Close]

BLAST of Chy6G116480 vs. ExPASy TrEMBL
Match: Q9SLV9 (XSP30 OS=Cucumis sativus OX=3659 GN=XSP30 PE=2 SV=1)

HSP 1 Score: 561.6 bits (1446), Expect = 1.9e-156
Identity = 268/295 (90.85%), Postives = 276/295 (93.56%), Query Frame = 0


Query: 1   MKEIVLSIIVAFSLTTHFAIAVSPNYGYGVGYGGVPGATHLMGRDGLCLEMMLLRSYKPT 60
           MKEIVLSIIVAFSLTT  AIAV PNYGYGVGYGGVPGATHL+GRDGLCLEM     YKP 
Sbjct: 1   MKEIVLSIIVAFSLTTQLAIAVPPNYGYGVGYGGVPGATHLVGRDGLCLEMS--PWYKPA 60

Query: 61  GINFPTQLSPCDEKKQTQLWTVVGDGTIRPTNDKFCLAADVFYGVINKAIVSECGKVLDP 120
           GINFPT+LSPCDEKKQTQLWT+VGDGTIRP NDKFCLAA+VFYGVINKA+VSECGKV DP
Sbjct: 61  GINFPTRLSPCDEKKQTQLWTIVGDGTIRPMNDKFCLAAEVFYGVINKAVVSECGKVSDP 120

Query: 121 NKKWTHKNDGTIALADSRLVLTGDLDYVTLQSNKYTPSQSWEVTESLNPMVANIEWLNNL 180
           NKKWT KNDGTIAL DSR+VLTGDLDYVTLQSNKYTPSQSWEVTESLN MVANIEWLNNL
Sbjct: 121 NKKWTQKNDGTIALVDSRMVLTGDLDYVTLQSNKYTPSQSWEVTESLNSMVANIEWLNNL 180

Query: 181 CLQYTDDSSHVGLNGCNTGIQYQRWALYADGTIRQHVNKNYCLTSEQDFGRFVVVSKCED 240
           CLQ TDDSSHVGLNGCNT  +YQRWALYADGTIRQHVNKNYCLTS+QDFGRFVVVSKCED
Sbjct: 181 CLQSTDDSSHVGLNGCNTDNKYQRWALYADGTIRQHVNKNYCLTSDQDFGRFVVVSKCED 240

Query: 241 KPQQRWSLDAKDNTIDHPNTDMVLDVFSVPDSVFPSVLVTNRRDGSASQRWTIIN 296
           KPQQRWSLDAKD TIDHPNTDMVLDVFSVPDS FPSVLVTNRRDGSASQRWTIIN
Sbjct: 241 KPQQRWSLDAKDYTIDHPNTDMVLDVFSVPDSTFPSVLVTNRRDGSASQRWTIIN 293

[Close]

BLAST of Chy6G116480 vs. ExPASy TrEMBL
Match: A0A0A0L9D1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G217160 PE=4 SV=1)

HSP 1 Score: 560.1 bits (1442), Expect = 5.6e-156
Identity = 267/295 (90.51%), Postives = 275/295 (93.22%), Query Frame = 0


Query: 1   MKEIVLSIIVAFSLTTHFAIAVSPNYGYGVGYGGVPGATHLMGRDGLCLEMMLLRSYKPT 60
           MKEIVLSIIVAFSLTT   IAV PNYGYGVGYGGVPGATHL+GRDGLCLEM     YKP 
Sbjct: 1   MKEIVLSIIVAFSLTTQLVIAVPPNYGYGVGYGGVPGATHLVGRDGLCLEMS--PWYKPA 60

Query: 61  GINFPTQLSPCDEKKQTQLWTVVGDGTIRPTNDKFCLAADVFYGVINKAIVSECGKVLDP 120
           GINFPT+LSPCDEKKQTQLWT+VGDGTIRP NDKFCLAA+VFYGVINKA+VSECGKV DP
Sbjct: 61  GINFPTRLSPCDEKKQTQLWTIVGDGTIRPMNDKFCLAAEVFYGVINKAVVSECGKVSDP 120

