Chy6G112540 (gene) Cucumber (hystrix) v1

Overview
NameChy6G112540
Typegene
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionUnknown protein
LocationchrH06: 4945500 .. 4950251 (+)
RNA-Seq ExpressionChy6G112540
SyntenyChy6G112540
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAGTTCGCAGGGATCTATCTCGTAATGATCTCCCTATAATTGGATTGGAAGGTTTTGCCCTTATAGAAGAAATCTGCAGCAAACGACTACCAAAGAGGAGACCAAGGCAAGTTGCTCTAGCTCCACCACAATCAATTATAGCAATTCATCCTCCACAAAGGATGGTCGAGTCATCACCGCCTATTCGTTATAATCAATTGGCTAAAACTCAGGAAGGTATTATCATTAAAGAATGTGTGGACGCAAGTCATAGAGAGTGATATGGTAACTCTTTATTTAATCAAGAGTATATATATATATATGTATTTCCATTTGGCATGTTCTGGTTTCTATGTTTGTGTGGAAGCAAGCTTGTAAAGAGTCTAGTAAAACTTATAATGGCTCTGCTTGTAATAAATAAAGTTATCAACTAAGAAGCTTCCTTTGCTATCCTCTATTTGCAACTCTTCATCGTATGTTTCTCTTCTCGAGTCACCTTTAACCTCTTGTTGATCAAGTAGTTGGGTTGACAGTTTTCTTTTAAGCATTTCCTTACATATATGGTTATTAATTTTGCTACAAAACATTTGATTCATATGGAGAATTCCTATTTATTATATTGGTTATAGAAATTTCTACATTCTTTTGTTTCTTCGTATTATATCGGTCCAATTGGATAGTGGCGTAGCATGTAGAGATATTAACAATCGGTACCCCTTGACATCCTAACTCACAATTCAAAGTATATATTGGTATTTAAGGGAGCTTTCACTGTAGAATTTTATTTTTTAAAAAATAAAAACAATATTTTTTTTTCATCACCAATTTATCCTTCTATCAAGTTAATATATATTAGTAGGATTTTCTTATTACTGAGTAGGAGTTCTATGACCATTACGGGTTAAAATAAAGCAACGCGAAAGGAAAAAAATAAAAAAAGAATTCTTTGCATACATACATATATATATATATATAGTTATTTTTAATGGTAGACCTAAATGTACTTAGCTTTAAAGGGTATTTAGTTCTTCATTTTCTATATTTGTTGTACTAAAAAATAATTTTAGAATACATAGTTACATTATTAAATAAACTGAAATTTTATAGTTTGAAGTAGAACCTAATCGATGAAAAATGAATGACTAGTTAACTAAAAAAAATCCAACACTATATATGTACATATTATAATATCAACTTTATTTAAAATTCTTGTTAGAAAGAAATTCTCCCCGCAAATATTTTCACTAAATTCTTTTATTAATATTTAAAAAGAAAGACTTGCTAAAAAATATACAATAATTATTTCAAAACTTATTGTTTTAAATATTATAATACTTAATTTTCTTAAATATAACAAACAATCAAAATATTTAGAGGAGCACGTCAAAATGAAAAAGTTGATTAAGTTTACTATTTTTGAAAAATATTACAGATTTGTCATTTCTTTTCGTCATCTTTCTCTCTTCCTCTTTTGCAGTTTTTTTTCTCCATCGTCTTTCTTCTCTTCTTCTACTATTTTTCTTTCTTCTTCTGTCATTTGTATTTTTATTTTTTTTCAAACTGTTATTTGGTTCAAGATCGTGTATCAAATATGATTTGGCTAAATCTAAACGATTGTATACTCAAATCTAATCGATCGTGTACCAAATAATCTTTAAAAAATCGTTTAAATTTTGGTAGTTAAATTTAAACGATTAAATCTAAACAATCGTTTACTAAATATAAACGATTATGTATCAAAATATAAACGATCGTGTACCAAAAAATACTGAAAAATCGTTGAAACAAGTGTATAACAAAAAATCTTGAAAAAAAAAATTGTTTTGATTTGGCTCCAAATCTAAACGATCATGTAGGAAATAATTGTTAAATGTAAACGATCGTTTTTCAAATATATTACGTATACTAGATGCCAATAAATCACGGAGCATTTTTGGTATTTTTCATTGTGAGACTATGGACTTGGATTTTTTTCGTTTTTGAAAGTTTCCTATAAAGTATAAATATTTTAGCATTTTGTTATGTTTTTTAAAAAACTCCTATTATAATTGGGCCATGTCTCTTCAAAAGAGATGATAATGGTTAAATTTATTATGTAAAAAAATGGATTCTAGTCTAAATCAATTGAGAATGTAGAAGTGTTTGGTGACTCGTAATAAAATTGATTTGTATTGTAATATAATTTAAAATTCATGTTTGAATTGAGCGTTTTAGGTTCAATCTTTAATATGAAATTCATTTTATATTATGACAGTTTTCAATTCTTTCTTACTCTTTTCACGATCTCATATTTTAATTGGAGGAATGGCTAAGGATATCAATTTAGTTTAACTTTTTCGAAAGTTTAATTTTGAAAACCATTTTATTAACATTTGAATAGTTGGATAATGGTTCAAAAACAACTTTTAAAATTTATTTTAAACAATTGTTAAGTTTAAATAAAAACGATGTGCTTAACTTATAATTAAATTCGGATGTATATATTGTATTTTATTTGTAAGAAGGATAAAGAAAAAAGAGAGAGAATTAAGTTTTGTACTACTTTCAAAGGCTTAACTCTGGACCTTACACTTCTAATACATCTTAAGATTTGTCTTTTTGATGATAAAAAAAACTAGTTTTTATGTAGGGAAGAAATAGAACAAATTTAAATGATGTTGTTCTTGTTATTGGATTAAGAAGTAAGGGGAGTGAGACTTTATAACAAATATGGTAGTGACATGTACTAAAAAACGGTACACTAATAATTAAAAGTATAGTAATAATTGTAGTTACGTAGTAATAGAACTAAATATGAGTTTTGTCATATTTATAAATGTCTCTACATTGTGCTAAAGTGTTGTAAGTTTTATAACGATATTTATAATTGTTCCTAAAATTTATTAAGATATACTAATCTTTATGTGCTTGCTTTCATTACAACACATATATAAAAAAAAAGGAATTATAATATTCTAAAGAAGAAGTAAAATGCACATAGATAATTGGAATGTGTCATATTATTCTTTTAATTTAGAAGAGTACTTTTTATTCTATGAGTTTTGAATTTAATTTCTATGTACTTTTCATGATGGAAAGTATAAATTTATATATTTAAAAAAAAAAGAAATTAATAGTGAAAAGTTTTAATTGATACAATACAAAATTTGAAGGTAAATATAGTAAAACTGAGTTCACTTGTTTACAAAACTAGCAAAATTTTAAGTTATATCTATGAAAAGCATGATAGATTCGTATTAACATTTATTACTTTGGTGATAGATACAATGACATGTGTCTATCTGAATCTATTTTTATCTATCGATAATACAGAGTAAAATAATTTGTAAATATTATCTCAAGTTCTGTCGGTATTAAGTAAAAAGTAAAAATATGAAAATAAGAATCGAAGTTAAAAATGAAAAAAAAAAAAAAAAAATCCTACCAACTTTGTTCTTTGTTCTTTGTTTTTGAAAAGACGAGTCAATGCAAAGATTAAACAGAATATATCCCTTTCTCGGTTTCTCAATTTTGGGTATGCTCAACTTGTTGGCAAAGTAATTAATTACCAAGTGTTTGCTTTGTTTTTGTTTTTTTTTCCTTTTCAATTTACTTCCACTTTAATTTTTTCATAAGTGATTATTAAAATTGGTTTGATAAATGTCTAGGAAGTGTTTAACAACCAACGTGTAATTGAGTTGCATAAGTAAAAAAATTCACCCACCATTTAAGTGTACCAACAATTCAAGAGATTTAATTAACTTATATTTTTTATCGCATTATTCATGTCAACTCTCTTAATTACTCTTACTTATAATAATTACCAACTCAACGCAACAATTAAAAAACAATTCTAACTAAATATCCTCTCGATAAATATAAAATTTAAAGGAACAATATTAATCTCAATATCATAGACATACTAAATAGGTCAATAAAATTCCTCCACTATCCCTATATAGAAGAACATCTCCAACTACTTTATTCTCAATCTAAACTAAGTACCATATGCAGATATTTTTCAATTATTGGTAACACAAACAATATTATAAATAAACTAACTCAATCAAAGGATACCTTTTTTTTATACTTTGAACGTCTATATAATAATTACAATTTTTTTTTAATGTATATAGATCTAGATGAACCCAACAAATATACTCCCACTTACAAAATCTAATTAAAAAAATTATTTTCTACTAGTTTAACCTTTTATTTAATGAAAATAAAAAGCTCTTCAAGTATACATTCCAATGAGAGTCAAGTATACATTCTAATGGAAGCACCGAAAGTCTAAAGATTATTCCACAAATAATTTGAAAGAATAATAATCTTTCAAAACGATTATTCTTGGTAGAACAAATTCCAATTTTCTTAGCTTATTGAGAGATAAAGTAATTTCCAACAAATTGGTAAGCCCAACCATTTCCAAAGTTTTTTTTTTATATATAAATAGTGGTTAACCTTCTTTATTTTCTATCCCCAAACCAAGAAAACCTAACCTTAAGAACACACAAGGTGCCATGGCAGCTCGTAACGATCTCGCTAGAATTGGATTGGAAGGCTTTGTCTTTATAGAAGAACTCTACGACCGACCGAGAAGGAAGCCGAGGCATGTTGCTCCAGCTCCGCCGCAACCAGTCGTAACAATTCATCCTCCACAAAGGAAGGTCGAGTCATCACCACCTGTTCGTTGTGATCAATTAGCTAAAGCTCACGGAGGTATTATCATTAAAGAATGGGGTGGAAAGCGAGTCAACAAACTTGTCCAAAAAACAGAGAGACCATAA

