Chy6G113240 (gene) Cucumber (hystrix) v1

Overview
NameChy6G113240
Typegene
OrganismCucumis hystrix (Cucumber (hystrix) v1)
Descriptionchromatin structure-remodeling complex protein BSH
LocationchrH06: 5573976 .. 5578238 (+)
RNA-Seq ExpressionChy6G113240
SyntenyChy6G113240
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAGCTTCCGCCTCGCCTCATTCAAAAGCTCCATTCAAGTTCAGGATGTGAGTTCTTTCTCTCTTTCAACTCCATCTATCAATTCTTCTTCTTTTCATTTATTTCTCTCTCTTTATGTTTTCAATCTCTATCGAAGTCCGACGGCGGAGAATCTAGTCCCAATTCGTTTGGACATTGAAATTGACGGTCAGAGGTTCAAAGATGCTTTCACTTGGAACCCTTCTGGTAATTCATTACCTTGCTCCTACTTCTTATGTTTTTTCTTTTTTTCTTTTAAAGCAATGTTGATCCATGTGTAGGAGAATACTTTATGCTTTTGATTTTTGAGTTTAGGGTTTTCTTTTTTCTCCCCAAACATATGCTTTCTGACATGGAAAAACTGAATTAATCACTTGCCCTTGCCCGCTGTGTTGCTGATACTATAATGAAAGACTTTGCGAATTGAATTAACCCTCCATTGTGCTTATTCGTTTTGGTACAGTATTTAGGCCTCAAATCGGTGTTTTTGAAAGTGCTTAAATGGCACACTAAAAGAACTTATAAGTGTGAGGCCTAAATTTGTTCTCTAGTAAAATTAAAGTTAGATTAGATTACATGTTTGGTCTATGAACTTTTAGGTTTGTCTTTTGTGTGTAGTAGAAACTTAACCATAAACTTAAAAAAGTACTTGACAAATTTTTTACCTTTCGATTTTCTTTGAAATATAGGTTTATGATTGAATTTTTTTTAAAAAAATTTATAATTCACGGATCTAGTAAACGAAAAATTGAGTTTTATGTCTTACAGGCCATCAGATGTTCAATTTTGTATACAATAGTGATGTGAATTTTGAATAATGTAATAAAAGTCATAGGACCTCTTAGATATGAACTTAGAAGCTCAAGGACTTGGTAGACAAAAAATTGAAAGTTTTGAAACCTATTAGATATTTTTGAAAGTTTAGAGATTAAACGTGTAACTTTAAACTCGTACATATAAAGTAGTATTATGAATGATAAGATATTGAAAAATTTAAGAAATTAGAGTTCTTTTTTGGTTAAGAGATAAGAGTTGTGGAGAAAAATAAATATTTTCTTAAAGAATATCTGTTAGTTTCTTCTTCTTTGAAGGATTTAAAACGAAATTAAAAACAACGATCTTCATGCATTGTGGGGCCTGGGCGTTCTTCATTAATATTTAATGGTGTCTCGCTTGAAGCGCCTAGGATTTTTAAGCCACTGCTTGAAATAATATTTCTGTAGGTATAAGAATTAACCACATCCGCCATTATTTTCATAGCCGGGCCACCAATCTTCAAAGTGGCTTCGTCCAAAGACAACATGAGTTCTTAAGGTCCCGTTTTATAACAATTGTTTTTTTAATTTTGAAAATTGTACTTGTTTCTCACAACTTCTATACATAGTCATCATCTTTCTTTAAGAAAATATTTGAAGTCTTAACCAGATTCCAAAAACAAAAACAAGTTTTTAAGGAACTACCTTTCTTAAAACTTGGAAGTAGATAACAAAACAAAAAAACTCATAGGTGAAAGTAGTGTTTATTTATTTAATTTAGAAAACGAAATACGAAATGGTTATCAAACATGGCCTAAGTTTTTTTACCATGGGAGCTTGAGTCTAGGAGTTCAGAGGTTATCTTAGTACATTCCAAAACCATAGGCACCCTTGAGGCTTAGATTGAAAATGCATTTTTTGCACTTTTAATAATATATTCAATATCATCATCATAATTTATGTTTATTCTAGATCCCGATTCAGAGGTGGTGGTCTTTGCAAAGAGGACGGTGAAAGATTTAAAACTTCCTCCGGCATTTATAACACAAATTGCACAATCCATTCAAGTAAGGACAATAGTCATCCGAACCTCCCTCTCTCATTCTTCATGGATTTGAATGGTCAGCGTCAGCCTAAACCATGTTTCCTTTACATATTAAAAACAAAACAATGAAGTCTTGGAGAAGTGTTGAACAAAACACTGAAATCTTTGTTCTTTTTATTAATATTTCTGAATTAAAAAACAACAGCTTAAACTTTAGCTTTATACTAAGGATAGTCATAAGGGCATTAGGTGACTTATTACCTTTACAACTGGTTGACCAAAACTGGAAATTACTACATTTCAGCTGCAACTTGAAGACTTAAAGTTCAGTCAGCTAACTAATATTAACCAGTACAGATGCTAACTAAATACATCAAATTCCCTCCTCCTAATAAAACTCGTCCTTGAGTTTTACGCTGAAATTTGCAGCTGGTCGGGTGGAAAATATTCAAAGATATCGGCTATGTTGAAGATAGGATTGATGTGTATGTGATCCGGTAAATCAATCTTGTATGCATTGTCCCCGAATTTCTTTACTATTCGATAAGGTTTTATCTTTTTTGGCTGTAATTTACTGTATTTTCCAGCTGGAAGTCTTGCCTTTCGAAGGTATATCACGACTAGATCTTCTTCTTTAATTTCTTTGAATCTTTTACGTTTGTGGGCTTGTTATAGCCTTCATTCATCTACTCTAGTTGATATGCTACATTTTTGTGCAATTTTGCTATCCTTTCCACCATGTTCTCGGCTTTCATGCTAAGATCAACATTAGAAGTAATATTAGCAAGCTCATAAATTAATCTAGGTAATTTAGTGTAAACAATCTCAAATGGTGACTTCCCTGTTGATCTATTCTTCATATGATTGTAGGTGAACTTGGCTTGTGCTAAGATGAGGTCTCATTGTTTAGGTTTGTCTCCCCCGATTCATCTTATGAGGTTGGCTAGGGTTCTATTGGTGACTTTGGTTTGACCATACCCCTTTTGAGTTCTTGGAAGGCCTAGGATGTGAGTTGTAGGTTGGTTAATCGGGATGTGACTAAGGCGTTCACACCCACTTCTAATTGGCAAGCCACTTGTTCCAATGTGAGTTGTAGGTTGGTTAATCGGGCATTCATCTCTCCCACTGCCACTTCAACGGCCAACAGTCATGTGGTTGAAGTCCTCGGGGAAAGAGTCTCTGGCTCCAAGGGTTGCTCGTTGACACCCTTTCCTTTATTGGCGTTGGTTGGGTTCCTTCCCGCCATGAGTCCCTTCTTCAAGAGCTCTGATACTGAGTTGATGAAGTCTTGGAGAAGTGTTGGAACAAAACACTGAAATCTTTAATTTCTTAGTAATATTTCTGAATTAAAAAATAACAGCCTAAACTTTAGCGTTTATACTAAGGATAGTCATAAGGGCAGTAGGTGACTTATCACCTTTACAACCGGCTGGCCAAAGCTAGAAATTATTAACTCCAGCAGCAACTTAAAGACTTAAAGCACAGTCAGCTAACCAATATTAACCAATACAGATGCTAACTAAATACATTACAAAACCTTCAAACTCAAATCAATACCATTAATCAAATCTTGATCTGCCATCAAATTCACTCATATATTCTCTTTGGTTTTTGCTTATCAGTCACAACTTACAGAATTTCGATCCTTTGAAGGTCAAGATATGTATACTGGTGAAAAAATCATTCCAATCAAGGTTTGTCTTGTTGGCGTTTTGGTATCAATCTCTTGATTACTTCCTCCCTTTATCATTATTCTACAGCTTGATGCCAAATAATCCAATTCTGTTTCTTTCCCAGCTTGATCTTCGAGTGAACAATACACTCATAAAGGATCAGTTTCTGTGGGTAAAGTCGAACGTACACTTGATACATTTGACTGGAACATATATATTTATTAAGCTTACTTGTGCAATATGATATGTCTTTTAGGACTTGAACAACTATGAGAGCGACCCTGAAGAGTTCTCCAGGACATTATGCAAAGATTTGGGCATTGACGACCCTGAAGTTGGAGTAAGTGAAGTACAATTGAATTTGTAAATGTACAAAATAATAGAACCTTTTGTTCCAAGTAATTTGGTTTCTTCAGTCATGAAAAGGCATGTACTTTAAAGGGATGGATTGTCAATGAGCTATTTCCATCTAGTGTCCTCCTGTATGTGTTTTTCTCCAACTGTTTGATACAATGAGAATTTCATTTATTTTTGTGAGGTAGCCTGCAATTGCTGTTGCCATTAGAGAACAGCTCTATGAGGTTTGCTTTTTCTTTTCCAAATGACTATATATATATTTTCTTTAGTTCTGTTAGAAATCTGAATGGTTTATTTCATGACTGCATCTTCATGTGTCCATGTTCCAGATAGCAGTGCAAAATGTTGCTTCAGCAAGAGAAAGCAGAATGAGCAAGAAGGGTCGCCGAGGGTTTGAGCATGTTCCACTAAG