Query: 121 NKKWTHKNDGTIALADSRLVLTGDLDYVTLQSNKYTPSQSWEVTESLNPMVANIEWLNNL 180
           NKKWT KNDGTIAL DSR+VLTGDLDYVTLQSNKYTPSQSWEVTESLN MVANIEWLNNL
Sbjct: 121 NKKWTQKNDGTIALVDSRMVLTGDLDYVTLQSNKYTPSQSWEVTESLNSMVANIEWLNNL 180

Query: 181 CLQYTDDSSHVGLNGCNTGIQYQRWALYADGTIRQHVNKNYCLTSEQDFGRFVVVSKCED 240
           CLQ TDDSSHVGLNGCNT  +YQRWALYADGTIRQHVNKNYCLTS+QDFGRFVVVSKCED
Sbjct: 181 CLQSTDDSSHVGLNGCNTDNKYQRWALYADGTIRQHVNKNYCLTSDQDFGRFVVVSKCED 240

Query: 241 KPQQRWSLDAKDNTIDHPNTDMVLDVFSVPDSVFPSVLVTNRRDGSASQRWTIIN 296
           KPQQRWSLDAKD TIDHPNTDMVLDVFSVPDS FPSVLVTNRRDGSASQRWTIIN
Sbjct: 241 KPQQRWSLDAKDYTIDHPNTDMVLDVFSVPDSTFPSVLVTNRRDGSASQRWTIIN 293

[Close]

BLAST of Chy6G116480 vs. ExPASy TrEMBL
Match: A0A0A0LAC2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G217140 PE=4 SV=1)

HSP 1 Score: 528.9 bits (1361), Expect = 1.4e-146
Identity = 250/293 (85.32%), Postives = 269/293 (91.81%), Query Frame = 0


Query: 1   MKEIVLSIIVAFSLTTHFAIAVSPNYGYGVGYGGVPGATHLMGRDGLCLEMMLLRSYKPT 60
           MKEIVLSIIVAFSLTT   IAV PNYGYGVGYGGVPGATHL+GRDGLCLEM+LLRSYKP 
Sbjct: 1   MKEIVLSIIVAFSLTTQLVIAVPPNYGYGVGYGGVPGATHLVGRDGLCLEMVLLRSYKPA 60

Query: 61  GINFPTQLSPCDEKKQTQLWTVVGDGTIRPTNDKFCLAADVFYGVINKAIVSECGKVLDP 120
           GINFPT+L PCDEKKQTQLWTVVGDGTIRP ND+FCLAADVFYGVINKA+VSECGKV D 
Sbjct: 61  GINFPTRLLPCDEKKQTQLWTVVGDGTIRPMNDRFCLAADVFYGVINKAVVSECGKVSDS 120

Query: 121 NKKWTHKNDGTIALADSRLVLTGDLDYVTLQSNKYTPSQSWEVTESLNPMVANIEWLNNL 180
           NK+W HKNDGTIALA+SR+VLTGD DYVTLQS KYTPSQSWEVTESLNPMVANIEWLNNL
Sbjct: 121 NKQWIHKNDGTIALAESRMVLTGDSDYVTLQSIKYTPSQSWEVTESLNPMVANIEWLNNL 180

Query: 181 CLQYTDDSSHVGLNGCNTGIQYQRWALYADGTIRQHVNKNYCLTSEQDFGRFVVVSKCED 240
           CLQ TDDSS+VGLNGCNT  +YQRWALYADGTIRQHVN+NYCLTSEQ++ R VVVSKCED
Sbjct: 181 CLQSTDDSSNVGLNGCNTYTKYQRWALYADGTIRQHVNRNYCLTSEQNYDRSVVVSKCED 240

