Chy6G112660 (gene) Cucumber (hystrix) v1

Overview


Name	Chy6G112660
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	GATA transcription factor
Location	chrH06: 5043147 .. 5043769 (-)
RNA-Seq Expression	Chy6G112660
Synteny	Chy6G112660

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGATGGATCCGAGTGATAGAGTGAGTACTAACCTCTGTTTTTGCTGATTACTTCTGATTTTGATGGTTTCTGATCAGTGTTTGTAAATGGTGCAGGGATCGGAGTCGGAGGACATCTCCGGGAAGAACTCTAGTGGGGTTTCGTCGGAGGAGAGTCAAGTGAATGAGCAGAACAAGAAGACTTGTGCCGACTGTGGTACTTCGAAAACCCCGTTATGGAGAGGCGGCCCGGCTGGACCTAAGGTGATCTTTTATTGATTGATCTGAAGTTTAGTAGTCCTAGAAGCGTTTTTTTGTTGATTCAAATCTCTGATTTCTGTTTGTTTTTCTTTCTGATTTTTCAGTCTCTTTGCAATGCGTGTGGGATCAGAAGTAGGAAGAAGAGAAGAGCGATTTTAGGGTTGAGCAAAGGAGTTGTTGAAGATAAGAAGAACAAAAAGAGCAGTAATATAAGTAGTAATAGTAAGTTCAGAGATAGTTTGAAACAAAGGCTTTTGGCTTTGGGTAGAGAAGTTTTGATGCAGAGATCTACTGTTGAAAGACAAAGGAAGAAGTTAGGAGAAGAAGAACAAGCTGCTGTGCTTCTGATGGCTTTATCTTGTGGCTCTGTTTATGCTTGA

mRNA sequence

ATGATGATGGATCCGAGTGATAGAGGATCGGAGTCGGAGGACATCTCCGGGAAGAACTCTAGTGGGGTTTCGTCGGAGGAGAGTCAAGTGAATGAGCAGAACAAGAAGACTTGTGCCGACTGTGGTACTTCGAAAACCCCGTTATGGAGAGGCGGCCCGGCTGGACCTAAGTCTCTTTGCAATGCGTGTGGGATCAGAAGTAGGAAGAAGAGAAGAGCGATTTTAGGGTTGAGCAAAGGAGTTGTTGAAGATAAGAAGAACAAAAAGAGCAGTAATATAAGTAGTAATAGTAAGTTCAGAGATAGTTTGAAACAAAGGCTTTTGGCTTTGGGTAGAGAAGTTTTGATGCAGAGATCTACTGTTGAAAGACAAAGGAAGAAGTTAGGAGAAGAAGAACAAGCTGCTGTGCTTCTGATGGCTTTATCTTGTGGCTCTGTTTATGCTTGA

Coding sequence (CDS)

ATGATGATGGATCCGAGTGATAGAGGATCGGAGTCGGAGGACATCTCCGGGAAGAACTCTAGTGGGGTTTCGTCGGAGGAGAGTCAAGTGAATGAGCAGAACAAGAAGACTTGTGCCGACTGTGGTACTTCGAAAACCCCGTTATGGAGAGGCGGCCCGGCTGGACCTAAGTCTCTTTGCAATGCGTGTGGGATCAGAAGTAGGAAGAAGAGAAGAGCGATTTTAGGGTTGAGCAAAGGAGTTGTTGAAGATAAGAAGAACAAAAAGAGCAGTAATATAAGTAGTAATAGTAAGTTCAGAGATAGTTTGAAACAAAGGCTTTTGGCTTTGGGTAGAGAAGTTTTGATGCAGAGATCTACTGTTGAAAGACAAAGGAAGAAGTTAGGAGAAGAAGAACAAGCTGCTGTGCTTCTGATGGCTTTATCTTGTGGCTCTGTTTATGCTTGA

Protein sequence

MMMDPSDRGSESEDISGKNSSGVSSEESQVNEQNKKTCADCGTSKTPLWRGGPAGPKSLCNACGIRSRKKRRAILGLSKGVVEDKKNKKSSNISSNSKFRDSLKQRLLALGREVLMQRSTVERQRKKLGEEEQAAVLLMALSCGSVYA*

Homology

[Close]

BLAST of Chy6G112660 vs. ExPASy Swiss-Prot
Match: Q8LG10 (GATA transcription factor 15 OS=Arabidopsis thaliana OX=3702 GN=GATA15 PE=2 SV=2)

HSP 1 Score: 147.9 bits (372), Expect = 9.1e-35
Identity = 96/155 (61.94%), Postives = 112/155 (72.26%), Query Frame = 0


Query: 2   MMDPSDRGSESEDISGKNSSGVSSEESQVNEQN------KKTCADCGTSKTPLWRGGPAG 61
           M+DP+++  +SE +  K +S  + EE   +  N      KK+CA CGTSKTPLWRGGPAG
Sbjct: 1   MLDPTEKVIDSESMESKLTSVDAIEEHSSSSSNEAISNEKKSCAICGTSKTPLWRGGPAG 60

