Chy6G111330 (gene) Cucumber (hystrix) v1

Overview


Name	Chy6G111330
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Unknown protein
Location	chrH06: 4130026 .. 4130364 (-)
RNA-Seq Expression	Chy6G111330
Synteny	Chy6G111330

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGGAAACGGCGAAGTTGAACGCTGCGAGGTCTGGCTTGGTGGTGATCGGAGCTTTGGCCTTCGGATACCTGAGCTTACAGCTTGTGTTCAAGCCCTACCTCGAGAAAGCTCAAAGTTCTCTTCAACATCCCGAGCCTGAGCCCTCTACAATTCCAAAAGACGCCATTTCAAACCCCGACGGTTAAGCTCAATCTTTGTTGTTTTGCCTTGGTATGTATAAATTTAGGTAATTGAGAATGACGCTTTCGAGATTACCTTAAAATTTTTCAGTTTCAAGAGATTTTGGGAAACAGGAGAAGAATGCATTGCTATTGATTGAAGAAGATTACAGATAG

mRNA sequence

ATGAAGGAAACGGCGAAGTTGAACGCTGCGAGGTCTGGCTTGGTGGTGATCGGAGCTTTGGCCTTCGGATACCTGAGCTTACAGCTTGTGTTCAAGCCCTACCTCGAGAAAGCTCAAAGTTCTCTTCAACATCCCGAGCCTGAGCCCTCTACAATTCCAAAAGACGCCATTTCAAACCCCGACGTTTCAAGAGATTTTGGGAAACAGGAGAAGAATGCATTGCTATTGATTGAAGAAGATTACAGATAG

Coding sequence (CDS)

ATGAAGGAAACGGCGAAGTTGAACGCTGCGAGGTCTGGCTTGGTGGTGATCGGAGCTTTGGCCTTCGGATACCTGAGCTTACAGCTTGTGTTCAAGCCCTACCTCGAGAAAGCTCAAAGTTCTCTTCAACATCCCGAGCCTGAGCCCTCTACAATTCCAAAAGACGCCATTTCAAACCCCGACGTTTCAAGAGATTTTGGGAAACAGGAGAAGAATGCATTGCTATTGATTGAAGAAGATTACAGATAG

Protein sequence

MKETAKLNAARSGLVVIGALAFGYLSLQLVFKPYLEKAQSSLQHPEPEPSTIPKDAISNPDVSRDFGKQEKNALLLIEEDYR*

Homology

[Close]

BLAST of Chy6G111330 vs. ExPASy TrEMBL
Match: A0A0A0L5N1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G149930 PE=4 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 3.4e-34
Identity = 79/81 (97.53%), Postives = 80/81 (98.77%), Query Frame = 0


Query: 1  MKETAKLNAARSGLVVIGALAFGYLSLQLVFKPYLEKAQSSLQHPEPEPSTIPKDAISNP 60
          MKETAKLNAARSGLVVIGALAFGYLSLQLVFKPYLEKAQSSLQHPEPEPSTIPKDAISN 
Sbjct: 1  MKETAKLNAARSGLVVIGALAFGYLSLQLVFKPYLEKAQSSLQHPEPEPSTIPKDAISNL 60

Query: 61 DVSRDFGKQEKNALLLIEEDY 82
          DVSRDFGKQEK+ALLLIEEDY
Sbjct: 61 DVSRDFGKQEKDALLLIEEDY 81

[Close]

BLAST of Chy6G111330 vs. ExPASy TrEMBL
Match: A0A5A7U4W2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G00160 PE=4 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 8.1e-28
Identity = 69/82 (84.15%), Postives = 74/82 (90.24%), Query Frame = 0


Query: 1  MKETAKLNAARSGLVVIGALAFGYLSLQLVFKPYLEKAQSSLQHPEPEPSTIPKDAISNP 60
          MKETAKLNAARSGLVVIGALAFGYLSLQ+ FKPYLEKAQS LQHPEPEPSTI KDA+SNP
Sbjct: 1  MKETAKLNAARSGLVVIGALAFGYLSLQVGFKPYLEKAQSYLQHPEPEPSTILKDAVSNP 60

Query: 61 DVSRDFGKQEKNALLLIEEDYR 83
          DVSRD GK +K+ LLLIE+  R
Sbjct: 61 DVSRDVGKLKKDRLLLIEDTDR 82

[Close]

BLAST of Chy6G111330 vs. ExPASy TrEMBL
Match: A0A4D9A3A6 (Uncharacterized protein OS=Salvia splendens OX=180675 GN=Saspl_033849 PE=4 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 1.1e-08
Identity = 37/59 (62.71%), Postives = 42/59 (71.19%), Query Frame = 0


