Chy6G114020 (gene) Cucumber (hystrix) v1

Overview


Name	Chy6G114020
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Unknown protein
Location	chrH06: 6314146 .. 6315271 (+)
RNA-Seq Expression	Chy6G114020
Synteny	Chy6G114020

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GACAGATCTGGCAAGAGGAAGACAAAAATCCACGACAAAGAGGAGGACTGAAACCCACGGTAAAGAGGAAGAAAAAATTCACGGCTAAACACACAAATCTGTCAAAAACCTACAAATTCGGCGAAAACCCAGAACGAAAACACAATTCAAGCAAAGAGGAAGAGGAAAACCCATATCCAGCGAAGAGGAATGCGTCGTGTAGAGGAAGACGGTGAGAGACGAAGATCAAGAAGACAATGAAGACGATGACAGGAAGAGGAAGATGATGGTTATTTGGAAAAGACGATGGAGATAAGAGGAAGAAAAAGGAAACCATGTGAGAGTGGTTATTTGGGGAAGAAAATGGAAATAAGAGGAAGAAAAAGAAAATCACGAGAGGAAAATGAAATAGAAAAATAATTGAAAAAAGGAAAAGGAAACCAATAAAAAGAATTGAGAAAAAGGAAAAGAAAATCAATAAAAAAGAATTTGAGAAAAAGGAAACTAATAGAAATAATTGAGAAAAAAGAAAAAGAAACAAATATAAATAATTGAGAAACAAGAACGGGAGAAACTACGGGCCCGTTTAGTAACGTTCTCGTTTCCTGTTCCCTGTTTCCAGTTTTCCGTTCCTTATTTTTTTAAAACAAGAAACAGAAATGTGTTCAGTAACTGTTTCTATTTCTTGTTTCTTGAAAAATAGAAACAGAAATAGAAAATGTGTTTGATAACTGTTTCTTGTTTCCTGATTTTCTTTGAAATTTATTTTTTTATTTTATTCACATTTAATTCAATTAAACACCAAACAAAAATATATGTCCTCCATTAAACATAAAAAAAATTATCAAACCTAGATAGGAAGGTCTTCTTGTAATCTTATGGAGAACGAGATAAAGATTGAGATCTGAAGAACAGAGCCGGCGAGAGGAAGACGAAAACCCACGACGAAGAGGAGGACTGAAATCCACGGAAAAGAGGAAGACAAAAACTCACAACTAAAACACGGATTTGACAAAAACTCGTAAATTTGGCGAAAACCCACAGCGAAAAAATAATTCACGTAAAGAGGGAAAGGAAAACCCAGATCCAGCGAAGAGGAAGGCGTCATGTATATGAAAGACGATGAGGGGCGAAGAGGAAGACAATG

mRNA sequence

GACAGATCTGGCAAGAGGAAGACAAAAATCCACGACAAAGAGGAGGACTGAAACCCACGGTAAAGAGGAAGAAAAAATTCACGGCTAAACACACAAATCTGTCAAAAACCTACAAATTCGGCGAAAACCCAGAACGAAAACACAATTCAAGCAAAGAGGAAGAGGAAAACCCATATCCAGCGAAGAGGAATGCGTCGTGTAGAGGAAGACGACGATGAGGGGCGAAGAGGAAGACAATG

Coding sequence (CDS)

GACAGATCTGGCAAGAGGAAGACAAAAATCCACGACAAAGAGGAGGACTGAAACCCACGGTAAAGAGGAAGAAAAAATTCACGGCTAAACACACAAATCTGTCAAAAACCTACAAATTCGGCGAAAACCCAGAACGAAAACACAATTCAAGCAAAGAGGAAGAGGAAAACCCATATCCAGCGAAGAGGAATGCGTCGTGTAGAGGAAGACGACGATGAGGGGCGAAGAGGAAGACAATG

Protein sequence

DRSGKRKTKIHDKEED*NPR*RGRKNSRLNTQICQKPTNSAKTQNENTIQAKRKRKTHIQRRGMRRVEEDDDEGRRGRQX

Homology

The following BLAST results are available for this feature:

BLAST of Chy6G114020 vs.


Match Name	E-value	Identity	Description

BLAST of Chy6G114020 vs.


Match Name	E-value	Identity	Description

BLAST of Chy6G114020 vs.


Match Name	E-value	Identity	Description

BLAST of Chy6G114020 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 24..45
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 60..77
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..23
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..77

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy6G114020.1	Chy6G114020.1	mRNA