Chy6G110920 (gene) Cucumber (hystrix) v1

Overview


Name	Chy6G110920
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Non-specific lipid-transfer protein-like protein
Location	chrH06: 3870922 .. 3871634 (+)
RNA-Seq Expression	Chy6G110920
Synteny	Chy6G110920

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAATACACAAAGATGGTGGTGGGTCTAGTTGCAGTTATCGTTGCTGTGCACTGGGCAGGAGCAGCTGCACAGTCTGACTGTACAAATGTGCTGATCAGCATGGCACCTTGCCTGAATTATATTACAGGGAACTCCTCTACCCCATCACAATCATGCTGCACACAGCTTTCAAATGTTGTCCGTTCAAATCCACAGTGCTTGTGCCAGGTCCTGAATGGTGGTGGCTCATCGCTTGGGGTGAATATCAACCAAACACAGGCCCTAGCTCTGCCCCAAGCTTGCAACGTTCAGACCCCATCTGTCAGCAGCTGCAATGGTAAGCATACCAATCTCTATCACCAGCTGCATGTTATTTATTAATAGATAATGAAGATATGAACTAATATCAATCTCTATCTAAAGTGCTAACTTGTGATACCTGAAAATTTGCCAGTTGATTCTCCCGCCGGCTCTCCAGCAGGAGCACCAGACTCTTCAAACAATGTTCCTTCAGGTATAAACATAAAAGAAAATACTTTTAATTGTATGCTTGGTCAGTTCATTCACACGGTCAATTAAAGTACCTAACTGCTTGTGCAGGAACTGGATCTAAGACTGTTCCATCAACAGACAATGGCTCATCAGACGGAAGCTCCATCCATATGTCAAAACCTCTACTATTCTCCATCTTGTTGGCTTCTATATATGCTTCAGCTTTCAAGTTGTACTGA

mRNA sequence

ATGGAATACACAAAGATGGTGGTGGGTCTAGTTGCAGTTATCGTTGCTGTGCACTGGGCAGGAGCAGCTGCACAGTCTGACTGTACAAATGTGCTGATCAGCATGGCACCTTGCCTGAATTATATTACAGGGAACTCCTCTACCCCATCACAATCATGCTGCACACAGCTTTCAAATGTTGTCCGTTCAAATCCACAGTGCTTGTGCCAGGTCCTGAATGGTGGTGGCTCATCGCTTGGGGTGAATATCAACCAAACACAGGCCCTAGCTCTGCCCCAAGCTTGCAACGTTCAGACCCCATCTGTCAGCAGCTGCAATGTTGATTCTCCCGCCGGCTCTCCAGCAGGAGCACCAGACTCTTCAAACAATGTTCCTTCAGGAACTGGATCTAAGACTGTTCCATCAACAGACAATGGCTCATCAGACGGAAGCTCCATCCATATGTCAAAACCTCTACTATTCTCCATCTTGTTGGCTTCTATATATGCTTCAGCTTTCAAGTTGTACTGA

Coding sequence (CDS)

ATGGAATACACAAAGATGGTGGTGGGTCTAGTTGCAGTTATCGTTGCTGTGCACTGGGCAGGAGCAGCTGCACAGTCTGACTGTACAAATGTGCTGATCAGCATGGCACCTTGCCTGAATTATATTACAGGGAACTCCTCTACCCCATCACAATCATGCTGCACACAGCTTTCAAATGTTGTCCGTTCAAATCCACAGTGCTTGTGCCAGGTCCTGAATGGTGGTGGCTCATCGCTTGGGGTGAATATCAACCAAACACAGGCCCTAGCTCTGCCCCAAGCTTGCAACGTTCAGACCCCATCTGTCAGCAGCTGCAATGTTGATTCTCCCGCCGGCTCTCCAGCAGGAGCACCAGACTCTTCAAACAATGTTCCTTCAGGAACTGGATCTAAGACTGTTCCATCAACAGACAATGGCTCATCAGACGGAAGCTCCATCCATATGTCAAAACCTCTACTATTCTCCATCTTGTTGGCTTCTATATATGCTTCAGCTTTCAAGTTGTACTGA

Protein sequence

MEYTKMVVGLVAVIVAVHWAGAAAQSDCTNVLISMAPCLNYITGNSSTPSQSCCTQLSNVVRSNPQCLCQVLNGGGSSLGVNINQTQALALPQACNVQTPSVSSCNVDSPAGSPAGAPDSSNNVPSGTGSKTVPSTDNGSSDGSSIHMSKPLLFSILLASIYASAFKLY*

Homology

[Close]

BLAST of Chy6G110920 vs. ExPASy Swiss-Prot
Match: Q9LJ86 (Non-specific lipid transfer protein GPI-anchored 5 OS=Arabidopsis thaliana OX=3702 GN=LTPG5 PE=2 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 3.8e-37
Identity = 94/160 (58.75%), Postives = 111/160 (69.38%), Query Frame = 0


Query: 5   KMVVGLVAVIV---AVHWAGAAAQSDCTNVLISMAPCLNYITGNSSTPSQSCCTQLSNVV 64
           KM +GLV + V    +     +AQS CTN LISM+PCLNYITGNS++P+Q CC QLS VV
Sbjct: 2   KMEMGLVFLTVFMAVMSSTMVSAQSSCTNALISMSPCLNYITGNSTSPNQQCCNQLSRVV 61

Query: 65  RSNPQCLCQVLNGGGSSLGVNINQTQALALPQACNVQTPSVSSCNVDSPAG-----SPAG 124
           +S+P CLCQVLNGGGS LG+N+NQTQAL LP+ACNVQTP VS CN     G     SPA 
Sbjct: 62  QSSPDCLCQVLNGGGSQLGINVNQTQALGLPRACNVQTPPVSRCNTGGGGGGSTSDSPAE 121

Query: 125 APDSSNNVPSGTGSKTVPSTDNG---SSDGSSIHMSKPLL 154
           +P+SS     G GSKTVP  +     SSDGSSI  S PL+
Sbjct: 122 SPNSSG---PGNGSKTVPVGEGDGPPSSDGSSIKFSFPLI 158

[Close]

BLAST of Chy6G110920 vs. ExPASy Swiss-Prot
Match: Q2PE59 (Non-specific lipid transfer protein GPI-anchored 26 OS=Arabidopsis thaliana OX=3702 GN=LTPG26 PE=2 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 9.1e-31
Identity = 79/147 (53.74%), Postives = 99/147 (67.35%), Query Frame = 0


Query: 23  AAQSDCTNVLISMAPCLNYITGNSSTPSQSCCTQLSNVVRSNPQCLCQVLNGGGSSLGVN 82
           +AQS CTNVLISMAPCL++IT N+S PSQ CC QL++VVR + +CLCQVL+GGGS LG+N
Sbjct: 21  SAQSSCTNVLISMAPCLSFITQNTSLPSQQCCNQLAHVVRYSSECLCQVLDGGGSQLGIN 80

Query: 83  INQTQALALPQACNVQTPSVSSCNVDSPAGSPAGAPDSSNNVPSGTGSKTVPSTDNGSSD 142
           +N+TQALALP+AC+V+TP  S C+  S   S         +   G GSKTVP  +  SSD
Sbjct: 81  VNETQALALPKACHVETPPASRCHSGSSVNS---------HSEHGNGSKTVP-REKSSSD 140

Query: 143 GSSIHMSKPLLFSILLASIYASAFKLY 170
           G SI  S PLL  +  AS     +  Y
Sbjct: 141 G-SIKFSFPLLAILFTASYITLIYAKY 156

[Close]

BLAST of Chy6G110920 vs. ExPASy Swiss-Prot
Match: Q7EB72 (Non-specific lipid transfer protein GPI-anchored 15 OS=Arabidopsis thaliana OX=3702 GN=LTPG15 PE=2 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 2.2e-24
Identity = 70/179 (39.11%), Postives = 102/179 (56.98%), Query Frame = 0


Query: 1   MEYTKMVVGLVAVIVAVHWAGAAAQ--SDCTNVLISMAPCLNYITGNSSTPSQSCCTQLS 60
           M Y +        +VA  W+   AQ  S C + L +++PCL+YITGNS+TPSQ CC++L 
Sbjct: 1   MGYRRSYAITFVALVAALWSVTKAQPSSSCVSTLTTLSPCLSYITGNSTTPSQPCCSRLD 60

Query: 61  NVVRSNPQCLCQVLNGGGSSLGVNINQTQALALPQACNVQTPSVSSCNVDSPAGSPAGAP 120
           +V++S+PQC+C  +N    ++G+NIN+TQAL LP ACN+QTP ++ CN  +   +   AP
Sbjct: 61  SVIKSSPQCICSAVNSPIPNIGLNINRTQALQLPNACNIQTPPLTQCNAATGPTAQPPAP 120

Query: 121 DSSNNVPS---------------GTGSKTVPSTDNGSS----DGSSIHMSKPLLFSILL 159
             +   P                G GSKTVPS   GSS    D   +H    L+F++L+
Sbjct: 121 SPTEKTPDVTLTPTSLPGARSGVGGGSKTVPSVGTGSSSRNVDPLPLHF---LMFAVLV 176

[Close]

BLAST of Chy6G110920 vs. ExPASy Swiss-Prot
Match: F4HZB9 (Non-specific lipid transfer protein GPI-anchored 19 OS=Arabidopsis thaliana OX=3702 GN=LTPG19 PE=3 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 1.3e-21
Identity = 70/161 (43.48%), Postives = 96/161 (59.63%), Query Frame = 0


Query: 6   MVVGLVAVIVAVHWAGAA--AQSDCTNVLISMAPCLNYITGNSSTPSQSCCTQLSNVVRS 65
           M++ ++A+++A    G A   Q+ C + L S++PCL Y+ G SS+PS SCC Q S VV+S
Sbjct: 1   MILAILALVIATFLYGGATTVQAGCRDTLTSLSPCLYYLNGGSSSPSWSCCRQFSTVVQS 60

Query: 66  NPQCLCQVLNGGGSSL-GVNINQTQALALPQACNVQTPSVSSCNVDS------PAGSPAG 125
           +P+CLC V+N   SS  G   N+T AL LP ACNVQTPS S CN         PA +P G
Sbjct: 61  SPECLCSVVNSNESSFYGFKFNRTLALNLPTACNVQTPSPSLCNTGGNVPTTLPANTPVG 120