Query: 241 KPQQRWSLDAKDNTIDHPNTDMVLDVFSVPDSVFPSVLVTNRRDGSASQRWTI 294
           KPQQRWSL+AKD+TIDHPNT+MVLDV +V DS  P V+VTN  DGSASQRWT+
Sbjct: 241 KPQQRWSLNAKDSTIDHPNTNMVLDVLNVLDSASPLVIVTNHPDGSASQRWTM 293

[Close]

BLAST of Chy6G116480 vs. ExPASy TrEMBL
Match: A0A5A7T854 (Nigrin b-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold84G001540 PE=3 SV=1)

HSP 1 Score: 458.0 bits (1177), Expect = 3.0e-125
Identity = 222/294 (75.51%), Postives = 244/294 (82.99%), Query Frame = 0


Query: 1   MKEIVLSIIVAFSLTTHFAIAVSPNYGYGVGYGGVPGATHLMGRDGLCLEMMLLRSYKPT 60
           MKEIVLSIIVAFSLTTH A+AV  NYGYG  YGGVPGATHL+GRDGLCLEM     +   
Sbjct: 1   MKEIVLSIIVAFSLTTHLAMAVPSNYGYGGEYGGVPGATHLVGRDGLCLEM---SPWFYR 60

Query: 61  GINFPTQLSPCDE-KKQTQLWTVVGDGTIRPTNDKFCLAADVFYGVINKAIVSECGKVLD 120
           G NFPT+LSPCDE KKQTQLWTVVGDGTIRP NDKFCL ADV  GVINKA+V EC K  +
Sbjct: 61  GNNFPTRLSPCDEHKKQTQLWTVVGDGTIRPMNDKFCLVADVLVGVINKAVVRECAKESN 120

Query: 121 PNKKWTHKNDGTIALADSRLVLTGDLDYVTLQSNKYTPSQSWEVTESLNPMVANIEWLNN 180
            NK+WTHK DGTI   +S +VLTGD DYVTLQSNK TPSQSWE TES  PM+ANIEWLNN
Sbjct: 121 SNKRWTHKKDGTITHVESGMVLTGDSDYVTLQSNKNTPSQSWEATESSTPMIANIEWLNN 180

Query: 181 LCLQYTDDSSHVGLNGCNTGIQYQRWALYADGTIRQHVNKNYCLTSEQDFGRFVVVSKCE 240
           LCLQ TDDS+HVGLNGCN   + QRWALY DGTIRQ+VN+NYCLTS++  GRF+V+SKCE
Sbjct: 181 LCLQSTDDSNHVGLNGCNRENKDQRWALYGDGTIRQNVNRNYCLTSDEYLGRFIVMSKCE 240

Query: 241 DKPQQRWSLDAKDNTIDHPNTDMVLDVFSVPDSVFPSVLVTNRRDGSASQRWTI 294
           DKPQQRW+L AKD+TIDHPNTDMV+DV  VP   F S +VTNRRDGSASQRWTI
Sbjct: 241 DKPQQRWNLGAKDSTIDHPNTDMVMDVLFVPYYDFSSAVVTNRRDGSASQRWTI 291

[Close]

BLAST of Chy6G116480 vs. ExPASy TrEMBL
Match: A0A5D3BL95 (Nigrin b-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold252G00260 PE=4 SV=1)

HSP 1 Score: 457.2 bits (1175), Expect = 5.1e-125
Identity = 222/294 (75.51%), Postives = 244/294 (82.99%), Query Frame = 0


Query: 1   MKEIVLSIIVAFSLTTHFAIAVSPNYGYGVGYGGVPGATHLMGRDGLCLEMMLLRSYKPT 60
           MKEIVLSIIVAFSLTTH A+AV  NYGYG  YGGVPGATHL+GRDGLCLEM     +   
Sbjct: 1   MKEIVLSIIVAFSLTTHLAMAVPYNYGYGGEYGGVPGATHLVGRDGLCLEM---SPWFYR 60

Query: 61  GINFPTQLSPCDE-KKQTQLWTVVGDGTIRPTNDKFCLAADVFYGVINKAIVSECGKVLD 120
           G NFPT+LSPCDE KKQTQLWTVVGDGTIRP NDKFCL ADV  GVINKA+V EC K  +
Sbjct: 61  GNNFPTRLSPCDEHKKQTQLWTVVGDGTIRPMNDKFCLVADVLVGVINKAVVRECAKESN 120

Query: 121 PNKKWTHKNDGTIALADSRLVLTGDLDYVTLQSNKYTPSQSWEVTESLNPMVANIEWLNN 180
            NK+WTHK DGTI   +S +VLTGD DYVTLQSNK TPSQSWE TES  PM+ANIEWLNN
Sbjct: 121 SNKRWTHKKDGTITHVESGMVLTGDSDYVTLQSNKNTPSQSWEATESSTPMIANIEWLNN 180

Query: 181 LCLQYTDDSSHVGLNGCNTGIQYQRWALYADGTIRQHVNKNYCLTSEQDFGRFVVVSKCE 240
           LCLQ TDDS+HVGLNGCN   + QRWALY DGTIRQ+VN+NYCLTS++  GRF+V+SKCE
Sbjct: 181 LCLQSTDDSNHVGLNGCNRENKDQRWALYGDGTIRQNVNRNYCLTSDEYLGRFIVMSKCE 240

Query: 241 DKPQQRWSLDAKDNTIDHPNTDMVLDVFSVPDSVFPSVLVTNRRDGSASQRWTI 294
           DKPQQRW+L AKD+TIDHPNTDMV+DV  VP   F S +VTNRRDGSASQRWTI
Sbjct: 241 DKPQQRWNLGAKDSTIDHPNTDMVMDVLFVPYYDFSSAVVTNRRDGSASQRWTI 291

[Close]

BLAST of Chy6G116480 vs. NCBI nr
Match: NP_001274403.1 (uncharacterized protein LOC101221335 precursor [Cucumis sativus] >KAE8650527.1 hypothetical protein Csa_010656 [Cucumis sativus] >BAA88294.1 XSP30 [Cucumis sativus])

HSP 1 Score: 551 bits (1419), Expect = 4.62e-197
Identity = 268/295 (90.85%), Postives = 276/295 (93.56%), Query Frame = 0


Query: 1   MKEIVLSIIVAFSLTTHFAIAVSPNYGYGVGYGGVPGATHLMGRDGLCLEMMLLRSYKPT 60
           MKEIVLSIIVAFSLTT  AIAV PNYGYGVGYGGVPGATHL+GRDGLCLEM     YKP 
Sbjct: 1   MKEIVLSIIVAFSLTTQLAIAVPPNYGYGVGYGGVPGATHLVGRDGLCLEMSPW--YKPA 60

Query: 61  GINFPTQLSPCDEKKQTQLWTVVGDGTIRPTNDKFCLAADVFYGVINKAIVSECGKVLDP 120
           GINFPT+LSPCDEKKQTQLWT+VGDGTIRP NDKFCLAA+VFYGVINKA+VSECGKV DP
Sbjct: 61  GINFPTRLSPCDEKKQTQLWTIVGDGTIRPMNDKFCLAAEVFYGVINKAVVSECGKVSDP 120

Query: 121 NKKWTHKNDGTIALADSRLVLTGDLDYVTLQSNKYTPSQSWEVTESLNPMVANIEWLNNL 180
           NKKWT KNDGTIAL DSR+VLTGDLDYVTLQSNKYTPSQSWEVTESLN MVANIEWLNNL
Sbjct: 121 NKKWTQKNDGTIALVDSRMVLTGDLDYVTLQSNKYTPSQSWEVTESLNSMVANIEWLNNL 180

