Chy6G115970 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGCTCCATCTCTCTCTCCAATTCACATCCTCTTGCGCGGCCTTATCCTCATCATCTTCCTCACTCTCACCGTCAACAATGGTGTTCCCGCCCTCTGCTTTCGTCCAATTCTCTTTCTAAGCTACACCGGTTTGGGATCTCCGACCGATTCCCCGCTCGACCTCCCTTGCCTTTGGTTCTTGCTTCTTCTGGAGCTGGCGTCGTTGATTCCTTTCCGGTTTGTCATTTCCTTCTCATGTTTTGTTTTTAGTTTATTTACTGCGAACCGCACTCTAATTGCTGACCTACTGTTATGTAGTGAATTAGGTGTTATCTCTTCTCTTCATTAAGATTTGTATGTCTGTGTTCTACCTAAGTGAATAAGTATGGACATAACCACTAAAATATGCTTTCATTTCGGCTGTTAAGTAATATATAGAGATTATACTTTTCCTTCACGACGATTCATCCGTGGAGAAGAACCTGTACCGTCTACGATTATGCTGCATAATTTTAGAATGGAGCATAGAACCAAAGCAGACGCTCGAAAGATAAACAATTATCGATCTGGTCCTATTGGTGCTACTATGTATAATATAAGCTATATGTTATGTTTATTATATGTTTTGTTTTAGAGAGGGAGAGTTTGGGGAATTGACTTGTTTATGGCTATTTTAGAACTGAGGTTTTAAATTTCTGTTTGACGGCTTGGCTGTCGAGTTTTGCTCTTATTTTTATCATGATGATTTTCAGCTCAGAGGAACATATACGGTTGGTGATTTTATGACGAGAAAGGAGAATCTATATGTTGTTAAACCTACAACAACAGTTGATGAAGGTGCGGTTGATTGAGGGACTAAATTTCAATTGTTTTGGTTAGAGTTGCTAATGCTAATTGGTTCTTTCATCGGCTTTTGTGCTTGCAGCATTAGAGGTCTTGGTGGAAAAGAGAATAACTGGTTTTCCTGTTGTTGATGATGATTGGAATCTGGTAGAGTTTTTCCTTTCACCTTTTTGTGCACCTTGCGTGATTTTTTATATTTCCTCTGTCAACTTACTGTGGAAGTGAATTACCTAAGTCTGATGATATTCTTGTGGAAGAGACTGGGGAAGGGGTCTTCTGTTCGTTGTCAGTGTCGCTGAGGATCTTGCAAAAATTATCAACATTATTTTTTCTTTCGTTTTTTGAGGATTTGGGGTGCACTTGTGCATCTATGTTCAAAGCCTTACCCTTAAGCCAGGCCAGGAATTTTGGTCCATTTATGTTAAGGGTACTGCTAGCAAATAATCCAAAGTGCTACTCTTCTTTCTTAATAATTTGGCTTGTGTTTTGCTGTTGCAGGTTGGAGTCGTCTCAGATTATGACTTATTAGCACTTGATTCCATTTCAGGTATTTTCACTTCCCATAGCCCGGGTTTCAACTGAAATCACCATTACACGAGGAATTGTTCTTTGCTTATTTTTCTGTTGAAATCGGATTTCTTTCCTTTTTGATTTGTTAAATTACTAGTACATTTTCTTTCTATTCTTCTTATTTTAATTCCTTAATTTGAGATTCTTCTTCAAATTTGTTTTCTTATTTAGTTTCTAATTGGAAAACATTATTGTAATCACCTATTGGTGCTTGGGGTCTTCTCTTATTTCATTTTATCAATGAAATATTTCTTCTCTAAAAATATTATTTTTGTTATAATCCATTTAAATCATTGCTTCTCTTAATAATATTTCCCCACTATTATTGGCAATTAGGTGGTACTCAGAGTGATACCAATCTGTTTCCTGATGTGGATAGTTCGTGGAAAGTATGTAAGCAGTGCCATTTATCTTCTGGTTATTTGCCCTCTTTTTTCTTTTTCACAAACATGAGGATTTTTAACAAAAGCACCCTCAGAAAACCTGATCAAACCAGCCGAACTGTTTGGATTGGTTTTCAGCTGTGTGAACCCAAATCAGCAGAAAGTTTTGTTTTGTTTTTTGTTTTTTTTTTTAAAACATAATTTTTTTTACTCCAGAATATTGTTCTCGGACCCTTTTGGAAAGTACTCCAAAATATTGTTCGATTGATCTTTGGAGTACTCATTTTCAAAAAATGAAATATTTATTGATACATTGAACTACTGCTGTCAATTTATGGTGTGAAAACTGGTGAATAGATTCTTAAATTATAACACTTCTTTGTGTTACTTACAAAATGTTGAAATAAATAACTTCAGCTTACTATTATTTTTTATTGAAGAAAACTAAGTTCTAAGTCTAACAACCTAACCCAACCAAAATATTACTAAAGACGGATTGGGGTTTTGCTCTCATCTGATCAGGTTTATTTGGTTGGACAAATTGCAACTGAATATTTGTGTTTGGTTCAGAATCTCATCTAACTCAGTCAACTTACTGCATGAACACCTTCAGTAGTTTACATATAGGCGACTTTTCCCGTTTTACTTAGTTTTTCTTTTCTTTATGGTTCCAAAGTCGTTATGTTTAGATTTTCAGTAGAGCCAGACATTAGCTCTAACATTGACAGCACTGGTTTAAGTAAAATCTTTTGGAGAGATAGCTCTGGTATCAACATCACTTGATTAAGTAAATTAATTTGAGAAAGAAGAGTCGCTGAATTTAGCCCTGCCATTGACATCCCTTTATTAAGTAAATTTCATGAAGAAAGAAGAATCACACGATTATCATGACCGTGAATTATGTGGATCGGTGGTTCCCTGCCATTTTTTAATTAAAAAGTGATGGAAGTTTATTTTTTCTGAATATGGTTGCCAGACATTCAATGAGATCCAGAAACTGCTCAGTAAAACAAATGGTAAAGTTGTTGGAGACCTAATGACATCTTCTCCACTAGCTGTTCGTGAAACTTCAAATTTAGAAGATGCTGCCAGGTAATAATTTTATATTTCTATCTTTTGCATTATTTTACCATCTGAATCTACAGAATCCATGGTTTCTCCAATGTTCGACCTGGATATTTAATCAATTATTTTTTTTAAGTATGCAATTTCATTTTATTCTACTTTTTATGTACATTCTTAAAAAATTAAACAAGTAGTTTTTTTTCTGTACTTTTGTAACTGTTAATTCTTAAAGATAGTGTGCAGGTGCCCATGTTATTCCGCGACTTTATTTGATCATCATTTTTCACCACCCTGATTTCTTTGATTGTGGAGTAAAAGATTTACTCATTTTTACTAATTAATCTGTGGGTACCGAGGTTTGAAACTATCGATTGTTTATAGGTTGTTGCTTGAAACAAAATATCGTCGATTGCCGGTAGTCGATGATGATGGCAAGCTGGTAGGAATATTTATTTTTCTATTCTTCTTTAAAGCTCAATAAAATTTAAAATCTCTATCAATCTTAGTTACTTCTGTTTAAATGTTAAAGGTGGGGATCATTACTAGGGGAAATGTTGTTAGAGCTGCTTTGCAAATAAAACGAGCTGCTGAGAGGTCAACATAA ATGAGCTCCATCTCTCTCTCCAATTCACATCCTCTTGCGCGGCCTTATCCTCATCATCTTCCTCACTCTCACCGTCAACAATGGTGTTCCCGCCCTCTGCTTTCGTCCAATTCTCTTTCTAAGCTACACCGGTTTGGGATCTCCGACCGATTCCCCGCTCGACCTCCCTTGCCTTTGGTTCTTGCTTCTTCTGGAGCTGGCGTCGTTGATTCCTTTCCGCTCAGAGGAACATATACGGTTGGTGATTTTATGACGAGAAAGGAGAATCTATATGTTGTTAAACCTACAACAACAGTTGATGAAGCATTAGAGGTCTTGGTGGAAAAGAGAATAACTGGTTTTCCTGTTGTTGATGATGATTGGAATCTGGTTGGAGTCGTCTCAGATTATGACTTATTAGCACTTGATTCCATTTCAGGTGGTACTCAGAGTGATACCAATCTGTTTCCTGATGTGGATAGTTCGTGGAAAACATTCAATGAGATCCAGAAACTGCTCAGTAAAACAAATGGTAAAGTTGTTGGAGACCTAATGACATCTTCTCCACTAGCTGTTCGTGAAACTTCAAATTTAGAAGATGCTGCCAGGTTGTTGCTTGAAACAAAATATCGTCGATTGCCGGTAGTCGATGATGATGGCAAGCTGGTGGGGATCATTACTAGGGGAAATGTTGTTAGAGCTGCTTTGCAAATAAAACGAGCTGCTGAGAGGTCAACATAA ATGAGCTCCATCTCTCTCTCCAATTCACATCCTCTTGCGCGGCCTTATCCTCATCATCTTCCTCACTCTCACCGTCAACAATGGTGTTCCCGCCCTCTGCTTTCGTCCAATTCTCTTTCTAAGCTACACCGGTTTGGGATCTCCGACCGATTCCCCGCTCGACCTCCCTTGCCTTTGGTTCTTGCTTCTTCTGGAGCTGGCGTCGTTGATTCCTTTCCGCTCAGAGGAACATATACGGTTGGTGATTTTATGACGAGAAAGGAGAATCTATATGTTGTTAAACCTACAACAACAGTTGATGAAGCATTAGAGGTCTTGGTGGAAAAGAGAATAACTGGTTTTCCTGTTGTTGATGATGATTGGAATCTGGTTGGAGTCGTCTCAGATTATGACTTATTAGCACTTGATTCCATTTCAGGTGGTACTCAGAGTGATACCAATCTGTTTCCTGATGTGGATAGTTCGTGGAAAACATTCAATGAGATCCAGAAACTGCTCAGTAAAACAAATGGTAAAGTTGTTGGAGACCTAATGACATCTTCTCCACTAGCTGTTCGTGAAACTTCAAATTTAGAAGATGCTGCCAGGTTGTTGCTTGAAACAAAATATCGTCGATTGCCGGTAGTCGATGATGATGGCAAGCTGGTGGGGATCATTACTAGGGGAAATGTTGTTAGAGCTGCTTTGCAAATAAAACGAGCTGCTGAGAGGTCAACATAA MSSISLSNSHPLARPYPHHLPHSHRQQWCSRPLLSSNSLSKLHRFGISDRFPARPPLPLVLASSGAGVVDSFPLRGTYTVGDFMTRKENLYVVKPTTTVDEALEVLVEKRITGFPVVDDDWNLVGVVSDYDLLALDSISGGTQSDTNLFPDVDSSWKTFNEIQKLLSKTNGKVVGDLMTSSPLAVRETSNLEDAARLLLETKYRRLPVVDDDGKLVGIITRGNVVRAALQIKRAAERST* Homology