Query: 1  MKETAKLNAARSGLVVIGALAFGYLSLQLVFKPYLEKAQSSLQHPEPEPSTIPKDAISN 60
          M+ TAK NA RSGLVVIGALAFGYL+L L FKPYLEKAQ   QH     S+ P D  ++
Sbjct: 1  MRGTAKANAMRSGLVVIGALAFGYLTLHLGFKPYLEKAQLEQQHQSAAASSQPVDTFAD 59

[Close]

BLAST of Chy6G111330 vs. ExPASy TrEMBL
Match: A0A2I0L8Y5 (Uncharacterized protein OS=Punica granatum OX=22663 GN=CRG98_002446 PE=4 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 7.2e-08
Identity = 32/60 (53.33%), Postives = 45/60 (75.00%), Query Frame = 0


Query: 1  MKETAKLNAARSGLVVIGALAFGYLSLQLVFKPYLEKAQSSLQHPEPEPSTIPKDAISNP 60
          M +TAK+NA RSG+VV+GALAFGYLS +L FKPYLE+A+++L+   P   ++ +   S P
Sbjct: 1  MNQTAKMNAIRSGIVVVGALAFGYLSFRLGFKPYLERAEAALESAGPSQPSLSQSEHSPP 60

[Close]

BLAST of Chy6G111330 vs. ExPASy TrEMBL
Match: W9R337 (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_007349 PE=4 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 7.2e-08
Identity = 30/51 (58.82%), Postives = 43/51 (84.31%), Query Frame = 0


Query: 1  MKETAKLNAARSGLVVIGALAFGYLSLQLVFKPYLEKAQSSLQHPEPEPST 52
          M++  K+NA RSG+VV+GA+AFGYL+L L FKP+LEKAQ S++H + +PS+
Sbjct: 1  MRDRRKMNAMRSGVVVVGAMAFGYLTLYLGFKPFLEKAQLSVEHSQSQPSS 51

[Close]

BLAST of Chy6G111330 vs. NCBI nr
Match: KGN57013.1 (hypothetical protein Csa_010432 [Cucumis sativus])

HSP 1 Score: 154 bits (388), Expect = 8.35e-47
Identity = 79/81 (97.53%), Postives = 80/81 (98.77%), Query Frame = 0


Query: 1  MKETAKLNAARSGLVVIGALAFGYLSLQLVFKPYLEKAQSSLQHPEPEPSTIPKDAISNP 60
          MKETAKLNAARSGLVVIGALAFGYLSLQLVFKPYLEKAQSSLQHPEPEPSTIPKDAISN 
Sbjct: 1  MKETAKLNAARSGLVVIGALAFGYLSLQLVFKPYLEKAQSSLQHPEPEPSTIPKDAISNL 60

Query: 61 DVSRDFGKQEKNALLLIEEDY 81
          DVSRDFGKQEK+ALLLIEEDY
Sbjct: 61 DVSRDFGKQEKDALLLIEEDY 81

[Close]

BLAST of Chy6G111330 vs. NCBI nr
Match: KAA0049387.1 (hypothetical protein E6C27_scaffold171G006320 [Cucumis melo var. makuwa] >TYK17172.1 hypothetical protein E5676_scaffold434G00160 [Cucumis melo var. makuwa])

HSP 1 Score: 132 bits (333), Expect = 5.85e-38
Identity = 69/82 (84.15%), Postives = 74/82 (90.24%), Query Frame = 0


Query: 1  MKETAKLNAARSGLVVIGALAFGYLSLQLVFKPYLEKAQSSLQHPEPEPSTIPKDAISNP 60
          MKETAKLNAARSGLVVIGALAFGYLSLQ+ FKPYLEKAQS LQHPEPEPSTI KDA+SNP
Sbjct: 1  MKETAKLNAARSGLVVIGALAFGYLSLQVGFKPYLEKAQSYLQHPEPEPSTILKDAVSNP 60

Query: 61 DVSRDFGKQEKNALLLIEEDYR 82
          DVSRD GK +K+ LLLIE+  R
Sbjct: 61 DVSRDVGKLKKDRLLLIEDTDR 82

[Close]

BLAST of Chy6G111330 vs. NCBI nr
Match: KAG7018683.1 (hypothetical protein SDJN02_20554, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 105 bits (263), Expect = 1.41e-27
Identity = 54/61 (88.52%), Postives = 56/61 (91.80%), Query Frame = 0


Query: 1  MKETAKLNAARSGLVVIGALAFGYLSLQLVFKPYLEKAQSSLQHPEPEPSTIPKDAISNP 60
          MKE AKLNA RSG+VVIGALAFGYLSL LVFKPYLEKAQSSLQHP+ EPSTIPKDAISN 
Sbjct: 34 MKEAAKLNAVRSGVVVIGALAFGYLSLHLVFKPYLEKAQSSLQHPDSEPSTIPKDAISNR 93

[Close]

