Chy6G112460 (gene) Cucumber (hystrix) v1

Overview


Name	Chy6G112460
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Dynein light chain
Location	chrH06: 4891390 .. 4892044 (+)
RNA-Seq Expression	Chy6G112460
Synteny	Chy6G112460

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACCAAGATTCTCGCCGCGCCACCAATCATCCTCCACCTCCAATTGTGAAGCTTGAATCTACAGATGATCGCAAACCCTCATCTCCCGCTCCCCTCTCCAAGAAAATCGTCATCAAGAGCGCCGATATGTTCACTGACATGCAGAAGGAGGCTATTGACACTGCCATAGCCGTCAGTGCTTCTACCTCCCTCTTCTTCTCTTTATTTTTCTCTTTTCATTCCTTCATAATCTCTTTCGTTTTTAGGCATTTGAGAAACATTCCGTTGAGAAGGATATTGCCGAACAGATAAAGAAAGAGTTTGATAAGAATCATGGACCCACCTGGCATTGCATCGTCGGTCGTAATTTTGGTACCTTCTTTCACTCTCTATCTCTATTTCTTTACCTTCCTGCTTCATTTTCGCTTTCTTTCACTCTGATGTACTGAATCTCTGTTCATTTCTCTAACTTTATGCTCTCTTTGGAAATGCTTCTCTTAATTCAACTTCAATCTACGGAAATTGAGATCTAGCTGTTTGTTTATTTTTTTTTTCCCGGTGAACAATTAGATGGAGATTGGAGTAGGATGTTTTTCTTCGGGATTCTGATACCGTTAGCTTGGTTATTCTTTCAGGCTCTACCACTAAGCAGAAGCAAGATTTGTCTGCATAG

mRNA sequence

ATGAACCAAGATTCTCGCCGCGCCACCAATCATCCTCCACCTCCAATTGTGAAGCTTGAATCTACAGATGATCGCAAACCCTCATCTCCCGCTCCCCTCTCCAAGAAAATCGTCATCAAGAGCGCCGATATGTTCACTGACATGCAGAAGGAGGCTATTGACACTGCCATAGCCGCATTTGAGAAACATTCCGTTGAGAAGGATATTGCCGAACAGATAAAGAAAGAGTTTGATAAGAATCATGGACCCACCTGGCATTGCATCGTCGGTCGCTCTACCACTAAGCAGAAGCAAGATTTGTCTGCATAG

Coding sequence (CDS)

ATGAACCAAGATTCTCGCCGCGCCACCAATCATCCTCCACCTCCAATTGTGAAGCTTGAATCTACAGATGATCGCAAACCCTCATCTCCCGCTCCCCTCTCCAAGAAAATCGTCATCAAGAGCGCCGATATGTTCACTGACATGCAGAAGGAGGCTATTGACACTGCCATAGCCGCATTTGAGAAACATTCCGTTGAGAAGGATATTGCCGAACAGATAAAGAAAGAGTTTGATAAGAATCATGGACCCACCTGGCATTGCATCGTCGGTCGCTCTACCACTAAGCAGAAGCAAGATTTGTCTGCATAG

Protein sequence

MNQDSRRATNHPPPPIVKLESTDDRKPSSPAPLSKKIVIKSADMFTDMQKEAIDTAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRSTTKQKQDLSA*

Homology

[Close]

BLAST of Chy6G112460 vs. ExPASy Swiss-Prot
Match: Q22799 (Dynein light chain 1, cytoplasmic OS=Caenorhabditis elegans OX=6239 GN=dlc-1 PE=1 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 1.9e-15
Identity = 38/60 (63.33%), Postives = 48/60 (80.00%), Query Frame = 0


Query: 33 LSKKIVIKSADMFTDMQKEAIDTAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRS 92
          + +K VIK+ADM  DMQ++AID A  A EK+++EKDIA  IKKEFDK + PTWHCIVGR+
Sbjct: 2  VDRKAVIKNADMSDDMQQDAIDCATQALEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRN 61

[Close]

BLAST of Chy6G112460 vs. ExPASy Swiss-Prot
Match: Q3MHR3 (Dynein light chain 2, cytoplasmic OS=Bos taurus OX=9913 GN=DYNLL2 PE=3 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 3.2e-15
Identity = 37/58 (63.79%), Postives = 47/58 (81.03%), Query Frame = 0


Query: 35 KKIVIKSADMFTDMQKEAIDTAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRS 93
          +K VIK+ADM  DMQ++A+D A  A EK+++EKDIA  IKKEFDK + PTWHCIVGR+
Sbjct: 4  RKAVIKNADMSEDMQQDAVDCATQAMEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRN 61

[Close]

BLAST of Chy6G112460 vs. ExPASy Swiss-Prot
Match: Q96FJ2 (Dynein light chain 2, cytoplasmic OS=Homo sapiens OX=9606 GN=DYNLL2 PE=1 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 3.2e-15
Identity = 37/58 (63.79%), Postives = 47/58 (81.03%), Query Frame = 0


Query: 35 KKIVIKSADMFTDMQKEAIDTAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRS 93
          +K VIK+ADM  DMQ++A+D A  A EK+++EKDIA  IKKEFDK + PTWHCIVGR+
Sbjct: 4  RKAVIKNADMSEDMQQDAVDCATQAMEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRN 61

[Close]

BLAST of Chy6G112460 vs. ExPASy Swiss-Prot
Match: Q9D0M5 (Dynein light chain 2, cytoplasmic OS=Mus musculus OX=10090 GN=Dynll2 PE=1 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 3.2e-15
Identity = 37/58 (63.79%), Postives = 47/58 (81.03%), Query Frame = 0


Query: 35 KKIVIKSADMFTDMQKEAIDTAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRS 93
          +K VIK+ADM  DMQ++A+D A  A EK+++EKDIA  IKKEFDK + PTWHCIVGR+
Sbjct: 4  RKAVIKNADMSEDMQQDAVDCATQAMEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRN 61

[Close]

BLAST of Chy6G112460 vs. ExPASy Swiss-Prot
Match: Q78P75 (Dynein light chain 2, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Dynll2 PE=1 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 3.2e-15
Identity = 37/58 (63.79%), Postives = 47/58 (81.03%), Query Frame = 0


Query: 35 KKIVIKSADMFTDMQKEAIDTAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRS 93
          +K VIK+ADM  DMQ++A+D A  A EK+++EKDIA  IKKEFDK + PTWHCIVGR+
Sbjct: 4  RKAVIKNADMSEDMQQDAVDCATQAMEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRN 61

[Close]

BLAST of Chy6G112460 vs. ExPASy TrEMBL
Match: A0A0A0LAM1 (Dynein light chain OS=Cucumis sativus OX=3659 GN=Csa_3G159460 PE=3 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 1.1e-42
Identity = 90/92 (97.83%), Postives = 91/92 (98.91%), Query Frame = 0


Query: 1  MNQDSRRATNHPPPPIVKLESTDDRKPSSPAPLSKKIVIKSADMFTDMQKEAIDTAIAAF 60
          MNQDSRR TNHPPPPIVKLESTDDRKPSSPAPLSKKIVIKSADMFTDMQKEAIDTAIAAF
Sbjct: 1  MNQDSRRPTNHPPPPIVKLESTDDRKPSSPAPLSKKIVIKSADMFTDMQKEAIDTAIAAF 60

Query: 61 EKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRS 93
          EKHSVEKDIAEQIKKEFDKNHGPTWHCIVGR+
Sbjct: 61 EKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRN 92

[Close]

BLAST of Chy6G112460 vs. ExPASy TrEMBL
Match: A0A5D3CY39 (Dynein light chain OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold209G001160 PE=3 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 1.2e-39
Identity = 85/98 (86.73%), Postives = 89/98 (90.82%), Query Frame = 0


Query: 1  MNQDSRRATNHPPPPIVKLESTDDRKPSSPAPLSKKIVIKSADMFTDMQKEAIDTAIAAF 60
          MN +SRR TNHPPP IVK ESTDDRKPSSP+PLSKKIVIKSADMFTDMQKEAID AIAAF
Sbjct: 1  MNLESRRTTNHPPPSIVKTESTDDRKPSSPSPLSKKIVIKSADMFTDMQKEAIDAAIAAF 60

Query: 61 EKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRSTTKQKQ 99
          EKHSVEKDIAEQIKKEFDKNHGPTWHCIVGR+    +Q
Sbjct: 61 EKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFANSQQ 98

[Close]

BLAST of Chy6G112460 vs. ExPASy TrEMBL
Match: A0A1S4DSP2 (Dynein light chain OS=Cucumis melo OX=3656 GN=LOC103483858 PE=3 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 4.4e-39
Identity = 84/92 (91.30%), Postives = 87/92 (94.57%), Query Frame = 0


Query: 1  MNQDSRRATNHPPPPIVKLESTDDRKPSSPAPLSKKIVIKSADMFTDMQKEAIDTAIAAF 60
          MN +SRR TNHPPP IVK ESTDDRKPSSP+PLSKKIVIKSADMFTDMQKEAID AIAAF
Sbjct: 1  MNLESRRTTNHPPPSIVKTESTDDRKPSSPSPLSKKIVIKSADMFTDMQKEAIDAAIAAF 60

Query: 61 EKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRS 93
          EKHSVEKDIAEQIKKEFDKNHGPTWHCIVGR+
Sbjct: 61 EKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRN 92

[Close]

BLAST of Chy6G112460 vs. ExPASy TrEMBL
Match: A0A6J1G0U9 (Dynein light chain OS=Cucurbita moschata OX=3662 GN=LOC111449637 PE=3 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 2.7e-28
Identity = 69/92 (75.00%), Postives = 80/92 (86.96%), Query Frame = 0


Query: 1  MNQDSRRATNHPPPPIVKLESTDDRKPSSPAPLSKKIVIKSADMFTDMQKEAIDTAIAAF 60
          MN DS+R  ++P P +VK ES +DRKPSS AP+ KKIVIKSADMF DMQKEA+D AIAAF
Sbjct: 1  MNHDSKR--SNPSPLMVKPES-EDRKPSSAAPVGKKIVIKSADMFGDMQKEAVDIAIAAF 60

Query: 61 EKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRS 93
          EKHSVEKD+AEQIKKEFDK HGPTWHC++GR+
Sbjct: 61 EKHSVEKDVAEQIKKEFDKRHGPTWHCVIGRN 89

[Close]

BLAST of Chy6G112460 vs. ExPASy TrEMBL
Match: A0A6J1I9I2 (Dynein light chain OS=Cucurbita maxima OX=3661 GN=LOC111472324 PE=3 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 7.7e-28
Identity = 69/95 (72.63%), Postives = 79/95 (83.16%), Query Frame = 0


Query: 1  MNQDSRRATNHPPPPIVKLESTDDRKPSSPAPLSKKIVIKSADMFTDMQKEAIDTAIAAF 60
          MN DS+R+    P  +VK ES +DRKPSS AP+ KKIVIKSADMF DMQKEA+D AIAAF
Sbjct: 1  MNHDSKRSN---PSLMVKPES-EDRKPSSAAPVGKKIVIKSADMFGDMQKEAVDIAIAAF 60

Query: 61 EKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRSTTK 96
          EKHSVEKD+AEQIKKEFDK HGPTWHC++GR+  K
Sbjct: 61 EKHSVEKDVAEQIKKEFDKRHGPTWHCVIGRNFAK 91

[Close]

BLAST of Chy6G112460 vs. NCBI nr
Match: XP_004134221.1 (dynein light chain 1, cytoplasmic [Cucumis sativus] >KGN57126.1 hypothetical protein Csa_011724 [Cucumis sativus])

HSP 1 Score: 185 bits (469), Expect = 2.74e-58
Identity = 90/92 (97.83%), Postives = 91/92 (98.91%), Query Frame = 0


Query: 1  MNQDSRRATNHPPPPIVKLESTDDRKPSSPAPLSKKIVIKSADMFTDMQKEAIDTAIAAF 60
          MNQDSRR TNHPPPPIVKLESTDDRKPSSPAPLSKKIVIKSADMFTDMQKEAIDTAIAAF
Sbjct: 1  MNQDSRRPTNHPPPPIVKLESTDDRKPSSPAPLSKKIVIKSADMFTDMQKEAIDTAIAAF 60

Query: 61 EKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRS 92
          EKHSVEKDIAEQIKKEFDKNHGPTWHCIVGR+
Sbjct: 61 EKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRN 92

[Close]

BLAST of Chy6G112460 vs. NCBI nr
Match: KAA0049508.1 (dynein light chain 1 [Cucumis melo var. makuwa] >TYK16188.1 dynein light chain 1 [Cucumis melo var. makuwa])

HSP 1 Score: 174 bits (442), Expect = 7.20e-54
Identity = 85/98 (86.73%), Postives = 89/98 (90.82%), Query Frame = 0


Query: 1  MNQDSRRATNHPPPPIVKLESTDDRKPSSPAPLSKKIVIKSADMFTDMQKEAIDTAIAAF 60
          MN +SRR TNHPPP IVK ESTDDRKPSSP+PLSKKIVIKSADMFTDMQKEAID AIAAF
Sbjct: 1  MNLESRRTTNHPPPSIVKTESTDDRKPSSPSPLSKKIVIKSADMFTDMQKEAIDAAIAAF 60

Query: 61 EKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRSTTKQKQ 98
          EKHSVEKDIAEQIKKEFDKNHGPTWHCIVGR+    +Q
Sbjct: 61 EKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFANSQQ 98

[Close]

BLAST of Chy6G112460 vs. NCBI nr
Match: XP_016898981.1 (PREDICTED: dynein light chain 1, cytoplasmic-like [Cucumis melo] >XP_016898982.1 PREDICTED: dynein light chain 1, cytoplasmic-like [Cucumis melo] >XP_016898983.1 PREDICTED: dynein light chain 1, cytoplasmic-like [Cucumis melo])

HSP 1 Score: 173 bits (438), Expect = 1.46e-53
Identity = 84/92 (91.30%), Postives = 87/92 (94.57%), Query Frame = 0


Query: 1  MNQDSRRATNHPPPPIVKLESTDDRKPSSPAPLSKKIVIKSADMFTDMQKEAIDTAIAAF 60
          MN +SRR TNHPPP IVK ESTDDRKPSSP+PLSKKIVIKSADMFTDMQKEAID AIAAF
Sbjct: 1  MNLESRRTTNHPPPSIVKTESTDDRKPSSPSPLSKKIVIKSADMFTDMQKEAIDAAIAAF 60

Query: 61 EKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRS 92
          EKHSVEKDIAEQIKKEFDKNHGPTWHCIVGR+
Sbjct: 61 EKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRN 92

[Close]

BLAST of Chy6G112460 vs. NCBI nr
Match: XP_038904701.1 (dynein light chain 1, cytoplasmic-like [Benincasa hispida])

HSP 1 Score: 144 bits (362), Expect = 5.05e-42
Identity = 75/92 (81.52%), Postives = 83/92 (90.22%), Query Frame = 0


Query: 1  MNQDSRRATNHPPPPIVKLESTDDRKPSSPAPLSKKIVIKSADMFTDMQKEAIDTAIAAF 60
          MNQ+S R+  +PPP +VK ES DDRKPSS A +SKKIVIKSADMF+DMQKEAID AIAAF
Sbjct: 1  MNQESHRS--NPPPLMVKPES-DDRKPSSAAAVSKKIVIKSADMFSDMQKEAIDIAIAAF 60

Query: 61 EKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRS 92
          EKHSVEKDIAEQIKK+FDKNHGPTWHCIVGR+
Sbjct: 61 EKHSVEKDIAEQIKKQFDKNHGPTWHCIVGRN 89

[Close]

BLAST of Chy6G112460 vs. NCBI nr
Match: KAG7028990.1 (Dynein light chain 1, cytoplasmic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 137 bits (345), Expect = 1.07e-39
Identity = 69/92 (75.00%), Postives = 80/92 (86.96%), Query Frame = 0


Query: 1  MNQDSRRATNHPPPPIVKLESTDDRKPSSPAPLSKKIVIKSADMFTDMQKEAIDTAIAAF 60
          MN DS+R+  +P P +VK ES +DRKPSS AP+ KKIVIKSADMF DMQKEA+D AIAAF
Sbjct: 1  MNHDSKRS--NPSPLMVKPES-EDRKPSSAAPVGKKIVIKSADMFGDMQKEAVDIAIAAF 60

Query: 61 EKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRS 92
          EKHSVEKD+AEQIKKEFDK HGPTWHC++GR+
Sbjct: 61 EKHSVEKDVAEQIKKEFDKRHGPTWHCVIGRN 89

[Close]

BLAST of Chy6G112460 vs. TAIR 10
Match: AT4G15930.1 (Dynein light chain type 1 family protein )

HSP 1 Score: 99.8 bits (247), Expect = 1.4e-21
Identity = 52/75 (69.33%), Postives = 58/75 (77.33%), Query Frame = 0


Query: 23 DDRKPSSP-----APLSKKIVIKSADMFTDMQKEAIDTAIAAFEKHSVEKDIAEQIKKEF 82
          DDR+ S P      P  K+ VIKSADM  DMQKEAI+ AI+AFEK+SVEKDIAE IKKEF
Sbjct: 21 DDRRSSLPEVEASPPAGKRAVIKSADMKDDMQKEAIEIAISAFEKYSVEKDIAENIKKEF 80

Query: 83 DKNHGPTWHCIVGRS 93
          DK HG TWHCIVGR+
Sbjct: 81 DKKHGATWHCIVGRN 95

[Close]

BLAST of Chy6G112460 vs. TAIR 10
Match: AT5G20110.1 (Dynein light chain type 1 family protein )

HSP 1 Score: 46.2 bits (108), Expect = 1.8e-05
Identity = 28/57 (49.12%), Postives = 34/57 (59.65%), Query Frame = 0


Query: 39  IKSADMFTDMQKEAIDTA---IAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRS 93
           I +ADM   MQ  A   A   + + EK S  K +A  +KKEFDK +GP WHCIVG S
Sbjct: 119 ILAADMPGFMQAHAFRCARMTLDSLEKFS-SKHMAFNLKKEFDKGYGPAWHCIVGSS 174

[Close]

BLAST of Chy6G112460 vs. TAIR 10
Match: AT1G52240.2 (RHO guanyl-nucleotide exchange factor 11 )

HSP 1 Score: 43.1 bits (100), Expect = 1.6e-04
Identity = 24/60 (40.00%), Postives = 34/60 (56.67%), Query Frame = 0


Query: 33 LSKKIVIKSADMFTDMQKEAIDTAIAAFEKHSVE--KDIAEQIKKEFDKNHGPTWHCIVG 91
          L  K +++ +DM   MQ +A+  A  A +   V   K IA  IKKEFD+ +G  W C+VG
Sbjct: 2  LEGKAMVEDSDMPVKMQMQAMAFASQALDLFDVFDCKSIAGHIKKEFDERYGSGWQCVVG 61

[Close]

BLAST of Chy6G112460 vs. TAIR 10
Match: AT4G27360.1 (Dynein light chain type 1 family protein )

HSP 1 Score: 42.4 bits (98), Expect = 2.6e-04
Identity = 24/60 (40.00%), Postives = 34/60 (56.67%), Query Frame = 0


Query: 33 LSKKIVIKSADMFTDMQKEAIDTAIAAFEKHSVEK--DIAEQIKKEFDKNHGPTWHCIVG 91
          L  K V+   DM   M+++A+  A  A +   V +   IA  IKKEFD+++G  W CIVG
Sbjct: 2  LEGKAVMGDTDMKQTMKEDALSLASKALDCFDVTEPTQIARFIKKEFDRSYGSGWQCIVG 61

The following BLAST results are available for this feature:

BLAST of Chy6G112460 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q22799	1.9e-15	63.33	Dynein light chain 1, cytoplasmic OS=Caenorhabditis elegans OX=6239 GN=dlc-1 PE=...	[more]
Q3MHR3	3.2e-15	63.79	Dynein light chain 2, cytoplasmic OS=Bos taurus OX=9913 GN=DYNLL2 PE=3 SV=1	[more]
Q96FJ2	3.2e-15	63.79	Dynein light chain 2, cytoplasmic OS=Homo sapiens OX=9606 GN=DYNLL2 PE=1 SV=1	[more]
Q9D0M5	3.2e-15	63.79	Dynein light chain 2, cytoplasmic OS=Mus musculus OX=10090 GN=Dynll2 PE=1 SV=1	[more]
Q78P75	3.2e-15	63.79	Dynein light chain 2, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Dynll2 PE=1 S...	[more]

BLAST of Chy6G112460 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LAM1	1.1e-42	97.83	Dynein light chain OS=Cucumis sativus OX=3659 GN=Csa_3G159460 PE=3 SV=1	[more]
A0A5D3CY39	1.2e-39	86.73	Dynein light chain OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold209G0...	[more]
A0A1S4DSP2	4.4e-39	91.30	Dynein light chain OS=Cucumis melo OX=3656 GN=LOC103483858 PE=3 SV=1	[more]
A0A6J1G0U9	2.7e-28	75.00	Dynein light chain OS=Cucurbita moschata OX=3662 GN=LOC111449637 PE=3 SV=1	[more]
A0A6J1I9I2	7.7e-28	72.63	Dynein light chain OS=Cucurbita maxima OX=3661 GN=LOC111472324 PE=3 SV=1	[more]

BLAST of Chy6G112460 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004134221.1	2.74e-58	97.83	dynein light chain 1, cytoplasmic [Cucumis sativus] >KGN57126.1 hypothetical pro...	[more]
KAA0049508.1	7.20e-54	86.73	dynein light chain 1 [Cucumis melo var. makuwa] >TYK16188.1 dynein light chain 1...	[more]
XP_016898981.1	1.46e-53	91.30	PREDICTED: dynein light chain 1, cytoplasmic-like [Cucumis melo] >XP_016898982.1...	[more]
XP_038904701.1	5.05e-42	81.52	dynein light chain 1, cytoplasmic-like [Benincasa hispida]	[more]
KAG7028990.1	1.07e-39	75.00	Dynein light chain 1, cytoplasmic [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of Chy6G112460 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G15930.1	1.4e-21	69.33	Dynein light chain type 1 family protein	[more]
AT5G20110.1	1.8e-05	49.12	Dynein light chain type 1 family protein	[more]
AT1G52240.2	1.6e-04	40.00	RHO guanyl-nucleotide exchange factor 11	[more]
AT4G27360.1	2.6e-04	40.00	Dynein light chain type 1 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001372	Dynein light chain, type 1/2	SMART	SM01375	Dynein_light_2	coord: 32..93 e-value: 5.6E-21 score: 85.7
IPR001372	Dynein light chain, type 1/2	PFAM	PF01221	Dynein_light	coord: 36..92 e-value: 7.3E-21 score: 74.4
IPR001372	Dynein light chain, type 1/2	PANTHER	PTHR11886	DYNEIN LIGHT CHAIN	coord: 25..92
IPR037177	Dynein light chain superfamily	GENE3D	3.30.740.10	Protein Inhibitor Of Neuronal Nitric Oxide Synthase;	coord: 33..98 e-value: 1.7E-23 score: 84.7
IPR037177	Dynein light chain superfamily	SUPERFAMILY	54648	DLC	coord: 32..92
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..34
None	No IPR available	PANTHER	PTHR11886:SF95	DYNEIN LIGHT CHAIN	coord: 25..92

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy6G112460.1	Chy6G112460.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007017	microtubule-based process
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0030286	dynein complex
cellular_component	GO:0005874	microtubule
molecular_function	GO:0045505	dynein intermediate chain binding
molecular_function	GO:0051959	dynein light intermediate chain binding