BLAST of Chy6G115970 vs. ExPASy Swiss-Prot
Match: O23193 (CBS domain-containing protein CBSX1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CBSX1 PE=1 SV=2) HSP 1 Score: 278.1 bits (710), Expect = 9.4e-74 Identity = 136/203 (67.00%), Postives = 171/203 (84.24%), Query Frame = 0
BLAST of Chy6G115970 vs. ExPASy Swiss-Prot
Match: Q9C5D0 (CBS domain-containing protein CBSX2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CBSX2 PE=1 SV=1) HSP 1 Score: 274.2 bits (700), Expect = 1.4e-72 Identity = 155/244 (63.52%), Postives = 185/244 (75.82%), Query Frame = 0
BLAST of Chy6G115970 vs. ExPASy Swiss-Prot
Match: Q58821 (Uncharacterized protein MJ1426 OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) OX=243232 GN=MJ1426 PE=4 SV=1) HSP 1 Score: 68.6 bits (166), Expect = 1.1e-10 Identity = 40/145 (27.59%), Postives = 80/145 (55.17%), Query Frame = 0
BLAST of Chy6G115970 vs. ExPASy Swiss-Prot
Match: O58045 (Inosine-5'-monophosphate dehydrogenase OS=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) OX=70601 GN=guaB PE=1 SV=1) HSP 1 Score: 65.9 bits (159), Expect = 7.3e-10 Identity = 42/138 (30.43%), Postives = 71/138 (51.45%), Query Frame = 0
BLAST of Chy6G115970 vs. ExPASy Swiss-Prot
Match: P42851 (Inosine-5'-monophosphate dehydrogenase OS=Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) OX=186497 GN=guaB PE=3 SV=1) HSP 1 Score: 65.5 bits (158), Expect = 9.6e-10 Identity = 40/138 (28.99%), Postives = 72/138 (52.17%), Query Frame = 0
BLAST of Chy6G115970 vs. ExPASy TrEMBL
Match: A0A0A0L716 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G202220 PE=4 SV=1) HSP 1 Score: 467.2 bits (1201), Expect = 4.0e-128 Identity = 236/239 (98.74%), Postives = 237/239 (99.16%), Query Frame = 0
BLAST of Chy6G115970 vs. ExPASy TrEMBL
Match: A0A5A7T6Y9 (CBS domain-containing protein CBSX1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold832G001350 PE=4 SV=1) HSP 1 Score: 466.1 bits (1198), Expect = 9.0e-128 Identity = 236/239 (98.74%), Postives = 237/239 (99.16%), Query Frame = 0
BLAST of Chy6G115970 vs. ExPASy TrEMBL
Match: A0A1S3C251 (CBS domain-containing protein CBSX1, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103496172 PE=4 SV=1) HSP 1 Score: 466.1 bits (1198), Expect = 9.0e-128 Identity = 236/239 (98.74%), Postives = 237/239 (99.16%), Query Frame = 0
BLAST of Chy6G115970 vs. ExPASy TrEMBL
