Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGATGGTTATTGGTGCTTTGGGATCAGCTCCATTAATGGCGGAAGCTCAGATTGGGAATATTAGGGGTCTCCCTCGACTTATGAGAGTCGAAGGAACTGTTTATTGCACTGCCGATGGCAACATTGGCCTCACTGGTTCCACCCCTTTTTTCTCGAGTACGTCATTTTTTTTTTAATCATTTTCTTCTCTGATAACTCAACTTCTTTTATTTTTTTACTTTTACAAATTATTATAATGATTTTAAATCTGACTTAAAAAAACTAAAAATTTGTATTTAAAAAAATTGCAACAAATATTTATTATATATATATATTTTAAAAAAAGTCAAATATTTATTAAATATGATCCTTAATTTTTTATTTTCATGTTAATTATATTCCTGAAATAATTTTGTATGTTATAAATTAAATTATTTTTTTCAATATTGTAATGAAAGATTGCATCTTCTTAGATTTTAAGTTAAATATAGATCGATCCAAGAATGACTAATAAGAATATGTAACAACAATTTCTTTTTAAAATAATTATATTAATGGTTGTTTTAGGAAGCTTCTATTATATACAAAAAAAAAATAGAGATTAAAATATGTTTTTTTTTGGCAGACGCTAGAGTTGAAATATTGGGGTCATTATTTGAAAGCGTCATGCCACCTTCAATAACAAACAACTTAGGATCCTTTTTGATGTATTTTCCATCTGCCAGTTTATCCTCAATGTTAAACGATAGTACCATCATGGTGAATACTCCATTGTCCAATTGTAATCCGATGCTTCCATCTACTGGATTTCTATCGTCGACACTGGAATACAATGGAACAGCTGTGGAGGATGGCAACATCGTCGTGAATGTAGTTCCCAAACCATTCACATTCAATCCATCTCCTTAA
mRNA sequence
ATGGTGATGGTTATTGGTGCTTTGGGATCAGCTCCATTAATGGCGGAAGCTCAGATTGGGAATATTAGGGGTCTCCCTCGACTTATGAGAGTCGAAGGAACTGTTTATTGCACTGCCGATGGCAACATTGGCCTCACTGGTTCCACCCCTTTTTTCTCGAACGCTAGAGTTGAAATATTGGGGTCATTATTTGAAAGCGTCATGCCACCTTCAATAACAAACAACTTAGGATCCTTTTTGATGTATTTTCCATCTGCCAGTTTATCCTCAATGTTAAACGATAGTACCATCATGGTGAATACTCCATTGTCCAATTGTAATCCGATGCTTCCATCTACTGGATTTCTATCGTCGACACTGGAATACAATGGAACAGCTGTGGAGGATGGCAACATCGTCGTGAATGTAGTTCCCAAACCATTCACATTCAATCCATCTCCTTAA
Coding sequence (CDS)
ATGGTGATGGTTATTGGTGCTTTGGGATCAGCTCCATTAATGGCGGAAGCTCAGATTGGGAATATTAGGGGTCTCCCTCGACTTATGAGAGTCGAAGGAACTGTTTATTGCACTGCCGATGGCAACATTGGCCTCACTGGTTCCACCCCTTTTTTCTCGAACGCTAGAGTTGAAATATTGGGGTCATTATTTGAAAGCGTCATGCCACCTTCAATAACAAACAACTTAGGATCCTTTTTGATGTATTTTCCATCTGCCAGTTTATCCTCAATGTTAAACGATAGTACCATCATGGTGAATACTCCATTGTCCAATTGTAATCCGATGCTTCCATCTACTGGATTTCTATCGTCGACACTGGAATACAATGGAACAGCTGTGGAGGATGGCAACATCGTCGTGAATGTAGTTCCCAAACCATTCACATTCAATCCATCTCCTTAA
Protein sequence
MVMVIGALGSAPLMAEAQIGNIRGLPRLMRVEGTVYCTADGNIGLTGSTPFFSNARVEILGSLFESVMPPSITNNLGSFLMYFPSASLSSMLNDSTIMVNTPLSNCNPMLPSTGFLSSTLEYNGTAVEDGNIVVNVVPKPFTFNPSP*
Homology
BLAST of Chy6G112420 vs. ExPASy TrEMBL
Match:
A0A0A0L921 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G159420 PE=4 SV=1)
HSP 1 Score: 214.9 bits (546), Expect = 2.2e-52
Identity = 110/150 (73.33%), Postives = 125/150 (83.33%), Query Frame = 0
Query: 1 MVMVIGALGSAPLMAEAQIGNIRGLPRLMRVEGTVYCTADGNIG---LTGSTPFFSNARV 60
+VMVIG LGSAPLMAEAQIGN+RGLP LM+VEGTVYCTADGNIG L PFF++ARV
Sbjct: 10 LVMVIGGLGSAPLMAEAQIGNVRGLPPLMKVEGTVYCTADGNIGNIDLAYPIPFFTDARV 69
Query: 61 EILGSLFESVMPPSITNNLGSFLMYFPSASLSSMLNDSTIMVNTPLSNCNPMLPSTGFLS 120
EILG LF +PPS+T++ GSF MYF S SLSS+L DSTIMV+TPLSNCN LPSTGFLS
Sbjct: 70 EILGFLFGRALPPSVTDDSGSFSMYFRSTSLSSVLTDSTIMVSTPLSNCNSTLPSTGFLS 129
Query: 121 STLEYNGTAVEDGNIVVNVVPKPFTFNPSP 148
STLEYNGT VEDGN ++ +VPK F F+PSP
Sbjct: 130 STLEYNGTVVEDGNTIMTLVPKRFRFSPSP 159
BLAST of Chy6G112420 vs. ExPASy TrEMBL
Match:
A0A0A0L595 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G154410 PE=4 SV=1)
HSP 1 Score: 132.5 bits (332), Expect = 1.5e-27
Identity = 76/152 (50.00%), Postives = 106/152 (69.74%), Query Frame = 0
Query: 1 MVMVIGALGSAPLMAEAQIGNIRGLPRLMRVEGTVYCTADGNIGLTG-STPFFSNARVEI 60
+VMV GALGSAPLMAEAQ I L +L+ ++GTV+CTADGNIG STP F NA V++
Sbjct: 10 LVMVFGALGSAPLMAEAQFNIIGSLLKLINIQGTVFCTADGNIGTNATSTPVFPNALVQL 69
Query: 61 -LGSLFESVMPPSITNNLGSFLMYFPSAS--LSSMLNDSTIMVNTPLSNCNPMLPSTGFL 120
G+ +++ + TNN G F M+ LSS+L++ ++V TP+S+CN LPSTGFL
Sbjct: 70 QCGN--GNIVSTTTTNNGGIFSMFLNPVQFVLSSLLSNCNLVVKTPISDCNATLPSTGFL 129
Query: 121 SSTLEYNGTAVEDGNI-VVNVVPKPFTFNPSP 148
+S+L++ G+ V+DG + ++ V P PFTF PSP
Sbjct: 130 TSSLQFLGSFVQDGLMQIMKVAPNPFTFIPSP 159
BLAST of Chy6G112420 vs. ExPASy TrEMBL
Match:
A0A5D3CZ16 (Phylloplanin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold209G001120 PE=4 SV=1)
HSP 1 Score: 127.1 bits (318), Expect = 6.1e-26
Identity = 78/150 (52.00%), Postives = 102/150 (68.00%), Query Frame = 0
Query: 1 MVMVIGALGSAPLMAEAQIGNIRG-LPRLMRVEGTVYCTADGNIGLTG--STPFFSNARV 60
MVMVIGALGSAPLMAEAQ+GNI G L ++ V+G VYCTADGNIG STP F NA V
Sbjct: 10 MVMVIGALGSAPLMAEAQLGNIIGSLLGVINVQGVVYCTADGNIGTINATSTPVFPNAVV 69
Query: 61 EI-LGSLFESVMPPSITNNLGSFLMYFPSAS--LSSMLNDSTIMVNTPLSNCNPMLPSTG 120
++ G+ +++ + TNN+GSF M LS++L D ++V TPL NCN LPSTG
Sbjct: 70 QLQCGN--GNIVSTTTTNNMGSFSMLLNPLQFLLSTLLTDCNVVVRTPLINCNATLPSTG 129
Query: 121 FLSSTLEYNGTAVEDGNI-VVNVVPKPFTF 144
FL+S +++ G V+DG + ++ V P FTF
Sbjct: 130 FLTSRMQFVGRFVQDGIMEIMKVAPNLFTF 157
BLAST of Chy6G112420 vs. ExPASy TrEMBL
Match:
A0A1S3AXJ8 (phylloplanin-like OS=Cucumis melo OX=3656 GN=LOC103483853 PE=4 SV=1)
HSP 1 Score: 127.1 bits (318), Expect = 6.1e-26
Identity = 78/150 (52.00%), Postives = 102/150 (68.00%), Query Frame = 0
Query: 1 MVMVIGALGSAPLMAEAQIGNIRG-LPRLMRVEGTVYCTADGNIGLTG--STPFFSNARV 60
MVMVIGALGSAPLMAEAQ+GNI G L ++ V+G VYCTADGNIG STP F NA V
Sbjct: 10 MVMVIGALGSAPLMAEAQLGNIIGSLLGVINVQGVVYCTADGNIGTINATSTPVFPNAVV 69
Query: 61 EI-LGSLFESVMPPSITNNLGSFLMYFPSAS--LSSMLNDSTIMVNTPLSNCNPMLPSTG 120
++ G+ +++ + TNN+GSF M LS++L D ++V TPL NCN LPSTG
Sbjct: 70 QLQCGN--GNIVSTTTTNNMGSFSMLLNPLQFLLSTLLTDCNVVVRTPLINCNATLPSTG 129
Query: 121 FLSSTLEYNGTAVEDGNI-VVNVVPKPFTF 144
FL+S +++ G V+DG + ++ V P FTF
Sbjct: 130 FLTSRMQFVGRFVQDGIMEIMKVAPNLFTF 157
BLAST of Chy6G112420 vs. ExPASy TrEMBL
Match:
A0A6J1IE70 (phylloplanin-like OS=Cucurbita maxima OX=3661 GN=LOC111472350 PE=4 SV=1)
HSP 1 Score: 113.2 bits (282), Expect = 9.1e-22
Identity = 68/150 (45.33%), Postives = 98/150 (65.33%), Query Frame = 0
Query: 2 VMVIGALGSAPLM-AEAQIGNIRGLPRLMRVEGTVYCTADGNIGLTG-STPFFSNARVEI 61
V+V+ A APLM AEAQ+G+I L L R++GTV+CTADGNIG G +TP F NA V++
Sbjct: 9 VLVMAAAMGAPLMVAEAQLGSIGSLLSLTRIQGTVFCTADGNIGANGTATPIFPNAAVQL 68
Query: 62 -LGSLFESVMPPSITNNLGSFLMYFPSAS--LSSMLNDSTIMVNTPLSNCNPMLPSTGFL 121
G+ +V+ + TN+ G FL+ LSS+ ++ +++VNTPLS+CN LPS G L
Sbjct: 69 QCGN--GNVVSTATTNSAGMFLILLNPLQFLLSSLTSNCSVLVNTPLSSCNATLPSVGNL 128
Query: 122 SSTLEYNGTAVEDGNIVVNVVPKPFTFNPS 147
S L + GT ++ + N++P+ FTF PS
Sbjct: 129 VSGLNFAGTILQGLLSITNIIPRGFTFQPS 156
BLAST of Chy6G112420 vs. NCBI nr
Match:
XP_004134217.1 (phylloplanin [Cucumis sativus] >KGN57122.1 hypothetical protein Csa_010875 [Cucumis sativus])
HSP 1 Score: 217 bits (553), Expect = 9.53e-70
Identity = 110/150 (73.33%), Postives = 125/150 (83.33%), Query Frame = 0
Query: 1 MVMVIGALGSAPLMAEAQIGNIRGLPRLMRVEGTVYCTADGNIG---LTGSTPFFSNARV 60
+VMVIG LGSAPLMAEAQIGN+RGLP LM+VEGTVYCTADGNIG L PFF++ARV
Sbjct: 10 LVMVIGGLGSAPLMAEAQIGNVRGLPPLMKVEGTVYCTADGNIGNIDLAYPIPFFTDARV 69
Query: 61 EILGSLFESVMPPSITNNLGSFLMYFPSASLSSMLNDSTIMVNTPLSNCNPMLPSTGFLS 120
EILG LF +PPS+T++ GSF MYF S SLSS+L DSTIMV+TPLSNCN LPSTGFLS
Sbjct: 70 EILGFLFGRALPPSVTDDSGSFSMYFRSTSLSSVLTDSTIMVSTPLSNCNSTLPSTGFLS 129
Query: 121 STLEYNGTAVEDGNIVVNVVPKPFTFNPSP 147
STLEYNGT VEDGN ++ +VPK F F+PSP
Sbjct: 130 STLEYNGTVVEDGNTIMTLVPKRFRFSPSP 159
BLAST of Chy6G112420 vs. NCBI nr
Match:
XP_004134491.2 (phylloplanin [Cucumis sativus] >KGN57120.1 hypothetical protein Csa_011182 [Cucumis sativus])
HSP 1 Score: 135 bits (339), Expect = 3.18e-37
Identity = 76/152 (50.00%), Postives = 106/152 (69.74%), Query Frame = 0
Query: 1 MVMVIGALGSAPLMAEAQIGNIRGLPRLMRVEGTVYCTADGNIGLTG-STPFFSNARVEI 60
+VMV GALGSAPLMAEAQ I L +L+ ++GTV+CTADGNIG STP F NA V++
Sbjct: 10 LVMVFGALGSAPLMAEAQFNIIGSLLKLINIQGTVFCTADGNIGTNATSTPVFPNALVQL 69
Query: 61 -LGSLFESVMPPSITNNLGSFLMYFPSAS--LSSMLNDSTIMVNTPLSNCNPMLPSTGFL 120
G+ +++ + TNN G F M+ LSS+L++ ++V TP+S+CN LPSTGFL
Sbjct: 70 QCGN--GNIVSTTTTNNGGIFSMFLNPVQFVLSSLLSNCNLVVKTPISDCNATLPSTGFL 129
Query: 121 SSTLEYNGTAVEDGNI-VVNVVPKPFTFNPSP 147
+S+L++ G+ V+DG + ++ V P PFTF PSP
Sbjct: 130 TSSLQFLGSFVQDGLMQIMKVAPNPFTFIPSP 159
BLAST of Chy6G112420 vs. NCBI nr
Match:
XP_008438895.1 (PREDICTED: phylloplanin-like [Cucumis melo] >KAA0049504.1 phylloplanin-like [Cucumis melo var. makuwa] >TYK16184.1 phylloplanin-like [Cucumis melo var. makuwa])
HSP 1 Score: 130 bits (326), Expect = 3.23e-35
Identity = 78/150 (52.00%), Postives = 102/150 (68.00%), Query Frame = 0
Query: 1 MVMVIGALGSAPLMAEAQIGNIRG-LPRLMRVEGTVYCTADGNIGLTG--STPFFSNARV 60
MVMVIGALGSAPLMAEAQ+GNI G L ++ V+G VYCTADGNIG STP F NA V
Sbjct: 10 MVMVIGALGSAPLMAEAQLGNIIGSLLGVINVQGVVYCTADGNIGTINATSTPVFPNAVV 69
Query: 61 EI-LGSLFESVMPPSITNNLGSFLMYFPSAS--LSSMLNDSTIMVNTPLSNCNPMLPSTG 120
++ G+ +++ + TNN+GSF M LS++L D ++V TPL NCN LPSTG
Sbjct: 70 QLQCGN--GNIVSTTTTNNMGSFSMLLNPLQFLLSTLLTDCNVVVRTPLINCNATLPSTG 129
Query: 121 FLSSTLEYNGTAVEDGNI-VVNVVPKPFTF 143
FL+S +++ G V+DG + ++ V P FTF
Sbjct: 130 FLTSRMQFVGRFVQDGIMEIMKVAPNLFTF 157
BLAST of Chy6G112420 vs. NCBI nr
Match:
XP_022973793.1 (phylloplanin-like [Cucurbita maxima])
HSP 1 Score: 116 bits (290), Expect = 7.75e-30
Identity = 68/150 (45.33%), Postives = 98/150 (65.33%), Query Frame = 0
Query: 2 VMVIGALGSAPLM-AEAQIGNIRGLPRLMRVEGTVYCTADGNIGLTGS-TPFFSNARVEI 61
V+V+ A APLM AEAQ+G+I L L R++GTV+CTADGNIG G+ TP F NA V++
Sbjct: 9 VLVMAAAMGAPLMVAEAQLGSIGSLLSLTRIQGTVFCTADGNIGANGTATPIFPNAAVQL 68
Query: 62 -LGSLFESVMPPSITNNLGSFLMYFPSAS--LSSMLNDSTIMVNTPLSNCNPMLPSTGFL 121
G+ +V+ + TN+ G FL+ LSS+ ++ +++VNTPLS+CN LPS G L
Sbjct: 69 QCGN--GNVVSTATTNSAGMFLILLNPLQFLLSSLTSNCSVLVNTPLSSCNATLPSVGNL 128
Query: 122 SSTLEYNGTAVEDGNIVVNVVPKPFTFNPS 146
S L + GT ++ + N++P+ FTF PS
Sbjct: 129 VSGLNFAGTILQGLLSITNIIPRGFTFQPS 156
BLAST of Chy6G112420 vs. NCBI nr
Match:
XP_038903470.1 (phylloplanin-like [Benincasa hispida])
HSP 1 Score: 112 bits (281), Expect = 1.72e-28
Identity = 67/147 (45.58%), Postives = 97/147 (65.99%), Query Frame = 0
Query: 4 VIGALGSAPLMAEAQIGNIRGLPRLMRVEGTVYCTADGNIGLTGS-TPFFSNARVEI-LG 63
++GA+G APLM EAQ+G + L L+R++GTV+CTA+GNIG+ G+ TP F NA V++ G
Sbjct: 12 IVGAMG-APLMVEAQLGIVGSLLGLIRIQGTVFCTANGNIGINGTATPIFPNASVQLQCG 71
Query: 64 SLFESVMPPSITNNLGSF-LMYFPSASLSSMLNDS-TIMVNTPLSNCNPMLPSTGFLSST 123
+ +++ + TNN+G F ++ P L S++ S + +VNTPLSNCN LPSTG L S
Sbjct: 72 N--GNIVSTTTTNNMGVFSILLNPLQFLLSLITSSCSTVVNTPLSNCNVTLPSTGVLLSR 131
Query: 124 LEYNGTAVEDGNIVVNVVPKPFTFNPS 146
L + G +E ++NV P F F PS
Sbjct: 132 LGFVGQTMEGILNILNVAPNGFEFLPS 155
BLAST of Chy6G112420 vs. TAIR 10
Match:
AT3G16660.1 (Pollen Ole e 1 allergen and extensin family protein )
HSP 1 Score: 66.2 bits (160), Expect = 2.5e-11
Identity = 43/124 (34.68%), Postives = 67/124 (54.03%), Query Frame = 0
Query: 20 GNIRGLPRLMRVEGTVYCTADGNIGLTGSTPFFSNARVEILGSLFESVMPPSITNNLGSF 79
G + G+ L+ + G V+C+ +G T STP F+NA VE+ V+ + TN G F
Sbjct: 54 GLVGGILNLVNINGVVFCSLNGAPSGT-STPAFANAGVELQCGRQNRVVSTATTNAAGLF 113
Query: 80 LMYFPSAS--LSSMLNDSTIMVNTPLSNCNPMLPSTGFLSSTLEYNGTAVEDGNIVVNVV 139
+ S LS++L+D ++V TPLS CN LPS G L S L G ++ +++++
Sbjct: 114 SLPTDSIQMLLSTLLSDCRVVVTTPLSTCNANLPSVGNLVSRLAMIGNSLTGLLNIISII 173
Query: 140 PKPF 142
P F
Sbjct: 174 PAGF 176
BLAST of Chy6G112420 vs. TAIR 10