mRNA sequence

ATGAAAGCTTCCGCCTCGCCTCATTCAAAAGCTCCATTCAAGTTCAGGATTCCGACGGCGGAGAATCTAGTCCCAATTCGTTTGGACATTGAAATTGACGGTCAGAGGTTCAAAGATGCTTTCACTTGGAACCCTTCTGATCCCGATTCAGAGGTGGTGGTCTTTGCAAAGAGGACGGTGAAAGATTTAAAACTTCCTCCGGCATTTATAACACAAATTGCACAATCCATTCAATCACAACTTACAGAATTTCGATCCTTTGAAGGTCAAGATATGTATACTGGTGAAAAAATCATTCCAATCAAGCTTGATCTTCGAGTGAACAATACACTCATAAAGGATCAGTTTCTGTGGGACTTGAACAACTATGAGAGCGACCCTGAAGAGTTCTCCAGGACATTATGCAAAGATTTGGGCATTGACGACCCTGAAGTTGGACCTGCAATTGCTGTTGCCATTAGAGAACAGCTCTATGAGATAGCAGTGCAAAATGTTGCTTCAGCAAGAGAAAGCAGAATGAGCAAGAAGGGTCGCCGAGGGTTTGAGCATGTTCCACTAAG

Coding sequence (CDS)

ATGAAAGCTTCCGCCTCGCCTCATTCAAAAGCTCCATTCAAGTTCAGGATTCCGACGGCGGAGAATCTAGTCCCAATTCGTTTGGACATTGAAATTGACGGTCAGAGGTTCAAAGATGCTTTCACTTGGAACCCTTCTGATCCCGATTCAGAGGTGGTGGTCTTTGCAAAGAGGACGGTGAAAGATTTAAAACTTCCTCCGGCATTTATAACACAAATTGCACAATCCATTCAATCACAACTTACAGAATTTCGATCCTTTGAAGGTCAAGATATGTATACTGGTGAAAAAATCATTCCAATCAAGCTTGATCTTCGAGTGAACAATACACTCATAAAGGATCAGTTTCTGTGGGACTTGAACAACTATGAGAGCGACCCTGAAGAGTTCTCCAGGACATTATGCAAAGATTTGGGCATTGACGACCCTGAAGTTGGACCTGCAATTGCTGTTGCCATTAGAGAACAGCTCTATGAGATAGCAGTGCAAAATGTTGCTTCAGCAAGAGAAAGCAGAATGAGCAAGAAGGGTCGCCGAGGGTTTGAGCATGTTCCACTAAG

Protein sequence

MKASASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIPIKLDLRVNNTLIKDQFLWDLNNYESDPEEFSRTLCKDLGIDDPEVGPAIAVAIREQLYEIAVQNVASARESRMSKKGRRGFEHVPLX
Homology
[Close]
BLAST of Chy6G113240 vs. ExPASy Swiss-Prot
Match: P93045 (Chromatin structure-remodeling complex protein BSH OS=Arabidopsis thaliana OX=3702 GN=BSH PE=1 SV=2)

HSP 1 Score: 314.7 bits (805), Expect = 7.1e-85
Identity = 150/183 (81.97%), Postives = 171/183 (93.44%), Query Frame = 0 

Query: 1   MKASASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTV 60
           MK   S   K P KFR+PTAENLVPIRLDI+ +GQR+KDAFTWNPSDPD+EVV+FAKRTV
Sbjct: 1   MKGLVSTGWKGPVKFRMPTAENLVPIRLDIQFEGQRYKDAFTWNPSDPDNEVVIFAKRTV 60

Query: 61  KDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIPIKLDLRVNNTLIKDQFLWDL 120
           KDLKLP AF+TQIAQSIQSQL++FR++EGQDMYTGEKIIPIKLDLRVN+TLIKDQFLWDL
Sbjct: 61  KDLKLPYAFVTQIAQSIQSQLSDFRAYEGQDMYTGEKIIPIKLDLRVNHTLIKDQFLWDL 120

Query: 121 NNYESDPEEFSRTLCKDLGIDDPEVGPAIAVAIREQLYEIAVQNVASARESRMSKKGRRG 180
           NN+ESDPEEF+RTLCKDLG++DPEVGPA+A AIREQLYEIA+Q+VASARESR+SKKGRRG
Sbjct: 121 NNFESDPEEFARTLCKDLGVEDPEVGPAVAFAIREQLYEIAIQSVASARESRLSKKGRRG 180

Query: 181 FEH 184
            +H
Sbjct: 181 SDH 183

[Close]
BLAST of Chy6G113240 vs. ExPASy Swiss-Prot
Match: Q6DFM1 (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 OS=Xenopus tropicalis OX=8364 GN=smarcb1 PE=2 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 1.2e-20
Identity = 59/151 (39.07%), Postives = 89/151 (58.94%), Query Frame = 0 

Query: 8   HSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPP 67
           H  A        +E LVPIRLD+EIDGQ+ +DAFTWN ++      +FA+    DL L P
Sbjct: 164 HDPAVIHENAAQSEVLVPIRLDMEIDGQKLRDAFTWNMNEKLMTPEMFAEILCDDLDLNP 223

Query: 68  -AFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIPIKLDLRVNNTLIKDQFLWDLNNYESD 127
            AF+  IA +I+ Q+  + +    +  + +++I IKL++ V N  + DQF WD++  E+ 
Sbjct: 224 LAFVPAIASAIRQQIESYPTDSILEDQSDQRVI-IKLNIHVGNISLVDQFEWDMSEKENS 283

Query: 128 PEEFSRTLCKDLGIDDPEVGPAIAVAIREQL 158
           PE+F+  LC +LG+   E    IA +IR QL
Sbjct: 284 PEKFALKLCSELGLGG-EFVTTIAYSIRGQL 312

[Close]
BLAST of Chy6G113240 vs. ExPASy Swiss-Prot
Match: Q5U379 (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1-A OS=Danio rerio OX=7955 GN=smarcb1a PE=2 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 2.1e-20
Identity = 59/151 (39.07%), Postives = 86/151 (56.95%), Query Frame = 0 

Query: 8   HSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPP 67
           H  A         E LVPIRLD+EIDGQ+ +DAFTWN ++      +FA+    DL L P
Sbjct: 159 HDPAVIHENASQQEVLVPIRLDMEIDGQKLRDAFTWNMNEKLMTPEMFAEILCDDLDLSP 218

Query: 68  -AFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIPIKLDLRVNNTLIKDQFLWDLNNYESD 127
             F+  IA +I+ Q+  + +    D    +++I IKL++ V N  + DQF WD++  E+ 
Sbjct: 219 LTFVPAIASAIRQQIESYPTDSILDEQMDQRVI-IKLNIHVGNISLVDQFEWDMSEKENS 278

Query: 128 PEEFSRTLCKDLGIDDPEVGPAIAVAIREQL 158
           PE+F+  LC +LG+   E    IA +IR QL
Sbjct: 279 PEKFALKLCSELGLGG-EFVTTIAYSIRGQL 307

[Close]
BLAST of Chy6G113240 vs. ExPASy Swiss-Prot
Match: Q6GQ82 (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 OS=Xenopus laevis OX=8355 GN=smarcb1 PE=2 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 2.1e-20
Identity = 59/151 (39.07%), Postives = 88/151 (58.28%), Query Frame = 0 

Query: 8   HSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPP 67
           H  A         E LVPIRLD+EIDGQ+ +DAFTWN ++      +FA+    DL L P
Sbjct: 164 HDPAVIHENAAQPEVLVPIRLDMEIDGQKLRDAFTWNMNEKLMTPEMFAEILCDDLDLNP 223

Query: 68  -AFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIPIKLDLRVNNTLIKDQFLWDLNNYESD 127
            AF+  IA +I+ Q+  + +    +  + +++I IKL++ V N  + DQF WD++  E+ 
Sbjct: 224 LAFVPAIASAIRQQIESYPTDSILEDQSDQRVI-IKLNIHVGNISLVDQFEWDMSEKENS 283

Query: 128 PEEFSRTLCKDLGIDDPEVGPAIAVAIREQL 158
           PE+F+  LC +LG+   E    IA +IR QL
Sbjct: 284 PEKFALKLCSELGLGG-EFVTTIAYSIRGQL 312

[Close]
BLAST of Chy6G113240 vs. ExPASy Swiss-Prot
Match: O42467 (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 OS=Tetraodon fluviatilis OX=47145 GN=smarcb1 PE=3 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 1.0e-19
Identity = 58/151 (38.41%), Postives = 87/151 (57.62%), Query Frame = 0 

Query: 8   HSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPP 67
           H  A        +E LVPIRLD+EI+GQ+ +DAFTWN ++      +FA+    DL L P
Sbjct: 159 HDPAVIHENASQSEVLVPIRLDMEIEGQKLRDAFTWNMNEKLMTPEMFAEILCDDLDLNP 218

Query: 68  -AFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIPIKLDLRVNNTLIKDQFLWDLNNYESD 127
            AF+  I  +I+ Q+  + +    +  T +++I IKL++ V N  + DQF WD++  E+ 
Sbjct: 219 LAFVPAIPSAIRQQIESYPTDAILEEQTDQRVI-IKLNIHVGNISLVDQFEWDMSEKENS 278

Query: 128 PEEFSRTLCKDLGIDDPEVGPAIAVAIREQL 158
           PE+F+  LC +LG    E    IA +IR QL
Sbjct: 279 PEKFALKLCSELG-QGGEFVTTIAYSIRGQL 307

[Close]
BLAST of Chy6G113240 vs. ExPASy TrEMBL
Match: A0A0A0L868 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G171220 PE=3 SV=1)

HSP 1 Score: 373.2 bits (957), Expect = 6.2e-100
Identity = 185/186 (99.46%), Postives = 186/186 (100.00%), Query Frame = 0 

Query: 1   MKASASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTV 60
           MKASASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTV
Sbjct: 1   MKASASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTV 60

Query: 61  KDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIPIKLDLRVNNTLIKDQFLWDL 120
           KDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIPIKLDLRVNNTLIKDQFLWDL
Sbjct: 61  KDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIPIKLDLRVNNTLIKDQFLWDL 120