BLAST of Chy6G111330 vs. NCBI nr
Match: KAG6582279.1 (hypothetical protein SDJN03_22281, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 103 bits (257), Expect = 6.05e-27
Identity = 53/61 (86.89%), Postives = 54/61 (88.52%), Query Frame = 0


Query: 1  MKETAKLNAARSGLVVIGALAFGYLSLQLVFKPYLEKAQSSLQHPEPEPSTIPKDAISNP 60
          MKE AKLNA RSG+VVIGALAFGYLSL LVFKPYLEKAQ SLQHP  EPSTIPKDAISN 
Sbjct: 11 MKEAAKLNAVRSGVVVIGALAFGYLSLHLVFKPYLEKAQGSLQHPNSEPSTIPKDAISNR 70

[Close]

BLAST of Chy6G111330 vs. NCBI nr
Match: KAF3457191.1 (hypothetical protein FNV43_RR01848 [Rhamnella rubrinervis])

HSP 1 Score: 72.0 bits (175), Expect = 1.42e-14
Identity = 34/50 (68.00%), Postives = 42/50 (84.00%), Query Frame = 0


Query: 1  MKETAKLNAARSGLVVIGALAFGYLSLQLVFKPYLEKAQSSLQHPEPEPS 50
          M++  K+NA RSG+VV+GALAFGYL+LQL FKP+LEKAQ S+ H EP PS
Sbjct: 1  MRDRTKVNAMRSGVVVVGALAFGYLTLQLGFKPFLEKAQVSIDHSEPTPS 50

[Close]

BLAST of Chy6G111330 vs. TAIR 10
Match: AT5G19151.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 53.9 bits (128), Expect = 7.1e-08
Identity = 30/55 (54.55%), Postives = 38/55 (69.09%), Query Frame = 0


Query: 1  MKETAKLNAARSGLVVIGALAFGYLSLQLVFKPYLEKA-------QSSLQHPEPE 49
          MK T   NA RS +VV+G+LAFGYLSL+L +KP+LEKA       QSS QH + +
Sbjct: 1  MKRTVMDNAIRSSVVVLGSLAFGYLSLELGYKPFLEKAEQYERSLQSSQQHQQQD 55

[Close]

BLAST of Chy6G111330 vs. TAIR 10
Match: AT3G52420.1 (outer envelope membrane protein 7 )

HSP 1 Score: 40.4 bits (93), Expect = 8.1e-04
Identity = 18/60 (30.00%), Postives = 35/60 (58.33%), Query Frame = 0


Query: 6  KLNAARSGLVVIGALAFGYLSLQLVFKPYLEKAQSSLQHPEPEPSTIPKDAISNPDVSRD 65
          K + A+   VV+ A+A G+L++++ FKP+L+K +SS+   +P       D  +    S++
Sbjct: 3  KTSGAKQATVVVAAMALGWLAIEIAFKPFLDKFRSSIDKSDPTKDPDDFDTAATATTSKE 62

The following BLAST results are available for this feature:

BLAST of Chy6G111330 vs.


Match Name	E-value	Identity	Description

BLAST of Chy6G111330 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L5N1	3.4e-34	97.53	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G149930 PE=4 SV=1	[more]
A0A5A7U4W2	8.1e-28	84.15	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A4D9A3A6	1.1e-08	62.71	Uncharacterized protein OS=Salvia splendens OX=180675 GN=Saspl_033849 PE=4 SV=1	[more]
A0A2I0L8Y5	7.2e-08	53.33	Uncharacterized protein OS=Punica granatum OX=22663 GN=CRG98_002446 PE=4 SV=1	[more]
W9R337	7.2e-08	58.82	Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_007349 PE=4 SV=1	[more]

BLAST of Chy6G111330 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN57013.1	8.35e-47	97.53	hypothetical protein Csa_010432 [Cucumis sativus]	[more]
KAA0049387.1	5.85e-38	84.15	hypothetical protein E6C27_scaffold171G006320 [Cucumis melo var. makuwa] >TYK171...	[more]
KAG7018683.1	1.41e-27	88.52	hypothetical protein SDJN02_20554, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6582279.1	6.05e-27	86.89	hypothetical protein SDJN03_22281, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAF3457191.1	1.42e-14	68.00	hypothetical protein FNV43_RR01848 [Rhamnella rubrinervis]	[more]

BLAST of Chy6G111330 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G19151.1	7.1e-08	54.55	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G52420.1	8.1e-04	30.00	outer envelope membrane protein 7	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 40..64
None	No IPR available	PANTHER	PTHR33982:SF4	OS05G0532800 PROTEIN	coord: 1..56
IPR038944	Outer envelope membrane protein 7-like	PANTHER	PTHR33982	OUTER ENVELOPE MEMBRANE PROTEIN 7-RELATED	coord: 1..56

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy6G111330.1	Chy6G111330.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane