Chy6G111110 (gene) Cucumber (hystrix) v1

Overview


Name	Chy6G111110
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Ferredoxin
Location	chrH06: 3944539 .. 3944973 (+)
RNA-Seq Expression	Chy6G111110
Synteny	Chy6G111110

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAACTCTTCATTTTGTTCCTTCCGCTTTCTCCCTACCAAAACAAAAGCAACCCATCAAGCTTTCCTCAGTCAGACCCACTACTCAGATAAGCTGCTCACGGCGGCGCTTGGTGGTCCGGTCGTACAAAGTAGTGATTGAGCACGAGGGGCAGACCACCGAGCTTGAGGTCGATCCCGATGAGAGCATATTGAGCAGTGCCTTGGACAATGGCTTAGAAATTCCTCACGATTGCAAGCTTGGAGTTTGCATGACTTGCCCTGCTCGCCTTGTCAGTGGCACCGTCGACCAAAGCGAAGGTATGTTGAGCGATGACGTTGTGGCACAAGGCTATTCGCTTCTGTGTGTGGCTTATCCTCGCTCAGATTGCCACATTAAAACCATCCCTGAGGAGGAATTGTTGGCACTTCAATTAGCCACGGCTAATGACTAA

mRNA sequence

ATGGCAACTCTTCATTTTGTTCCTTCCGCTTTCTCCCTACCAAAACAAAAGCAACCCATCAAGCTTTCCTCAGTCAGACCCACTACTCAGATAAGCTGCTCACGGCGGCGCTTGGTGGTCCGGTCGTACAAAGTAGTGATTGAGCACGAGGGGCAGACCACCGAGCTTGAGGTCGATCCCGATGAGAGCATATTGAGCAGTGCCTTGGACAATGGCTTAGAAATTCCTCACGATTGCAAGCTTGGAGTTTGCATGACTTGCCCTGCTCGCCTTGTCAGTGGCACCGTCGACCAAAGCGAAGGTATGTTGAGCGATGACGTTGTGGCACAAGGCTATTCGCTTCTGTGTGTGGCTTATCCTCGCTCAGATTGCCACATTAAAACCATCCCTGAGGAGGAATTGTTGGCACTTCAATTAGCCACGGCTAATGACTAA

Coding sequence (CDS)

ATGGCAACTCTTCATTTTGTTCCTTCCGCTTTCTCCCTACCAAAACAAAAGCAACCCATCAAGCTTTCCTCAGTCAGACCCACTACTCAGATAAGCTGCTCACGGCGGCGCTTGGTGGTCCGGTCGTACAAAGTAGTGATTGAGCACGAGGGGCAGACCACCGAGCTTGAGGTCGATCCCGATGAGAGCATATTGAGCAGTGCCTTGGACAATGGCTTAGAAATTCCTCACGATTGCAAGCTTGGAGTTTGCATGACTTGCCCTGCTCGCCTTGTCAGTGGCACCGTCGACCAAAGCGAAGGTATGTTGAGCGATGACGTTGTGGCACAAGGCTATTCGCTTCTGTGTGTGGCTTATCCTCGCTCAGATTGCCACATTAAAACCATCCCTGAGGAGGAATTGTTGGCACTTCAATTAGCCACGGCTAATGACTAA

Protein sequence

MATLHFVPSAFSLPKQKQPIKLSSVRPTTQISCSRRRLVVRSYKVVIEHEGQTTELEVDPDESILSSALDNGLEIPHDCKLGVCMTCPARLVSGTVDQSEGMLSDDVVAQGYSLLCVAYPRSDCHIKTIPEEELLALQLATAND*

Homology

[Close]

BLAST of Chy6G111110 vs. ExPASy Swiss-Prot
Match: O23344 (Ferredoxin C 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FDC1 PE=1 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 1.5e-45
Identity = 86/139 (61.87%), Postives = 114/139 (82.01%), Query Frame = 0


Query: 6   FVPSAFSLPKQKQPIKLSSVRPTTQISCSRRRLVVRSYKVVIEHEGQTTELEVDPDESIL 65
           ++ ++FS P +   +  ++ R   +   +  R++ R+YKVV+EH+G+TTELEV+PDE+IL
Sbjct: 19  YLSNSFSFPLRNATLSTTTNR---RNFLTTGRIIARAYKVVVEHDGKTTELEVEPDETIL 78

Query: 66  SSALDNGLEIPHDCKLGVCMTCPARLVSGTVDQSEGMLSDDVVAQGYSLLCVAYPRSDCH 125
           S ALD+GL++P+DC LGVCMTCPA+LV+GTVDQS GMLSDDVV +GY+LLC +YP SDCH
Sbjct: 79  SKALDSGLDVPYDCNLGVCMTCPAKLVTGTVDQSGGMLSDDVVERGYTLLCASYPTSDCH 138

Query: 126 IKTIPEEELLALQLATAND 145
           IK IPEEELL+LQLATAND
Sbjct: 139 IKMIPEEELLSLQLATAND 154

[Close]

BLAST of Chy6G111110 vs. ExPASy Swiss-Prot
Match: P08451 (Ferredoxin-2 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) OX=269084 GN=petF2 PE=3 SV=2)

HSP 1 Score: 98.2 bits (243), Expect = 8.1e-20
Identity = 47/98 (47.96%), Postives = 66/98 (67.35%), Query Frame = 0


Query: 42  SYKVVIEHEGQTTELEVDPDESILSSALDNGLEIPHDCKLGVCMTCPARLVSGTVDQSEG 101
           +Y+V + ++GQ+     D D+S+L SA   G+++P  C  GVC TC AR++SG VDQ + 
Sbjct: 3   TYQVEVIYQGQSQTFTADSDQSVLDSAQAAGVDLPASCLTGVCTTCAARILSGEVDQPDA 62

Query: 102 M-LSDDVVAQGYSLLCVAYPRSDCHIKTIPEEELLALQ 139
           M +  +   QGY+LLCVAYPRSD  I+T  E+EL ALQ
Sbjct: 63  MGVGPEPAKQGYTLLCVAYPRSDLKIETHKEDELYALQ 100

[Close]

BLAST of Chy6G111110 vs. ExPASy Swiss-Prot
Match: P00252 (Ferredoxin-1 OS=Desmonostoc muscorum OX=1179 PE=1 SV=2)

HSP 1 Score: 96.7 bits (239), Expect = 2.3e-19
Identity = 47/94 (50.00%), Postives = 63/94 (67.02%), Query Frame = 0


Query: 43  YKV-VIEHEGQTTELEVDPDESILSSALDNGLEIPHDCKLGVCMTCPARLVSGTVDQS-E 102
           YKV +++ EG  T ++V  DE IL  A D GL++P+ C+ G C TC  ++VSGTVDQS +
Sbjct: 5   YKVTLVDQEGTETTIDVPDDEYILDIAEDQGLDLPYSCRAGACSTCAGKIVSGTVDQSDQ 64

Query: 103 GMLSDDVVAQGYSLLCVAYPRSDCHIKTIPEEEL 135
             L DD + +GY L CVAYP SD  I+T  EE+L
Sbjct: 65  SFLDDDQIEKGYVLTCVAYPTSDLKIETHKEEDL 98

[Close]

BLAST of Chy6G111110 vs. ExPASy Swiss-Prot
Match: P00248 (Ferredoxin OS=Mastigocladus laminosus OX=83541 GN=petF PE=1 SV=2)

HSP 1 Score: 95.9 bits (237), Expect = 4.0e-19
Identity = 47/96 (48.96%), Postives = 63/96 (65.62%), Query Frame = 0


Query: 42  SYKVVI--EHEGQTTELEVDPDESILSSALDNGLEIPHDCKLGVCMTCPARLVSGTVDQS 101
           +YKV +  E EG    +EV  D+ IL +A + G+++P+ C+ G C TC  +L+SGTVDQS
Sbjct: 3   TYKVTLINEAEGLNKTIEVPDDQYILDAAEEAGIDLPYSCRAGACSTCAGKLISGTVDQS 62

Query: 102 -EGMLSDDVVAQGYSLLCVAYPRSDCHIKTIPEEEL 135
            +  L DD +  GY L CVAYP SDC I+T  EEEL
Sbjct: 63  DQSFLDDDQIEAGYVLTCVAYPTSDCVIETHKEEEL 98

[Close]

BLAST of Chy6G111110 vs. ExPASy Swiss-Prot
Match: Q51577 (Ferredoxin-1 OS=Leptolyngbya boryana OX=1184 GN=petF1 PE=1 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 8.9e-19
Identity = 46/96 (47.92%), Postives = 62/96 (64.58%), Query Frame = 0


Query: 42  SYKVVI--EHEGQTTELEVDPDESILSSALDNGLEIPHDCKLGVCMTCPARLVSGTVDQS 101
           S+KV +  E EG  T +EV  DE IL +A + G+++P+ C+ G C TC  ++ +GTVDQS
Sbjct: 3   SFKVTLINETEGLNTTIEVPDDEYILDAAEEQGIDLPYSCRAGACSTCAGKITAGTVDQS 62

Query: 102 -EGMLSDDVVAQGYSLLCVAYPRSDCHIKTIPEEEL 135
            +  L DD +  GY L CVAYP SDC I T  EE+L
Sbjct: 63  DQSFLDDDQIQAGYVLTCVAYPTSDCTILTHQEEDL 98

[Close]

BLAST of Chy6G111110 vs. ExPASy TrEMBL
Match: A0A0A0L4U6 (Ferredoxin OS=Cucumis sativus OX=3659 GN=Csa_3G146700 PE=3 SV=1)

HSP 1 Score: 289.7 bits (740), Expect = 7.0e-75
Identity = 144/144 (100.00%), Postives = 144/144 (100.00%), Query Frame = 0


Query: 1   MATLHFVPSAFSLPKQKQPIKLSSVRPTTQISCSRRRLVVRSYKVVIEHEGQTTELEVDP 60
           MATLHFVPSAFSLPKQKQPIKLSSVRPTTQISCSRRRLVVRSYKVVIEHEGQTTELEVDP
Sbjct: 1   MATLHFVPSAFSLPKQKQPIKLSSVRPTTQISCSRRRLVVRSYKVVIEHEGQTTELEVDP 60

Query: 61  DESILSSALDNGLEIPHDCKLGVCMTCPARLVSGTVDQSEGMLSDDVVAQGYSLLCVAYP 120
           DESILSSALDNGLEIPHDCKLGVCMTCPARLVSGTVDQSEGMLSDDVVAQGYSLLCVAYP
Sbjct: 61  DESILSSALDNGLEIPHDCKLGVCMTCPARLVSGTVDQSEGMLSDDVVAQGYSLLCVAYP 120

Query: 121 RSDCHIKTIPEEELLALQLATAND 145
           RSDCHIKTIPEEELLALQLATAND
Sbjct: 121 RSDCHIKTIPEEELLALQLATAND 144

[Close]

BLAST of Chy6G111110 vs. ExPASy TrEMBL
Match: A0A5D3D1U0 (Ferredoxin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G00400 PE=3 SV=1)

HSP 1 Score: 284.6 bits (727), Expect = 2.2e-73
Identity = 141/144 (97.92%), Postives = 142/144 (98.61%), Query Frame = 0


Query: 1   MATLHFVPSAFSLPKQKQPIKLSSVRPTTQISCSRRRLVVRSYKVVIEHEGQTTELEVDP 60
           MATLHFVPSAFSLPKQKQPIKLSSV+PTT ISCSRRRLVVRSYKVVIEHEGQTTELEVDP
Sbjct: 1   MATLHFVPSAFSLPKQKQPIKLSSVKPTTHISCSRRRLVVRSYKVVIEHEGQTTELEVDP 60

Query: 61  DESILSSALDNGLEIPHDCKLGVCMTCPARLVSGTVDQSEGMLSDDVVAQGYSLLCVAYP 120
           DESILSSALDNGLEIPHDCKLGVCMTCPARLVSGTVDQSEGMLSDDVV QGYSLLCVAYP
Sbjct: 61  DESILSSALDNGLEIPHDCKLGVCMTCPARLVSGTVDQSEGMLSDDVVEQGYSLLCVAYP 120

Query: 121 RSDCHIKTIPEEELLALQLATAND 145
           RSDCHIKTIPEEELLALQLATAND
Sbjct: 121 RSDCHIKTIPEEELLALQLATAND 144

[Close]

BLAST of Chy6G111110 vs. ExPASy TrEMBL
Match: A0A1S3AX36 (Ferredoxin OS=Cucumis melo OX=3656 GN=LOC103483712 PE=3 SV=1)

HSP 1 Score: 284.6 bits (727), Expect = 2.2e-73
Identity = 141/144 (97.92%), Postives = 142/144 (98.61%), Query Frame = 0


Query: 1   MATLHFVPSAFSLPKQKQPIKLSSVRPTTQISCSRRRLVVRSYKVVIEHEGQTTELEVDP 60
           MATLHFVPSAFSLPKQKQPIKLSSV+PTT ISCSRRRLVVRSYKVVIEHEGQTTELEVDP
Sbjct: 36  MATLHFVPSAFSLPKQKQPIKLSSVKPTTHISCSRRRLVVRSYKVVIEHEGQTTELEVDP 95

Query: 61  DESILSSALDNGLEIPHDCKLGVCMTCPARLVSGTVDQSEGMLSDDVVAQGYSLLCVAYP 120
           DESILSSALDNGLEIPHDCKLGVCMTCPARLVSGTVDQSEGMLSDDVV QGYSLLCVAYP
Sbjct: 96  DESILSSALDNGLEIPHDCKLGVCMTCPARLVSGTVDQSEGMLSDDVVEQGYSLLCVAYP 155

Query: 121 RSDCHIKTIPEEELLALQLATAND 145
           RSDCHIKTIPEEELLALQLATAND
Sbjct: 156 RSDCHIKTIPEEELLALQLATAND 179

[Close]

BLAST of Chy6G111110 vs. ExPASy TrEMBL
Match: A0A6J1GY17 (Ferredoxin OS=Cucurbita moschata OX=3662 GN=LOC111457884 PE=3 SV=1)

HSP 1 Score: 263.5 bits (672), Expect = 5.3e-67
Identity = 132/147 (89.80%), Postives = 137/147 (93.20%), Query Frame = 0


Query: 1   MATLHFVPSAFSLPKQKQPIKLSSV---RPTTQISCSRRRLVVRSYKVVIEHEGQTTELE 60
           MATLHFVPSAFSLPKQKQP KLSSV   RPTTQ+ CS+RRLVVRSYKVVIEHEGQTTELE
Sbjct: 1   MATLHFVPSAFSLPKQKQPTKLSSVFKLRPTTQLGCSQRRLVVRSYKVVIEHEGQTTELE 60

Query: 61  VDPDESILSSALDNGLEIPHDCKLGVCMTCPARLVSGTVDQSEGMLSDDVVAQGYSLLCV 120
           VD DESIL SALD GL+IPHDCKLGVCMTCPARLVSG VDQSEGMLSDDVV +GYSLLCV
Sbjct: 61  VDADESILDSALDKGLDIPHDCKLGVCMTCPARLVSGAVDQSEGMLSDDVVEKGYSLLCV 120

Query: 121 AYPRSDCHIKTIPEEELLALQLATAND 145
           AYPRSDCHI+TIPEEELLALQLATAND
Sbjct: 121 AYPRSDCHIQTIPEEELLALQLATAND 147

[Close]

BLAST of Chy6G111110 vs. ExPASy TrEMBL
Match: A0A6J1IWL8 (Ferredoxin OS=Cucurbita maxima OX=3661 GN=LOC111479154 PE=3 SV=1)

HSP 1 Score: 261.5 bits (667), Expect = 2.0e-66
Identity = 132/147 (89.80%), Postives = 137/147 (93.20%), Query Frame = 0


Query: 1   MATLHFVPSAFSLPKQKQPIKLSSV---RPTTQISCSRRRLVVRSYKVVIEHEGQTTELE 60
           MATLHFVPSAFSLPKQKQP KLSSV   R TTQI CS+RRLVVRSYKVVIEHEGQTTELE
Sbjct: 11  MATLHFVPSAFSLPKQKQPTKLSSVFKLRQTTQIGCSQRRLVVRSYKVVIEHEGQTTELE 70

Query: 61  VDPDESILSSALDNGLEIPHDCKLGVCMTCPARLVSGTVDQSEGMLSDDVVAQGYSLLCV 120
           VD DESIL+SALD GL+IPHDCKLGVCMTCPARLVSG VDQSEGMLSDDVV +GYSLLCV
Sbjct: 71  VDADESILNSALDKGLDIPHDCKLGVCMTCPARLVSGAVDQSEGMLSDDVVEKGYSLLCV 130

Query: 121 AYPRSDCHIKTIPEEELLALQLATAND 145
           AYPRSDCHI+TIPEEELLALQLATAND
Sbjct: 131 AYPRSDCHIQTIPEEELLALQLATAND 157

[Close]

BLAST of Chy6G111110 vs. NCBI nr
Match: XP_004134137.1 (ferredoxin C 1, chloroplastic [Cucumis sativus] >KGN56985.1 hypothetical protein Csa_010907 [Cucumis sativus])

HSP 1 Score: 290 bits (742), Expect = 7.91e-99
Identity = 144/144 (100.00%), Postives = 144/144 (100.00%), Query Frame = 0


Query: 1   MATLHFVPSAFSLPKQKQPIKLSSVRPTTQISCSRRRLVVRSYKVVIEHEGQTTELEVDP 60
           MATLHFVPSAFSLPKQKQPIKLSSVRPTTQISCSRRRLVVRSYKVVIEHEGQTTELEVDP
Sbjct: 1   MATLHFVPSAFSLPKQKQPIKLSSVRPTTQISCSRRRLVVRSYKVVIEHEGQTTELEVDP 60

Query: 61  DESILSSALDNGLEIPHDCKLGVCMTCPARLVSGTVDQSEGMLSDDVVAQGYSLLCVAYP 120
           DESILSSALDNGLEIPHDCKLGVCMTCPARLVSGTVDQSEGMLSDDVVAQGYSLLCVAYP
Sbjct: 61  DESILSSALDNGLEIPHDCKLGVCMTCPARLVSGTVDQSEGMLSDDVVAQGYSLLCVAYP 120

Query: 121 RSDCHIKTIPEEELLALQLATAND 144
           RSDCHIKTIPEEELLALQLATAND
Sbjct: 121 RSDCHIKTIPEEELLALQLATAND 144

[Close]

BLAST of Chy6G111110 vs. NCBI nr
Match: KAA0049364.1 (ferredoxin-1 [Cucumis melo var. makuwa] >TYK17194.1 ferredoxin-1 [Cucumis melo var. makuwa])

HSP 1 Score: 285 bits (729), Expect = 7.60e-97
Identity = 141/144 (97.92%), Postives = 142/144 (98.61%), Query Frame = 0


Query: 1   MATLHFVPSAFSLPKQKQPIKLSSVRPTTQISCSRRRLVVRSYKVVIEHEGQTTELEVDP 60
           MATLHFVPSAFSLPKQKQPIKLSSV+PTT ISCSRRRLVVRSYKVVIEHEGQTTELEVDP
Sbjct: 1   MATLHFVPSAFSLPKQKQPIKLSSVKPTTHISCSRRRLVVRSYKVVIEHEGQTTELEVDP 60

Query: 61  DESILSSALDNGLEIPHDCKLGVCMTCPARLVSGTVDQSEGMLSDDVVAQGYSLLCVAYP 120
           DESILSSALDNGLEIPHDCKLGVCMTCPARLVSGTVDQSEGMLSDDVV QGYSLLCVAYP
Sbjct: 61  DESILSSALDNGLEIPHDCKLGVCMTCPARLVSGTVDQSEGMLSDDVVEQGYSLLCVAYP 120

Query: 121 RSDCHIKTIPEEELLALQLATAND 144
           RSDCHIKTIPEEELLALQLATAND
Sbjct: 121 RSDCHIKTIPEEELLALQLATAND 144

[Close]

BLAST of Chy6G111110 vs. NCBI nr
Match: XP_008438679.1 (PREDICTED: ferredoxin-1 [Cucumis melo])

HSP 1 Score: 285 bits (729), Expect = 2.52e-96
Identity = 141/144 (97.92%), Postives = 142/144 (98.61%), Query Frame = 0


Query: 1   MATLHFVPSAFSLPKQKQPIKLSSVRPTTQISCSRRRLVVRSYKVVIEHEGQTTELEVDP 60
           MATLHFVPSAFSLPKQKQPIKLSSV+PTT ISCSRRRLVVRSYKVVIEHEGQTTELEVDP
Sbjct: 36  MATLHFVPSAFSLPKQKQPIKLSSVKPTTHISCSRRRLVVRSYKVVIEHEGQTTELEVDP 95

Query: 61  DESILSSALDNGLEIPHDCKLGVCMTCPARLVSGTVDQSEGMLSDDVVAQGYSLLCVAYP 120
           DESILSSALDNGLEIPHDCKLGVCMTCPARLVSGTVDQSEGMLSDDVV QGYSLLCVAYP
Sbjct: 96  DESILSSALDNGLEIPHDCKLGVCMTCPARLVSGTVDQSEGMLSDDVVEQGYSLLCVAYP 155

Query: 121 RSDCHIKTIPEEELLALQLATAND 144
           RSDCHIKTIPEEELLALQLATAND
Sbjct: 156 RSDCHIKTIPEEELLALQLATAND 179

[Close]

BLAST of Chy6G111110 vs. NCBI nr
Match: XP_023526556.1 (uncharacterized protein LOC111790026 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 265 bits (676), Expect = 1.02e-88
Identity = 133/147 (90.48%), Postives = 137/147 (93.20%), Query Frame = 0


Query: 1   MATLHFVPSAFSLPKQKQPIKLSSV---RPTTQISCSRRRLVVRSYKVVIEHEGQTTELE 60
           MATLHFVPSAFSLPKQKQP KLSSV   RPTTQI CS+RRLVVRSYKVVIEHEGQTTELE
Sbjct: 1   MATLHFVPSAFSLPKQKQPTKLSSVFKLRPTTQIGCSQRRLVVRSYKVVIEHEGQTTELE 60

Query: 61  VDPDESILSSALDNGLEIPHDCKLGVCMTCPARLVSGTVDQSEGMLSDDVVAQGYSLLCV 120
           VD DESIL SALD GL+IPHDCKLGVCMTCPARLVSG VDQSEGMLSDDVV +GYSLLCV
Sbjct: 61  VDADESILDSALDKGLDIPHDCKLGVCMTCPARLVSGAVDQSEGMLSDDVVEKGYSLLCV 120

Query: 121 AYPRSDCHIKTIPEEELLALQLATAND 144
           AYPRSDCHI+TIPEEELLALQLATAND
Sbjct: 121 AYPRSDCHIQTIPEEELLALQLATAND 147

[Close]

BLAST of Chy6G111110 vs. NCBI nr
Match: XP_022956084.1 (uncharacterized protein LOC111457884 [Cucurbita moschata] >KAG7018707.1 petF2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 264 bits (674), Expect = 2.06e-88
Identity = 132/147 (89.80%), Postives = 137/147 (93.20%), Query Frame = 0


Query: 1   MATLHFVPSAFSLPKQKQPIKLSSV---RPTTQISCSRRRLVVRSYKVVIEHEGQTTELE 60
           MATLHFVPSAFSLPKQKQP KLSSV   RPTTQ+ CS+RRLVVRSYKVVIEHEGQTTELE
Sbjct: 1   MATLHFVPSAFSLPKQKQPTKLSSVFKLRPTTQLGCSQRRLVVRSYKVVIEHEGQTTELE 60

Query: 61  VDPDESILSSALDNGLEIPHDCKLGVCMTCPARLVSGTVDQSEGMLSDDVVAQGYSLLCV 120
           VD DESIL SALD GL+IPHDCKLGVCMTCPARLVSG VDQSEGMLSDDVV +GYSLLCV
Sbjct: 61  VDADESILDSALDKGLDIPHDCKLGVCMTCPARLVSGAVDQSEGMLSDDVVEKGYSLLCV 120

Query: 121 AYPRSDCHIKTIPEEELLALQLATAND 144
           AYPRSDCHI+TIPEEELLALQLATAND
Sbjct: 121 AYPRSDCHIQTIPEEELLALQLATAND 147

[Close]

BLAST of Chy6G111110 vs. TAIR 10
Match: AT4G14890.1 (2Fe-2S ferredoxin-like superfamily protein )

HSP 1 Score: 183.7 bits (465), Expect = 1.0e-46
Identity = 86/139 (61.87%), Postives = 114/139 (82.01%), Query Frame = 0


Query: 6   FVPSAFSLPKQKQPIKLSSVRPTTQISCSRRRLVVRSYKVVIEHEGQTTELEVDPDESIL 65
           ++ ++FS P +   +  ++ R   +   +  R++ R+YKVV+EH+G+TTELEV+PDE+IL
Sbjct: 19  YLSNSFSFPLRNATLSTTTNR---RNFLTTGRIIARAYKVVVEHDGKTTELEVEPDETIL 78

Query: 66  SSALDNGLEIPHDCKLGVCMTCPARLVSGTVDQSEGMLSDDVVAQGYSLLCVAYPRSDCH 125
           S ALD+GL++P+DC LGVCMTCPA+LV+GTVDQS GMLSDDVV +GY+LLC +YP SDCH
Sbjct: 79  SKALDSGLDVPYDCNLGVCMTCPAKLVTGTVDQSGGMLSDDVVERGYTLLCASYPTSDCH 138

Query: 126 IKTIPEEELLALQLATAND 145
           IK IPEEELL+LQLATAND
Sbjct: 139 IKMIPEEELLSLQLATAND 154

[Close]

BLAST of Chy6G111110 vs. TAIR 10
Match: AT2G27510.1 (ferredoxin 3 )

HSP 1 Score: 90.9 bits (224), Expect = 9.1e-19
Identity = 45/94 (47.87%), Postives = 62/94 (65.96%), Query Frame = 0


Query: 43  YKV-VIEHEGQTTELEVDPDESILSSALDNGLEIPHDCKLGVCMTCPARLVSGTVDQSEG 102
           YKV ++  +GQ  E EV  D+ IL +A + G+++P+ C+ G C TC  ++VSG VDQS+G
Sbjct: 61  YKVKLLGPDGQEDEFEVQDDQYILDAAEEAGVDLPYSCRAGACSTCAGQIVSGNVDQSDG 120

Query: 103 -MLSDDVVAQGYSLLCVAYPRSDCHIKTIPEEEL 135
             L D  + +GY L CVAYP+SDC I T  E EL
Sbjct: 121 SFLEDSHLEKGYVLTCVAYPQSDCVIHTHKETEL 154

[Close]

BLAST of Chy6G111110 vs. TAIR 10
Match: AT5G10000.1 (ferredoxin 4 )

HSP 1 Score: 79.7 bits (195), Expect = 2.1e-15
Identity = 39/91 (42.86%), Postives = 57/91 (62.64%), Query Frame = 0


Query: 46  VIEHEGQTTELEVDPDESILSSALDNGLEIPHDCKLGVCMTCPARLVSGTVDQSEG-MLS 105
           +I  EG+  E+E + D  IL SA + GLE+P+ C+ G C TC  +LVSG VDQS G  L 
Sbjct: 58  LISPEGEEQEIEGNEDCCILESAENAGLELPYSCRSGTCGTCCGKLVSGKVDQSLGSFLE 117

Query: 106 DDVVAQGYSLLCVAYPRSDCHIKTIPEEELL 136
           ++ + +GY L C+A P  DC + T  + +L+
Sbjct: 118 EEQIQKGYILTCIALPLEDCVVYTHKQSDLI 148

[Close]

BLAST of Chy6G111110 vs. TAIR 10
Match: AT1G60950.1 (2Fe-2S ferredoxin-like superfamily protein )

HSP 1 Score: 79.0 bits (193), Expect = 3.6e-15
Identity = 40/102 (39.22%), Postives = 65/102 (63.73%), Query Frame = 0


Query: 36  RRLVVRSYKV-VIEHEGQTTELEVDPDESILSSALDNGLEIPHDCKLGVCMTCPARLVSG 95
           R   + +YKV  I  EG+  E+E D D  +L +A + G+++P+ C+ G C +C  ++VSG
Sbjct: 48  RVTAMATYKVKFITPEGE-LEVECDDDVYVLDAAEEAGIDLPYSCRAGSCSSCAGKVVSG 107

Query: 96  TVDQS-EGMLSDDVVAQGYSLLCVAYPRSDCHIKTIPEEELL 136
           +VDQS +  L D+ + +G+ L C AYP SD  I+T  EE+++
Sbjct: 108 SVDQSDQSFLDDEQIGEGFVLTCAAYPTSDVTIETHKEEDIV 148

[Close]

BLAST of Chy6G111110 vs. TAIR 10
Match: AT1G10960.1 (ferredoxin 1 )

HSP 1 Score: 78.6 bits (192), Expect = 4.7e-15
Identity = 52/140 (37.14%), Postives = 82/140 (58.57%), Query Frame = 0


Query: 7   VPSAFSLPKQKQPIKLSSVR-PTTQ------ISCSR--RRLVVRSYKV-VIEHEGQTTEL 66
           + S   L +Q+ PI L S+    TQ       S +R  R   + +YKV  I  EG+  E+
Sbjct: 10  IVSTSFLRRQQTPISLRSLPFANTQSLFGLKSSTARGGRVTAMATYKVKFITPEGE-QEV 69

Query: 67  EVDPDESILSSALDNGLEIPHDCKLGVCMTCPARLVSGTVDQS-EGMLSDDVVAQGYSLL 126
           E + D  +L +A + GL++P+ C+ G C +C  ++VSG++DQS +  L D+ +++GY L 
Sbjct: 70  ECEEDVYVLDAAEEAGLDLPYSCRAGSCSSCAGKVVSGSIDQSDQSFLDDEQMSEGYVLT 129

Query: 127 CVAYPRSDCHIKTIPEEELL 136
           CVAYP SD  I+T  EE ++
Sbjct: 130 CVAYPTSDVVIETHKEEAIM 148

The following BLAST results are available for this feature:

BLAST of Chy6G111110 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O23344	1.5e-45	61.87	Ferredoxin C 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FDC1 PE=1 SV=1	[more]
P08451	8.1e-20	47.96	Ferredoxin-2 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) O...	[more]
P00252	2.3e-19	50.00	Ferredoxin-1 OS=Desmonostoc muscorum OX=1179 PE=1 SV=2	[more]
P00248	4.0e-19	48.96	Ferredoxin OS=Mastigocladus laminosus OX=83541 GN=petF PE=1 SV=2	[more]
Q51577	8.9e-19	47.92	Ferredoxin-1 OS=Leptolyngbya boryana OX=1184 GN=petF1 PE=1 SV=1	[more]

BLAST of Chy6G111110 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L4U6	7.0e-75	100.00	Ferredoxin OS=Cucumis sativus OX=3659 GN=Csa_3G146700 PE=3 SV=1	[more]
A0A5D3D1U0	2.2e-73	97.92	Ferredoxin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G00400 PE=...	[more]
A0A1S3AX36	2.2e-73	97.92	Ferredoxin OS=Cucumis melo OX=3656 GN=LOC103483712 PE=3 SV=1	[more]
A0A6J1GY17	5.3e-67	89.80	Ferredoxin OS=Cucurbita moschata OX=3662 GN=LOC111457884 PE=3 SV=1	[more]
A0A6J1IWL8	2.0e-66	89.80	Ferredoxin OS=Cucurbita maxima OX=3661 GN=LOC111479154 PE=3 SV=1	[more]

BLAST of Chy6G111110 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004134137.1	7.91e-99	100.00	ferredoxin C 1, chloroplastic [Cucumis sativus] >KGN56985.1 hypothetical protein...	[more]
KAA0049364.1	7.60e-97	97.92	ferredoxin-1 [Cucumis melo var. makuwa] >TYK17194.1 ferredoxin-1 [Cucumis melo v...	[more]
XP_008438679.1	2.52e-96	97.92	PREDICTED: ferredoxin-1 [Cucumis melo]	[more]
XP_023526556.1	1.02e-88	90.48	uncharacterized protein LOC111790026 [Cucurbita pepo subsp. pepo]	[more]
XP_022956084.1	2.06e-88	89.80	uncharacterized protein LOC111457884 [Cucurbita moschata] >KAG7018707.1 petF2, p...	[more]

BLAST of Chy6G111110 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G14890.1	1.0e-46	61.87	2Fe-2S ferredoxin-like superfamily protein	[more]
AT2G27510.1	9.1e-19	47.87	ferredoxin 3	[more]
AT5G10000.1	2.1e-15	42.86	ferredoxin 4	[more]
AT1G60950.1	3.6e-15	39.22	2Fe-2S ferredoxin-like superfamily protein	[more]
AT1G10960.1	4.7e-15	37.14	ferredoxin 1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012675	Beta-grasp domain superfamily	GENE3D	3.10.20.30		coord: 40..142 e-value: 1.8E-27 score: 97.0
IPR010241	Ferredoxin [2Fe-2S], plant	TIGRFAM	TIGR02008	TIGR02008	coord: 42..134 e-value: 4.0E-26 score: 88.6
IPR001041	2Fe-2S ferredoxin-type iron-sulfur binding domain	PFAM	PF00111	Fer2	coord: 48..120 e-value: 3.1E-14 score: 52.7
IPR001041	2Fe-2S ferredoxin-type iron-sulfur binding domain	PROSITE	PS51085	2FE2S_FER_2	coord: 43..132 score: 12.199509
IPR001041	2Fe-2S ferredoxin-type iron-sulfur binding domain	CDD	cd00207	fer2	coord: 45..127 e-value: 3.37136E-23 score: 84.754
None	No IPR available	PANTHER	PTHR43112:SF9	FERREDOXIN C 1, CHLOROPLASTIC	coord: 1..139
None	No IPR available	PANTHER	PTHR43112	FERREDOXIN	coord: 1..139
IPR036010	2Fe-2S ferredoxin-like superfamily	SUPERFAMILY	54292	2Fe-2S ferredoxin-like	coord: 41..138

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy6G111110.1	Chy6G111110.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0022900	electron transport chain
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0051537	2 iron, 2 sulfur cluster binding
molecular_function	GO:0009055	electron transfer activity
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0051536	iron-sulfur cluster binding