Query: 181 CLQYTDDSSHVGLNGCNTGIQYQRWALYADGTIRQHVNKNYCLTSEQDFGRFVVVSKCED 240
           CLQ TDDSSHVGLNGCNT  +YQRWALYADGTIRQHVNKNYCLTS+QDFGRFVVVSKCED
Sbjct: 181 CLQSTDDSSHVGLNGCNTDNKYQRWALYADGTIRQHVNKNYCLTSDQDFGRFVVVSKCED 240

Query: 241 KPQQRWSLDAKDNTIDHPNTDMVLDVFSVPDSVFPSVLVTNRRDGSASQRWTIIN 295
           KPQQRWSLDAKD TIDHPNTDMVLDVFSVPDS FPSVLVTNRRDGSASQRWTIIN
Sbjct: 241 KPQQRWSLDAKDYTIDHPNTDMVLDVFSVPDSTFPSVLVTNRRDGSASQRWTIIN 293

[Close]

BLAST of Chy6G116480 vs. NCBI nr
Match: XP_004151509.2 (nigrin b [Cucumis sativus] >KGN57577.1 hypothetical protein Csa_010264 [Cucumis sativus])

HSP 1 Score: 518 bits (1334), Expect = 4.30e-184
Identity = 250/293 (85.32%), Postives = 269/293 (91.81%), Query Frame = 0


Query: 1   MKEIVLSIIVAFSLTTHFAIAVSPNYGYGVGYGGVPGATHLMGRDGLCLEMMLLRSYKPT 60
           MKEIVLSIIVAFSLTT   IAV PNYGYGVGYGGVPGATHL+GRDGLCLEM+LLRSYKP 
Sbjct: 1   MKEIVLSIIVAFSLTTQLVIAVPPNYGYGVGYGGVPGATHLVGRDGLCLEMVLLRSYKPA 60

Query: 61  GINFPTQLSPCDEKKQTQLWTVVGDGTIRPTNDKFCLAADVFYGVINKAIVSECGKVLDP 120
           GINFPT+L PCDEKKQTQLWTVVGDGTIRP ND+FCLAADVFYGVINKA+VSECGKV D 
Sbjct: 61  GINFPTRLLPCDEKKQTQLWTVVGDGTIRPMNDRFCLAADVFYGVINKAVVSECGKVSDS 120

Query: 121 NKKWTHKNDGTIALADSRLVLTGDLDYVTLQSNKYTPSQSWEVTESLNPMVANIEWLNNL 180
           NK+W HKNDGTIALA+SR+VLTGD DYVTLQS KYTPSQSWEVTESLNPMVANIEWLNNL
Sbjct: 121 NKQWIHKNDGTIALAESRMVLTGDSDYVTLQSIKYTPSQSWEVTESLNPMVANIEWLNNL 180

Query: 181 CLQYTDDSSHVGLNGCNTGIQYQRWALYADGTIRQHVNKNYCLTSEQDFGRFVVVSKCED 240
           CLQ TDDSS+VGLNGCNT  +YQRWALYADGTIRQHVN+NYCLTSEQ++ R VVVSKCED
Sbjct: 181 CLQSTDDSSNVGLNGCNTYTKYQRWALYADGTIRQHVNRNYCLTSEQNYDRSVVVSKCED 240

Query: 241 KPQQRWSLDAKDNTIDHPNTDMVLDVFSVPDSVFPSVLVTNRRDGSASQRWTI 293
           KPQQRWSL+AKD+TIDHPNT+MVLDV +V DS  P V+VTN  DGSASQRWT+
Sbjct: 241 KPQQRWSLNAKDSTIDHPNTNMVLDVLNVLDSASPLVIVTNHPDGSASQRWTM 293

[Close]

BLAST of Chy6G116480 vs. NCBI nr
Match: KAA0039058.1 (nigrin b-like [Cucumis melo var. makuwa])

HSP 1 Score: 447 bits (1151), Expect = 2.98e-156
Identity = 222/294 (75.51%), Postives = 244/294 (82.99%), Query Frame = 0