Query: 126 APDSSNNVPSGT--------GSKTVPSTDNGSSDGSSIHMS 150
           +P S+ + PSGT        GSK  P ++  SS  + I +S
Sbjct: 121 SPRSAPS-PSGTTSPANTPSGSKKFPLSNESSSKSNVIILS 160

[Close]

BLAST of Chy6G110920 vs. ExPASy Swiss-Prot
Match: Q9ZQI8 (Non-specific lipid transfer protein GPI-anchored 11 OS=Arabidopsis thaliana OX=3702 GN=LTPG11 PE=2 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 1.2e-11
Identity = 50/165 (30.30%), Postives = 90/165 (54.55%), Query Frame = 0


Query: 7   VVGLVAVIVAVHWAGAAAQSDCTNVLISMAPCLNYITGNSST--PSQSCCTQLSNVVRSN 66
           ++ + +V+  +    A A  DC++++++MA CL+++T  S+   P  +CC+ L  VVR+ 
Sbjct: 6   ILMIFSVVALMSGERAHAAVDCSSLILNMADCLSFVTSGSTVVKPEGTCCSGLKTVVRTG 65

Query: 67  PQCLCQVLNGGGSSLGVNINQTQALALPQACNVQTPSVSSCNV----DSPAGSPAGAPDS 126
           P+CLC+     G SLG+ ++ ++A +LP  C V  P  + C +    D PA +P  +P +
Sbjct: 66  PECLCEAFKNSG-SLGLTLDLSKAASLPSVCKVAAPPSARCGLSVSGDPPATAPGLSPTA 125

Query: 127 SNNVP--SGTGSKTVPSTDNGSSDGSSIHMSKP-LLFSILLASIY 163
               P  S   +   P +   SSD S + +S   ++F  L++S Y
Sbjct: 126 GAGAPALSSGANAATPVSSPRSSDASLLSVSFAFVIFMALISSFY 169

[Close]

BLAST of Chy6G110920 vs. ExPASy TrEMBL
Match: A0A0A0L5G6 (AAI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G146490 PE=3 SV=1)

HSP 1 Score: 320.9 bits (821), Expect = 3.3e-84
Identity = 168/169 (99.41%), Postives = 169/169 (100.00%), Query Frame = 0


Query: 1   MEYTKMVVGLVAVIVAVHWAGAAAQSDCTNVLISMAPCLNYITGNSSTPSQSCCTQLSNV 60
           MEYT+MVVGLVAVIVAVHWAGAAAQSDCTNVLISMAPCLNYITGNSSTPSQSCCTQLSNV
Sbjct: 1   MEYTRMVVGLVAVIVAVHWAGAAAQSDCTNVLISMAPCLNYITGNSSTPSQSCCTQLSNV 60

Query: 61  VRSNPQCLCQVLNGGGSSLGVNINQTQALALPQACNVQTPSVSSCNVDSPAGSPAGAPDS 120
           VRSNPQCLCQVLNGGGSSLGVNINQTQALALPQACNVQTPSVSSCNVDSPAGSPAGAPDS
Sbjct: 61  VRSNPQCLCQVLNGGGSSLGVNINQTQALALPQACNVQTPSVSSCNVDSPAGSPAGAPDS 120

Query: 121 SNNVPSGTGSKTVPSTDNGSSDGSSIHMSKPLLFSILLASIYASAFKLY 170
           SNNVPSGTGSKTVPSTDNGSSDGSSIHMSKPLLFSILLASIYASAFKLY
Sbjct: 121 SNNVPSGTGSKTVPSTDNGSSDGSSIHMSKPLLFSILLASIYASAFKLY 169

[Close]

BLAST of Chy6G110920 vs. ExPASy TrEMBL
Match: A0A5D3D0R3 (Non-specific lipid-transfer protein-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G00570 PE=3 SV=1)

HSP 1 Score: 312.8 bits (800), Expect = 9.0e-82
Identity = 163/169 (96.45%), Postives = 167/169 (98.82%), Query Frame = 0


Query: 1   MEYTKMVVGLVAVIVAVHWAGAAAQSDCTNVLISMAPCLNYITGNSSTPSQSCCTQLSNV 60
           MEYT+MV GLVAVIVAVHWAGAAAQSDCTNVLISMAPCLNYITGNSSTPSQSCCTQLS+V
Sbjct: 1   MEYTRMVAGLVAVIVAVHWAGAAAQSDCTNVLISMAPCLNYITGNSSTPSQSCCTQLSSV 60

Query: 61  VRSNPQCLCQVLNGGGSSLGVNINQTQALALPQACNVQTPSVSSCNVDSPAGSPAGAPDS 120
           VRS PQCLCQVLNGGG+SLGVNINQTQALALPQACNVQTPSVSSCNVDSPAGSPAGAPDS
Sbjct: 61  VRSQPQCLCQVLNGGGASLGVNINQTQALALPQACNVQTPSVSSCNVDSPAGSPAGAPDS 120

