Chy6G114860 (gene) Cucumber (hystrix) v1

Overview


Name	Chy6G114860
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	CitMHS domain-containing protein
Location	chrH06: 7066457 .. 7067386 (-)
RNA-Seq Expression	Chy6G114860
Synteny	Chy6G114860

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTTATGACGGTTGATGGATTTAACAAAACTGGATTGCCAAGTGCTTTTTGGAATTTCATGGAGCCGCATGCACAGATTGATCGTGTTTCTGGGACTGTAGTTCTTGCTCTTGTCATACTGTACCTCTCAAACTTGGCTTCAAACGTGCCTACTGGTATTGACTACTTTTCCTCTTACTGTTGCTTGCTTTCCATATTTTACCTCTTCCATTTTCCTCTTCTGAATGTTTATAGCCTTCATAGAATGAAGATTCCAATATAGGGAAGAAACCCTGAACTTTGTTACTTGCATGTTTTTGGTGTTCGATGATTTGAAATGCACAAAATAACCTGTGAAGAAATATCTGATTATTTTGACGATCACTGCATCTGATGTGTACGAGTAAAATTGAGGTTATGAACATATTGACAAAACACAAATTCGTTTTCGTAGTATAAAGCATTGAACGGACCGGAAAAAACCCAGGTTGTTAGCTCAGGATTTCATGATTATCTAGGATAGATAGGTACTAACTCAACAAATTAATATCTTCATTTGATTAAATCTTGAATAAAAAGAGTTAACTACATTATTTTTCTTGATTGTAATTCTCTGGTTCGGTTGACCTGTCAGTCGTTACGAAAGTGCAACTGTATCTTATACTTTTATGTTGTCATATTGTTAGTTCTTCTGCTTGGAGCACGAGTCGCTGCATCAGCTGCTGCAATTTCTCCAACCGAAGAAAAACGGGCATGGCTTCTTTTAGCTTGGATCAGTACTGTAGCTGGAAATCTCTCATTATTAGGGTCAGCTGCCAACTTGATTGTGTGTGAACAGGCTCGTCGCACTCCACAGCTAAGCTACAATTTATCCTTCTGGAATCATCTTAAATTTGGACTTCCCTCAACTCTTATTGTCACAGCCATTGGTATAGTTCTTATAAGATGA

mRNA sequence

ATGTTTATGACGGTTGATGGATTTAACAAAACTGGATTGCCAAGTGCTTTTTGGAATTTCATGGAGCCGCATGCACAGATTGATCGTGTTTCTGGGACTGTAGTTCTTGCTCTTGTCATACTGTACCTCTCAAACTTGGCTTCAAACGTGCCTACTGTTCTTCTGCTTGGAGCACGAGTCGCTGCATCAGCTGCTGCAATTTCTCCAACCGAAGAAAAACGGGCATGGCTTCTTTTAGCTTGGATCAGTACTGTAGCTGGAAATCTCTCATTATTAGGGTCAGCTGCCAACTTGATTGTGTGTGAACAGGCTCGTCGCACTCCACAGCTAAGCTACAATTTATCCTTCTGGAATCATCTTAAATTTGGACTTCCCTCAACTCTTATTGTCACAGCCATTGGTATAGTTCTTATAAGATGA

Coding sequence (CDS)

ATGTTTATGACGGTTGATGGATTTAACAAAACTGGATTGCCAAGTGCTTTTTGGAATTTCATGGAGCCGCATGCACAGATTGATCGTGTTTCTGGGACTGTAGTTCTTGCTCTTGTCATACTGTACCTCTCAAACTTGGCTTCAAACGTGCCTACTGTTCTTCTGCTTGGAGCACGAGTCGCTGCATCAGCTGCTGCAATTTCTCCAACCGAAGAAAAACGGGCATGGCTTCTTTTAGCTTGGATCAGTACTGTAGCTGGAAATCTCTCATTATTAGGGTCAGCTGCCAACTTGATTGTGTGTGAACAGGCTCGTCGCACTCCACAGCTAAGCTACAATTTATCCTTCTGGAATCATCTTAAATTTGGACTTCCCTCAACTCTTATTGTCACAGCCATTGGTATAGTTCTTATAAGATGA