Query: 1   MKEIVLSIIVAFSLTTHFAIAVSPNYGYGVGYGGVPGATHLMGRDGLCLEMMLLRSYKPT 60
           MKEIVLSIIVAFSLTTH A+AV  NYGYG  YGGVPGATHL+GRDGLCLEM     +   
Sbjct: 1   MKEIVLSIIVAFSLTTHLAMAVPSNYGYGGEYGGVPGATHLVGRDGLCLEMS---PWFYR 60

Query: 61  GINFPTQLSPCDE-KKQTQLWTVVGDGTIRPTNDKFCLAADVFYGVINKAIVSECGKVLD 120
           G NFPT+LSPCDE KKQTQLWTVVGDGTIRP NDKFCL ADV  GVINKA+V EC K  +
Sbjct: 61  GNNFPTRLSPCDEHKKQTQLWTVVGDGTIRPMNDKFCLVADVLVGVINKAVVRECAKESN 120

Query: 121 PNKKWTHKNDGTIALADSRLVLTGDLDYVTLQSNKYTPSQSWEVTESLNPMVANIEWLNN 180
            NK+WTHK DGTI   +S +VLTGD DYVTLQSNK TPSQSWE TES  PM+ANIEWLNN
Sbjct: 121 SNKRWTHKKDGTITHVESGMVLTGDSDYVTLQSNKNTPSQSWEATESSTPMIANIEWLNN 180

Query: 181 LCLQYTDDSSHVGLNGCNTGIQYQRWALYADGTIRQHVNKNYCLTSEQDFGRFVVVSKCE 240
           LCLQ TDDS+HVGLNGCN   + QRWALY DGTIRQ+VN+NYCLTS++  GRF+V+SKCE
Sbjct: 181 LCLQSTDDSNHVGLNGCNRENKDQRWALYGDGTIRQNVNRNYCLTSDEYLGRFIVMSKCE 240

Query: 241 DKPQQRWSLDAKDNTIDHPNTDMVLDVFSVPDSVFPSVLVTNRRDGSASQRWTI 293
           DKPQQRW+L AKD+TIDHPNTDMV+DV  VP   F S +VTNRRDGSASQRWTI
Sbjct: 241 DKPQQRWNLGAKDSTIDHPNTDMVMDVLFVPYYDFSSAVVTNRRDGSASQRWTI 291

[Close]

BLAST of Chy6G116480 vs. NCBI nr
Match: TYJ99749.1 (nigrin b-like [Cucumis melo var. makuwa])

HSP 1 Score: 447 bits (1149), Expect = 6.01e-156
Identity = 222/294 (75.51%), Postives = 244/294 (82.99%), Query Frame = 0


Query: 1   MKEIVLSIIVAFSLTTHFAIAVSPNYGYGVGYGGVPGATHLMGRDGLCLEMMLLRSYKPT 60
           MKEIVLSIIVAFSLTTH A+AV  NYGYG  YGGVPGATHL+GRDGLCLEM     +   
Sbjct: 1   MKEIVLSIIVAFSLTTHLAMAVPYNYGYGGEYGGVPGATHLVGRDGLCLEMS---PWFYR 60

Query: 61  GINFPTQLSPCDE-KKQTQLWTVVGDGTIRPTNDKFCLAADVFYGVINKAIVSECGKVLD 120
           G NFPT+LSPCDE KKQTQLWTVVGDGTIRP NDKFCL ADV  GVINKA+V EC K  +
Sbjct: 61  GNNFPTRLSPCDEHKKQTQLWTVVGDGTIRPMNDKFCLVADVLVGVINKAVVRECAKESN 120

