Chy6G112420 (gene) Cucumber (hystrix) v1

Overview
NameChy6G112420
Typegene
OrganismCucumis hystrix (Cucumber (hystrix) v1)
Descriptionphylloplanin-like
LocationchrH06: 4858247 .. 4859138 (-)
RNA-Seq ExpressionChy6G112420
SyntenyChy6G112420
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGATGGTTATTGGTGCTTTGGGATCAGCTCCATTAATGGCGGAAGCTCAGATTGGGAATATTAGGGGTCTCCCTCGACTTATGAGAGTCGAAGGAACTGTTTATTGCACTGCCGATGGCAACATTGGCCTCACTGGTTCCACCCCTTTTTTCTCGAGTACGTCATTTTTTTTTTAATCATTTTCTTCTCTGATAACTCAACTTCTTTTATTTTTTTACTTTTACAAATTATTATAATGATTTTAAATCTGACTTAAAAAAACTAAAAATTTGTATTTAAAAAAATTGCAACAAATATTTATTATATATATATATTTTAAAAAAAGTCAAATATTTATTAAATATGATCCTTAATTTTTTATTTTCATGTTAATTATATTCCTGAAATAATTTTGTATGTTATAAATTAAATTATTTTTTTCAATATTGTAATGAAAGATTGCATCTTCTTAGATTTTAAGTTAAATATAGATCGATCCAAGAATGACTAATAAGAATATGTAACAACAATTTCTTTTTAAAATAATTATATTAATGGTTGTTTTAGGAAGCTTCTATTATATACAAAAAAAAAATAGAGATTAAAATATGTTTTTTTTTGGCAGACGCTAGAGTTGAAATATTGGGGTCATTATTTGAAAGCGTCATGCCACCTTCAATAACAAACAACTTAGGATCCTTTTTGATGTATTTTCCATCTGCCAGTTTATCCTCAATGTTAAACGATAGTACCATCATGGTGAATACTCCATTGTCCAATTGTAATCCGATGCTTCCATCTACTGGATTTCTATCGTCGACACTGGAATACAATGGAACAGCTGTGGAGGATGGCAACATCGTCGTGAATGTAGTTCCCAAACCATTCACATTCAATCCATCTCCTTAA

mRNA sequence

ATGGTGATGGTTATTGGTGCTTTGGGATCAGCTCCATTAATGGCGGAAGCTCAGATTGGGAATATTAGGGGTCTCCCTCGACTTATGAGAGTCGAAGGAACTGTTTATTGCACTGCCGATGGCAACATTGGCCTCACTGGTTCCACCCCTTTTTTCTCGAACGCTAGAGTTGAAATATTGGGGTCATTATTTGAAAGCGTCATGCCACCTTCAATAACAAACAACTTAGGATCCTTTTTGATGTATTTTCCATCTGCCAGTTTATCCTCAATGTTAAACGATAGTACCATCATGGTGAATACTCCATTGTCCAATTGTAATCCGATGCTTCCATCTACTGGATTTCTATCGTCGACACTGGAATACAATGGAACAGCTGTGGAGGATGGCAACATCGTCGTGAATGTAGTTCCCAAACCATTCACATTCAATCCATCTCCTTAA

Coding sequence (CDS)

ATGGTGATGGTTATTGGTGCTTTGGGATCAGCTCCATTAATGGCGGAAGCTCAGATTGGGAATATTAGGGGTCTCCCTCGACTTATGAGAGTCGAAGGAACTGTTTATTGCACTGCCGATGGCAACATTGGCCTCACTGGTTCCACCCCTTTTTTCTCGAACGCTAGAGTTGAAATATTGGGGTCATTATTTGAAAGCGTCATGCCACCTTCAATAACAAACAACTTAGGATCCTTTTTGATGTATTTTCCATCTGCCAGTTTATCCTCAATGTTAAACGATAGTACCATCATGGTGAATACTCCATTGTCCAATTGTAATCCGATGCTTCCATCTACTGGATTTCTATCGTCGACACTGGAATACAATGGAACAGCTGTGGAGGATGGCAACATCGTCGTGAATGTAGTTCCCAAACCATTCACATTCAATCCATCTCCTTAA

Protein sequence

MVMVIGALGSAPLMAEAQIGNIRGLPRLMRVEGTVYCTADGNIGLTGSTPFFSNARVEILGSLFESVMPPSITNNLGSFLMYFPSASLSSMLNDSTIMVNTPLSNCNPMLPSTGFLSSTLEYNGTAVEDGNIVVNVVPKPFTFNPSP*
Homology
BLAST of Chy6G112420 vs. ExPASy TrEMBL
Match: A0A0A0L921 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G159420 PE=4 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 2.2e-52
Identity = 110/150 (73.33%), Postives = 125/150 (83.33%), Query Frame = 0

Query: 1   MVMVIGALGSAPLMAEAQIGNIRGLPRLMRVEGTVYCTADGNIG---LTGSTPFFSNARV 60
           +VMVIG LGSAPLMAEAQIGN+RGLP LM+VEGTVYCTADGNIG   L    PFF++ARV
Sbjct: 10  LVMVIGGLGSAPLMAEAQIGNVRGLPPLMKVEGTVYCTADGNIGNIDLAYPIPFFTDARV 69

Query: 61  EILGSLFESVMPPSITNNLGSFLMYFPSASLSSMLNDSTIMVNTPLSNCNPMLPSTGFLS 120
           EILG LF   +PPS+T++ GSF MYF S SLSS+L DSTIMV+TPLSNCN  LPSTGFLS
Sbjct: 70  EILGFLFGRALPPSVTDDSGSFSMYFRSTSLSSVLTDSTIMVSTPLSNCNSTLPSTGFLS 129

Query: 121 STLEYNGTAVEDGNIVVNVVPKPFTFNPSP 148
           STLEYNGT VEDGN ++ +VPK F F+PSP
Sbjct: 130 STLEYNGTVVEDGNTIMTLVPKRFRFSPSP 159

BLAST of Chy6G112420 vs. ExPASy TrEMBL
Match: A0A0A0L595 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G154410 PE=4 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 1.5e-27
Identity = 76/152 (50.00%), Postives = 106/152 (69.74%), Query Frame = 0

Query: 1   MVMVIGALGSAPLMAEAQIGNIRGLPRLMRVEGTVYCTADGNIGLTG-STPFFSNARVEI 60
           +VMV GALGSAPLMAEAQ   I  L +L+ ++GTV+CTADGNIG    STP F NA V++
Sbjct: 10  LVMVFGALGSAPLMAEAQFNIIGSLLKLINIQGTVFCTADGNIGTNATSTPVFPNALVQL 69

Query: 61  -LGSLFESVMPPSITNNLGSFLMYFPSAS--LSSMLNDSTIMVNTPLSNCNPMLPSTGFL 120
             G+   +++  + TNN G F M+       LSS+L++  ++V TP+S+CN  LPSTGFL
Sbjct: 70  QCGN--GNIVSTTTTNNGGIFSMFLNPVQFVLSSLLSNCNLVVKTPISDCNATLPSTGFL 129

Query: 121 SSTLEYNGTAVEDGNI-VVNVVPKPFTFNPSP 148
           +S+L++ G+ V+DG + ++ V P PFTF PSP
Sbjct: 130 TSSLQFLGSFVQDGLMQIMKVAPNPFTFIPSP 159

BLAST of Chy6G112420 vs. ExPASy TrEMBL
Match: A0A5D3CZ16 (Phylloplanin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold209G001120 PE=4 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 6.1e-26
Identity = 78/150 (52.00%), Postives = 102/150 (68.00%), Query Frame = 0

Query: 1   MVMVIGALGSAPLMAEAQIGNIRG-LPRLMRVEGTVYCTADGNIGLTG--STPFFSNARV 60
           MVMVIGALGSAPLMAEAQ+GNI G L  ++ V+G VYCTADGNIG     STP F NA V
Sbjct: 10  MVMVIGALGSAPLMAEAQLGNIIGSLLGVINVQGVVYCTADGNIGTINATSTPVFPNAVV 69

Query: 61  EI-LGSLFESVMPPSITNNLGSFLMYFPSAS--LSSMLNDSTIMVNTPLSNCNPMLPSTG 120
           ++  G+   +++  + TNN+GSF M        LS++L D  ++V TPL NCN  LPSTG
Sbjct: 70  QLQCGN--GNIVSTTTTNNMGSFSMLLNPLQFLLSTLLTDCNVVVRTPLINCNATLPSTG 129

Query: 121 FLSSTLEYNGTAVEDGNI-VVNVVPKPFTF 144
           FL+S +++ G  V+DG + ++ V P  FTF
Sbjct: 130 FLTSRMQFVGRFVQDGIMEIMKVAPNLFTF 157

BLAST of Chy6G112420 vs. ExPASy TrEMBL
Match: A0A1S3AXJ8 (phylloplanin-like OS=Cucumis melo OX=3656 GN=LOC103483853 PE=4 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 6.1e-26
Identity = 78/150 (52.00%), Postives = 102/150 (68.00%), Query Frame = 0

Query: 1   MVMVIGALGSAPLMAEAQIGNIRG-LPRLMRVEGTVYCTADGNIGLTG--STPFFSNARV 60
           MVMVIGALGSAPLMAEAQ+GNI G L  ++ V+G VYCTADGNIG     STP F NA V
Sbjct: 10  MVMVIGALGSAPLMAEAQLGNIIGSLLGVINVQGVVYCTADGNIGTINATSTPVFPNAVV 69

Query: 61  EI-LGSLFESVMPPSITNNLGSFLMYFPSAS--LSSMLNDSTIMVNTPLSNCNPMLPSTG 120
           ++  G+   +++  + TNN+GSF M        LS++L D  ++V TPL NCN  LPSTG
Sbjct: 70  QLQCGN--GNIVSTTTTNNMGSFSMLLNPLQFLLSTLLTDCNVVVRTPLINCNATLPSTG 129

Query: 121 FLSSTLEYNGTAVEDGNI-VVNVVPKPFTF 144
           FL+S +++ G  V+DG + ++ V P  FTF
Sbjct: 130 FLTSRMQFVGRFVQDGIMEIMKVAPNLFTF 157

BLAST of Chy6G112420 vs. ExPASy TrEMBL
Match: A0A6J1IE70 (phylloplanin-like OS=Cucurbita maxima OX=3661 GN=LOC111472350 PE=4 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 9.1e-22
Identity = 68/150 (45.33%), Postives = 98/150 (65.33%), Query Frame = 0

Query: 2   VMVIGALGSAPLM-AEAQIGNIRGLPRLMRVEGTVYCTADGNIGLTG-STPFFSNARVEI 61
           V+V+ A   APLM AEAQ+G+I  L  L R++GTV+CTADGNIG  G +TP F NA V++
Sbjct: 9   VLVMAAAMGAPLMVAEAQLGSIGSLLSLTRIQGTVFCTADGNIGANGTATPIFPNAAVQL 68

Query: 62  -LGSLFESVMPPSITNNLGSFLMYFPSAS--LSSMLNDSTIMVNTPLSNCNPMLPSTGFL 121
             G+   +V+  + TN+ G FL+        LSS+ ++ +++VNTPLS+CN  LPS G L
Sbjct: 69  QCGN--GNVVSTATTNSAGMFLILLNPLQFLLSSLTSNCSVLVNTPLSSCNATLPSVGNL 128

Query: 122 SSTLEYNGTAVEDGNIVVNVVPKPFTFNPS 147
            S L + GT ++    + N++P+ FTF PS
Sbjct: 129 VSGLNFAGTILQGLLSITNIIPRGFTFQPS 156

BLAST of Chy6G112420 vs. NCBI nr
Match: XP_004134217.1 (phylloplanin [Cucumis sativus] >KGN57122.1 hypothetical protein Csa_010875 [Cucumis sativus])

HSP 1 Score: 217 bits (553), Expect = 9.53e-70
Identity = 110/150 (73.33%), Postives = 125/150 (83.33%), Query Frame = 0

Query: 1   MVMVIGALGSAPLMAEAQIGNIRGLPRLMRVEGTVYCTADGNIG---LTGSTPFFSNARV 60
           +VMVIG LGSAPLMAEAQIGN+RGLP LM+VEGTVYCTADGNIG   L    PFF++ARV
Sbjct: 10  LVMVIGGLGSAPLMAEAQIGNVRGLPPLMKVEGTVYCTADGNIGNIDLAYPIPFFTDARV 69

Query: 61  EILGSLFESVMPPSITNNLGSFLMYFPSASLSSMLNDSTIMVNTPLSNCNPMLPSTGFLS 120
           EILG LF   +PPS+T++ GSF MYF S SLSS+L DSTIMV+TPLSNCN  LPSTGFLS
Sbjct: 70  EILGFLFGRALPPSVTDDSGSFSMYFRSTSLSSVLTDSTIMVSTPLSNCNSTLPSTGFLS 129

Query: 121 STLEYNGTAVEDGNIVVNVVPKPFTFNPSP 147
           STLEYNGT VEDGN ++ +VPK F F+PSP
Sbjct: 130 STLEYNGTVVEDGNTIMTLVPKRFRFSPSP 159

BLAST of Chy6G112420 vs. NCBI nr
Match: XP_004134491.2 (phylloplanin [Cucumis sativus] >KGN57120.1 hypothetical protein Csa_011182 [Cucumis sativus])

HSP 1 Score: 135 bits (339), Expect = 3.18e-37
Identity = 76/152 (50.00%), Postives = 106/152 (69.74%), Query Frame = 0

Query: 1   MVMVIGALGSAPLMAEAQIGNIRGLPRLMRVEGTVYCTADGNIGLTG-STPFFSNARVEI 60
           +VMV GALGSAPLMAEAQ   I  L +L+ ++GTV+CTADGNIG    STP F NA V++
Sbjct: 10  LVMVFGALGSAPLMAEAQFNIIGSLLKLINIQGTVFCTADGNIGTNATSTPVFPNALVQL 69

Query: 61  -LGSLFESVMPPSITNNLGSFLMYFPSAS--LSSMLNDSTIMVNTPLSNCNPMLPSTGFL 120
             G+   +++  + TNN G F M+       LSS+L++  ++V TP+S+CN  LPSTGFL
Sbjct: 70  QCGN--GNIVSTTTTNNGGIFSMFLNPVQFVLSSLLSNCNLVVKTPISDCNATLPSTGFL 129

Query: 121 SSTLEYNGTAVEDGNI-VVNVVPKPFTFNPSP 147
           +S+L++ G+ V+DG + ++ V P PFTF PSP
Sbjct: 130 TSSLQFLGSFVQDGLMQIMKVAPNPFTFIPSP 159

BLAST of Chy6G112420 vs. NCBI nr
Match: XP_008438895.1 (PREDICTED: phylloplanin-like [Cucumis melo] >KAA0049504.1 phylloplanin-like [Cucumis melo var. makuwa] >TYK16184.1 phylloplanin-like [Cucumis melo var. makuwa])

HSP 1 Score: 130 bits (326), Expect = 3.23e-35
Identity = 78/150 (52.00%), Postives = 102/150 (68.00%), Query Frame = 0

Query: 1   MVMVIGALGSAPLMAEAQIGNIRG-LPRLMRVEGTVYCTADGNIGLTG--STPFFSNARV 60
           MVMVIGALGSAPLMAEAQ+GNI G L  ++ V+G VYCTADGNIG     STP F NA V
Sbjct: 10  MVMVIGALGSAPLMAEAQLGNIIGSLLGVINVQGVVYCTADGNIGTINATSTPVFPNAVV 69

Query: 61  EI-LGSLFESVMPPSITNNLGSFLMYFPSAS--LSSMLNDSTIMVNTPLSNCNPMLPSTG 120
           ++  G+   +++  + TNN+GSF M        LS++L D  ++V TPL NCN  LPSTG
Sbjct: 70  QLQCGN--GNIVSTTTTNNMGSFSMLLNPLQFLLSTLLTDCNVVVRTPLINCNATLPSTG 129

Query: 121 FLSSTLEYNGTAVEDGNI-VVNVVPKPFTF 143
           FL+S +++ G  V+DG + ++ V P  FTF
Sbjct: 130 FLTSRMQFVGRFVQDGIMEIMKVAPNLFTF 157

BLAST of Chy6G112420 vs. NCBI nr
Match: XP_022973793.1 (phylloplanin-like [Cucurbita maxima])

HSP 1 Score: 116 bits (290), Expect = 7.75e-30
Identity = 68/150 (45.33%), Postives = 98/150 (65.33%), Query Frame = 0

Query: 2   VMVIGALGSAPLM-AEAQIGNIRGLPRLMRVEGTVYCTADGNIGLTGS-TPFFSNARVEI 61
           V+V+ A   APLM AEAQ+G+I  L  L R++GTV+CTADGNIG  G+ TP F NA V++
Sbjct: 9   VLVMAAAMGAPLMVAEAQLGSIGSLLSLTRIQGTVFCTADGNIGANGTATPIFPNAAVQL 68

Query: 62  -LGSLFESVMPPSITNNLGSFLMYFPSAS--LSSMLNDSTIMVNTPLSNCNPMLPSTGFL 121
             G+   +V+  + TN+ G FL+        LSS+ ++ +++VNTPLS+CN  LPS G L
Sbjct: 69  QCGN--GNVVSTATTNSAGMFLILLNPLQFLLSSLTSNCSVLVNTPLSSCNATLPSVGNL 128

Query: 122 SSTLEYNGTAVEDGNIVVNVVPKPFTFNPS 146
            S L + GT ++    + N++P+ FTF PS
Sbjct: 129 VSGLNFAGTILQGLLSITNIIPRGFTFQPS 156

BLAST of Chy6G112420 vs. NCBI nr
Match: XP_038903470.1 (phylloplanin-like [Benincasa hispida])

HSP 1 Score: 112 bits (281), Expect = 1.72e-28
Identity = 67/147 (45.58%), Postives = 97/147 (65.99%), Query Frame = 0

Query: 4   VIGALGSAPLMAEAQIGNIRGLPRLMRVEGTVYCTADGNIGLTGS-TPFFSNARVEI-LG 63
           ++GA+G APLM EAQ+G +  L  L+R++GTV+CTA+GNIG+ G+ TP F NA V++  G
Sbjct: 12  IVGAMG-APLMVEAQLGIVGSLLGLIRIQGTVFCTANGNIGINGTATPIFPNASVQLQCG 71

Query: 64  SLFESVMPPSITNNLGSF-LMYFPSASLSSMLNDS-TIMVNTPLSNCNPMLPSTGFLSST 123
           +   +++  + TNN+G F ++  P   L S++  S + +VNTPLSNCN  LPSTG L S 
Sbjct: 72  N--GNIVSTTTTNNMGVFSILLNPLQFLLSLITSSCSTVVNTPLSNCNVTLPSTGVLLSR 131

Query: 124 LEYNGTAVEDGNIVVNVVPKPFTFNPS 146
           L + G  +E    ++NV P  F F PS
Sbjct: 132 LGFVGQTMEGILNILNVAPNGFEFLPS 155

BLAST of Chy6G112420 vs. TAIR 10
Match: AT3G16660.1 (Pollen Ole e 1 allergen and extensin family protein )

HSP 1 Score: 66.2 bits (160), Expect = 2.5e-11
Identity = 43/124 (34.68%), Postives = 67/124 (54.03%), Query Frame = 0

Query: 20  GNIRGLPRLMRVEGTVYCTADGNIGLTGSTPFFSNARVEILGSLFESVMPPSITNNLGSF 79
           G + G+  L+ + G V+C+ +G    T STP F+NA VE+       V+  + TN  G F
Sbjct: 54  GLVGGILNLVNINGVVFCSLNGAPSGT-STPAFANAGVELQCGRQNRVVSTATTNAAGLF 113

Query: 80  LMYFPSAS--LSSMLNDSTIMVNTPLSNCNPMLPSTGFLSSTLEYNGTAVEDGNIVVNVV 139
            +   S    LS++L+D  ++V TPLS CN  LPS G L S L   G ++     +++++
Sbjct: 114 SLPTDSIQMLLSTLLSDCRVVVTTPLSTCNANLPSVGNLVSRLAMIGNSLTGLLNIISII 173

Query: 140 PKPF 142
           P  F
Sbjct: 174 PAGF 176

BLAST of Chy6G112420 vs. TAIR 10
Match: AT3G16670.1 (Pollen Ole e 1 allergen and extensin family protein )

HSP 1 Score: 56.6 bits (135), Expect = 1.9e-08
Identity = 47/131 (35.88%), Postives = 67/131 (51.15%), Query Frame = 0

Query: 14  MAEAQIGNIRGLPRLMRVEGTVYCTADGNIGLTGS-TPFFSNARVEILGSLFESVMPPSI 73
           MA AQ G   G   +  + G ++CT +G   L G+  P F+NA V++       V+  +I
Sbjct: 23  MANAQSG--LGGINVPIINGVLFCTING-APLNGTPAPAFANAVVQLQCGNLNRVVAETI 82

Query: 74  TNNLGSFLMYFP--SASLSSMLNDSTIMVNTPLSNCNPMLPSTGFLSSTLEYNGTAVEDG 133
           TN  G F         SL ++LND  I+V TP S+C+  LPSTG L S L   G+ V   
Sbjct: 83  TNIAGLFTFSTNGIQISLPTLLNDCRIVVPTPRSSCDATLPSTGQLISQLNLVGSIVSGL 142

Query: 134 NIVVNVVPKPF 142
             +V ++P  F
Sbjct: 143 LNIVAILPTGF 150

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0L9212.2e-5273.33Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G159420 PE=4 SV=1[more]
A0A0A0L5951.5e-2750.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G154410 PE=4 SV=1[more]
A0A5D3CZ166.1e-2652.00Phylloplanin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold209G00... [more]
A0A1S3AXJ86.1e-2652.00phylloplanin-like OS=Cucumis melo OX=3656 GN=LOC103483853 PE=4 SV=1[more]
A0A6J1IE709.1e-2245.33phylloplanin-like OS=Cucurbita maxima OX=3661 GN=LOC111472350 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
XP_004134217.19.53e-7073.33phylloplanin [Cucumis sativus] >KGN57122.1 hypothetical protein Csa_010875 [Cucu... [more]
XP_004134491.23.18e-3750.00phylloplanin [Cucumis sativus] >KGN57120.1 hypothetical protein Csa_011182 [Cucu... [more]
XP_008438895.13.23e-3552.00PREDICTED: phylloplanin-like [Cucumis melo] >KAA0049504.1 phylloplanin-like [Cuc... [more]
XP_022973793.17.75e-3045.33phylloplanin-like [Cucurbita maxima][more]
XP_038903470.11.72e-2845.58phylloplanin-like [Benincasa hispida][more]
Match NameE-valueIdentityDescription
AT3G16660.12.5e-1134.68Pollen Ole e 1 allergen and extensin family protein [more]
AT3G16670.11.9e-0835.88Pollen Ole e 1 allergen and extensin family protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR34458:SF5POLLEN OLE E 1 ALLERGEN AND EXTENSIN FAMILY PROTEINcoord: 3..144
IPR040404Phylloplanin-likePANTHERPTHR34458POLLEN OLE E 1 ALLERGEN AND EXTENSIN FAMILY PROTEIN-RELATEDcoord: 3..144

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Chy6G112420.1Chy6G112420.1mRNA