mRNA sequence

ATGGCAGTTCGCAGGGATCTATCTCGTAATGATCTCCCTATAATTGGATTGGAAGGTTTTGCCCTTATAGAAGAAATCTGCAGCAAACGACTACCAAAGAGGAGACCAAGGCAAGTTGCTCTAGCTCCACCACAATCAATTATAGCAATTCATCCTCCACAAAGGATGGTCGAGTCATCACCGCCTATTCGTTATAATCAATTGGCTAAAACTCAGGAAGGTGCCATGGCAGCTCGTAACGATCTCGCTAGAATTGGATTGGAAGGCTTTGTCTTTATAGAAGAACTCTACGACCGACCGAGAAGGAAGCCGAGGCATGTTGCTCCAGCTCCGCCGCAACCAGTCGTAACAATTCATCCTCCACAAAGGAAGGTCGAGTCATCACCACCTGTTCGTTGTGATCAATTAGCTAAAGCTCACGGAGGTATTATCATTAAAGAATGGGGTGGAAAGCGAGTCAACAAACTTGTCCAAAAAACAGAGAGACCATAA

Coding sequence (CDS)

ATGGCAGTTCGCAGGGATCTATCTCGTAATGATCTCCCTATAATTGGATTGGAAGGTTTTGCCCTTATAGAAGAAATCTGCAGCAAACGACTACCAAAGAGGAGACCAAGGCAAGTTGCTCTAGCTCCACCACAATCAATTATAGCAATTCATCCTCCACAAAGGATGGTCGAGTCATCACCGCCTATTCGTTATAATCAATTGGCTAAAACTCAGGAAGGTGCCATGGCAGCTCGTAACGATCTCGCTAGAATTGGATTGGAAGGCTTTGTCTTTATAGAAGAACTCTACGACCGACCGAGAAGGAAGCCGAGGCATGTTGCTCCAGCTCCGCCGCAACCAGTCGTAACAATTCATCCTCCACAAAGGAAGGTCGAGTCATCACCACCTGTTCGTTGTGATCAATTAGCTAAAGCTCACGGAGGTATTATCATTAAAGAATGGGGTGGAAAGCGAGTCAACAAACTTGTCCAAAAAACAGAGAGACCATAA

Protein sequence

MAVRRDLSRNDLPIIGLEGFALIEEICSKRLPKRRPRQVALAPPQSIIAIHPPQRMVESSPPIRYNQLAKTQEGAMAARNDLARIGLEGFVFIEELYDRPRRKPRHVAPAPPQPVVTIHPPQRKVESSPPVRCDQLAKAHGGIIIKEWGGKRVNKLVQKTERP*
Homology
[Close]
BLAST of Chy6G112540 vs. ExPASy TrEMBL
Match: A0A0A0L5A8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G164540 PE=4 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 8.2e-40
Identity = 83/89 (93.26%), Postives = 86/89 (96.63%), Query Frame = 0 