Protein sequence

MFMTVDGFNKTGLPSAFWNFMEPHAQIDRVSGTVVLALVILYLSNLASNVPTVLLLGARVAASAAAISPTEEKRAWLLLAWISTVAGNLSLLGSAANLIVCEQARRTPQLSYNLSFWNHLKFGLPSTLIVTAIGIVLIR*

Homology

[Close]

BLAST of Chy6G114860 vs. ExPASy Swiss-Prot
Match: Q9AV23 (Silicon efflux transporter LSI3 OS=Oryza sativa subsp. japonica OX=39947 GN=LSI3 PE=2 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 2.1e-49
Identity = 98/138 (71.01%), Postives = 117/138 (84.78%), Query Frame = 0


Query: 1   MFMTVDGFNKTGLPSAFWNFMEPHAQIDRVSGTVVLALVILYLSNLASNVPTVLLLGARV 60
           MF+TV GFNKTGLP A WN M P+++I+ V+G  VL+++IL LSNLASNVPTVLL+G  V
Sbjct: 343 MFVTVSGFNKTGLPGAIWNVMAPYSKINHVTGVTVLSVIILLLSNLASNVPTVLLMGDEV 402

Query: 61  AASAAAISPTEEKRAWLLLAWISTVAGNLSLLGSAANLIVCEQARRTPQLSYNLSFWNHL 120
           AA+AA ISP    R+WLLLAW+STVAGNLSLLGSAANLIVCEQARR  + +Y+L+FWNH+
Sbjct: 403 AAAAATISPAAVTRSWLLLAWVSTVAGNLSLLGSAANLIVCEQARRATRNAYDLTFWNHV 462

Query: 121 KFGLPSTLIVTAIGIVLI 139
            FGLPSTL+VTAIGI LI
Sbjct: 463 IFGLPSTLVVTAIGIPLI 480

[Close]

BLAST of Chy6G114860 vs. ExPASy Swiss-Prot
Match: Q10SY9 (Silicon efflux transporter LSI2 OS=Oryza sativa subsp. japonica OX=39947 GN=LSI2 PE=1 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 1.2e-47
Identity = 94/138 (68.12%), Postives = 115/138 (83.33%), Query Frame = 0


Query: 1   MFMTVDGFNKTGLPSAFWNFMEPHAQIDRVSGTVVLALVILYLSNLASNVPTVLLLGARV 60
           MF+TV GFNKTGLP A W+FM P+++++ V G  VL+++IL LSNLASNVPTVLL+G  V
Sbjct: 332 MFITVSGFNKTGLPGAIWDFMAPYSKVNSVGGISVLSVIILLLSNLASNVPTVLLMGDEV 391

Query: 61  AASAAAISPTEEKRAWLLLAWISTVAGNLSLLGSAANLIVCEQARRTPQLSYNLSFWNHL 120
           A +AA ISP     +WLLLAW+STVAGNLSLLGSAANLIVCEQARR P+ +Y+L+FW H+
Sbjct: 392 AKAAALISPAAVTTSWLLLAWVSTVAGNLSLLGSAANLIVCEQARRAPRNAYDLTFWQHI 451

Query: 121 KFGLPSTLIVTAIGIVLI 139
            FG+PSTLIVTA+GI LI
Sbjct: 452 VFGVPSTLIVTAVGIPLI 469

[Close]

BLAST of Chy6G114860 vs. ExPASy Swiss-Prot
Match: Q54GU0 (Putative transporter arsB OS=Dictyostelium discoideum OX=44689 GN=arsB PE=2 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 1.4e-16
Identity = 54/142 (38.03%), Postives = 84/142 (59.15%), Query Frame = 0


Query: 1   MFMTVDGFNKTGLPSAFWNFMEPHAQID----RVSGTVVLALVILYLSNLASNVPTVLLL 60
           +F+ V+GF++     A W  +EP   ID     V    + +++IL L N+  NVP VL L
Sbjct: 428 LFVLVEGFDRQFEKEA-WTILEPFVPIDSTHLNVLKIFIFSILILVLCNILGNVPLVLSL 487

