Chy6G110450 (gene) Cucumber (hystrix) v1

Overview


Name	Chy6G110450
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	DNA-directed RNA polymerase V subunit 7-like
Location	chrH06: 3490862 .. 3493235 (+)
RNA-Seq Expression	Chy6G110450
Synteny	Chy6G110450

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTTTATGAAGTGGAACTAGTGAGAGATGTGGAAATCACAGTGGAAAAGGAAAAGAGAGATGCTCACAACTTCCAGAGGTACATTATAACATGTTTATTAGAAAACTTATTGAAGGAGAAGGCCAACAAAGACCATGGCTATTTACTTTCTGTTACTAGCTTGAAGAGCATAGGCAAGGGAGTGGTTAAGAACGAGTCTCAATGTGTTTCATTCCCCATTACCTTTATTTGCCGAACCTTTTTGCCTTTTGAGGGGGAGATCTTACATGGAGTTGTTCGTCACATATTTCAGCGAGGATTACTCTTAAAATGTGGACCGATCAAGTACGCGTTTCTTTCAGCTCGTAAAATGCCAACCTACCAGTACGTTGGTGGTGAAAATCCTGTATTCTCAAGCAAAGAATTTGCTACAATTGGAAACGATGTCGTTGTACGGTTCAGTGTGCTTGGTGTGAGATGGATAGAGAAAAGAGGATGTATCAAAAAAGAGTTTGTGATGCTTGCTAGCTTAGAAGGTAACAACTCACTTGGACCTATTTCATTGTCGGACTCCGATGAGTTTGACCTGTAAATTTAGAACACAAACCACAAACTTGGGAATGTTTCACTGTAATATATTCTCTTACAGGCCTTGCTTTTTTCTTCCTTCCCTTCTATATCCGTTCGATGTTCTTTTGTCCATGATAATTCAAGATTCTCGTGGAATGTTAATTTAAATGTCTTGCATTAAGGACATTTGAGGTCTGGATGGTTTAAATCTTTAGTTGGAGAATAGATGTTTGCAAAACAGTATTGGACTTTTGAGTTTGTATTGAAGAACAAAAATGAGAGAGGGGGAGAGAAGTTCTGTAGGCTGAAGATGATGGCATATTTCAACCCACTGACACGGATGTCTGTCTTACAAATTACAATCCAATGCATTTCTTGTTTTTCATTGATTCAAATAGTGATGGGTTGTTGTGAATTGTTATCCATCCACCCTATATGTTAAATCTATGTTCAAGTTGGCTAAATATATCATGTTGGCAGTAGAAAAGTGTCATTATTGAATGTTATCCTGGTCCCAATATTTTTTTAGTTTTTTTTTTTTTTTTCCATTATAATTTCATCACAAAAACTACCCTCAACAAGCATCCATAACTTTGAATTAATGAAGTTTGTACTAAACTTTTGGGGAACATTGACTTACATGGTAACTTTGTTAAAATCAAATTGAATAAAAATTCACAATACAAATGAAAGTGAATCAAAGTGAAGTAGAAAATAATAATAAAAAGAGTATTTAAAATTCAGATAAATTCATAAGTATTCTCAATACCACTTCAAAACTCTTGTATACATATTTTGATTTAATTCTTACACTGTTTATCTTTATGAACTTTTCTTTTTCTGGAGAAGATAATGATGAGCTTTTATATCGTATATAATCAATCAAACTCATAGCTTGTAAAGCAAACCTATCGAATTTAAAAAACAAAAAAACAATGATCTTATATCTCATAATCTCAACATATAAAAAGCAACAGAAATATGATTTTTAAGAATACAACATTACAAGAAAGAGTGAAGATTAAATTTAAAAACAAAGTGGTTAACAGTTGAACTTTTCCAGATTGACCGTTGACTGCCCTTTCTTTAGTATACATTTTTTTTTCCCCTTATTTTAAAATTTTAATTTCATATTTATAGAATTCTCATTTAAGATTGAATTGGATCATTCATATAAATCAGTATAAAGTAAGGTGAGGCTCAAGATTAAAGCTTCGGAATTGGGATCTTTCTCTTTTTTGTATTTCTTTCCATTTCGGAGCTCCGGCGAGAATTTTCAGATTTTTATCCCAATGTCTACCGCTGAATTCGCCGTCACTTTCAAGGAAGCCGGTCGATCCGTCATCGCAACTCGCCGTCCATGGCGGGAATTCCTAGACCTATCGGCTCTCAGCCTTCCTTCTTCCCTCTCGGACGCTACGACTCGGATTTCTCATAACTTGACCCGTTTCCTTTCCAATTACTGTCTTGTCGTCTTGCTCCTCATTTTTCTTGGCCTCATTTACCATCCATTTTCCATGATTGTCTTCTTACTCGTCTTTGTTGCCTGGTTCTTTCTTTACTTTTCTCGCGATGACCCAATTAGGGTTTTTGGTTTTGAGTTGGATGATTTGGTTTTGATTATTATTCTTGGATTGGCTACTGGTTTGGCGCTGGCTTTGACTGGGGTTTTTGTGAATGTGCTGATTTCACTTGCAATTGGGGCTGTGGTGGTTTGCTTGCATGGGGCTTTGAGGAGTACTGAGGATCTTGTTGGGGATATGCAAGACCCTTTTGGGGATGCCCTTTTGGAGAGTCCAAGAGGTGATTACAGCGGTATCTGA