Query: 121 SNNVPSGTGSKTVPSTDNGSSDGSSIHMSKPLLFSILLASIYASAFKLY 170
           SNNVPSGTGSKTVPSTDNGSSDGSSIH+SKPLLFSILLASIYASAFKLY
Sbjct: 121 SNNVPSGTGSKTVPSTDNGSSDGSSIHLSKPLLFSILLASIYASAFKLY 169

[Close]

BLAST of Chy6G110920 vs. ExPASy TrEMBL
Match: A0A1S3AX08 (non-specific lipid-transfer protein-like protein At2g13820 OS=Cucumis melo OX=3656 GN=LOC103483695 PE=3 SV=1)

HSP 1 Score: 312.8 bits (800), Expect = 9.0e-82
Identity = 163/169 (96.45%), Postives = 167/169 (98.82%), Query Frame = 0


Query: 1   MEYTKMVVGLVAVIVAVHWAGAAAQSDCTNVLISMAPCLNYITGNSSTPSQSCCTQLSNV 60
           MEYT+MV GLVAVIVAVHWAGAAAQSDCTNVLISMAPCLNYITGNSSTPSQSCCTQLS+V
Sbjct: 1   MEYTRMVAGLVAVIVAVHWAGAAAQSDCTNVLISMAPCLNYITGNSSTPSQSCCTQLSSV 60

Query: 61  VRSNPQCLCQVLNGGGSSLGVNINQTQALALPQACNVQTPSVSSCNVDSPAGSPAGAPDS 120
           VRS PQCLCQVLNGGG+SLGVNINQTQALALPQACNVQTPSVSSCNVDSPAGSPAGAPDS
Sbjct: 61  VRSQPQCLCQVLNGGGASLGVNINQTQALALPQACNVQTPSVSSCNVDSPAGSPAGAPDS 120

Query: 121 SNNVPSGTGSKTVPSTDNGSSDGSSIHMSKPLLFSILLASIYASAFKLY 170
           SNNVPSGTGSKTVPSTDNGSSDGSSIH+SKPLLFSILLASIYASAFKLY
Sbjct: 121 SNNVPSGTGSKTVPSTDNGSSDGSSIHLSKPLLFSILLASIYASAFKLY 169

[Close]

BLAST of Chy6G110920 vs. ExPASy TrEMBL
Match: A0A6J1IEC3 (non-specific lipid-transfer protein-like protein At2g13820 OS=Cucurbita maxima OX=3661 GN=LOC111474858 PE=3 SV=1)

HSP 1 Score: 284.3 bits (726), Expect = 3.4e-73
Identity = 148/169 (87.57%), Postives = 157/169 (92.90%), Query Frame = 0


Query: 1   MEYTKMVVGLVAVIVAVHWAGAAAQSDCTNVLISMAPCLNYITGNSSTPSQSCCTQLSNV 60
           M   KMV+ L+AVIVAVHWAGAAAQSDCTNVLIS++PCLNYITGNSSTPSQ CCTQL+ V
Sbjct: 1   MAQGKMVMALLAVIVAVHWAGAAAQSDCTNVLISLSPCLNYITGNSSTPSQGCCTQLATV 60

Query: 61  VRSNPQCLCQVLNGGGSSLGVNINQTQALALPQACNVQTPSVSSCNVDSPAGSPAGAPDS 120
           VRS PQCLCQVLNGGGSSLGVNINQTQALALPQACNVQTPS+SSCNV SP GSPAG+P+S
Sbjct: 61  VRSQPQCLCQVLNGGGSSLGVNINQTQALALPQACNVQTPSISSCNVASPTGSPAGSPES 120

Query: 121 SNNVPSGTGSKTVPSTDNGSSDGSSIHMSKPLLFSILLASIYASAFKLY 170
           SNNVPSGTGSKTVPS DN SSDGSSIH+SKPLLFSILLAS YASAFKLY
Sbjct: 121 SNNVPSGTGSKTVPSPDNNSSDGSSIHLSKPLLFSILLASTYASAFKLY 169

[Close]

BLAST of Chy6G110920 vs. ExPASy TrEMBL
Match: A0A6J1F2M0 (non-specific lipid-transfer protein-like protein At2g13820 OS=Cucurbita moschata OX=3662 GN=LOC111441577 PE=3 SV=1)

HSP 1 Score: 283.5 bits (724), Expect = 5.9e-73
Identity = 148/169 (87.57%), Postives = 157/169 (92.90%), Query Frame = 0


Query: 1   MEYTKMVVGLVAVIVAVHWAGAAAQSDCTNVLISMAPCLNYITGNSSTPSQSCCTQLSNV 60
           M   KMV+ L+AVIVAVHWAGAAAQSDCTNVLIS++PCLNYITGNSSTPSQ CCTQL+ V
Sbjct: 1   MAQGKMVMTLLAVIVAVHWAGAAAQSDCTNVLISLSPCLNYITGNSSTPSQGCCTQLATV 60

Query: 61  VRSNPQCLCQVLNGGGSSLGVNINQTQALALPQACNVQTPSVSSCNVDSPAGSPAGAPDS 120
           VRS PQCLCQVLNGGGSSLGVNINQTQALALPQACNVQTPS+SSCNV SP GSPAG+P+S
Sbjct: 61  VRSQPQCLCQVLNGGGSSLGVNINQTQALALPQACNVQTPSISSCNVASPTGSPAGSPES 120