Query: 61  GARVAASAAAISPTEEKRAWLLLAWISTVAGNLSLLGSAANLIVCEQARRTPQLSYNLSF 120
             R+  + A          W+LLA++STVAGNL+L+GS ANLIV E+++      + + F
Sbjct: 488 SPRLLEALA------PDFTWILLAFVSTVAGNLTLVGSVANLIVAEKSKS----YHEIGF 547

Query: 121 WNHLKFGLPSTLIVTAIGIVLI 139
             +LKFG+PST++V  IG+ ++
Sbjct: 548 LEYLKFGVPSTILVILIGVPIV 558

[Close]

BLAST of Chy6G114860 vs. ExPASy TrEMBL
Match: A0A1L7B7J1 (LSi2 OS=Cucumis sativus var. sativus OX=869827 GN=LSi2 PE=2 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 2.7e-68
Identity = 137/139 (98.56%), Postives = 139/139 (100.00%), Query Frame = 0


Query: 1   MFMTVDGFNKTGLPSAFWNFMEPHAQIDRVSGTVVLALVILYLSNLASNVPTVLLLGARV 60
           MFMTVDGFNKTGLPSAFWNFMEPHAQIDRVSGTVVLALVILYLSNLASNVPTVLLLGARV
Sbjct: 409 MFMTVDGFNKTGLPSAFWNFMEPHAQIDRVSGTVVLALVILYLSNLASNVPTVLLLGARV 468

Query: 61  AASAAAISPTEEKRAWLLLAWISTVAGNLSLLGSAANLIVCEQARRTPQLSYNLSFWNHL 120
           AASAAAISPTEEKRAWLLLAWISTVAGNLSLLGSAANLIVCEQARRTPQLSYNLSFWNHL
Sbjct: 469 AASAAAISPTEEKRAWLLLAWISTVAGNLSLLGSAANLIVCEQARRTPQLSYNLSFWNHL 528

Query: 121 KFGLPSTLIVTAIGIVLIR 140
           KFGLPSTLIVTAIG+VLI+
Sbjct: 529 KFGLPSTLIVTAIGLVLIK 547

[Close]

BLAST of Chy6G114860 vs. ExPASy TrEMBL
Match: A0A0A0L6L7 (CitMHS domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G182780 PE=4 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 2.7e-68
Identity = 137/139 (98.56%), Postives = 139/139 (100.00%), Query Frame = 0


Query: 1   MFMTVDGFNKTGLPSAFWNFMEPHAQIDRVSGTVVLALVILYLSNLASNVPTVLLLGARV 60
           MFMTVDGFNKTGLPSAFWNFMEPHAQIDRVSGTVVLALVILYLSNLASNVPTVLLLGARV
Sbjct: 409 MFMTVDGFNKTGLPSAFWNFMEPHAQIDRVSGTVVLALVILYLSNLASNVPTVLLLGARV 468

Query: 61  AASAAAISPTEEKRAWLLLAWISTVAGNLSLLGSAANLIVCEQARRTPQLSYNLSFWNHL 120
           AASAAAISPTEEKRAWLLLAWISTVAGNLSLLGSAANLIVCEQARRTPQLSYNLSFWNHL
Sbjct: 469 AASAAAISPTEEKRAWLLLAWISTVAGNLSLLGSAANLIVCEQARRTPQLSYNLSFWNHL 528

Query: 121 KFGLPSTLIVTAIGIVLIR 140
           KFGLPSTLIVTAIG+VLI+
Sbjct: 529 KFGLPSTLIVTAIGLVLIK 547

[Close]

BLAST of Chy6G114860 vs. ExPASy TrEMBL
Match: A0A1S4DT02 (putative transporter arsB OS=Cucumis melo OX=3656 GN=LOC103484097 PE=4 SV=1)

HSP 1 Score: 266.9 bits (681), Expect = 4.7e-68
Identity = 137/139 (98.56%), Postives = 138/139 (99.28%), Query Frame = 0


Query: 1   MFMTVDGFNKTGLPSAFWNFMEPHAQIDRVSGTVVLALVILYLSNLASNVPTVLLLGARV 60
           MFMTVDGFNKTGLPSAFWNFMEPHAQIDRVSGTVVLALVILYLSNLASNVPTVLLLGARV
Sbjct: 408 MFMTVDGFNKTGLPSAFWNFMEPHAQIDRVSGTVVLALVILYLSNLASNVPTVLLLGARV 467