Match: A0A6J1J9C6 (CBS domain-containing protein CBSX2, chloroplastic-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111482911 PE=4 SV=1) HSP 1 Score: 407.1 bits (1045), Expect = 5.0e-110 Identity = 209/239 (87.45%), Postives = 216/239 (90.38%), Query Frame = 0
BLAST of Chy6G115970 vs. ExPASy TrEMBL
Match: A0A6J1JBB9 (CBS domain-containing protein CBSX2, chloroplastic-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111482911 PE=4 SV=1) HSP 1 Score: 401.0 bits (1029), Expect = 3.6e-108 Identity = 209/244 (85.66%), Postives = 216/244 (88.52%), Query Frame = 0
BLAST of Chy6G115970 vs. NCBI nr
Match: XP_004140707.1 (CBS domain-containing protein CBSX1, chloroplastic [Cucumis sativus] >KGN57513.1 hypothetical protein Csa_010649 [Cucumis sativus]) HSP 1 Score: 468 bits (1203), Expect = 5.59e-166 Identity = 236/239 (98.74%), Postives = 237/239 (99.16%), Query Frame = 0
BLAST of Chy6G115970 vs. NCBI nr
Match: XP_008456144.1 (PREDICTED: CBS domain-containing protein CBSX1, chloroplastic-like [Cucumis melo] >KAA0037139.1 CBS domain-containing protein CBSX1 [Cucumis melo var. makuwa] >TYK13936.1 CBS domain-containing protein CBSX1 [Cucumis melo var. makuwa]) HSP 1 Score: 466 bits (1200), Expect = 1.60e-165 Identity = 236/239 (98.74%), Postives = 237/239 (99.16%), Query Frame = 0
BLAST of Chy6G115970 vs. NCBI nr
Match: XP_038894434.1 (CBS domain-containing protein CBSX2, chloroplastic-like [Benincasa hispida]) HSP 1 Score: 449 bits (1155), Expect = 1.16e-158 Identity = 228/239 (95.40%), Postives = 232/239 (97.07%), Query Frame = 0
BLAST of Chy6G115970 vs. NCBI nr
Match: XP_022984710.1 (CBS domain-containing protein CBSX2, chloroplastic-like isoform X2 [Cucurbita maxima]) HSP 1 Score: 407 bits (1047), Expect = 3.35e-142 Identity = 209/239 (87.45%), Postives = 216/239 (90.38%), Query Frame = 0
BLAST of Chy6G115970 vs. NCBI nr
Match: KAG7014971.1 (CBS domain-containing protein CBSX1, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 404 bits (1037), Expect = 1.12e-140 Identity = 208/239 (87.03%), Postives = 216/239 (90.38%), Query Frame = 0
BLAST of Chy6G115970 vs. TAIR 10
Match: AT4G36910.1 (Cystathionine beta-synthase (CBS) family protein ) HSP 1 Score: 278.1 bits (710), Expect = 6.7e-75 Identity = 136/203 (67.00%), Postives = 171/203 (84.24%), Query Frame = 0
BLAST of Chy6G115970 vs. TAIR 10
Match: AT4G34120.1 (Cystathionine beta-synthase (CBS) family protein ) HSP 1 Score: 274.2 bits (700), Expect = 9.6e-74 Identity = 155/244 (63.52%), Postives = 185/244 (75.82%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
|