Chy6G116360 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTCAGGGAAAAGGCAGTGCCTTTGCTATCACTTTGTTGCTTTGCATTTTCCTCATCCAATCTGAGATTGCTCAAGCTAAAGTCTACACTGTTGGAGATGCCATAGGATGGACCTTTAATGTCAATACTTGGACTAAGGGAAAGATTTTCCGTGCTGGTGATATTATCGGTAAATTTCTCCTCCACAGCTCCTACCTATCTTTATTTTACCTGTTCTAATTATGGTTTTTGTTTGATAATAGTTACCGTTTTCAAATATAGCAGGTGTTTGGAAGAGAGGAGATTACATCGAGTAACTTCTCTGAATCATAAATTAAAAATTAAAAATGACACTAAAACTTCACCTTTACATTTATTTGCCTTAAAGATAAAAGGAAAAAAAATGAATTAGCCATTTTATATACCAAAAAGTTTTATAATTAAGCAGAAATGGATCATTAATTTAACCTCTCATTTTTCATACCCTATTAAATTAAGGTATTTTGAACAAATATGAACATATATTGATAGGTAATTTTTCTACCTGAGAGATATGAAAAGTCATATTATTTCTGATATAGTATAGCCATAGCCATTGTATTCTGATCTAAAAAAAAGTTATATGATTGAAACAGTATTCAAGTATCCTCGAATGGCGCACAATGTGGTGTCATTGAAGAACAAAGTGGCATACAATTGGTGTCTAAAACCAAAAGGTTCAAAAGTATACCAAACAGGAAAAGACAGAATCAAGCTTGTCAAAGGATACAACTATTTCATTTGCAGTTACCCTGGCCATTGCAAAGCTGGAATGAAGATTGCCATTAAAGCTATTTGA ATGGGTCAGGGAAAAGGCAGTGCCTTTGCTATCACTTTGTTGCTTTGCATTTTCCTCATCCAATCTGAGATTGCTCAAGCTAAAGTCTACACTGTTGGAGATGCCATAGGATGGACCTTTAATGTCAATACTTGGACTAAGGGAAAGATTTTCCGTGCTGGTGATATTATCGTATTCAAGTATCCTCGAATGGCGCACAATGTGGTGTCATTGAAGAACAAAGTGGCATACAATTGGTGTCTAAAACCAAAAGGTTCAAAAGTATACCAAACAGGAAAAGACAGAATCAAGCTTGTCAAAGGATACAACTATTTCATTTGCAGTTACCCTGGCCATTGCAAAGCTGGAATGAAGATTGCCATTAAAGCTATTTGA ATGGGTCAGGGAAAAGGCAGTGCCTTTGCTATCACTTTGTTGCTTTGCATTTTCCTCATCCAATCTGAGATTGCTCAAGCTAAAGTCTACACTGTTGGAGATGCCATAGGATGGACCTTTAATGTCAATACTTGGACTAAGGGAAAGATTTTCCGTGCTGGTGATATTATCGTATTCAAGTATCCTCGAATGGCGCACAATGTGGTGTCATTGAAGAACAAAGTGGCATACAATTGGTGTCTAAAACCAAAAGGTTCAAAAGTATACCAAACAGGAAAAGACAGAATCAAGCTTGTCAAAGGATACAACTATTTCATTTGCAGTTACCCTGGCCATTGCAAAGCTGGAATGAAGATTGCCATTAAAGCTATTTGA MGQGKGSAFAITLLLCIFLIQSEIAQAKVYTVGDAIGWTFNVNTWTKGKIFRAGDIIVFKYPRMAHNVVSLKNKVAYNWCLKPKGSKVYQTGKDRIKLVKGYNYFICSYPGHCKAGMKIAIKAI* Homology
BLAST of Chy6G116360 vs. ExPASy Swiss-Prot
Match: P60496 (Chemocyanin OS=Lilium longiflorum OX=4690 PE=1 SV=1) HSP 1 Score: 130.2 bits (326), Expect = 1.6e-29 Identity = 62/126 (49.21%), Postives = 81/126 (64.29%), Query Frame = 0
BLAST of Chy6G116360 vs. ExPASy Swiss-Prot
Match: Q8LG89 (Basic blue protein OS=Arabidopsis thaliana OX=3702 GN=ARPN PE=2 SV=2) HSP 1 Score: 129.4 bits (324), Expect = 2.8e-29 Identity = 63/130 (48.46%), Postives = 87/130 (66.92%), Query Frame = 0
BLAST of Chy6G116360 vs. ExPASy Swiss-Prot
Match: P00303 (Basic blue protein OS=Cucumis sativus OX=3659 PE=1 SV=1) HSP 1 Score: 122.5 bits (306), Expect = 3.4e-27 Identity = 53/96 (55.21%), Postives = 72/96 (75.00%), Query Frame = 0
BLAST of Chy6G116360 vs. ExPASy Swiss-Prot
Match: Q41001 (Blue copper protein OS=Pisum sativum OX=3888 PE=2 SV=1) HSP 1 Score: 80.9 bits (198), Expect = 1.1e-14 Identity = 49/121 (40.50%), Postives = 59/121 (48.76%), Query Frame = 0
BLAST of Chy6G116360 vs. ExPASy Swiss-Prot
Match: A0A072U307 (Blue copper protein 1b OS=Medicago truncatula OX=3880 GN=BCP1B PE=2 SV=1) HSP 1 Score: 74.3 bits (181), Expect = 1.1e-12 Identity = 42/122 (34.43%), Postives = 61/122 (50.00%), Query Frame = 0
BLAST of Chy6G116360 vs. ExPASy TrEMBL
Match: A0A0A0L9C5 (Phytocyanin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G214580 PE=4 SV=1) HSP 1 Score: 262.3 bits (669), Expect = 1.0e-66 Identity = 123/124 (99.19%), Postives = 124/124 (100.00%), Query Frame = 0
BLAST of Chy6G116360 vs. ExPASy TrEMBL