Query: 121 SNNVPSGTGSKTVPSTDNGSSDGSSIHMSKPLLFSILLASIYASAFKLY 170
           SNNVPSGTGSKTVPS DN SSDGSSIH+SKPLLFSILLAS YASAFKLY
Sbjct: 121 SNNVPSGTGSKTVPSPDNNSSDGSSIHLSKPLLFSILLASTYASAFKLY 169

[Close]

BLAST of Chy6G110920 vs. NCBI nr
Match: XP_004134131.1 (non-specific lipid-transfer protein-like protein At2g13820 [Cucumis sativus] >KGN56963.1 hypothetical protein Csa_011105 [Cucumis sativus])

HSP 1 Score: 322 bits (826), Expect = 8.07e-111
Identity = 168/169 (99.41%), Postives = 169/169 (100.00%), Query Frame = 0


Query: 1   MEYTKMVVGLVAVIVAVHWAGAAAQSDCTNVLISMAPCLNYITGNSSTPSQSCCTQLSNV 60
           MEYT+MVVGLVAVIVAVHWAGAAAQSDCTNVLISMAPCLNYITGNSSTPSQSCCTQLSNV
Sbjct: 1   MEYTRMVVGLVAVIVAVHWAGAAAQSDCTNVLISMAPCLNYITGNSSTPSQSCCTQLSNV 60

Query: 61  VRSNPQCLCQVLNGGGSSLGVNINQTQALALPQACNVQTPSVSSCNVDSPAGSPAGAPDS 120
           VRSNPQCLCQVLNGGGSSLGVNINQTQALALPQACNVQTPSVSSCNVDSPAGSPAGAPDS
Sbjct: 61  VRSNPQCLCQVLNGGGSSLGVNINQTQALALPQACNVQTPSVSSCNVDSPAGSPAGAPDS 120

Query: 121 SNNVPSGTGSKTVPSTDNGSSDGSSIHMSKPLLFSILLASIYASAFKLY 169
           SNNVPSGTGSKTVPSTDNGSSDGSSIHMSKPLLFSILLASIYASAFKLY
Sbjct: 121 SNNVPSGTGSKTVPSTDNGSSDGSSIHMSKPLLFSILLASIYASAFKLY 169

[Close]

BLAST of Chy6G110920 vs. NCBI nr
Match: XP_008438652.1 (PREDICTED: non-specific lipid-transfer protein-like protein At2g13820 [Cucumis melo] >KAA0049348.1 non-specific lipid-transfer protein-like protein [Cucumis melo var. makuwa] >TYK17210.1 non-specific lipid-transfer protein-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 314 bits (805), Expect = 1.28e-107
Identity = 163/169 (96.45%), Postives = 167/169 (98.82%), Query Frame = 0


Query: 1   MEYTKMVVGLVAVIVAVHWAGAAAQSDCTNVLISMAPCLNYITGNSSTPSQSCCTQLSNV 60
           MEYT+MV GLVAVIVAVHWAGAAAQSDCTNVLISMAPCLNYITGNSSTPSQSCCTQLS+V
Sbjct: 1   MEYTRMVAGLVAVIVAVHWAGAAAQSDCTNVLISMAPCLNYITGNSSTPSQSCCTQLSSV 60

Query: 61  VRSNPQCLCQVLNGGGSSLGVNINQTQALALPQACNVQTPSVSSCNVDSPAGSPAGAPDS 120
           VRS PQCLCQVLNGGG+SLGVNINQTQALALPQACNVQTPSVSSCNVDSPAGSPAGAPDS
Sbjct: 61  VRSQPQCLCQVLNGGGASLGVNINQTQALALPQACNVQTPSVSSCNVDSPAGSPAGAPDS 120

Query: 121 SNNVPSGTGSKTVPSTDNGSSDGSSIHMSKPLLFSILLASIYASAFKLY 169
           SNNVPSGTGSKTVPSTDNGSSDGSSIH+SKPLLFSILLASIYASAFKLY
Sbjct: 121 SNNVPSGTGSKTVPSTDNGSSDGSSIHLSKPLLFSILLASIYASAFKLY 169

[Close]

BLAST of Chy6G110920 vs. NCBI nr
Match: XP_038902233.1 (non-specific lipid transfer protein GPI-anchored 19 [Benincasa hispida])

HSP 1 Score: 290 bits (742), Expect = 5.16e-98
Identity = 148/169 (87.57%), Postives = 160/169 (94.67%), Query Frame = 0


Query: 1   MEYTKMVVGLVAVIVAVHWAGAAAQSDCTNVLISMAPCLNYITGNSSTPSQSCCTQLSNV 60
           ME+T+MV+GLV V VAVHWAG AAQSDCTNVLIS++PCLNYITGNSSTPSQ+CCTQL++V
Sbjct: 1   MEHTRMVMGLVVVFVAVHWAGVAAQSDCTNVLISLSPCLNYITGNSSTPSQTCCTQLASV 60