Query: 62  PKSLCNACGIRSRKKRRAILGLSKGVVEDKKNKKSSNISSNSKFRDSLKQRLLALGREVL 121
           PKSLCNACGIR+RKKRR ++       EDKK KKS N   N KF DSLKQRL+ LGREV+
Sbjct: 61  PKSLCNACGIRNRKKRRTLISNRS---EDKK-KKSHN--RNPKFGDSLKQRLMELGREVM 120

Query: 122 MQRSTVERQRK-KLGEEEQAAVLLMALS-CGSVYA 149
           MQRST E QR+ KLGEEEQAAVLLMALS   SVYA
Sbjct: 121 MQRSTAENQRRNKLGEEEQAAVLLMALSYASSVYA 149

[Close]

BLAST of Chy6G112660 vs. ExPASy Swiss-Prot
Match: Q9FJ10 (GATA transcription factor 16 OS=Arabidopsis thaliana OX=3702 GN=GATA16 PE=2 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 1.3e-33
Identity = 88/149 (59.06%), Postives = 108/149 (72.48%), Query Frame = 0


Query: 2   MMDPSDRG--SESEDISGKNSSGVSSEESQVNEQNKKTCADCGTSKTPLWRGGPAGPKSL 61
           M+D S++    +SE +  +    +    + VN++ KKTCADCGTSKTPLWRGGP GPKSL
Sbjct: 1   MLDHSEKVLLVDSETMKTRAEDMIEQNNTSVNDK-KKTCADCGTSKTPLWRGGPVGPKSL 60

Query: 62  CNACGIRSRKKRRAILGLSKGVVEDKKNKKSSNISSNSKFRDSLKQRLLALGREVLMQRS 121
           CNACGIR+RKKRR       G  ++KK KKSS+   N KF +SLKQ L+ LG   + +RS
Sbjct: 61  CNACGIRNRKKRRG------GTEDNKKLKKSSSGGGNRKFGESLKQSLMDLG---IRKRS 120

Query: 122 TVERQRKKLGEEEQAAVLLMALSCGSVYA 149
           TVE+QR+KLGEEEQAAVLLMALS GSVYA
Sbjct: 121 TVEKQRQKLGEEEQAAVLLMALSYGSVYA 139

[Close]

BLAST of Chy6G112660 vs. ExPASy Swiss-Prot
Match: Q9LIB5 (GATA transcription factor 17 OS=Arabidopsis thaliana OX=3702 GN=GATA17 PE=2 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 6.5e-25
Identity = 80/180 (44.44%), Postives = 100/180 (55.56%), Query Frame = 0


Query: 7   DRGSESEDISGKNSSGVSSEESQVNEQNKKTCADCGTSKTPLWRGGPAGPKSLCNACGIR 66
           D   E  D+  +N S   S     +   K+TC DCGT +TPLWRGGPAGPKSLCNACGI+
Sbjct: 13  DSAGELSDVDNENCSSSGSGGGSSSGDTKRTCVDCGTIRTPLWRGGPAGPKSLCNACGIK 72

Query: 67  SRKKRRAILGLSKGVVEDKKNKKS-----------------------------------S 126
           SRKKR+A LG+     E KKN+KS                                   +
Sbjct: 73  SRKKRQAALGMRS--EEKKKNRKSNCNNDLNLDHRNAKKYKINIVDDGKIDIDDDPKICN 132

Query: 127 NISSNSKFRDSLKQRLLALGREV-LMQRSTVERQR--KKLGEEEQAAVLLMALSCGSVYA 149
           N  S+S   +    + L LG +V +M+RS VE++R  +KLGEEE+AAVLLMALSC SVYA
Sbjct: 133 NKRSSSSSSNKGVSKFLDLGFKVPVMKRSAVEKKRLWRKLGEEERAAVLLMALSCSSVYA 190

[Close]

BLAST of Chy6G112660 vs. ExPASy Swiss-Prot
Match: Q8LC59 (GATA transcription factor 23 OS=Arabidopsis thaliana OX=3702 GN=GATA23 PE=2 SV=2)

HSP 1 Score: 78.6 bits (192), Expect = 6.8e-14
Identity = 51/129 (39.53%), Postives = 70/129 (54.26%), Query Frame = 0


Query: 20  SSGVSSEESQVNEQNKKTCADCGTSKTPLWRGGPAGPKSLCNACGIRSRKKRRAILGLSK 79
           SS   S   +  +   + C++C T+KTP+WRGGP GPKSLCNACGIR RK+RR+ L L  
Sbjct: 10  SSSYVSVRMKEEKGTIRCCSECKTTKTPMWRGGPTGPKSLCNACGIRHRKQRRSEL-LGI 69