Query: 61  AASAAAISPTEEKRAWLLLAWISTVAGNLSLLGSAANLIVCEQARRTPQLSYNLSFWNHL 120
           AASAAAISP EEKRAWLLLAWISTVAGNLSLLGSAANLIVCEQARRTPQLSYNLSFWNHL
Sbjct: 468 AASAAAISPAEEKRAWLLLAWISTVAGNLSLLGSAANLIVCEQARRTPQLSYNLSFWNHL 527

Query: 121 KFGLPSTLIVTAIGIVLIR 140
           KFGLPSTLIVTAIG+VLIR
Sbjct: 528 KFGLPSTLIVTAIGLVLIR 546

[Close]

BLAST of Chy6G114860 vs. ExPASy TrEMBL
Match: A0A5D3DH83 (Putative transporter arsB OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold386G00790 PE=4 SV=1)

HSP 1 Score: 266.9 bits (681), Expect = 4.7e-68
Identity = 137/139 (98.56%), Postives = 138/139 (99.28%), Query Frame = 0


Query: 1   MFMTVDGFNKTGLPSAFWNFMEPHAQIDRVSGTVVLALVILYLSNLASNVPTVLLLGARV 60
           MFMTVDGFNKTGLPSAFWNFMEPHAQIDRVSGTVVLALVILYLSNLASNVPTVLLLGARV
Sbjct: 408 MFMTVDGFNKTGLPSAFWNFMEPHAQIDRVSGTVVLALVILYLSNLASNVPTVLLLGARV 467

Query: 61  AASAAAISPTEEKRAWLLLAWISTVAGNLSLLGSAANLIVCEQARRTPQLSYNLSFWNHL 120
           AASAAAISP EEKRAWLLLAWISTVAGNLSLLGSAANLIVCEQARRTPQLSYNLSFWNHL
Sbjct: 468 AASAAAISPAEEKRAWLLLAWISTVAGNLSLLGSAANLIVCEQARRTPQLSYNLSFWNHL 527

Query: 121 KFGLPSTLIVTAIGIVLIR 140
           KFGLPSTLIVTAIG+VLIR
Sbjct: 528 KFGLPSTLIVTAIGLVLIR 546

[Close]

BLAST of Chy6G114860 vs. ExPASy TrEMBL
Match: F1SX53 (Silicon efflux transporter CmLsi2-2 OS=Cucurbita moschata OX=3662 GN=CmLsi2-2 PE=2 SV=1)

HSP 1 Score: 262.3 bits (669), Expect = 1.1e-66
Identity = 134/139 (96.40%), Postives = 138/139 (99.28%), Query Frame = 0


Query: 1   MFMTVDGFNKTGLPSAFWNFMEPHAQIDRVSGTVVLALVILYLSNLASNVPTVLLLGARV 60
           MFMTVDGFNKTGLPSAFW+FMEPHAQIDRVSGTVVLALVILYLSNLASNVPTVLLLGARV
Sbjct: 391 MFMTVDGFNKTGLPSAFWDFMEPHAQIDRVSGTVVLALVILYLSNLASNVPTVLLLGARV 450

Query: 61  AASAAAISPTEEKRAWLLLAWISTVAGNLSLLGSAANLIVCEQARRTPQLSYNLSFWNHL 120
           AASAAAISP EEKRAWLLLAWISTVAGNLSLLGSAANLIVCEQARRTPQLSYNLSFWNHL
Sbjct: 451 AASAAAISPMEEKRAWLLLAWISTVAGNLSLLGSAANLIVCEQARRTPQLSYNLSFWNHL 510

Query: 121 KFGLPSTLIVTAIGIVLIR 140
           KFG+PSTLIVTAIG+VLI+
Sbjct: 511 KFGVPSTLIVTAIGLVLIK 529

[Close]