Query: 61  VRSNPQCLCQVLNGGGSSLGVNINQTQALALPQACNVQTPSVSSCNVDSPAGSPAGAPDS 120
           VRS PQCLCQVLNGGGSSLGVNINQTQALALP+ACNVQTPS+SSCNVDSP  SPAGAPDS
Sbjct: 61  VRSQPQCLCQVLNGGGSSLGVNINQTQALALPRACNVQTPSISSCNVDSPTSSPAGAPDS 120

Query: 121 SNNVPSGTGSKTVPSTDNGSSDGSSIHMSKPLLFSILLASIYASAFKLY 169
           SNNVPSGTGSKTVPSTDN +SDGSSI +SKPLLFSILLAS YASAFKLY
Sbjct: 121 SNNVPSGTGSKTVPSTDNDASDGSSIQLSKPLLFSILLASTYASAFKLY 169

[Close]

BLAST of Chy6G110920 vs. NCBI nr
Match: XP_022974389.1 (non-specific lipid-transfer protein-like protein At2g13820 [Cucurbita maxima] >XP_022975120.1 non-specific lipid-transfer protein-like protein At2g13820 [Cucurbita maxima] >XP_022975476.1 non-specific lipid-transfer protein-like protein At2g13820 isoform X1 [Cucurbita maxima])

HSP 1 Score: 286 bits (731), Expect = 2.45e-96
Identity = 148/169 (87.57%), Postives = 157/169 (92.90%), Query Frame = 0


Query: 1   MEYTKMVVGLVAVIVAVHWAGAAAQSDCTNVLISMAPCLNYITGNSSTPSQSCCTQLSNV 60
           M   KMV+ L+AVIVAVHWAGAAAQSDCTNVLIS++PCLNYITGNSSTPSQ CCTQL+ V
Sbjct: 1   MAQGKMVMALLAVIVAVHWAGAAAQSDCTNVLISLSPCLNYITGNSSTPSQGCCTQLATV 60

Query: 61  VRSNPQCLCQVLNGGGSSLGVNINQTQALALPQACNVQTPSVSSCNVDSPAGSPAGAPDS 120
           VRS PQCLCQVLNGGGSSLGVNINQTQALALPQACNVQTPS+SSCNV SP GSPAG+P+S
Sbjct: 61  VRSQPQCLCQVLNGGGSSLGVNINQTQALALPQACNVQTPSISSCNVASPTGSPAGSPES 120

Query: 121 SNNVPSGTGSKTVPSTDNGSSDGSSIHMSKPLLFSILLASIYASAFKLY 169
           SNNVPSGTGSKTVPS DN SSDGSSIH+SKPLLFSILLAS YASAFKLY
Sbjct: 121 SNNVPSGTGSKTVPSPDNNSSDGSSIHLSKPLLFSILLASTYASAFKLY 169

[Close]

BLAST of Chy6G110920 vs. NCBI nr
Match: XP_022934392.1 (non-specific lipid-transfer protein-like protein At2g13820 [Cucurbita moschata] >XP_023539478.1 non-specific lipid-transfer protein-like protein At2g13820 [Cucurbita pepo subsp. pepo] >KAG7028894.1 Non-specific lipid-transfer protein-like protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 285 bits (729), Expect = 4.95e-96
Identity = 148/169 (87.57%), Postives = 157/169 (92.90%), Query Frame = 0


Query: 1   MEYTKMVVGLVAVIVAVHWAGAAAQSDCTNVLISMAPCLNYITGNSSTPSQSCCTQLSNV 60
           M   KMV+ L+AVIVAVHWAGAAAQSDCTNVLIS++PCLNYITGNSSTPSQ CCTQL+ V
Sbjct: 1   MAQGKMVMTLLAVIVAVHWAGAAAQSDCTNVLISLSPCLNYITGNSSTPSQGCCTQLATV 60

Query: 61  VRSNPQCLCQVLNGGGSSLGVNINQTQALALPQACNVQTPSVSSCNVDSPAGSPAGAPDS 120
           VRS PQCLCQVLNGGGSSLGVNINQTQALALPQACNVQTPS+SSCNV SP GSPAG+P+S
Sbjct: 61  VRSQPQCLCQVLNGGGSSLGVNINQTQALALPQACNVQTPSISSCNVASPTGSPAGSPES 120

Query: 121 SNNVPSGTGSKTVPSTDNGSSDGSSIHMSKPLLFSILLASIYASAFKLY 169
           SNNVPSGTGSKTVPS DN SSDGSSIH+SKPLLFSILLAS YASAFKLY
Sbjct: 121 SNNVPSGTGSKTVPSPDNNSSDGSSIHLSKPLLFSILLASTYASAFKLY 169

[Close]

BLAST of Chy6G110920 vs. TAIR 10
Match: AT3G22600.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 156.0 bits (393), Expect = 2.7e-38
Identity = 94/160 (58.75%), Postives = 111/160 (69.38%), Query Frame = 0


Query: 5   KMVVGLVAVIV---AVHWAGAAAQSDCTNVLISMAPCLNYITGNSSTPSQSCCTQLSNVV 64
           KM +GLV + V    +     +AQS CTN LISM+PCLNYITGNS++P+Q CC QLS VV
Sbjct: 2   KMEMGLVFLTVFMAVMSSTMVSAQSSCTNALISMSPCLNYITGNSTSPNQQCCNQLSRVV 61