Query: 76  MAAR-NDLARIGLEGFVFIEELYDRPRRKPRHVAPAPPQPVVTIHPPQRKVESSPPVRCD 135
           MAAR NDLARIGLEGF+FIEELYDRPRRKPRHVAPAPPQPVV IHPPQRKVESSP +RCD
Sbjct: 1   MAARNNDLARIGLEGFIFIEELYDRPRRKPRHVAPAPPQPVVAIHPPQRKVESSPSIRCD 60

Query: 136 QLAKAHGGIIIKEWGGKRVNKLVQKTERP 164
           QLAKAHGGIIIKEWGGKRVNK+VQKTERP
Sbjct: 61  QLAKAHGGIIIKEWGGKRVNKVVQKTERP 89

[Close]
BLAST of Chy6G112540 vs. ExPASy TrEMBL
Match: A0A5A7U5Q5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold209G001240 PE=4 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 2.0e-30
Identity = 66/80 (82.50%), Postives = 71/80 (88.75%), Query Frame = 0 

Query: 78  ARNDLARIGLEGFVFIEELYDRPRRKPRHVAPAPPQPVVTIHPPQRKVESSPPVRCDQLA 137
           ARNDLARIG+E F  IEE YDRPRR+PR V PAPPQPVV I PP+R VESSPP+RCDQLA
Sbjct: 8   ARNDLARIGVEAFALIEEHYDRPRRRPRQVVPAPPQPVVAIQPPKRMVESSPPIRCDQLA 67

Query: 138 KAHGGIIIKEWGGKRVNKLV 158
           KAHGGIIIKEWGGKRVNK+V
Sbjct: 68  KAHGGIIIKEWGGKRVNKVV 87

[Close]
BLAST of Chy6G112540 vs. ExPASy TrEMBL
Match: A0A0A0L7Z0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G164530 PE=4 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 1.4e-26
Identity = 66/74 (89.19%), Postives = 66/74 (89.19%), Query Frame = 0 

Query: 1  MAVRRDLSRNDLPIIGLEGFALIEEICSKRLPKRRPRQVALAPPQSIIAIHPPQRMVESS 60
          MA  RDLSRNDLP IGLEGFALIEEI  KRLPKRRPRQVALAPPQSIIAIHPPQRM ESS
Sbjct: 1  MAAHRDLSRNDLPKIGLEGFALIEEIYCKRLPKRRPRQVALAPPQSIIAIHPPQRMAESS 60

Query: 61 PPIRYNQLAKTQEG 75
          PPIR NQLAKT EG
Sbjct: 61 PPIRCNQLAKTHEG 74

[Close]
BLAST of Chy6G112540 vs. NCBI nr
Match: KGN57135.1 (hypothetical protein Csa_010300 [Cucumis sativus])

HSP 1 Score: 169 bits (427), Expect = 2.87e-51
Identity = 83/89 (93.26%), Postives = 86/89 (96.63%), Query Frame = 0 

Query: 76  MAARN-DLARIGLEGFVFIEELYDRPRRKPRHVAPAPPQPVVTIHPPQRKVESSPPVRCD 135
           MAARN DLARIGLEGF+FIEELYDRPRRKPRHVAPAPPQPVV IHPPQRKVESSP +RCD
Sbjct: 1   MAARNNDLARIGLEGFIFIEELYDRPRRKPRHVAPAPPQPVVAIHPPQRKVESSPSIRCD 60

Query: 136 QLAKAHGGIIIKEWGGKRVNKLVQKTERP 163
           QLAKAHGGIIIKEWGGKRVNK+VQKTERP
Sbjct: 61  QLAKAHGGIIIKEWGGKRVNKVVQKTERP 89

[Close]
BLAST of Chy6G112540 vs. NCBI nr
Match: KAA0049516.1 (hypothetical protein E6C27_scaffold171G007700 [Cucumis melo var. makuwa] >TYK16196.1 hypothetical protein E5676_scaffold209G001240 [Cucumis melo var. makuwa])

HSP 1 Score: 137 bits (346), Expect = 5.62e-39
Identity = 66/80 (82.50%), Postives = 71/80 (88.75%), Query Frame = 0 