BLAST of Chy6G114860 vs. NCBI nr
Match: XP_004140769.1 (silicon efflux transporter LSI3 [Cucumis sativus] >XP_011651172.1 silicon efflux transporter LSI3 [Cucumis sativus] >XP_011651173.1 silicon efflux transporter LSI3 [Cucumis sativus] >XP_031738919.1 silicon efflux transporter LSI3 [Cucumis sativus] >APT69295.1 LSi2 [Cucumis sativus var. sativus] >KGN57393.1 hypothetical protein Csa_011781 [Cucumis sativus])

HSP 1 Score: 265 bits (676), Expect = 1.61e-83
Identity = 137/139 (98.56%), Postives = 139/139 (100.00%), Query Frame = 0


Query: 1   MFMTVDGFNKTGLPSAFWNFMEPHAQIDRVSGTVVLALVILYLSNLASNVPTVLLLGARV 60
           MFMTVDGFNKTGLPSAFWNFMEPHAQIDRVSGTVVLALVILYLSNLASNVPTVLLLGARV
Sbjct: 409 MFMTVDGFNKTGLPSAFWNFMEPHAQIDRVSGTVVLALVILYLSNLASNVPTVLLLGARV 468

Query: 61  AASAAAISPTEEKRAWLLLAWISTVAGNLSLLGSAANLIVCEQARRTPQLSYNLSFWNHL 120
           AASAAAISPTEEKRAWLLLAWISTVAGNLSLLGSAANLIVCEQARRTPQLSYNLSFWNHL
Sbjct: 469 AASAAAISPTEEKRAWLLLAWISTVAGNLSLLGSAANLIVCEQARRTPQLSYNLSFWNHL 528

Query: 121 KFGLPSTLIVTAIGIVLIR 139
           KFGLPSTLIVTAIG+VLI+
Sbjct: 529 KFGLPSTLIVTAIGLVLIK 547

[Close]

BLAST of Chy6G114860 vs. NCBI nr
Match: XP_016899111.1 (PREDICTED: putative transporter arsB [Cucumis melo] >XP_016899112.1 PREDICTED: putative transporter arsB [Cucumis melo] >XP_016899113.1 PREDICTED: putative transporter arsB [Cucumis melo] >XP_016899114.1 PREDICTED: putative transporter arsB [Cucumis melo] >KAA0033676.1 putative transporter arsB [Cucumis melo var. makuwa] >TYK22974.1 putative transporter arsB [Cucumis melo var. makuwa])

HSP 1 Score: 264 bits (674), Expect = 3.13e-83
Identity = 137/139 (98.56%), Postives = 138/139 (99.28%), Query Frame = 0


Query: 1   MFMTVDGFNKTGLPSAFWNFMEPHAQIDRVSGTVVLALVILYLSNLASNVPTVLLLGARV 60
           MFMTVDGFNKTGLPSAFWNFMEPHAQIDRVSGTVVLALVILYLSNLASNVPTVLLLGARV
Sbjct: 408 MFMTVDGFNKTGLPSAFWNFMEPHAQIDRVSGTVVLALVILYLSNLASNVPTVLLLGARV 467

Query: 61  AASAAAISPTEEKRAWLLLAWISTVAGNLSLLGSAANLIVCEQARRTPQLSYNLSFWNHL 120
           AASAAAISP EEKRAWLLLAWISTVAGNLSLLGSAANLIVCEQARRTPQLSYNLSFWNHL
Sbjct: 468 AASAAAISPAEEKRAWLLLAWISTVAGNLSLLGSAANLIVCEQARRTPQLSYNLSFWNHL 527

Query: 121 KFGLPSTLIVTAIGIVLIR 139
           KFGLPSTLIVTAIG+VLIR
Sbjct: 528 KFGLPSTLIVTAIGLVLIR 546

[Close]

BLAST of Chy6G114860 vs. NCBI nr
Match: XP_038903236.1 (silicon efflux transporter LSI2 [Benincasa hispida] >XP_038903243.1 silicon efflux transporter LSI2 [Benincasa hispida] >XP_038903252.1 silicon efflux transporter LSI2 [Benincasa hispida])

HSP 1 Score: 261 bits (668), Expect = 2.47e-82
Identity = 136/139 (97.84%), Postives = 138/139 (99.28%), Query Frame = 0