Query: 65  RSNPQCLCQVLNGGGSSLGVNINQTQALALPQACNVQTPSVSSCNVDSPAG-----SPAG 124
           +S+P CLCQVLNGGGS LG+N+NQTQAL LP+ACNVQTP VS CN     G     SPA 
Sbjct: 62  QSSPDCLCQVLNGGGSQLGINVNQTQALGLPRACNVQTPPVSRCNTGGGGGGSTSDSPAE 121

Query: 125 APDSSNNVPSGTGSKTVPSTDNG---SSDGSSIHMSKPLL 154
           +P+SS     G GSKTVP  +     SSDGSSI  S PL+
Sbjct: 122 SPNSSG---PGNGSKTVPVGEGDGPPSSDGSSIKFSFPLI 158

[Close]

BLAST of Chy6G110920 vs. TAIR 10
Match: AT4G14815.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 134.8 bits (338), Expect = 6.5e-32
Identity = 79/147 (53.74%), Postives = 99/147 (67.35%), Query Frame = 0


Query: 23  AAQSDCTNVLISMAPCLNYITGNSSTPSQSCCTQLSNVVRSNPQCLCQVLNGGGSSLGVN 82
           +AQS CTNVLISMAPCL++IT N+S PSQ CC QL++VVR + +CLCQVL+GGGS LG+N
Sbjct: 21  SAQSSCTNVLISMAPCLSFITQNTSLPSQQCCNQLAHVVRYSSECLCQVLDGGGSQLGIN 80

Query: 83  INQTQALALPQACNVQTPSVSSCNVDSPAGSPAGAPDSSNNVPSGTGSKTVPSTDNGSSD 142
           +N+TQALALP+AC+V+TP  S C+  S   S         +   G GSKTVP  +  SSD
Sbjct: 81  VNETQALALPKACHVETPPASRCHSGSSVNS---------HSEHGNGSKTVP-REKSSSD 140

Query: 143 GSSIHMSKPLLFSILLASIYASAFKLY 170
           G SI  S PLL  +  AS     +  Y
Sbjct: 141 G-SIKFSFPLLAILFTASYITLIYAKY 156

[Close]

BLAST of Chy6G110920 vs. TAIR 10
Match: AT2G48130.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 113.6 bits (283), Expect = 1.5e-25
Identity = 70/179 (39.11%), Postives = 102/179 (56.98%), Query Frame = 0


Query: 1   MEYTKMVVGLVAVIVAVHWAGAAAQ--SDCTNVLISMAPCLNYITGNSSTPSQSCCTQLS 60
           M Y +        +VA  W+   AQ  S C + L +++PCL+YITGNS+TPSQ CC++L 
Sbjct: 1   MGYRRSYAITFVALVAALWSVTKAQPSSSCVSTLTTLSPCLSYITGNSTTPSQPCCSRLD 60

Query: 61  NVVRSNPQCLCQVLNGGGSSLGVNINQTQALALPQACNVQTPSVSSCNVDSPAGSPAGAP 120
           +V++S+PQC+C  +N    ++G+NIN+TQAL LP ACN+QTP ++ CN  +   +   AP
Sbjct: 61  SVIKSSPQCICSAVNSPIPNIGLNINRTQALQLPNACNIQTPPLTQCNAATGPTAQPPAP 120

Query: 121 DSSNNVPS---------------GTGSKTVPSTDNGSS----DGSSIHMSKPLLFSILL 159
             +   P                G GSKTVPS   GSS    D   +H    L+F++L+
Sbjct: 121 SPTEKTPDVTLTPTSLPGARSGVGGGSKTVPSVGTGSSSRNVDPLPLHF---LMFAVLV 176

[Close]

BLAST of Chy6G110920 vs. TAIR 10
Match: AT1G03103.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 104.4 bits (259), Expect = 9.4e-23
Identity = 70/161 (43.48%), Postives = 96/161 (59.63%), Query Frame = 0


Query: 6   MVVGLVAVIVAVHWAGAA--AQSDCTNVLISMAPCLNYITGNSSTPSQSCCTQLSNVVRS 65
           M++ ++A+++A    G A   Q+ C + L S++PCL Y+ G SS+PS SCC Q S VV+S
Sbjct: 1   MILAILALVIATFLYGGATTVQAGCRDTLTSLSPCLYYLNGGSSSPSWSCCRQFSTVVQS 60

Query: 66  NPQCLCQVLNGGGSSL-GVNINQTQALALPQACNVQTPSVSSCNVDS------PAGSPAG 125
           +P+CLC V+N   SS  G   N+T AL LP ACNVQTPS S CN         PA +P G
Sbjct: 61  SPECLCSVVNSNESSFYGFKFNRTLALNLPTACNVQTPSPSLCNTGGNVPTTLPANTPVG 120

Query: 126 APDSSNNVPSGT--------GSKTVPSTDNGSSDGSSIHMS 150
           +P S+ + PSGT        GSK  P ++  SS  + I +S
Sbjct: 121 SPRSAPS-PSGTTSPANTPSGSKKFPLSNESSSKSNVIILS 160

[Close]

BLAST of Chy6G110920 vs. TAIR 10
Match: AT2G13820.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 71.2 bits (173), Expect = 8.8e-13
Identity = 50/165 (30.30%), Postives = 90/165 (54.55%), Query Frame = 0