Query: 121 PNKKWTHKNDGTIALADSRLVLTGDLDYVTLQSNKYTPSQSWEVTESLNPMVANIEWLNN 180
            NK+WTHK DGTI   +S +VLTGD DYVTLQSNK TPSQSWE TES  PM+ANIEWLNN
Sbjct: 121 SNKRWTHKKDGTITHVESGMVLTGDSDYVTLQSNKNTPSQSWEATESSTPMIANIEWLNN 180

Query: 181 LCLQYTDDSSHVGLNGCNTGIQYQRWALYADGTIRQHVNKNYCLTSEQDFGRFVVVSKCE 240
           LCLQ TDDS+HVGLNGCN   + QRWALY DGTIRQ+VN+NYCLTS++  GRF+V+SKCE
Sbjct: 181 LCLQSTDDSNHVGLNGCNRENKDQRWALYGDGTIRQNVNRNYCLTSDEYLGRFIVMSKCE 240

Query: 241 DKPQQRWSLDAKDNTIDHPNTDMVLDVFSVPDSVFPSVLVTNRRDGSASQRWTI 293
           DKPQQRW+L AKD+TIDHPNTDMV+DV  VP   F S +VTNRRDGSASQRWTI
Sbjct: 241 DKPQQRWNLGAKDSTIDHPNTDMVMDVLFVPYYDFSSAVVTNRRDGSASQRWTI 291

[Close]

BLAST of Chy6G116480 vs. NCBI nr
Match: XP_016901886.1 (PREDICTED: nigrin b-like [Cucumis melo])

HSP 1 Score: 441 bits (1135), Expect = 8.13e-154
Identity = 219/294 (74.49%), Postives = 243/294 (82.65%), Query Frame = 0


Query: 1   MKEIVLSIIVAFSLTTHFAIAVSPNYGYGVGYGGVPGATHLMGRDGLCLEMMLLRSYKPT 60
           MKEIVLSIIVAFSLTTH A+AV  NYGYG  YGGVP ATHL+GRDGLCLEM     +   
Sbjct: 1   MKEIVLSIIVAFSLTTHLAMAVPSNYGYGGEYGGVPRATHLVGRDGLCLEMS---PWFYR 60

Query: 61  GINFPTQLSPCDE-KKQTQLWTVVGDGTIRPTNDKFCLAADVFYGVINKAIVSECGKVLD 120
           G NFPT+LSPCDE KKQTQLWTVVGDGTIRP NDKFCL ADV  G+INKA+V EC K  +
Sbjct: 61  GNNFPTRLSPCDEHKKQTQLWTVVGDGTIRPMNDKFCLVADVLVGLINKAVVRECAKEPN 120

Query: 121 PNKKWTHKNDGTIALADSRLVLTGDLDYVTLQSNKYTPSQSWEVTESLNPMVANIEWLNN 180
            NK+WTHK DGTI   +S +VLTGD DYVTLQSNK TPSQSWE TES  PM+ANIEWLNN
Sbjct: 121 SNKRWTHKKDGTITHVESGMVLTGDSDYVTLQSNKNTPSQSWEATESSTPMIANIEWLNN 180

Query: 181 LCLQYTDDSSHVGLNGCNTGIQYQRWALYADGTIRQHVNKNYCLTSEQDFGRFVVVSKCE 240
           LCLQ TDDS+HVGLNGCN   + QRWALY DGTIRQ+VN+NYCLTS++  GRF+V+SKCE
Sbjct: 181 LCLQSTDDSNHVGLNGCNRENKDQRWALYGDGTIRQNVNRNYCLTSDEYLGRFIVMSKCE 240

Query: 241 DKPQQRWSLDAKDNTIDHPNTDMVLDVFSVPDSVFPSVLVTNRRDGSASQRWTI 293
           DKPQQRW+L AKD+TIDHPN+DMV+DV  VP   F S +VTNRRDGSASQRWTI
Sbjct: 241 DKPQQRWNLGAKDSTIDHPNSDMVMDVLFVPYYDFSSAVVTNRRDGSASQRWTI 291

The following BLAST results are available for this feature:

BLAST of Chy6G116480 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P33183	1.1e-26	29.96	Nigrin b OS=Sambucus nigra OX=4202 PE=1 SV=2	[more]
Q41358	1.4e-26	32.42	Ribosome-inactivating protein SNAI OS=Sambucus nigra OX=4202 GN=SNA-I PE=1 SV=1	[more]
O22415	1.3e-24	31.64	Ribosome-inactivating protein SNAIf OS=Sambucus nigra OX=4202 GN=SNA-If PE=1 SV=...	[more]
U3KRF8	2.9e-24	29.10	Seed lectin (Fragments) OS=Trichosanthes anguina OX=50544 PE=1 SV=2	[more]
P02879	9.3e-23	32.13	Ricin OS=Ricinus communis OX=3988 PE=1 SV=1	[more]

BLAST of Chy6G116480 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
Q9SLV9	1.9e-156	90.85	XSP30 OS=Cucumis sativus OX=3659 GN=XSP30 PE=2 SV=1	[more]
A0A0A0L9D1	5.6e-156	90.51	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G217160 PE=4 SV=1	[more]
A0A0A0LAC2	1.4e-146	85.32	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G217140 PE=4 SV=1	[more]
A0A5A7T854	3.0e-125	75.51	Nigrin b-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold84G001540 ...	[more]
A0A5D3BL95	5.1e-125	75.51	Nigrin b-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold252G00260 ...	[more]

BLAST of Chy6G116480 vs. NCBI nr


Match Name	E-value	Identity	Description
NP_001274403.1	4.62e-197	90.85	uncharacterized protein LOC101221335 precursor [Cucumis sativus] >KAE8650527.1 h...	[more]
XP_004151509.2	4.30e-184	85.32	nigrin b [Cucumis sativus] >KGN57577.1 hypothetical protein Csa_010264 [Cucumis ...	[more]
KAA0039058.1	2.98e-156	75.51	nigrin b-like [Cucumis melo var. makuwa]	[more]
TYJ99749.1	6.01e-156	75.51	nigrin b-like [Cucumis melo var. makuwa]	[more]
XP_016901886.1	8.13e-154	74.49	PREDICTED: nigrin b-like [Cucumis melo]	[more]

BLAST of Chy6G116480 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000772	Ricin B, lectin domain	SMART	SM00458	ricin_3	coord: 168..294 e-value: 1.0E-16 score: 71.5 coord: 36..164 e-value: 7.7E-10 score: 48.7
IPR000772	Ricin B, lectin domain	PFAM	PF00652	Ricin_B_lectin	coord: 41..161 e-value: 1.7E-13 score: 50.9 coord: 178..291 e-value: 4.7E-22 score: 78.6
IPR000772	Ricin B, lectin domain	PROSITE	PS50231	RICIN_B_LECTIN	coord: 167..294 score: 25.08
IPR000772	Ricin B, lectin domain	PROSITE	PS50231	RICIN_B_LECTIN	coord: 35..164 score: 19.495501
IPR000772	Ricin B, lectin domain	CDD	cd00161	RICIN	coord: 178..293 e-value: 2.87503E-20 score: 82.5534
IPR000772	Ricin B, lectin domain	CDD	cd00161	RICIN	coord: 40..162 e-value: 1.45001E-16 score: 72.5382
None	No IPR available	GENE3D	2.80.10.50		coord: 169..295 e-value: 1.1E-29 score: 104.7
None	No IPR available	GENE3D	2.80.10.50		coord: 36..164 e-value: 1.2E-20 score: 75.6
IPR035992	Ricin B-like lectins	SUPERFAMILY	50370	Ricin B-like lectins	coord: 41..166
IPR035992	Ricin B-like lectins	SUPERFAMILY	50370	Ricin B-like lectins	coord: 173..293

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy6G116480.1	Chy6G116480.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0017148	negative regulation of translation
molecular_function	GO:0030598	rRNA N-glycosylase activity