Match: A0A5A7T7X8 (Basic blue protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold252G00080 PE=4 SV=1) HSP 1 Score: 248.1 bits (632), Expect = 2.0e-62 Identity = 115/124 (92.74%), Postives = 118/124 (95.16%), Query Frame = 0
BLAST of Chy6G116360 vs. ExPASy TrEMBL
Match: A0A1S3C2E5 (basic blue protein-like OS=Cucumis melo OX=3656 GN=LOC103496129 PE=4 SV=1) HSP 1 Score: 246.9 bits (629), Expect = 4.5e-62 Identity = 114/124 (91.94%), Postives = 118/124 (95.16%), Query Frame = 0
BLAST of Chy6G116360 vs. ExPASy TrEMBL
Match: A0A6J1JBP6 (basic blue protein-like OS=Cucurbita maxima OX=3661 GN=LOC111482995 PE=4 SV=1) HSP 1 Score: 212.6 bits (540), Expect = 9.3e-52 Identity = 97/125 (77.60%), Postives = 112/125 (89.60%), Query Frame = 0
BLAST of Chy6G116360 vs. ExPASy TrEMBL
Match: A0A6J1J7L5 (basic blue protein-like OS=Cucurbita maxima OX=3661 GN=LOC111481985 PE=4 SV=1) HSP 1 Score: 210.3 bits (534), Expect = 4.6e-51 Identity = 93/123 (75.61%), Postives = 107/123 (86.99%), Query Frame = 0
BLAST of Chy6G116360 vs. NCBI nr
Match: XP_004149963.1 (basic blue protein-like [Cucumis sativus] >KGN57569.1 hypothetical protein Csa_010870 [Cucumis sativus]) HSP 1 Score: 262 bits (670), Expect = 1.70e-88 Identity = 123/124 (99.19%), Postives = 124/124 (100.00%), Query Frame = 0
BLAST of Chy6G116360 vs. NCBI nr
Match: KAA0039073.1 (basic blue protein-like [Cucumis melo var. makuwa] >TYJ99732.1 basic blue protein-like [Cucumis melo var. makuwa]) HSP 1 Score: 248 bits (633), Expect = 7.49e-83 Identity = 115/124 (92.74%), Postives = 118/124 (95.16%), Query Frame = 0
BLAST of Chy6G116360 vs. NCBI nr
Match: XP_008456090.1 (PREDICTED: basic blue protein-like [Cucumis melo]) HSP 1 Score: 247 bits (630), Expect = 2.15e-82 Identity = 114/124 (91.94%), Postives = 118/124 (95.16%), Query Frame = 0
BLAST of Chy6G116360 vs. NCBI nr
Match: XP_038878139.1 (basic blue protein-like [Benincasa hispida]) HSP 1 Score: 235 bits (600), Expect = 8.65e-78 Identity = 109/126 (86.51%), Postives = 119/126 (94.44%), Query Frame = 0
BLAST of Chy6G116360 vs. NCBI nr
Match: XP_023553464.1 (basic blue protein-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 217 bits (552), Expect = 1.75e-70 Identity = 99/125 (79.20%), Postives = 113/125 (90.40%), Query Frame = 0
BLAST of Chy6G116360 vs. TAIR 10
Match: AT2G02850.1 (plantacyanin ) HSP 1 Score: 129.4 bits (324), Expect = 2.0e-30 Identity = 63/130 (48.46%), Postives = 87/130 (66.92%), Query Frame = 0
BLAST of Chy6G116360 vs. TAIR 10
Match: AT1G17800.1 (early nodulin-like protein 22 ) HSP 1 Score: 84.0 bits (206), Expect = 9.6e-17 Identity = 46/119 (38.66%), Postives = 67/119 (56.30%), Query Frame = 0
BLAST of Chy6G116360 vs. TAIR 10
Match: AT5G26330.1 (Cupredoxin superfamily protein ) HSP 1 Score: 82.8 bits (203), Expect = 2.1e-16 Identity = 42/123 (34.15%), Postives = 64/123 (52.03%), Query Frame = 0
BLAST of Chy6G116360 vs. TAIR 10
Match: AT2G31050.1 (Cupredoxin superfamily protein ) HSP 1 Score: 82.0 bits (201), Expect = 3.7e-16 Identity = 45/124 (36.29%), Postives = 64/124 (51.61%), Query Frame = 0
BLAST of Chy6G116360 vs. TAIR 10
Match: AT3G60270.1 (Cupredoxin superfamily protein ) HSP 1 Score: 81.3 bits (199), Expect = 6.2e-16 Identity = 44/122 (36.07%), Postives = 64/122 (52.46%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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