Query: 7   VVGLVAVIVAVHWAGAAAQSDCTNVLISMAPCLNYITGNSST--PSQSCCTQLSNVVRSN 66
           ++ + +V+  +    A A  DC++++++MA CL+++T  S+   P  +CC+ L  VVR+ 
Sbjct: 6   ILMIFSVVALMSGERAHAAVDCSSLILNMADCLSFVTSGSTVVKPEGTCCSGLKTVVRTG 65

Query: 67  PQCLCQVLNGGGSSLGVNINQTQALALPQACNVQTPSVSSCNV----DSPAGSPAGAPDS 126
           P+CLC+     G SLG+ ++ ++A +LP  C V  P  + C +    D PA +P  +P +
Sbjct: 66  PECLCEAFKNSG-SLGLTLDLSKAASLPSVCKVAAPPSARCGLSVSGDPPATAPGLSPTA 125

Query: 127 SNNVP--SGTGSKTVPSTDNGSSDGSSIHMSKP-LLFSILLASIY 163
               P  S   +   P +   SSD S + +S   ++F  L++S Y
Sbjct: 126 GAGAPALSSGANAATPVSSPRSSDASLLSVSFAFVIFMALISSFY 169

The following BLAST results are available for this feature:

BLAST of Chy6G110920 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LJ86	3.8e-37	58.75	Non-specific lipid transfer protein GPI-anchored 5 OS=Arabidopsis thaliana OX=37...	[more]
Q2PE59	9.1e-31	53.74	Non-specific lipid transfer protein GPI-anchored 26 OS=Arabidopsis thaliana OX=3...	[more]
Q7EB72	2.2e-24	39.11	Non-specific lipid transfer protein GPI-anchored 15 OS=Arabidopsis thaliana OX=3...	[more]
F4HZB9	1.3e-21	43.48	Non-specific lipid transfer protein GPI-anchored 19 OS=Arabidopsis thaliana OX=3...	[more]
Q9ZQI8	1.2e-11	30.30	Non-specific lipid transfer protein GPI-anchored 11 OS=Arabidopsis thaliana OX=3...	[more]

BLAST of Chy6G110920 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L5G6	3.3e-84	99.41	AAI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G146490 PE=3 SV...	[more]
A0A5D3D0R3	9.0e-82	96.45	Non-specific lipid-transfer protein-like protein OS=Cucumis melo var. makuwa OX=...	[more]
A0A1S3AX08	9.0e-82	96.45	non-specific lipid-transfer protein-like protein At2g13820 OS=Cucumis melo OX=36...	[more]
A0A6J1IEC3	3.4e-73	87.57	non-specific lipid-transfer protein-like protein At2g13820 OS=Cucurbita maxima O...	[more]
A0A6J1F2M0	5.9e-73	87.57	non-specific lipid-transfer protein-like protein At2g13820 OS=Cucurbita moschata...	[more]

BLAST of Chy6G110920 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004134131.1	8.07e-111	99.41	non-specific lipid-transfer protein-like protein At2g13820 [Cucumis sativus] >KG...	[more]
XP_008438652.1	1.28e-107	96.45	PREDICTED: non-specific lipid-transfer protein-like protein At2g13820 [Cucumis m...	[more]
XP_038902233.1	5.16e-98	87.57	non-specific lipid transfer protein GPI-anchored 19 [Benincasa hispida]	[more]
XP_022974389.1	2.45e-96	87.57	non-specific lipid-transfer protein-like protein At2g13820 [Cucurbita maxima] >X...	[more]
XP_022934392.1	4.95e-96	87.57	non-specific lipid-transfer protein-like protein At2g13820 [Cucurbita moschata] ...	[more]

BLAST of Chy6G110920 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G22600.1	2.7e-38	58.75	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT4G14815.1	6.5e-32	53.74	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT2G48130.1	1.5e-25	39.11	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT1G03103.1	9.4e-23	43.48	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT2G13820.1	8.8e-13	30.30	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000528	Plant non-specific lipid-transfer protein/Par allergen	PRINTS	PR00382	LIPIDTRNSFER	coord: 27..43 score: 36.02 coord: 82..99 score: 32.14 coord: 48..62 score: 24.82
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	SMART	SM00499	aai_6	coord: 28..105 e-value: 2.4E-9 score: 47.0
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	PFAM	PF14368	LTP_2	coord: 12..105 e-value: 7.6E-18 score: 64.5
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	GENE3D	1.10.110.10		coord: 25..107 e-value: 1.4E-18 score: 68.5
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	SUPERFAMILY	47699	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	coord: 27..108
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 106..144
None	No IPR available	PANTHER	PTHR33044:SF180	BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN	coord: 6..163
None	No IPR available	CDD	cd00010	AAI_LTSS	coord: 35..97 e-value: 7.27752E-24 score: 86.7118
IPR043325	Alpha-Amylase Inhibitors (AAI), Lipid Transfer (LT) and Seed Storage (SS) Protein	PANTHER	PTHR33044	BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED	coord: 6..163

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy6G110920.1	Chy6G110920.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006869	lipid transport
cellular_component	GO:0031225	anchored component of membrane
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0008289	lipid binding