mRNA sequence

ATGTTTTATGAAGTGGAACTAGTGAGAGATGTGGAAATCACAGTGGAAAAGGAAAAGAGAGATGCTCACAACTTCCAGAGGTACATTATAACATGTTTATTAGAAAACTTATTGAAGGAGAAGGCCAACAAAGACCATGGCTATTTACTTTCTGTTACTAGCTTGAAGAGCATAGGCAAGGGAGTGGTTAAGAACGAGTCTCAATGTGTTTCATTCCCCATTACCTTTATTTGCCGAACCTTTTTGCCTTTTGAGGGGGAGATCTTACATGGAGTTGTTCGTCACATATTTCAGCGAGGATTACTCTTAAAATGTGGACCGATCAAGTACGCGTTTCTTTCAGCTCGTAAAATGCCAACCTACCAGTACGTTGGTGGTGAAAATCCTGTATTCTCAAGCAAAGAATTTGCTACAATTGGAAACGATGTCGTTGTACGGTTCAGTGTGCTTGGTGTGAGATGGATAGAGAAAAGAGGATGTATCAAAAAAGAGTTTGTGATGCTTGCTAGCTTAGAAGGTAACAACTCACTTGGACCTATTTCATTGTCGGACTCCGATGAGTTTGACCTCTCCGGCGAGAATTTTCAGATTTTTATCCCAATGTCTACCGCTGAATTCGCCGTCACTTTCAAGGAAGCCGGTCGATCCGTCATCGCAACTCGCCGTCCATGGCGGGAATTCCTAGACCTATCGGCTCTCAGCCTTCCTTCTTCCCTCTCGGACGCTACGACTCGGATTTCTCATAACTTGACCCGTTTCCTTTCCAATTACTGTCTTGTCGTCTTGCTCCTCATTTTTCTTGGCCTCATTTACCATCCATTTTCCATGATTGTCTTCTTACTCGTCTTTGTTGCCTGGTTCTTTCTTTACTTTTCTCGCGATGACCCAATTAGGGTTTTTGGTTTTGAGTTGGATGATTTGGTTTTGATTATTATTCTTGGATTGGCTACTGGTTTGGCGCTGGCTTTGACTGGGGTTTTTGTGAATGTGCTGATTTCACTTGCAATTGGGGCTGTGGTGGTTTGCTTGCATGGGGCTTTGAGGAGTACTGAGGATCTTGTTGGGGATATGCAAGACCCTTTTGGGGATGCCCTTTTGGAGAGTCCAAGAGGTGATTACAGCGGTATCTGA

Coding sequence (CDS)

ATGTTTTATGAAGTGGAACTAGTGAGAGATGTGGAAATCACAGTGGAAAAGGAAAAGAGAGATGCTCACAACTTCCAGAGGTACATTATAACATGTTTATTAGAAAACTTATTGAAGGAGAAGGCCAACAAAGACCATGGCTATTTACTTTCTGTTACTAGCTTGAAGAGCATAGGCAAGGGAGTGGTTAAGAACGAGTCTCAATGTGTTTCATTCCCCATTACCTTTATTTGCCGAACCTTTTTGCCTTTTGAGGGGGAGATCTTACATGGAGTTGTTCGTCACATATTTCAGCGAGGATTACTCTTAAAATGTGGACCGATCAAGTACGCGTTTCTTTCAGCTCGTAAAATGCCAACCTACCAGTACGTTGGTGGTGAAAATCCTGTATTCTCAAGCAAAGAATTTGCTACAATTGGAAACGATGTCGTTGTACGGTTCAGTGTGCTTGGTGTGAGATGGATAGAGAAAAGAGGATGTATCAAAAAAGAGTTTGTGATGCTTGCTAGCTTAGAAGGTAACAACTCACTTGGACCTATTTCATTGTCGGACTCCGATGAGTTTGACCTCTCCGGCGAGAATTTTCAGATTTTTATCCCAATGTCTACCGCTGAATTCGCCGTCACTTTCAAGGAAGCCGGTCGATCCGTCATCGCAACTCGCCGTCCATGGCGGGAATTCCTAGACCTATCGGCTCTCAGCCTTCCTTCTTCCCTCTCGGACGCTACGACTCGGATTTCTCATAACTTGACCCGTTTCCTTTCCAATTACTGTCTTGTCGTCTTGCTCCTCATTTTTCTTGGCCTCATTTACCATCCATTTTCCATGATTGTCTTCTTACTCGTCTTTGTTGCCTGGTTCTTTCTTTACTTTTCTCGCGATGACCCAATTAGGGTTTTTGGTTTTGAGTTGGATGATTTGGTTTTGATTATTATTCTTGGATTGGCTACTGGTTTGGCGCTGGCTTTGACTGGGGTTTTTGTGAATGTGCTGATTTCACTTGCAATTGGGGCTGTGGTGGTTTGCTTGCATGGGGCTTTGAGGAGTACTGAGGATCTTGTTGGGGATATGCAAGACCCTTTTGGGGATGCCCTTTTGGAGAGTCCAAGAGGTGATTACAGCGGTATCTGA

Protein sequence

MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKANKDHGYLLSVTSLKSIGKGVVKNESQCVSFPITFICRTFLPFEGEILHGVVRHIFQRGLLLKCGPIKYAFLSARKMPTYQYVGGENPVFSSKEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDEFDLSGENFQIFIPMSTAEFAVTFKEAGRSVIATRRPWREFLDLSALSLPSSLSDATTRISHNLTRFLSNYCLVVLLLIFLGLIYHPFSMIVFLLVFVAWFFLYFSRDDPIRVFGFELDDLVLIIILGLATGLALALTGVFVNVLISLAIGAVVVCLHGALRSTEDLVGDMQDPFGDALLESPRGDYSGI*

Homology

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BLAST of Chy6G110450 vs. ExPASy Swiss-Prot
Match: Q6NML5 (DNA-directed RNA polymerase subunit 7-like protein OS=Arabidopsis thaliana OX=3702 GN=NRPB7L PE=2 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 3.6e-35
Identity = 82/199 (41.21%), Postives = 121/199 (60.80%), Query Frame = 0


Query: 1   MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKANKDHGYLLSVTSLKSIGK 60
           MF EVE+ RDV I    +  +  +  + I+  LL++L+ EKA ++HG+ L +T+LKSIG 
Sbjct: 1   MFSEVEMARDVAICA--KHLNGQSPHQPILCRLLQDLIHEKACREHGFYLGITALKSIGN 60

Query: 61  GVVKN-------ESQCVSFPITFICRTFLPFEGEILHGVVRHIFQRGLLLKCGPIKYAFL 120
               N       +++ ++FP++F CRTFLP  G+IL G V+ +   G  ++ GP++YA+L
Sbjct: 61  NKNNNIDNENNHQAKILTFPVSFTCRTFLPARGDILQGTVKKVLWNGAFIRSGPLRYAYL 120

Query: 121 SARKMPTYQYVGG-----ENPVFSSKEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVML 180
           S  KMP Y YV       E P F   + + I   VVVRF VL VR+ E+    + ++ +L
Sbjct: 121 SLLKMPHYHYVHSPLSEDEKPHFQKDDLSKIAVGVVVRFQVLAVRFKERPHKRRNDYYVL 180

Query: 181 ASLEGNNSLGPISLSDSDE 188
           A+LEGN S GPISL+ SDE
Sbjct: 181 ATLEGNGSFGPISLTGSDE 197

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BLAST of Chy6G110450 vs. ExPASy Swiss-Prot
Match: P93829 (PRA1 family protein D OS=Arabidopsis thaliana OX=3702 GN=PRA1D PE=1 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 1.5e-33
Identity = 80/174 (45.98%), Postives = 120/174 (68.97%), Query Frame = 0


Query: 211 KEAGRSVIATRRPWREFLDLSALSLPSSLSDATTRISHNLTRFLSNYCLVVLLLIFLGLI 270
           KE  +S+    RPW +FLDLSA S PSS++DATTR++ NLT F  NY +++ +L+ L LI
Sbjct: 10  KETAQSITGAARPWGDFLDLSAFSFPSSIADATTRVTQNLTHFRINYSIILSILLGLTLI 69

Query: 271 YHPFSMIVFLLVFVAWFFLYFSRDDPIRVFGFELDD-LVLIIILGLATGLALALTGVFVN 330
             P +++ F+ V +AWFFLYF+R++P+ +FGF +DD +V ++++GL+ G +L  TGV++ 
Sbjct: 70  TRPIAILAFIAVGLAWFFLYFAREEPLTIFGFTIDDGIVAVLLIGLSIG-SLVTTGVWLR 129

Query: 331 VLISLAIGAVVVCLHGALRSTEDLVG-DMQDPFGDALLES------PRGDYSGI 377
            L ++  G +V+ LH ALR T+DLV  D++ P+G  L  S       RGDYSGI
Sbjct: 130 ALTTVGFGVLVLILHAALRGTDDLVSDDLESPYGPMLSTSGGGNDGARGDYSGI 182

[Close]

BLAST of Chy6G110450 vs. ExPASy Swiss-Prot
Match: A6QRA1 (DNA-directed RNA polymerase V subunit 7 OS=Arabidopsis thaliana OX=3702 GN=NRPE7 PE=1 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 2.2e-32
Identity = 73/181 (40.33%), Postives = 114/181 (62.98%), Query Frame = 0


Query: 1   MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKANKDHGYLLSVTSLKSIGK 60
           MF +V+L  +V I  E         +R I+  LLE    +KA K+ GY ++VT+L  IG+
Sbjct: 1   MFLKVQLPWNVMIPAENMDAKGLMLKRAILVELLEAFASKKATKELGYYVAVTTLDKIGE 60

Query: 61  GVVKNESQCVSFPITFICRTFLPFEGEILHGVVRHIFQRGLLLKCGPIKYAFLSARKMPT 120
           G ++  +  V FP+ F   TF  F+GEI+HGVV  + + G+ ++CGPI+  +LS  KMP 
Sbjct: 61  GKIREHTGEVLFPVMFSGMTFKIFKGEIIHGVVHKVLKHGVFMRCGPIENVYLSYTKMPD 120

Query: 121 YQYVGGENPVFSSKEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPI 180
           Y+Y+ GENP+F +++ + I  +  VR  V+G++W+E    +++EF  LASLEG + LGP+
Sbjct: 121 YKYIPGENPIFMNEKTSRIQVETTVRVVVIGIKWME----VEREFQALASLEG-DYLGPL 176

Query: 181 S 182
           S
Sbjct: 181 S 176

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BLAST of Chy6G110450 vs. ExPASy Swiss-Prot
Match: Q9FRR1 (PRA1 family protein E OS=Arabidopsis thaliana OX=3702 GN=PRA1E PE=1 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 2.2e-32
Identity = 80/164 (48.78%), Postives = 108/164 (65.85%), Query Frame = 0


Query: 211 KEAGRSVIATRRPWREFLDLSALSLPSSLSDATTRISHNLTRFLSNYCLVVLLLIFLGLI 270
           K+  +S+I T RPWRE LDLSALSLP    +A   + HN++ F  NY L VL ++FLGLI
Sbjct: 37  KQTTQSMITTLRPWREILDLSALSLPRGYDEAMAHLKHNISYFRGNYALAVLAIVFLGLI 96

Query: 271 YHPFSMIVFLLVFVAWFFLYFSRD--DPIRVFGFELDDLVLIIILGLATGLALALTGVFV 330
           YHP SMI F++VF+ W  LYFSRD  D I + G E+DD +++++L L T LAL  T V  
Sbjct: 97  YHPMSMIAFIVVFIGWILLYFSRDANDSIVISGKEVDDKIVLVLLSLVTVLALVYTDVGE 156

Query: 331 NVLISLAIGAVVVCLHGALRSTEDLVGDMQDPFGDALLESPRGD 373
           NVL+SL IG ++V  HGA R+T+DL  D +      L+ +  G+
Sbjct: 157 NVLVSLIIGLLIVGAHGAFRNTDDLFLDEESARRGGLVSAGSGN 200

[Close]

BLAST of Chy6G110450 vs. ExPASy Swiss-Prot
Match: Q9LIC6 (PRA1 family protein F3 OS=Arabidopsis thaliana OX=3702 GN=PRA1F3 PE=1 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 1.4e-26
Identity = 69/157 (43.95%), Postives = 99/157 (63.06%), Query Frame = 0


Query: 200 PMSTAEFAVTFKEAGRSVIATRRPWREFLDLSALSLPSSLSDATTRISHNLTRFLSNYCL 259
           P+   E     K   ++ +ATRR WR   D  ++ LP  +SDA TRI  NL  F  NY +
Sbjct: 15  PLVDVESLSRAKHRIKAGLATRRAWRVMFDFHSMGLPHGVSDAFTRIKTNLAYFRMNYAI 74

Query: 260 VVLLLIFLGLIYHPFSMIVFLLVFVAWFFLYFSRDDPIRVFGFELDDLVLIIILGLATGL 319
           VVL++IF  LI+HP S+IVF ++ V W FLYF RD+PI++F F++DD  ++I+L + T +
Sbjct: 75  VVLIVIFFSLIWHPTSLIVFTVLVVVWIFLYFLRDEPIKLFRFQIDDRTVLIVLSVLTVV 134

Query: 320 ALALTGVFVNVLISLAIGAVVVCLHGALRSTEDLVGD 357
            L LT    N++ +L  GAV+V +H  +R TEDL  D
Sbjct: 135 LLLLTNATFNIVGALVTGAVLVLIHSVVRKTEDLFLD 171

[Close]

BLAST of Chy6G110450 vs. ExPASy TrEMBL
Match: A0A1S3AWE2 (DNA-directed RNA polymerase V subunit 7-like OS=Cucumis melo OX=3656 GN=LOC103483648 PE=4 SV=1)

HSP 1 Score: 384.8 bits (987), Expect = 4.1e-103
Identity = 189/190 (99.47%), Postives = 189/190 (99.47%), Query Frame = 0


Query: 1   MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKANKDHGYLLSVTSLKSIGK 60
           MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKANKDHGY LSVTSLKSIGK
Sbjct: 1   MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKANKDHGYFLSVTSLKSIGK 60

Query: 61  GVVKNESQCVSFPITFICRTFLPFEGEILHGVVRHIFQRGLLLKCGPIKYAFLSARKMPT 120
           GVVKNESQCVSFPITFICRTFLPFEGEILHGVVRHIFQRGLLLKCGPIKYAFLSARKMPT
Sbjct: 61  GVVKNESQCVSFPITFICRTFLPFEGEILHGVVRHIFQRGLLLKCGPIKYAFLSARKMPT 120

Query: 121 YQYVGGENPVFSSKEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPI 180
           YQYVGGENPVFSSKEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPI
Sbjct: 121 YQYVGGENPVFSSKEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPI 180

Query: 181 SLSDSDEFDL 191
           SLSDSDEFDL
Sbjct: 181 SLSDSDEFDL 190

[Close]

BLAST of Chy6G110450 vs. ExPASy TrEMBL
Match: A0A5A7U0C3 (DNA-directed RNA polymerase V subunit 7-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G001070 PE=4 SV=1)

HSP 1 Score: 384.8 bits (987), Expect = 4.1e-103
Identity = 189/190 (99.47%), Postives = 189/190 (99.47%), Query Frame = 0


Query: 1   MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKANKDHGYLLSVTSLKSIGK 60
           MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKANKDHGY LSVTSLKSIGK
Sbjct: 1   MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKANKDHGYFLSVTSLKSIGK 60

Query: 61  GVVKNESQCVSFPITFICRTFLPFEGEILHGVVRHIFQRGLLLKCGPIKYAFLSARKMPT 120
           GVVKNESQCVSFPITFICRTFLPFEGEILHGVVRHIFQRGLLLKCGPIKYAFLSARKMPT
Sbjct: 61  GVVKNESQCVSFPITFICRTFLPFEGEILHGVVRHIFQRGLLLKCGPIKYAFLSARKMPT 120

Query: 121 YQYVGGENPVFSSKEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPI 180
           YQYVGGENPVFSSKEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPI
Sbjct: 121 YQYVGGENPVFSSKEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPI 180

Query: 181 SLSDSDEFDL 191
           SLSDSDEFDL
Sbjct: 181 SLSDSDEFDL 190

[Close]

BLAST of Chy6G110450 vs. ExPASy TrEMBL
Match: A0A0A0L5A3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G143540 PE=4 SV=1)

HSP 1 Score: 381.7 bits (979), Expect = 3.5e-102
Identity = 186/190 (97.89%), Postives = 188/190 (98.95%), Query Frame = 0


Query: 1   MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKANKDHGYLLSVTSLKSIGK 60
           MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKANKDHGY LSVTSL+SIGK
Sbjct: 1   MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKANKDHGYFLSVTSLRSIGK 60

Query: 61  GVVKNESQCVSFPITFICRTFLPFEGEILHGVVRHIFQRGLLLKCGPIKYAFLSARKMPT 120
           G+VKNESQCVSFPITFICRTFLPFEGEILHGVVRHIFQRGLLLKCGPIKY FLSARKMPT
Sbjct: 61  GIVKNESQCVSFPITFICRTFLPFEGEILHGVVRHIFQRGLLLKCGPIKYVFLSARKMPT 120

Query: 121 YQYVGGENPVFSSKEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPI 180
           YQYVGGENPVFSSKEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPI
Sbjct: 121 YQYVGGENPVFSSKEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPI 180

Query: 181 SLSDSDEFDL 191
           SLSDSDEFDL
Sbjct: 181 SLSDSDEFDL 190

[Close]

BLAST of Chy6G110450 vs. ExPASy TrEMBL
Match: A0A6J1EFY9 (DNA-directed RNA polymerase V subunit 7-like OS=Cucurbita moschata OX=3662 GN=LOC111432163 PE=4 SV=1)

HSP 1 Score: 340.9 bits (873), Expect = 6.8e-90
Identity = 170/192 (88.54%), Postives = 176/192 (91.67%), Query Frame = 0


Query: 1   MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKANKDHGYLLSVTSLKSIGK 60
           MF EVELVRDVE+TVEKEKRD  N QRYIITCLLENLLKEKA+KDHGY L+VTSLKSIGK
Sbjct: 1   MFCEVELVRDVEVTVEKEKRDGVNLQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGK 60

Query: 61  GVVKN--ESQCVSFPITFICRTFLPFEGEILHGVVRHIFQRGLLLKCGPIKYAFLSARKM 120
           G VKN  ESQCVSFPITF CRTFLP EGEILHGVVRHIF+RGLLLKCGPIKY FLSARKM
Sbjct: 61  GEVKNESESQCVSFPITFSCRTFLPLEGEILHGVVRHIFRRGLLLKCGPIKYVFLSARKM 120

Query: 121 PTYQYVGGENPVFSSKEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLG 180
           PTY YVGGENPVFSS + ATIGNDVVVRFSVLGVRW+EKRGCIKKEFVMLASLEGN SLG
Sbjct: 121 PTYHYVGGENPVFSSTQSATIGNDVVVRFSVLGVRWLEKRGCIKKEFVMLASLEGNTSLG 180

Query: 181 PISLSDSDEFDL 191
           PIS SDSDEFDL
Sbjct: 181 PISSSDSDEFDL 192

[Close]

BLAST of Chy6G110450 vs. ExPASy TrEMBL
Match: A0A6J1IQI7 (DNA-directed RNA polymerase V subunit 7-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111479602 PE=4 SV=1)

HSP 1 Score: 336.3 bits (861), Expect = 1.7e-88
Identity = 168/192 (87.50%), Postives = 175/192 (91.15%), Query Frame = 0


Query: 1   MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKANKDHGYLLSVTSLKSIGK 60
           MF EVELVR+VE+TVEKEKRD  N QRYIITCLLENLLKEKA+KDHGY L+VTSLKSIGK
Sbjct: 1   MFCEVELVRNVEVTVEKEKRDGVNLQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGK 60

Query: 61  GVVKN--ESQCVSFPITFICRTFLPFEGEILHGVVRHIFQRGLLLKCGPIKYAFLSARKM 120
             VKN  ESQCVSFPITF CRTFLP EGEILHGVVRHIF+RGLLLKCGPIKY FLSARKM
Sbjct: 61  EEVKNESESQCVSFPITFSCRTFLPLEGEILHGVVRHIFRRGLLLKCGPIKYVFLSARKM 120

Query: 121 PTYQYVGGENPVFSSKEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLG 180
           PTY YVGGENPVFSS + ATIGNDVVVRFSVLGVRW+EKRGCI KEFVMLASLEGN SLG
Sbjct: 121 PTYHYVGGENPVFSSTQSATIGNDVVVRFSVLGVRWLEKRGCINKEFVMLASLEGNTSLG 180

Query: 181 PISLSDSDEFDL 191
           PISLSDSDEFDL
Sbjct: 181 PISLSDSDEFDL 192

[Close]

BLAST of Chy6G110450 vs. NCBI nr
Match: KAG7018763.1 (DNA-directed RNA polymerase subunit 7-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 606 bits (1562), Expect = 1.60e-214
Identity = 320/404 (79.21%), Postives = 343/404 (84.90%), Query Frame = 0


Query: 1   MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKANKDHGYLLSVTSLKSIGK 60
           MF EVELVRDVE+TVEKEKRD  N QRYIITCLLENLLKEKA+KDHGY L+VTSLKSIGK
Sbjct: 76  MFCEVELVRDVEVTVEKEKRDGVNLQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGK 135

Query: 61  GVVKNES--QCVSFPITFICRTFLPFEGEILHGVVRHIFQRGLLLKCGPIKYAFLSARKM 120
           G VKNES  QCVSFPITF CRTFLP EGEILHGVVRHIF+RGLLLKCGPIKY FLSARKM
Sbjct: 136 GEVKNESESQCVSFPITFRCRTFLPLEGEILHGVVRHIFRRGLLLKCGPIKYVFLSARKM 195

Query: 121 PTYQYVGGENPVFSSKEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLG 180
           PTY YVGGENPVFSS + ATIGNDVVVRFSVLGVRW+EKRGCIKKEFVMLASLEGN SLG
Sbjct: 196 PTYHYVGGENPVFSSTQSATIGNDVVVRFSVLGVRWLEKRGCIKKEFVMLASLEGNTSLG 255

Query: 181 PISLSDSDEFDLS--------------------------GENFQIFIPMSTAEFAVTFKE 240
           PIS SDSDEFDL                            ++FQ  +PMS AEFAVTFKE
Sbjct: 256 PISSSDSDEFDLEEGGSRGIFRFFAFLFFLTSLPFIGAPAKSFQGSMPMSAAEFAVTFKE 315

Query: 241 AGRSVIATRRPWREFLDLSALSLPSSLSDATTRISHNLTRFLSNYCLVVLLLIFLGLIYH 300
           AGRSVIATR PWREFLD S LSLPSSLS+ATTR+S NLTRFLSNYCL++LLL+ LGLIYH
Sbjct: 316 AGRSVIATRSPWREFLDPSVLSLPSSLSNATTRMSQNLTRFLSNYCLLLLLLVLLGLIYH 375

Query: 301 PFSMIVFLLVFVAWFFLYFSRDDPIRVFGFELDDLVLIIILGLATGLALALTGVFVNVLI 360
           PFSMIV  LVF AWFFLYFSR+DP+RVFGF+LDDLVL+IILGL TGLALA  GVFVNVLI
Sbjct: 376 PFSMIVLFLVFAAWFFLYFSRNDPLRVFGFDLDDLVLVIILGLTTGLALA--GVFVNVLI 435

Query: 361 SLAIGAVVVCLHGALRSTEDLVGDMQDPFGDALLESPRGDYSGI 376
           SL IGAVVVCLH ALR+TED++GD+QDPFGDALL+SPRGDYSG 
Sbjct: 436 SLVIGAVVVCLHAALRATEDILGDLQDPFGDALLDSPRGDYSGF 477

[Close]

BLAST of Chy6G110450 vs. NCBI nr
Match: KAG7028853.1 (DNA-directed RNA polymerase V subunit 7, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 590 bits (1522), Expect = 7.24e-210
Identity = 307/386 (79.53%), Postives = 336/386 (87.05%), Query Frame = 0


Query: 1   MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKANKDHGYLLSVTSLKSIGK 60
           MF EVELVRDV++  EK  RD  NFQRYI+  LLENLLKE+A+KDHGY ++VTSLKSIGK
Sbjct: 1   MFCEVELVRDVKVVAEKADRDGLNFQRYIMARLLENLLKERASKDHGYFIAVTSLKSIGK 60

Query: 61  GVVKNESQCVSFPITFICRTFLPFEGEILHGVVRHIFQRGLLLKCGPIKYAFLSARKMPT 120
           G  KN+SQ V+FPITF CRTF+P  GEIL GVVRH+F+RGLLLKCGPI Y FLS+RKMPT
Sbjct: 61  GQCKNKSQYVTFPITFGCRTFVPSGGEILLGVVRHVFRRGLLLKCGPINYVFLSSRKMPT 120

Query: 121 YQYVGGENPVFSSKEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPI 180
           Y YVGG+NPVFSS EFATI  +  VRF+VLGVRWIEKRGCIKKEFVMLASLEG+N+LGPI
Sbjct: 121 YHYVGGKNPVFSSNEFATIRTESAVRFNVLGVRWIEKRGCIKKEFVMLASLEGSNTLGPI 180

Query: 181 SLSDSDEFD----------LSGENFQIFIPMSTAEFAVTFKEAGRSVIATRRPWREFLDL 240
           SLS++D+             SG+NFQ FIPMSTAEFAVTFKEAGRSVIATRRPWREFLD 
Sbjct: 181 SLSEADDLGSSTLDSHYQPCSGQNFQAFIPMSTAEFAVTFKEAGRSVIATRRPWREFLDP 240

Query: 241 SALSLPSSLSDATTRISHNLTRFLSNYCLVVLLLIFLGLIYHPFSMIVFLLVFVAWFFLY 300
            +LSLPSSLSDAT+RIS NLTRFLSNYCLVVLLLIFLGLIYHPFSMIVF LVFVAWF LY
Sbjct: 241 LSLSLPSSLSDATSRISQNLTRFLSNYCLVVLLLIFLGLIYHPFSMIVFFLVFVAWFVLY 300

Query: 301 FSRDDPIRVFGFELDDLVLIIILGLATGLALALTGVFVNVLISLAIGAVVVCLHGALRST 360
           FSRDDPIRVFGFEL D VL+IILGLATGLALALTGVFVNVLISLAIGA+VVCLH AL+ T
Sbjct: 301 FSRDDPIRVFGFELGDFVLVIILGLATGLALALTGVFVNVLISLAIGAMVVCLHAALKGT 360

Query: 361 EDLVGDMQDPFGDALLESPRGDYSGI 376
           ED +GD+QDPFGD LLESPRGDYSGI
Sbjct: 361 EDALGDLQDPFGDTLLESPRGDYSGI 386

[Close]

BLAST of Chy6G110450 vs. NCBI nr
Match: XP_008438585.1 (PREDICTED: DNA-directed RNA polymerase V subunit 7-like [Cucumis melo] >XP_008438586.1 PREDICTED: DNA-directed RNA polymerase V subunit 7-like [Cucumis melo] >KAA0049303.1 DNA-directed RNA polymerase V subunit 7-like [Cucumis melo var. makuwa] >TYK17255.1 DNA-directed RNA polymerase V subunit 7-like [Cucumis melo var. makuwa])

HSP 1 Score: 384 bits (987), Expect = 1.48e-131
Identity = 189/190 (99.47%), Postives = 189/190 (99.47%), Query Frame = 0


Query: 1   MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKANKDHGYLLSVTSLKSIGK 60
           MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKANKDHGY LSVTSLKSIGK
Sbjct: 1   MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKANKDHGYFLSVTSLKSIGK 60

Query: 61  GVVKNESQCVSFPITFICRTFLPFEGEILHGVVRHIFQRGLLLKCGPIKYAFLSARKMPT 120
           GVVKNESQCVSFPITFICRTFLPFEGEILHGVVRHIFQRGLLLKCGPIKYAFLSARKMPT
Sbjct: 61  GVVKNESQCVSFPITFICRTFLPFEGEILHGVVRHIFQRGLLLKCGPIKYAFLSARKMPT 120

Query: 121 YQYVGGENPVFSSKEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPI 180
           YQYVGGENPVFSSKEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPI
Sbjct: 121 YQYVGGENPVFSSKEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPI 180

Query: 181 SLSDSDEFDL 190
           SLSDSDEFDL
Sbjct: 181 SLSDSDEFDL 190

[Close]

BLAST of Chy6G110450 vs. NCBI nr
Match: XP_004134101.1 (DNA-directed RNA polymerase V subunit 7 [Cucumis sativus] >XP_004134102.1 DNA-directed RNA polymerase V subunit 7 [Cucumis sativus] >KGN56913.1 hypothetical protein Csa_009882 [Cucumis sativus])

HSP 1 Score: 381 bits (979), Expect = 2.44e-130
Identity = 186/190 (97.89%), Postives = 188/190 (98.95%), Query Frame = 0


Query: 1   MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKANKDHGYLLSVTSLKSIGK 60
           MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKANKDHGY LSVTSL+SIGK
Sbjct: 1   MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKANKDHGYFLSVTSLRSIGK 60

Query: 61  GVVKNESQCVSFPITFICRTFLPFEGEILHGVVRHIFQRGLLLKCGPIKYAFLSARKMPT 120
           G+VKNESQCVSFPITFICRTFLPFEGEILHGVVRHIFQRGLLLKCGPIKY FLSARKMPT
Sbjct: 61  GIVKNESQCVSFPITFICRTFLPFEGEILHGVVRHIFQRGLLLKCGPIKYVFLSARKMPT 120

Query: 121 YQYVGGENPVFSSKEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPI 180
           YQYVGGENPVFSSKEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPI
Sbjct: 121 YQYVGGENPVFSSKEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPI 180

Query: 181 SLSDSDEFDL 190
           SLSDSDEFDL
Sbjct: 181 SLSDSDEFDL 190

[Close]

BLAST of Chy6G110450 vs. NCBI nr
Match: XP_038877103.1 (DNA-directed RNA polymerase V subunit 7-like isoform X2 [Benincasa hispida])