Query: 80  GVVEDKKNKKSSNISSNSKFRDSLKQRLLALGREVLMQRSTVERQRKKLGEEEQAAVLLM 139
            ++   K+  S  I+  S     +                   ++R+ L EEEQAA+ L+
Sbjct: 70  HIIRSHKSLASKKINLLSSSHGGV-----------------AVKKRRSLKEEEQAALCLL 120

Query: 140 ALSCGSVYA 149
            LSC SV A
Sbjct: 130 LLSCSSVLA 120

[Close]

BLAST of Chy6G112660 vs. ExPASy Swiss-Prot
Match: Q9SZI6 (Putative GATA transcription factor 22 OS=Arabidopsis thaliana OX=3702 GN=GATA22 PE=1 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 5.4e-11
Identity = 61/182 (33.52%), Postives = 85/182 (46.70%), Query Frame = 0


Query: 10  SESEDISGKNSSGVSSEESQVNEQNK---KTCADCGTSKTPLWRGGPAGPKSLCNACGIR 69
           S  +  +   SS +S+ E Q    N    + C+DC T+KTPLWR GP GPKSLCNACGIR
Sbjct: 170 SSKQHTNNDQSSNLSNSERQNGYNNDCVIRICSDCNTTKTPLWRSGPRGPKSLCNACGIR 229

Query: 70  SRKKRR---------AILGLSKGVVEDK---KNKKSS---NISSNSKFRDSLKQRLLALG 129
            RK RR         A+ G+S  V++ K   KNK S+    I S    + +  +R++ L 
Sbjct: 230 QRKARRAAMATATATAVSGVSPPVMKKKMQNKNKISNGVYKILSPLPLKVNTCKRMITLE 289

Query: 130 REVLMQRSTVERQRKKLG--------------------------EEEQAAVLLMALSCGS 148
              L +    +     L                           +E++AA+LLMALS G 
Sbjct: 290 ETALAEDLETQSNSTMLSSSDNIYFDDLALLLSKSSAYQQVFPQDEKEAAILLMALSHGM 349

[Close]

BLAST of Chy6G112660 vs. ExPASy TrEMBL
Match: A0A0A0L942 (GATA-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G165640 PE=4 SV=1)

HSP 1 Score: 276.6 bits (706), Expect = 6.3e-71
Identity = 147/148 (99.32%), Postives = 148/148 (100.00%), Query Frame = 0


Query: 1   MMMDPSDRGSESEDISGKNSSGVSSEESQVNEQNKKTCADCGTSKTPLWRGGPAGPKSLC 60
           MMMDPSDRGSESED+SGKNSSGVSSEESQVNEQNKKTCADCGTSKTPLWRGGPAGPKSLC
Sbjct: 1   MMMDPSDRGSESEDMSGKNSSGVSSEESQVNEQNKKTCADCGTSKTPLWRGGPAGPKSLC 60

Query: 61  NACGIRSRKKRRAILGLSKGVVEDKKNKKSSNISSNSKFRDSLKQRLLALGREVLMQRST 120
           NACGIRSRKKRRAILGLSKGVVEDKKNKKSSNISSNSKFRDSLKQRLLALGREVLMQRST
Sbjct: 61  NACGIRSRKKRRAILGLSKGVVEDKKNKKSSNISSNSKFRDSLKQRLLALGREVLMQRST 120

Query: 121 VERQRKKLGEEEQAAVLLMALSCGSVYA 149
           VERQRKKLGEEEQAAVLLMALSCGSVYA
Sbjct: 121 VERQRKKLGEEEQAAVLLMALSCGSVYA 148

[Close]

BLAST of Chy6G112660 vs. ExPASy TrEMBL
Match: A0A5A7U5C0 (GATA transcription factor 16-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold209G001340 PE=4 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 1.2e-69
Identity = 145/147 (98.64%), Postives = 146/147 (99.32%), Query Frame = 0


Query: 2   MMDPSDRGSESEDISGKNSSGVSSEESQVNEQNKKTCADCGTSKTPLWRGGPAGPKSLCN 61
           MMDPSDRGSESED+SGKNSSGVSSEESQVNEQNKKTCADCGTSKTPLWRGGPAGPKSLCN
Sbjct: 1   MMDPSDRGSESEDMSGKNSSGVSSEESQVNEQNKKTCADCGTSKTPLWRGGPAGPKSLCN 60

Query: 62  ACGIRSRKKRRAILGLSKGVVEDKKNKKSSNISSNSKFRDSLKQRLLALGREVLMQRSTV 121
           ACGIRSRKKRRAILGLSKGVVEDKKNKKSSNISSNSK RDSLKQRLLALGREVLMQRSTV
Sbjct: 61  ACGIRSRKKRRAILGLSKGVVEDKKNKKSSNISSNSKLRDSLKQRLLALGREVLMQRSTV 120

Query: 122 ERQRKKLGEEEQAAVLLMALSCGSVYA 149
           ERQRKKLGEEEQAAVLLMALSCGSVYA
Sbjct: 121 ERQRKKLGEEEQAAVLLMALSCGSVYA 147

[Close]

BLAST of Chy6G112660 vs. ExPASy TrEMBL
Match: A0A1S3AXI2 (GATA transcription factor 16-like OS=Cucumis melo OX=3656 GN=LOC103483877 PE=4 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 1.2e-69
Identity = 145/147 (98.64%), Postives = 146/147 (99.32%), Query Frame = 0


Query: 2   MMDPSDRGSESEDISGKNSSGVSSEESQVNEQNKKTCADCGTSKTPLWRGGPAGPKSLCN 61
           MMDPSDRGSESED+SGKNSSGVSSEESQVNEQNKKTCADCGTSKTPLWRGGPAGPKSLCN
Sbjct: 1   MMDPSDRGSESEDMSGKNSSGVSSEESQVNEQNKKTCADCGTSKTPLWRGGPAGPKSLCN 60

Query: 62  ACGIRSRKKRRAILGLSKGVVEDKKNKKSSNISSNSKFRDSLKQRLLALGREVLMQRSTV 121
           ACGIRSRKKRRAILGLSKGVVEDKKNKKSSNISSNSK RDSLKQRLLALGREVLMQRSTV
Sbjct: 61  ACGIRSRKKRRAILGLSKGVVEDKKNKKSSNISSNSKLRDSLKQRLLALGREVLMQRSTV 120

Query: 122 ERQRKKLGEEEQAAVLLMALSCGSVYA 149
           ERQRKKLGEEEQAAVLLMALSCGSVYA
Sbjct: 121 ERQRKKLGEEEQAAVLLMALSCGSVYA 147

[Close]

BLAST of Chy6G112660 vs. ExPASy TrEMBL
Match: A0A6J1C7L6 (GATA transcription factor 16-like OS=Momordica charantia OX=3673 GN=LOC111009131 PE=4 SV=1)

HSP 1 Score: 254.2 bits (648), Expect = 3.3e-64
Identity = 141/152 (92.76%), Postives = 145/152 (95.39%), Query Frame = 0


Query: 1   MMMDPSDRGSESEDISGKNSSGVSSEESQVNEQNKKTCADCGTSKTPLWRGGPAGPKSLC 60
           MM+DPSDRGSESED+SGKNS GVSSEESQVNEQNKKTCADCGTSKTPLWRGGPAGPKSLC
Sbjct: 1   MMLDPSDRGSESEDMSGKNSGGVSSEESQVNEQNKKTCADCGTSKTPLWRGGPAGPKSLC 60

Query: 61  NACGIRSRKKRRAILGLSKGVVEDKKNKK-SSNISSN---SKFRDSLKQRLLALGREVLM 120
           NACGIRSRKKRRAILGLSKGVVEDKK+KK SSNISSN   S+ RDSLKQRLLALGREVLM
Sbjct: 61  NACGIRSRKKRRAILGLSKGVVEDKKSKKSSSNISSNSSSSRLRDSLKQRLLALGREVLM 120

Query: 121 QRSTVERQRKKLGEEEQAAVLLMALSCGSVYA 149
           QRSTVERQRKKLGEEEQAAVLLMALS GSVYA
Sbjct: 121 QRSTVERQRKKLGEEEQAAVLLMALSYGSVYA 152

[Close]

BLAST of Chy6G112660 vs. ExPASy TrEMBL
Match: A0A6J1GF07 (GATA transcription factor 15-like OS=Cucurbita moschata OX=3662 GN=LOC111453593 PE=4 SV=1)

HSP 1 Score: 247.7 bits (631), Expect = 3.1e-62
Identity = 136/150 (90.67%), Postives = 141/150 (94.00%), Query Frame = 0


Query: 1   MMMDPSDRGSESEDISGKNSSGVSSEESQVNEQNKKTCADCGTSKTPLWRGGPAGPKSLC 60
           MMMDPSDR SESEDIS KNS GVSSEESQVNEQNKKTCADCGTSKTPLWRGGPAGPKSLC
Sbjct: 1   MMMDPSDRVSESEDISSKNSGGVSSEESQVNEQNKKTCADCGTSKTPLWRGGPAGPKSLC 60

Query: 61  NACGIRSRKKRRAILGLSKGVVEDKKNKKSS--NISSNSKFRDSLKQRLLALGREVLMQR 120
           NACGIRSRKKRRAILGLSKGVVEDKKNK+S+  N  SNSK RDSLKQRL+ALGREVLMQR
Sbjct: 61  NACGIRSRKKRRAILGLSKGVVEDKKNKRSNSCNNISNSKLRDSLKQRLMALGREVLMQR 120

Query: 121 STVERQRKKLGEEEQAAVLLMALSCGSVYA 149
           S+VERQRKKLGEEEQAAVLLMALS GSV+A
Sbjct: 121 SSVERQRKKLGEEEQAAVLLMALSYGSVFA 150

[Close]

BLAST of Chy6G112660 vs. NCBI nr
Match: XP_004134235.1 (GATA transcription factor 16 [Cucumis sativus] >KGN57147.1 hypothetical protein Csa_010926 [Cucumis sativus])

HSP 1 Score: 278 bits (710), Expect = 8.11e-94
Identity = 147/148 (99.32%), Postives = 148/148 (100.00%), Query Frame = 0


Query: 1   MMMDPSDRGSESEDISGKNSSGVSSEESQVNEQNKKTCADCGTSKTPLWRGGPAGPKSLC 60
           MMMDPSDRGSESED+SGKNSSGVSSEESQVNEQNKKTCADCGTSKTPLWRGGPAGPKSLC
Sbjct: 1   MMMDPSDRGSESEDMSGKNSSGVSSEESQVNEQNKKTCADCGTSKTPLWRGGPAGPKSLC 60

Query: 61  NACGIRSRKKRRAILGLSKGVVEDKKNKKSSNISSNSKFRDSLKQRLLALGREVLMQRST 120
           NACGIRSRKKRRAILGLSKGVVEDKKNKKSSNISSNSKFRDSLKQRLLALGREVLMQRST
Sbjct: 61  NACGIRSRKKRRAILGLSKGVVEDKKNKKSSNISSNSKFRDSLKQRLLALGREVLMQRST 120

Query: 121 VERQRKKLGEEEQAAVLLMALSCGSVYA 148
           VERQRKKLGEEEQAAVLLMALSCGSVYA
Sbjct: 121 VERQRKKLGEEEQAAVLLMALSCGSVYA 148

[Close]

BLAST of Chy6G112660 vs. NCBI nr
Match: XP_008438922.1 (PREDICTED: GATA transcription factor 16-like [Cucumis melo] >KAA0049527.1 GATA transcription factor 16-like [Cucumis melo var. makuwa] >TYK16205.1 GATA transcription factor 16-like [Cucumis melo var. makuwa])

HSP 1 Score: 273 bits (699), Expect = 3.73e-92
Identity = 145/147 (98.64%), Postives = 146/147 (99.32%), Query Frame = 0


Query: 2   MMDPSDRGSESEDISGKNSSGVSSEESQVNEQNKKTCADCGTSKTPLWRGGPAGPKSLCN 61
           MMDPSDRGSESED+SGKNSSGVSSEESQVNEQNKKTCADCGTSKTPLWRGGPAGPKSLCN
Sbjct: 1   MMDPSDRGSESEDMSGKNSSGVSSEESQVNEQNKKTCADCGTSKTPLWRGGPAGPKSLCN 60

Query: 62  ACGIRSRKKRRAILGLSKGVVEDKKNKKSSNISSNSKFRDSLKQRLLALGREVLMQRSTV 121
           ACGIRSRKKRRAILGLSKGVVEDKKNKKSSNISSNSK RDSLKQRLLALGREVLMQRSTV
Sbjct: 61  ACGIRSRKKRRAILGLSKGVVEDKKNKKSSNISSNSKLRDSLKQRLLALGREVLMQRSTV 120

Query: 122 ERQRKKLGEEEQAAVLLMALSCGSVYA 148
           ERQRKKLGEEEQAAVLLMALSCGSVYA
Sbjct: 121 ERQRKKLGEEEQAAVLLMALSCGSVYA 147

[Close]

BLAST of Chy6G112660 vs. NCBI nr
Match: XP_038877875.1 (GATA transcription factor 15-like [Benincasa hispida])

HSP 1 Score: 261 bits (667), Expect = 2.82e-87
Identity = 141/148 (95.27%), Postives = 144/148 (97.30%), Query Frame = 0


Query: 1   MMMDPSDRGSESEDISGKNSSGVSSEESQVNEQNKKTCADCGTSKTPLWRGGPAGPKSLC 60
           MMMDPSDRGSESED+SGKN+ GVSSEESQVNEQNKKTCADCGTSKTPLWRGGPAGPKSLC
Sbjct: 1   MMMDPSDRGSESEDMSGKNTGGVSSEESQVNEQNKKTCADCGTSKTPLWRGGPAGPKSLC 60

Query: 61  NACGIRSRKKRRAILGLSKGVVEDKKNKKSSNISSNSKFRDSLKQRLLALGREVLMQRST 120
           NACGIRSRKKRRAILGLSKGVVEDKKNKKS+NIS NSK RDSLKQRLLALGREVLMQRST
Sbjct: 61  NACGIRSRKKRRAILGLSKGVVEDKKNKKSNNIS-NSKLRDSLKQRLLALGREVLMQRST 120

Query: 121 VERQRKKLGEEEQAAVLLMALSCGSVYA 148
           VERQRKKLGEEEQAAVLLMALS GSVYA
Sbjct: 121 VERQRKKLGEEEQAAVLLMALSYGSVYA 147