Query: 78  ARNDLARIGLEGFVFIEELYDRPRRKPRHVAPAPPQPVVTIHPPQRKVESSPPVRCDQLA 137
           ARNDLARIG+E F  IEE YDRPRR+PR V PAPPQPVV I PP+R VESSPP+RCDQLA
Sbjct: 8   ARNDLARIGVEAFALIEEHYDRPRRRPRQVVPAPPQPVVAIQPPKRMVESSPPIRCDQLA 67

Query: 138 KAHGGIIIKEWGGKRVNKLV 157
           KAHGGIIIKEWGGKRVNK+V
Sbjct: 68  KAHGGIIIKEWGGKRVNKVV 87

[Close]
BLAST of Chy6G112540 vs. NCBI nr
Match: KGN57134.1 (hypothetical protein Csa_010351 [Cucumis sativus])

HSP 1 Score: 128 bits (322), Expect = 1.91e-35
Identity = 66/74 (89.19%), Postives = 66/74 (89.19%), Query Frame = 0 

Query: 1  MAVRRDLSRNDLPIIGLEGFALIEEICSKRLPKRRPRQVALAPPQSIIAIHPPQRMVESS 60
          MA  RDLSRNDLP IGLEGFALIEEI  KRLPKRRPRQVALAPPQSIIAIHPPQRM ESS
Sbjct: 1  MAAHRDLSRNDLPKIGLEGFALIEEIYCKRLPKRRPRQVALAPPQSIIAIHPPQRMAESS 60

Query: 61 PPIRYNQLAKTQEG 74
          PPIR NQLAKT EG
Sbjct: 61 PPIRCNQLAKTHEG 74

[Close]
BLAST of Chy6G112540 vs. NCBI nr
Match: KAG6575082.1 (hypothetical protein SDJN03_25721, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 57.0 bits (136), Expect = 2.04e-07
Identity = 35/77 (45.45%), Postives = 46/77 (59.74%), Query Frame = 0 

Query: 76  MAARNDLARIGLEGFVFIEELYDR--PRRKPRHVAPAPPQ-PVVTIHPPQRKVESSP-PV 135
           MA R DLA+IG EGF  I+E + R    R+P    PA PQ P     PP++  E  P PV
Sbjct: 1   MAPRADLAKIGREGFELIDEYFGRVPATRRPAVARPALPQAPCKAEQPPRKMREKLPVPV 60

Query: 136 RCDQLAKAHGGIIIKEW 148
            C+Q+A+A GG++I  W
Sbjct: 61  NCNQVARARGGVVITTW 77

[Close]
BLAST of Chy6G112540 vs. NCBI nr
Match: KAG6575081.1 (hypothetical protein SDJN03_25720, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 54.7 bits (130), Expect = 1.68e-06
Identity = 37/80 (46.25%), Postives = 45/80 (56.25%), Query Frame = 0 

Query: 76  MAARNDLARIGLEGFVFIEELYDRPRRKPRHVA-----PAPPQ-PVVTIHPPQRKVESSP 135
           MA R DLA+IG EGF  I+E + R     R  A     PA PQ P     PP++K E  P
Sbjct: 1   MARRGDLAKIGREGFDLIDEYFGRAPATRRAAAVAAARPALPQAPCKAEQPPRKKREKMP 60

Query: 136 -PVRCDQLAKAHGGIIIKEW 148
             V C+Q+AKA GGI+I  W
Sbjct: 61  VAVNCNQVAKARGGIVITTW 80

The following BLAST results are available for this feature:
BLAST of Chy6G112540 vs.
Match NameE-valueIdentityDescription
BLAST of Chy6G112540 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L5A88.2e-4093.26Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G164540 PE=4 SV=1[more]
A0A5A7U5Q52.0e-3082.50Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0L7Z01.4e-2689.19Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G164530 PE=4 SV=1[more]
BLAST of Chy6G112540 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN57135.12.87e-5193.26hypothetical protein Csa_010300 [Cucumis sativus][more]
KAA0049516.15.62e-3982.50hypothetical protein E6C27_scaffold171G007700 [Cucumis melo var. makuwa] >TYK161... [more]
KGN57134.11.91e-3589.19hypothetical protein Csa_010351 [Cucumis sativus][more]
KAG6575082.12.04e-0745.45hypothetical protein SDJN03_25721, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG6575081.11.68e-0646.25hypothetical protein SDJN03_25720, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of Chy6G112540 vs. NCBI nr
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33484FAMILY NOT NAMEDcoord: 76..152
coord: 9..70

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Chy6G112540.1Chy6G112540.1mRNA