Query: 121 NNYESDPEEFSRTLCKDLGIDDPEVGPAIAVAIREQLYEIAVQNVASARESRMSKKGRRG 180
           NNYESDPEEFSRTLCKDLGIDDPEVGPAIAVAIREQLYEIAVQNVASARESRMSKKGRRG
Sbjct: 121 NNYESDPEEFSRTLCKDLGIDDPEVGPAIAVAIREQLYEIAVQNVASARESRMSKKGRRG 180

Query: 181 FEHVPL 187
           FEHVP+
Sbjct: 181 FEHVPV 186

[Close]
BLAST of Chy6G113240 vs. ExPASy TrEMBL
Match: A0A5A7UEL5 (Chromatin structure-remodeling complex protein BSH isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1769G00140 PE=3 SV=1)

HSP 1 Score: 372.5 bits (955), Expect = 1.1e-99
Identity = 184/186 (98.92%), Postives = 186/186 (100.00%), Query Frame = 0 

Query: 1   MKASASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTV 60
           MKASASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTV
Sbjct: 1   MKASASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTV 60

Query: 61  KDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIPIKLDLRVNNTLIKDQFLWDL 120
           KDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIPIKLDLRVNNT+IKDQFLWDL
Sbjct: 61  KDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIPIKLDLRVNNTIIKDQFLWDL 120

Query: 121 NNYESDPEEFSRTLCKDLGIDDPEVGPAIAVAIREQLYEIAVQNVASARESRMSKKGRRG 180
           NNYESDPEEFSRTLCKDLGIDDPEVGPAIAVAIREQLYEIAVQNVASARESRMSKKGRRG
Sbjct: 121 NNYESDPEEFSRTLCKDLGIDDPEVGPAIAVAIREQLYEIAVQNVASARESRMSKKGRRG 180

Query: 181 FEHVPL 187
           FEHVP+
Sbjct: 181 FEHVPV 186

[Close]
BLAST of Chy6G113240 vs. ExPASy TrEMBL
Match: A0A1S3AXP6 (chromatin structure-remodeling complex protein BSH isoform X1 OS=Cucumis melo OX=3656 GN=LOC103483932 PE=3 SV=1)

HSP 1 Score: 372.5 bits (955), Expect = 1.1e-99
Identity = 184/186 (98.92%), Postives = 186/186 (100.00%), Query Frame = 0 

Query: 1   MKASASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTV 60
           MKASASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTV
Sbjct: 1   MKASASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTV 60

Query: 61  KDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIPIKLDLRVNNTLIKDQFLWDL 120
           KDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIPIKLDLRVNNT+IKDQFLWDL
Sbjct: 61  KDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIPIKLDLRVNNTIIKDQFLWDL 120

Query: 121 NNYESDPEEFSRTLCKDLGIDDPEVGPAIAVAIREQLYEIAVQNVASARESRMSKKGRRG 180
           NNYESDPEEFSRTLCKDLGIDDPEVGPAIAVAIREQLYEIAVQNVASARESRMSKKGRRG
Sbjct: 121 NNYESDPEEFSRTLCKDLGIDDPEVGPAIAVAIREQLYEIAVQNVASARESRMSKKGRRG 180

Query: 181 FEHVPL 187
           FEHVP+
Sbjct: 181 FEHVPV 186

[Close]
BLAST of Chy6G113240 vs. ExPASy TrEMBL
Match: A0A6J1C8S0 (chromatin structure-remodeling complex protein BSH isoform X2 OS=Momordica charantia OX=3673 GN=LOC111009356 PE=3 SV=1)

HSP 1 Score: 363.6 bits (932), Expect = 4.9e-97
Identity = 179/185 (96.76%), Postives = 183/185 (98.92%), Query Frame = 0 

Query: 1   MKASASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTV 60
           MKASAS HSK PFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTV
Sbjct: 1   MKASASAHSKTPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTV 60

Query: 61  KDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIPIKLDLRVNNTLIKDQFLWDL 120
           KDLKLPPAF+TQIAQSIQSQLTEFRSFEGQDMYTGEKIIPIKLDLRVNNTLIKDQFLWDL
Sbjct: 61  KDLKLPPAFMTQIAQSIQSQLTEFRSFEGQDMYTGEKIIPIKLDLRVNNTLIKDQFLWDL 120

Query: 121 NNYESDPEEFSRTLCKDLGIDDPEVGPAIAVAIREQLYEIAVQNVASARESRMSKKGRRG 180
           NNYESDPEEFSRTLCKDLGI+DPEVGPA+AVAIREQLYEIA+QNVASARESRMSKKGRRG
Sbjct: 121 NNYESDPEEFSRTLCKDLGIEDPEVGPAVAVAIREQLYEIAMQNVASARESRMSKKGRRG 180