[Close]

BLAST of Chy6G112660 vs. NCBI nr
Match: XP_022137770.1 (GATA transcription factor 16-like [Momordica charantia])

HSP 1 Score: 255 bits (652), Expect = 6.47e-85
Identity = 141/152 (92.76%), Postives = 145/152 (95.39%), Query Frame = 0


Query: 1   MMMDPSDRGSESEDISGKNSSGVSSEESQVNEQNKKTCADCGTSKTPLWRGGPAGPKSLC 60
           MM+DPSDRGSESED+SGKNS GVSSEESQVNEQNKKTCADCGTSKTPLWRGGPAGPKSLC
Sbjct: 1   MMLDPSDRGSESEDMSGKNSGGVSSEESQVNEQNKKTCADCGTSKTPLWRGGPAGPKSLC 60

Query: 61  NACGIRSRKKRRAILGLSKGVVEDKKNKKSS-NISSNS---KFRDSLKQRLLALGREVLM 120
           NACGIRSRKKRRAILGLSKGVVEDKK+KKSS NISSNS   + RDSLKQRLLALGREVLM
Sbjct: 61  NACGIRSRKKRRAILGLSKGVVEDKKSKKSSSNISSNSSSSRLRDSLKQRLLALGREVLM 120

Query: 121 QRSTVERQRKKLGEEEQAAVLLMALSCGSVYA 148
           QRSTVERQRKKLGEEEQAAVLLMALS GSVYA
Sbjct: 121 QRSTVERQRKKLGEEEQAAVLLMALSYGSVYA 152

[Close]

BLAST of Chy6G112660 vs. NCBI nr
Match: XP_022950506.1 (GATA transcription factor 15-like [Cucurbita moschata] >KAG6597560.1 GATA transcription factor 15, partial [Cucurbita argyrosperma subsp. sororia] >KAG7029005.1 GATA transcription factor 15, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 249 bits (635), Expect = 2.36e-82
Identity = 135/150 (90.00%), Postives = 142/150 (94.67%), Query Frame = 0


Query: 1   MMMDPSDRGSESEDISGKNSSGVSSEESQVNEQNKKTCADCGTSKTPLWRGGPAGPKSLC 60
           MMMDPSDR SESEDIS KNS GVSSEESQVNEQNKKTCADCGTSKTPLWRGGPAGPKSLC
Sbjct: 1   MMMDPSDRVSESEDISSKNSGGVSSEESQVNEQNKKTCADCGTSKTPLWRGGPAGPKSLC 60

Query: 61  NACGIRSRKKRRAILGLSKGVVEDKKNKKSSNIS--SNSKFRDSLKQRLLALGREVLMQR 120
           NACGIRSRKKRRAILGLSKGVVEDKKNK+S++ +  SNSK RDSLKQRL+ALGREVLMQR
Sbjct: 61  NACGIRSRKKRRAILGLSKGVVEDKKNKRSNSCNNISNSKLRDSLKQRLMALGREVLMQR 120

Query: 121 STVERQRKKLGEEEQAAVLLMALSCGSVYA 148
           S+VERQRKKLGEEEQAAVLLMALS GSV+A
Sbjct: 121 SSVERQRKKLGEEEQAAVLLMALSYGSVFA 150

[Close]

BLAST of Chy6G112660 vs. TAIR 10
Match: AT3G06740.1 (GATA transcription factor 15 )

HSP 1 Score: 147.9 bits (372), Expect = 6.5e-36
Identity = 96/155 (61.94%), Postives = 112/155 (72.26%), Query Frame = 0


Query: 2   MMDPSDRGSESEDISGKNSSGVSSEESQVNEQN------KKTCADCGTSKTPLWRGGPAG 61
           M+DP+++  +SE +  K +S  + EE   +  N      KK+CA CGTSKTPLWRGGPAG
Sbjct: 1   MLDPTEKVIDSESMESKLTSVDAIEEHSSSSSNEAISNEKKSCAICGTSKTPLWRGGPAG 60

Query: 62  PKSLCNACGIRSRKKRRAILGLSKGVVEDKKNKKSSNISSNSKFRDSLKQRLLALGREVL 121
           PKSLCNACGIR+RKKRR ++       EDKK KKS N   N KF DSLKQRL+ LGREV+
Sbjct: 61  PKSLCNACGIRNRKKRRTLISNRS---EDKK-KKSHN--RNPKFGDSLKQRLMELGREVM 120

Query: 122 MQRSTVERQRK-KLGEEEQAAVLLMALS-CGSVYA 149
           MQRST E QR+ KLGEEEQAAVLLMALS   SVYA
Sbjct: 121 MQRSTAENQRRNKLGEEEQAAVLLMALSYASSVYA 149

[Close]

BLAST of Chy6G112660 vs. TAIR 10
Match: AT5G49300.1 (GATA transcription factor 16 )

HSP 1 Score: 144.1 bits (362), Expect = 9.3e-35
Identity = 88/149 (59.06%), Postives = 108/149 (72.48%), Query Frame = 0


Query: 2   MMDPSDRG--SESEDISGKNSSGVSSEESQVNEQNKKTCADCGTSKTPLWRGGPAGPKSL 61
           M+D S++    +SE +  +    +    + VN++ KKTCADCGTSKTPLWRGGP GPKSL
Sbjct: 1   MLDHSEKVLLVDSETMKTRAEDMIEQNNTSVNDK-KKTCADCGTSKTPLWRGGPVGPKSL 60

Query: 62  CNACGIRSRKKRRAILGLSKGVVEDKKNKKSSNISSNSKFRDSLKQRLLALGREVLMQRS 121
           CNACGIR+RKKRR       G  ++KK KKSS+   N KF +SLKQ L+ LG   + +RS
Sbjct: 61  CNACGIRNRKKRRG------GTEDNKKLKKSSSGGGNRKFGESLKQSLMDLG---IRKRS 120

Query: 122 TVERQRKKLGEEEQAAVLLMALSCGSVYA 149
           TVE+QR+KLGEEEQAAVLLMALS GSVYA
Sbjct: 121 TVEKQRQKLGEEEQAAVLLMALSYGSVYA 139

[Close]

BLAST of Chy6G112660 vs. TAIR 10
Match: AT3G16870.1 (GATA transcription factor 17 )

HSP 1 Score: 115.2 bits (287), Expect = 4.6e-26
Identity = 80/180 (44.44%), Postives = 100/180 (55.56%), Query Frame = 0


Query: 7   DRGSESEDISGKNSSGVSSEESQVNEQNKKTCADCGTSKTPLWRGGPAGPKSLCNACGIR 66
           D   E  D+  +N S   S     +   K+TC DCGT +TPLWRGGPAGPKSLCNACGI+
Sbjct: 13  DSAGELSDVDNENCSSSGSGGGSSSGDTKRTCVDCGTIRTPLWRGGPAGPKSLCNACGIK 72

Query: 67  SRKKRRAILGLSKGVVEDKKNKKS-----------------------------------S 126
           SRKKR+A LG+     E KKN+KS                                   +
Sbjct: 73  SRKKRQAALGMRS--EEKKKNRKSNCNNDLNLDHRNAKKYKINIVDDGKIDIDDDPKICN 132

Query: 127 NISSNSKFRDSLKQRLLALGREV-LMQRSTVERQR--KKLGEEEQAAVLLMALSCGSVYA 149
           N  S+S   +    + L LG +V +M+RS VE++R  +KLGEEE+AAVLLMALSC SVYA
Sbjct: 133 NKRSSSSSSNKGVSKFLDLGFKVPVMKRSAVEKKRLWRKLGEEERAAVLLMALSCSSVYA 190

[Close]

BLAST of Chy6G112660 vs. TAIR 10
Match: AT4G16141.1 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 102.8 bits (255), Expect = 2.4e-22
Identity = 78/190 (41.05%), Postives = 98/190 (51.58%), Query Frame = 0


Query: 7   DRGSESEDISGKNSSGVSSEESQVNEQNKKTCADCGTSKTPLWRGGPAGPKSLCNACGIR 66
           +   +S D+   N S   S         KKTC DCGTS+TPLWRGGPAGPKSLCNACGI+
Sbjct: 13  ESAGDSSDVDNGNCSSSGS-----GGDTKKTCVDCGTSRTPLWRGGPAGPKSLCNACGIK 72

Query: 67  SRKKRRAILG--------------------------------------------LSKGVV 126
           SRKKR+A LG                                            ++KG  
Sbjct: 73  SRKKRQAALGIRQDDIKIKSKSNNNLGLESRNVKTGKGEPVNVKIAKCEPGIVKIAKGEP 132

Query: 127 EDKKNK-----KSSNISSNSKFRDSLKQRLLALGREV-LMQRSTVERQR--KKLGEEEQA 145
            + KNK     ++S+ S+N+K       R L  G +V  M+RS VE++R  +KLGEEE+A
Sbjct: 133 GNVKNKIKRDPENSSSSNNNKKNVKRVGRFLDFGFKVPAMKRSAVEKKRLWRKLGEEERA 192

[Close]

BLAST of Chy6G112660 vs. TAIR 10
Match: AT5G26930.1 (GATA transcription factor 23 )

HSP 1 Score: 78.6 bits (192), Expect = 4.8e-15
Identity = 51/129 (39.53%), Postives = 70/129 (54.26%), Query Frame = 0