Match:
AT3G16670.1 (Pollen Ole e 1 allergen and extensin family protein )
HSP 1 Score: 56.6 bits (135), Expect = 1.9e-08
Identity = 47/131 (35.88%), Postives = 67/131 (51.15%), Query Frame = 0
Query: 14 MAEAQIGNIRGLPRLMRVEGTVYCTADGNIGLTGS-TPFFSNARVEILGSLFESVMPPSI 73
MA AQ G G + + G ++CT +G L G+ P F+NA V++ V+ +I
Sbjct: 23 MANAQSG--LGGINVPIINGVLFCTING-APLNGTPAPAFANAVVQLQCGNLNRVVAETI 82
Query: 74 TNNLGSFLMYFP--SASLSSMLNDSTIMVNTPLSNCNPMLPSTGFLSSTLEYNGTAVEDG 133
TN G F SL ++LND I+V TP S+C+ LPSTG L S L G+ V
Sbjct: 83 TNIAGLFTFSTNGIQISLPTLLNDCRIVVPTPRSSCDATLPSTGQLISQLNLVGSIVSGL 142
Query: 134 NIVVNVVPKPF 142
+V ++P F
Sbjct: 143 LNIVAILPTGF 150
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A0A0L921 | 2.2e-52 | 73.33 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G159420 PE=4 SV=1 | [more] |
A0A0A0L595 | 1.5e-27 | 50.00 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G154410 PE=4 SV=1 | [more] |
A0A5D3CZ16 | 6.1e-26 | 52.00 | Phylloplanin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold209G00... | [more] |
A0A1S3AXJ8 | 6.1e-26 | 52.00 | phylloplanin-like OS=Cucumis melo OX=3656 GN=LOC103483853 PE=4 SV=1 | [more] |
A0A6J1IE70 | 9.1e-22 | 45.33 | phylloplanin-like OS=Cucurbita maxima OX=3661 GN=LOC111472350 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
XP_004134217.1 | 9.53e-70 | 73.33 | phylloplanin [Cucumis sativus] >KGN57122.1 hypothetical protein Csa_010875 [Cucu... | [more] |
XP_004134491.2 | 3.18e-37 | 50.00 | phylloplanin [Cucumis sativus] >KGN57120.1 hypothetical protein Csa_011182 [Cucu... | [more] |
XP_008438895.1 | 3.23e-35 | 52.00 | PREDICTED: phylloplanin-like [Cucumis melo] >KAA0049504.1 phylloplanin-like [Cuc... | [more] |
XP_022973793.1 | 7.75e-30 | 45.33 | phylloplanin-like [Cucurbita maxima] | [more] |
XP_038903470.1 | 1.72e-28 | 45.58 | phylloplanin-like [Benincasa hispida] | [more] |
Match Name | E-value | Identity | Description | |
AT3G16660.1 | 2.5e-11 | 34.68 | Pollen Ole e 1 allergen and extensin family protein | [more] |
AT3G16670.1 | 1.9e-08 | 35.88 | Pollen Ole e 1 allergen and extensin family protein | [more] |