Query: 1   MFMTVDGFNKTGLPSAFWNFMEPHAQIDRVSGTVVLALVILYLSNLASNVPTVLLLGARV 60
           MFMTVDGFNKTGLPSAFWNFMEPHAQIDRVSGTVVLALVILYLSNLASNVPTVLLLGARV
Sbjct: 408 MFMTVDGFNKTGLPSAFWNFMEPHAQIDRVSGTVVLALVILYLSNLASNVPTVLLLGARV 467

Query: 61  AASAAAISPTEEKRAWLLLAWISTVAGNLSLLGSAANLIVCEQARRTPQLSYNLSFWNHL 120
           AASAAAIS TEEKRAWLLLAWISTVAGNLSLLGSAANLIVCEQARRTPQLSYNLSFWNHL
Sbjct: 468 AASAAAISATEEKRAWLLLAWISTVAGNLSLLGSAANLIVCEQARRTPQLSYNLSFWNHL 527

Query: 121 KFGLPSTLIVTAIGIVLIR 139
           KFG+PSTLIVTAIG+VLIR
Sbjct: 528 KFGVPSTLIVTAIGLVLIR 546

[Close]

BLAST of Chy6G114860 vs. NCBI nr
Match: XP_022922998.1 (silicon efflux transporter LSI2-like [Cucurbita moschata] >XP_022922999.1 silicon efflux transporter LSI2-like [Cucurbita moschata] >BAK09178.1 silicon efflux transporter CmLsi2-2 [Cucurbita moschata])

HSP 1 Score: 259 bits (662), Expect = 1.28e-81
Identity = 134/139 (96.40%), Postives = 138/139 (99.28%), Query Frame = 0


Query: 1   MFMTVDGFNKTGLPSAFWNFMEPHAQIDRVSGTVVLALVILYLSNLASNVPTVLLLGARV 60
           MFMTVDGFNKTGLPSAFW+FMEPHAQIDRVSGTVVLALVILYLSNLASNVPTVLLLGARV
Sbjct: 391 MFMTVDGFNKTGLPSAFWDFMEPHAQIDRVSGTVVLALVILYLSNLASNVPTVLLLGARV 450

Query: 61  AASAAAISPTEEKRAWLLLAWISTVAGNLSLLGSAANLIVCEQARRTPQLSYNLSFWNHL 120
           AASAAAISP EEKRAWLLLAWISTVAGNLSLLGSAANLIVCEQARRTPQLSYNLSFWNHL
Sbjct: 451 AASAAAISPMEEKRAWLLLAWISTVAGNLSLLGSAANLIVCEQARRTPQLSYNLSFWNHL 510

Query: 121 KFGLPSTLIVTAIGIVLIR 139
           KFG+PSTLIVTAIG+VLI+
Sbjct: 511 KFGVPSTLIVTAIGLVLIK 529

[Close]

BLAST of Chy6G114860 vs. NCBI nr
Match: XP_023552419.1 (silicon efflux transporter LSI2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 259 bits (662), Expect = 1.28e-81
Identity = 134/139 (96.40%), Postives = 138/139 (99.28%), Query Frame = 0


Query: 1   MFMTVDGFNKTGLPSAFWNFMEPHAQIDRVSGTVVLALVILYLSNLASNVPTVLLLGARV 60
           MFMTVDGFNKTGLPSAFW+FMEPHAQIDRVSG VVLALVILYLSNLASNVPTVLLLGARV
Sbjct: 391 MFMTVDGFNKTGLPSAFWDFMEPHAQIDRVSGIVVLALVILYLSNLASNVPTVLLLGARV 450

Query: 61  AASAAAISPTEEKRAWLLLAWISTVAGNLSLLGSAANLIVCEQARRTPQLSYNLSFWNHL 120
           AASAAAISPTEEKRAWLLLAWISTVAGNLSLLGSAANLIVCEQARRTPQLSYNLSFWNHL
Sbjct: 451 AASAAAISPTEEKRAWLLLAWISTVAGNLSLLGSAANLIVCEQARRTPQLSYNLSFWNHL 510

Query: 121 KFGLPSTLIVTAIGIVLIR 139
           KFG+PSTLIVTAIG+VLI+
Sbjct: 511 KFGVPSTLIVTAIGLVLIK 529

[Close]