Query: 20  SSGVSSEESQVNEQNKKTCADCGTSKTPLWRGGPAGPKSLCNACGIRSRKKRRAILGLSK 79
           SS   S   +  +   + C++C T+KTP+WRGGP GPKSLCNACGIR RK+RR+ L L  
Sbjct: 10  SSSYVSVRMKEEKGTIRCCSECKTTKTPMWRGGPTGPKSLCNACGIRHRKQRRSEL-LGI 69

Query: 80  GVVEDKKNKKSSNISSNSKFRDSLKQRLLALGREVLMQRSTVERQRKKLGEEEQAAVLLM 139
            ++   K+  S  I+  S     +                   ++R+ L EEEQAA+ L+
Sbjct: 70  HIIRSHKSLASKKINLLSSSHGGV-----------------AVKKRRSLKEEEQAALCLL 120

Query: 140 ALSCGSVYA 149
            LSC SV A
Sbjct: 130 LLSCSSVLA 120

The following BLAST results are available for this feature:

BLAST of Chy6G112660 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LG10	9.1e-35	61.94	GATA transcription factor 15 OS=Arabidopsis thaliana OX=3702 GN=GATA15 PE=2 SV=2	[more]
Q9FJ10	1.3e-33	59.06	GATA transcription factor 16 OS=Arabidopsis thaliana OX=3702 GN=GATA16 PE=2 SV=1	[more]
Q9LIB5	6.5e-25	44.44	GATA transcription factor 17 OS=Arabidopsis thaliana OX=3702 GN=GATA17 PE=2 SV=1	[more]
Q8LC59	6.8e-14	39.53	GATA transcription factor 23 OS=Arabidopsis thaliana OX=3702 GN=GATA23 PE=2 SV=2	[more]
Q9SZI6	5.4e-11	33.52	Putative GATA transcription factor 22 OS=Arabidopsis thaliana OX=3702 GN=GATA22 ...	[more]

BLAST of Chy6G112660 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L942	6.3e-71	99.32	GATA-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G165640 P...	[more]
A0A5A7U5C0	1.2e-69	98.64	GATA transcription factor 16-like OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A1S3AXI2	1.2e-69	98.64	GATA transcription factor 16-like OS=Cucumis melo OX=3656 GN=LOC103483877 PE=4 S...	[more]
A0A6J1C7L6	3.3e-64	92.76	GATA transcription factor 16-like OS=Momordica charantia OX=3673 GN=LOC111009131...	[more]
A0A6J1GF07	3.1e-62	90.67	GATA transcription factor 15-like OS=Cucurbita moschata OX=3662 GN=LOC111453593 ...	[more]

BLAST of Chy6G112660 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004134235.1	8.11e-94	99.32	GATA transcription factor 16 [Cucumis sativus] >KGN57147.1 hypothetical protein ...	[more]
XP_008438922.1	3.73e-92	98.64	PREDICTED: GATA transcription factor 16-like [Cucumis melo] >KAA0049527.1 GATA t...	[more]
XP_038877875.1	2.82e-87	95.27	GATA transcription factor 15-like [Benincasa hispida]	[more]
XP_022137770.1	6.47e-85	92.76	GATA transcription factor 16-like [Momordica charantia]	[more]
XP_022950506.1	2.36e-82	90.00	GATA transcription factor 15-like [Cucurbita moschata] >KAG6597560.1 GATA transc...	[more]

BLAST of Chy6G112660 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G06740.1	6.5e-36	61.94	GATA transcription factor 15	[more]
AT5G49300.1	9.3e-35	59.06	GATA transcription factor 16	[more]
AT3G16870.1	4.6e-26	44.44	GATA transcription factor 17	[more]
AT4G16141.1	2.4e-22	41.05	GATA type zinc finger transcription factor family protein	[more]
AT5G26930.1	4.8e-15	39.53	GATA transcription factor 23	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000679	Zinc finger, GATA-type	SMART	SM00401	GATA_3	coord: 32..96 e-value: 5.3E-13 score: 59.2
IPR000679	Zinc finger, GATA-type	PFAM	PF00320	GATA	coord: 38..72 e-value: 8.6E-17 score: 60.4
IPR000679	Zinc finger, GATA-type	PROSITE	PS00344	GATA_ZN_FINGER_1	coord: 38..63
IPR000679	Zinc finger, GATA-type	PROSITE	PS50114	GATA_ZN_FINGER_2	coord: 32..68 score: 12.347239
IPR000679	Zinc finger, GATA-type	CDD	cd00202	ZnF_GATA	coord: 37..72 e-value: 3.45171E-13 score: 58.5382
IPR013088	Zinc finger, NHR/GATA-type	GENE3D	3.30.50.10		coord: 32..131 e-value: 8.7E-17 score: 62.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 15..41
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..53
None	No IPR available	PANTHER	PTHR47172	OS01G0976800 PROTEIN	coord: 2..148
None	No IPR available	PANTHER	PTHR47172:SF1	OS01G0976800 PROTEIN	coord: 2..148
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 31..72

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy6G112660.1	Chy6G112660.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0008270	zinc ion binding