Query: 181 FEHVP 186
           FEHVP
Sbjct: 181 FEHVP 185

[Close]
BLAST of Chy6G113240 vs. ExPASy TrEMBL
Match: A0A6J1C8H9 (chromatin structure-remodeling complex protein BSH isoform X1 OS=Momordica charantia OX=3673 GN=LOC111009356 PE=3 SV=1)

HSP 1 Score: 363.6 bits (932), Expect = 4.9e-97
Identity = 179/185 (96.76%), Postives = 183/185 (98.92%), Query Frame = 0 

Query: 1   MKASASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTV 60
           MKASAS HSK PFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTV
Sbjct: 1   MKASASAHSKTPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTV 60

Query: 61  KDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIPIKLDLRVNNTLIKDQFLWDL 120
           KDLKLPPAF+TQIAQSIQSQLTEFRSFEGQDMYTGEKIIPIKLDLRVNNTLIKDQFLWDL
Sbjct: 61  KDLKLPPAFMTQIAQSIQSQLTEFRSFEGQDMYTGEKIIPIKLDLRVNNTLIKDQFLWDL 120

Query: 121 NNYESDPEEFSRTLCKDLGIDDPEVGPAIAVAIREQLYEIAVQNVASARESRMSKKGRRG 180
           NNYESDPEEFSRTLCKDLGI+DPEVGPA+AVAIREQLYEIA+QNVASARESRMSKKGRRG
Sbjct: 121 NNYESDPEEFSRTLCKDLGIEDPEVGPAVAVAIREQLYEIAMQNVASARESRMSKKGRRG 180

Query: 181 FEHVP 186
           FEHVP
Sbjct: 181 FEHVP 185

[Close]
BLAST of Chy6G113240 vs. NCBI nr
Match: XP_004147636.1 (chromatin structure-remodeling complex protein BSH [Cucumis sativus] >KGN57214.1 hypothetical protein Csa_010718 [Cucumis sativus])

HSP 1 Score: 373 bits (957), Expect = 2.11e-129
Identity = 185/186 (99.46%), Postives = 186/186 (100.00%), Query Frame = 0 

Query: 1   MKASASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTV 60
           MKASASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTV
Sbjct: 1   MKASASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTV 60

Query: 61  KDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIPIKLDLRVNNTLIKDQFLWDL 120
           KDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIPIKLDLRVNNTLIKDQFLWDL
Sbjct: 61  KDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIPIKLDLRVNNTLIKDQFLWDL 120

Query: 121 NNYESDPEEFSRTLCKDLGIDDPEVGPAIAVAIREQLYEIAVQNVASARESRMSKKGRRG 180
           NNYESDPEEFSRTLCKDLGIDDPEVGPAIAVAIREQLYEIAVQNVASARESRMSKKGRRG
Sbjct: 121 NNYESDPEEFSRTLCKDLGIDDPEVGPAIAVAIREQLYEIAVQNVASARESRMSKKGRRG 180

Query: 181 FEHVPL 186
           FEHVP+
Sbjct: 181 FEHVPV 186

[Close]
BLAST of Chy6G113240 vs. NCBI nr
Match: XP_008439008.1 (PREDICTED: chromatin structure-remodeling complex protein BSH isoform X1 [Cucumis melo] >KAA0052145.1 chromatin structure-remodeling complex protein BSH isoform X1 [Cucumis melo var. makuwa] >TYK05110.1 chromatin structure-remodeling complex protein BSH isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 372 bits (955), Expect = 4.25e-129
Identity = 184/186 (98.92%), Postives = 186/186 (100.00%), Query Frame = 0 

Query: 1   MKASASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTV 60
           MKASASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTV
Sbjct: 1   MKASASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTV 60

Query: 61  KDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIPIKLDLRVNNTLIKDQFLWDL 120
           KDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIPIKLDLRVNNT+IKDQFLWDL
Sbjct: 61  KDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIPIKLDLRVNNTIIKDQFLWDL 120

Query: 121 NNYESDPEEFSRTLCKDLGIDDPEVGPAIAVAIREQLYEIAVQNVASARESRMSKKGRRG 180
           NNYESDPEEFSRTLCKDLGIDDPEVGPAIAVAIREQLYEIAVQNVASARESRMSKKGRRG
Sbjct: 121 NNYESDPEEFSRTLCKDLGIDDPEVGPAIAVAIREQLYEIAVQNVASARESRMSKKGRRG 180

Query: 181 FEHVPL 186
           FEHVP+
Sbjct: 181 FEHVPV 186

[Close]
BLAST of Chy6G113240 vs. NCBI nr
Match: XP_038898737.1 (chromatin structure-remodeling complex protein BSH [Benincasa hispida])

HSP 1 Score: 368 bits (944), Expect = 2.02e-127
Identity = 181/186 (97.31%), Postives = 185/186 (99.46%), Query Frame = 0 

Query: 1   MKASASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTV 60
           MKASASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVV+FAKRTV
Sbjct: 1   MKASASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVIFAKRTV 60

Query: 61  KDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIPIKLDLRVNNTLIKDQFLWDL 120
           KDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMY+GEKIIPIKLDLRVNNTLIKDQFLWDL
Sbjct: 61  KDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYSGEKIIPIKLDLRVNNTLIKDQFLWDL 120

Query: 121 NNYESDPEEFSRTLCKDLGIDDPEVGPAIAVAIREQLYEIAVQNVASARESRMSKKGRRG 180
           NNYESDPEEFSRT CKDLGI+DPEVGPAIAVAIREQLYEIAVQNVASARESRMSKKGRRG
Sbjct: 121 NNYESDPEEFSRTFCKDLGIEDPEVGPAIAVAIREQLYEIAVQNVASARESRMSKKGRRG 180

Query: 181 FEHVPL 186
           FEHVP+
Sbjct: 181 FEHVPV 186

[Close]
BLAST of Chy6G113240 vs. NCBI nr
Match: XP_022138107.1 (chromatin structure-remodeling complex protein BSH isoform X3 [Momordica charantia])

HSP 1 Score: 363 bits (932), Expect = 4.39e-126
Identity = 179/185 (96.76%), Postives = 183/185 (98.92%), Query Frame = 0 

Query: 1   MKASASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTV 60
           MKASAS HSK PFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTV
Sbjct: 1   MKASASAHSKTPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTV 60

Query: 61  KDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIPIKLDLRVNNTLIKDQFLWDL 120
           KDLKLPPAF+TQIAQSIQSQLTEFRSFEGQDMYTGEKIIPIKLDLRVNNTLIKDQFLWDL
Sbjct: 61  KDLKLPPAFMTQIAQSIQSQLTEFRSFEGQDMYTGEKIIPIKLDLRVNNTLIKDQFLWDL 120

Query: 121 NNYESDPEEFSRTLCKDLGIDDPEVGPAIAVAIREQLYEIAVQNVASARESRMSKKGRRG 180
           NNYESDPEEFSRTLCKDLGI+DPEVGPA+AVAIREQLYEIA+QNVASARESRMSKKGRRG
Sbjct: 121 NNYESDPEEFSRTLCKDLGIEDPEVGPAVAVAIREQLYEIAMQNVASARESRMSKKGRRG 180

Query: 181 FEHVP 185
           FEHVP
Sbjct: 181 FEHVP 185

[Close]
BLAST of Chy6G113240 vs. NCBI nr
Match: XP_022138106.1 (chromatin structure-remodeling complex protein BSH isoform X2 [Momordica charantia])

HSP 1 Score: 363 bits (932), Expect = 8.29e-126
Identity = 179/185 (96.76%), Postives = 183/185 (98.92%), Query Frame = 0 

Query: 1   MKASASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTV 60
           MKASAS HSK PFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTV
Sbjct: 1   MKASASAHSKTPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTV 60

Query: 61  KDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIPIKLDLRVNNTLIKDQFLWDL 120
           KDLKLPPAF+TQIAQSIQSQLTEFRSFEGQDMYTGEKIIPIKLDLRVNNTLIKDQFLWDL
Sbjct: 61  KDLKLPPAFMTQIAQSIQSQLTEFRSFEGQDMYTGEKIIPIKLDLRVNNTLIKDQFLWDL 120

Query: 121 NNYESDPEEFSRTLCKDLGIDDPEVGPAIAVAIREQLYEIAVQNVASARESRMSKKGRRG 180
           NNYESDPEEFSRTLCKDLGI+DPEVGPA+AVAIREQLYEIA+QNVASARESRMSKKGRRG
Sbjct: 121 NNYESDPEEFSRTLCKDLGIEDPEVGPAVAVAIREQLYEIAMQNVASARESRMSKKGRRG 180

Query: 181 FEHVP 185
           FEHVP
Sbjct: 181 FEHVP 185

[Close]
BLAST of Chy6G113240 vs. TAIR 10
Match: AT3G17590.1 (transcription regulatory protein SNF5, putative (BSH) )

HSP 1 Score: 314.7 bits (805), Expect = 5.0e-86
Identity = 150/183 (81.97%), Postives = 171/183 (93.44%), Query Frame = 0 

Query: 1   MKASASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTV 60
           MK   S   K P KFR+PTAENLVPIRLDI+ +GQR+KDAFTWNPSDPD+EVV+FAKRTV
Sbjct: 1   MKGLVSTGWKGPVKFRMPTAENLVPIRLDIQFEGQRYKDAFTWNPSDPDNEVVIFAKRTV 60

Query: 61  KDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIPIKLDLRVNNTLIKDQFLWDL 120
           KDLKLP AF+TQIAQSIQSQL++FR++EGQDMYTGEKIIPIKLDLRVN+TLIKDQFLWDL
Sbjct: 61  KDLKLPYAFVTQIAQSIQSQLSDFRAYEGQDMYTGEKIIPIKLDLRVNHTLIKDQFLWDL 120

Query: 121 NNYESDPEEFSRTLCKDLGIDDPEVGPAIAVAIREQLYEIAVQNVASARESRMSKKGRRG 180
           NN+ESDPEEF+RTLCKDLG++DPEVGPA+A AIREQLYEIA+Q+VASARESR+SKKGRRG
Sbjct: 121 NNFESDPEEFARTLCKDLGVEDPEVGPAVAFAIREQLYEIAIQSVASARESRLSKKGRRG 180

Query: 181 FEH 184
            +H
Sbjct: 181 SDH 183

[Close]
BLAST of Chy6G113240 vs. TAIR 10
Match: AT3G17590.2 (transcription regulatory protein SNF5, putative (BSH) )

HSP 1 Score: 310.8 bits (795), Expect = 7.2e-85
Identity = 151/185 (81.62%), Postives = 171/185 (92.43%), Query Frame = 0 

Query: 1   MKASASPHSKAPFKFRI--PTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKR 60
           MK   S   K P KFRI  PTAENLVPIRLDI+ +GQR+KDAFTWNPSDPD+EVV+FAKR
Sbjct: 1   MKGLVSTGWKGPVKFRIYRPTAENLVPIRLDIQFEGQRYKDAFTWNPSDPDNEVVIFAKR 60

Query: 61  TVKDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIPIKLDLRVNNTLIKDQFLW 120
           TVKDLKLP AF+TQIAQSIQSQL++FR++EGQDMYTGEKIIPIKLDLRVN+TLIKDQFLW
Sbjct: 61  TVKDLKLPYAFVTQIAQSIQSQLSDFRAYEGQDMYTGEKIIPIKLDLRVNHTLIKDQFLW 120

Query: 121 DLNNYESDPEEFSRTLCKDLGIDDPEVGPAIAVAIREQLYEIAVQNVASARESRMSKKGR 180
           DLNN+ESDPEEF+RTLCKDLG++DPEVGPA+A AIREQLYEIA+Q+VASARESR+SKKGR
Sbjct: 121 DLNNFESDPEEFARTLCKDLGVEDPEVGPAVAFAIREQLYEIAIQSVASARESRLSKKGR 180

Query: 181 RGFEH 184
           RG +H
Sbjct: 181 RGSDH 185

The following BLAST results are available for this feature:
BLAST of Chy6G113240 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P930457.1e-8581.97Chromatin structure-remodeling complex protein BSH OS=Arabidopsis thaliana OX=37... [more]
Q6DFM11.2e-2039.07SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfami... [more]
Q5U3792.1e-2039.07SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfami... [more]
Q6GQ822.1e-2039.07SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfami... [more]
O424671.0e-1938.41SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfami... [more]
BLAST of Chy6G113240 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L8686.2e-10099.46Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G171220 PE=3 SV=1[more]
A0A5A7UEL51.1e-9998.92Chromatin structure-remodeling complex protein BSH isoform X1 OS=Cucumis melo va... [more]
A0A1S3AXP61.1e-9998.92chromatin structure-remodeling complex protein BSH isoform X1 OS=Cucumis melo OX... [more]
A0A6J1C8S04.9e-9796.76chromatin structure-remodeling complex protein BSH isoform X2 OS=Momordica chara... [more]
A0A6J1C8H94.9e-9796.76chromatin structure-remodeling complex protein BSH isoform X1 OS=Momordica chara... [more]
BLAST of Chy6G113240 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004147636.12.11e-12999.46chromatin structure-remodeling complex protein BSH [Cucumis sativus] >KGN57214.1... [more]
XP_008439008.14.25e-12998.92PREDICTED: chromatin structure-remodeling complex protein BSH isoform X1 [Cucumi... [more]
XP_038898737.12.02e-12797.31chromatin structure-remodeling complex protein BSH [Benincasa hispida][more]
XP_022138107.14.39e-12696.76chromatin structure-remodeling complex protein BSH isoform X3 [Momordica charant... [more]
XP_022138106.18.29e-12696.76chromatin structure-remodeling complex protein BSH isoform X2 [Momordica charant... [more]
BLAST of Chy6G113240 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G17590.15.0e-8681.97transcription regulatory protein SNF5, putative (BSH) [more]
AT3G17590.27.2e-8581.62transcription regulatory protein SNF5, putative (BSH) [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006939SNF5/SMARCB1/INI1PFAMPF04855SNF5coord: 96..161
e-value: 7.7E-14
score: 52.0
coord: 20..87
e-value: 1.2E-18
score: 67.8
NoneNo IPR availablePANTHERPTHR10019:SF5SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY B MEMBER 1coord: 8..183
NoneNo IPR availablePANTHERPTHR10019SNF5coord: 8..183

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Chy6G113240.1Chy6G113240.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006338 chromatin remodeling
biological_process GO:0006357 regulation of transcription by RNA polymerase II
cellular_component GO:0000228 nuclear chromosome
cellular_component GO:0070603 SWI/SNF superfamily-type complex
molecular_function GO:0003712 transcription coregulator activity