BLAST of Chy6G114860 vs. TAIR 10
Match: AT1G02260.1 (Divalent ion symporter )

HSP 1 Score: 195.3 bits (495), Expect = 3.3e-50
Identity = 101/139 (72.66%), Postives = 117/139 (84.17%), Query Frame = 0


Query: 1   MFMTVDGFNKTGLPSAFWNFMEPHAQIDRVSGTVVLALVILYLSNLASNVPTVLLLGARV 60
           MF+TVDGFNKTG+P+A W+ MEP+A+ID+  G  VLA+VIL LSN+ASNVPTVLLLGARV
Sbjct: 366 MFITVDGFNKTGIPTALWDLMEPYAKIDQAKGIAVLAVVILVLSNVASNVPTVLLLGARV 425

Query: 61  AASAAAISPTEEKRAWLLLAWISTVAGNLSLLGSAANLIVCEQARRTPQLSYNLSFWNHL 120
           AAS  A+   EEK+AWLLLAW+STVAGNL+LLGSAANLIVCEQARR     Y L+F  H 
Sbjct: 426 AAS--AMGREEEKKAWLLLAWVSTVAGNLTLLGSAANLIVCEQARRAVSHGYTLTFTKHF 485

Query: 121 KFGLPSTLIVTAIGIVLIR 140
           KFGLPSTLIVTAIG+ LI+
Sbjct: 486 KFGLPSTLIVTAIGLFLIK 502

The following BLAST results are available for this feature:

BLAST of Chy6G114860 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9AV23	2.1e-49	71.01	Silicon efflux transporter LSI3 OS=Oryza sativa subsp. japonica OX=39947 GN=LSI3...	[more]
Q10SY9	1.2e-47	68.12	Silicon efflux transporter LSI2 OS=Oryza sativa subsp. japonica OX=39947 GN=LSI2...	[more]
Q54GU0	1.4e-16	38.03	Putative transporter arsB OS=Dictyostelium discoideum OX=44689 GN=arsB PE=2 SV=1	[more]

BLAST of Chy6G114860 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1L7B7J1	2.7e-68	98.56	LSi2 OS=Cucumis sativus var. sativus OX=869827 GN=LSi2 PE=2 SV=1	[more]
A0A0A0L6L7	2.7e-68	98.56	CitMHS domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G182780 PE=4...	[more]
A0A1S4DT02	4.7e-68	98.56	putative transporter arsB OS=Cucumis melo OX=3656 GN=LOC103484097 PE=4 SV=1	[more]
A0A5D3DH83	4.7e-68	98.56	Putative transporter arsB OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
F1SX53	1.1e-66	96.40	Silicon efflux transporter CmLsi2-2 OS=Cucurbita moschata OX=3662 GN=CmLsi2-2 PE...	[more]

BLAST of Chy6G114860 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004140769.1	1.61e-83	98.56	silicon efflux transporter LSI3 [Cucumis sativus] >XP_011651172.1 silicon efflux...	[more]
XP_016899111.1	3.13e-83	98.56	PREDICTED: putative transporter arsB [Cucumis melo] >XP_016899112.1 PREDICTED: p...	[more]
XP_038903236.1	2.47e-82	97.84	silicon efflux transporter LSI2 [Benincasa hispida] >XP_038903243.1 silicon effl...	[more]
XP_022922998.1	1.28e-81	96.40	silicon efflux transporter LSI2-like [Cucurbita moschata] >XP_022922999.1 silico...	[more]
XP_023552419.1	1.28e-81	96.40	silicon efflux transporter LSI2-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Chy6G114860 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G02260.1	3.3e-50	72.66	Divalent ion symporter	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004680	Citrate transporter-like domain	PFAM	PF03600	CitMHS	coord: 1..86 e-value: 3.3E-8 score: 33.1
None	No IPR available	PANTHER	PTHR43302:SF3	OS10G0447900 PROTEIN	coord: 1..138
None	No IPR available	PANTHER	PTHR43302	TRANSPORTER ARSB-RELATED	coord: 1..138

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy6G114860.1	Chy6G114860.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0016021	integral component of membrane