HSP 1 Score: 357 bits (916), Expect = 3.26e-120
Identity = 175/190 (92.11%), Postives = 180/190 (94.74%), Query Frame = 0


Query: 1   MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKANKDHGYLLSVTSLKSIGK 60
           MFYEVELV+DVEIT EKEKRDA NFQRYIITCLLENLLKEKANKDHGY L+VTSLKSIGK
Sbjct: 37  MFYEVELVKDVEITAEKEKRDALNFQRYIITCLLENLLKEKANKDHGYFLAVTSLKSIGK 96

Query: 61  GVVKNESQCVSFPITFICRTFLPFEGEILHGVVRHIFQRGLLLKCGPIKYAFLSARKMPT 120
           GVV ++SQCVSFPITF CRTFLPFEGEILHGVV HIF+RGLLLKCGPIKY FLSA KMPT
Sbjct: 97  GVVNSQSQCVSFPITFSCRTFLPFEGEILHGVVHHIFRRGLLLKCGPIKYVFLSACKMPT 156

Query: 121 YQYVGGENPVFSSKEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPI 180
           Y YVGGENPVFSS EFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPI
Sbjct: 157 YHYVGGENPVFSSNEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPI 216

Query: 181 SLSDSDEFDL 190
           SLSDSDEFDL
Sbjct: 217 SLSDSDEFDL 226

[Close]

BLAST of Chy6G110450 vs. TAIR 10
Match: AT4G14520.1 (DNA-directed RNA polymerase II-related )

HSP 1 Score: 150.6 bits (379), Expect = 2.5e-36
Identity = 82/199 (41.21%), Postives = 121/199 (60.80%), Query Frame = 0


Query: 1   MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKANKDHGYLLSVTSLKSIGK 60
           MF EVE+ RDV I    +  +  +  + I+  LL++L+ EKA ++HG+ L +T+LKSIG 
Sbjct: 1   MFSEVEMARDVAICA--KHLNGQSPHQPILCRLLQDLIHEKACREHGFYLGITALKSIGN 60

Query: 61  GVVKN-------ESQCVSFPITFICRTFLPFEGEILHGVVRHIFQRGLLLKCGPIKYAFL 120
               N       +++ ++FP++F CRTFLP  G+IL G V+ +   G  ++ GP++YA+L
Sbjct: 61  NKNNNIDNENNHQAKILTFPVSFTCRTFLPARGDILQGTVKKVLWNGAFIRSGPLRYAYL 120

Query: 121 SARKMPTYQYVGG-----ENPVFSSKEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVML 180
           S  KMP Y YV       E P F   + + I   VVVRF VL VR+ E+    + ++ +L
Sbjct: 121 SLLKMPHYHYVHSPLSEDEKPHFQKDDLSKIAVGVVVRFQVLAVRFKERPHKRRNDYYVL 180

Query: 181 ASLEGNNSLGPISLSDSDE 188
           A+LEGN S GPISL+ SDE
Sbjct: 181 ATLEGNGSFGPISLTGSDE 197

[Close]

BLAST of Chy6G110450 vs. TAIR 10
Match: AT4G14520.2 (DNA-directed RNA polymerase II-related )

HSP 1 Score: 150.6 bits (379), Expect = 2.5e-36
Identity = 82/199 (41.21%), Postives = 121/199 (60.80%), Query Frame = 0


Query: 1   MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKANKDHGYLLSVTSLKSIGK 60
           MF EVE+ RDV I    +  +  +  + I+  LL++L+ EKA ++HG+ L +T+LKSIG 
Sbjct: 1   MFSEVEMARDVAICA--KHLNGQSPHQPILCRLLQDLIHEKACREHGFYLGITALKSIGN 60

Query: 61  GVVKN-------ESQCVSFPITFICRTFLPFEGEILHGVVRHIFQRGLLLKCGPIKYAFL 120
               N       +++ ++FP++F CRTFLP  G+IL G V+ +   G  ++ GP++YA+L
Sbjct: 61  NKNNNIDNENNHQAKILTFPVSFTCRTFLPARGDILQGTVKKVLWNGAFIRSGPLRYAYL 120

Query: 121 SARKMPTYQYVGG-----ENPVFSSKEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVML 180
           S  KMP Y YV       E P F   + + I   VVVRF VL VR+ E+    + ++ +L
Sbjct: 121 SLLKMPHYHYVHSPLSEDEKPHFQKDDLSKIAVGVVVRFQVLAVRFKERPHKRRNDYYVL 180

Query: 181 ASLEGNNSLGPISLSDSDE 188
           A+LEGN S GPISL+ SDE
Sbjct: 181 ATLEGNGSFGPISLTGSDE 197

[Close]

BLAST of Chy6G110450 vs. TAIR 10
Match: AT4G14520.3 (DNA-directed RNA polymerase II-related )

HSP 1 Score: 150.6 bits (379), Expect = 2.5e-36
Identity = 82/199 (41.21%), Postives = 121/199 (60.80%), Query Frame = 0


Query: 1   MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKANKDHGYLLSVTSLKSIGK 60
           MF EVE+ RDV I    +  +  +  + I+  LL++L+ EKA ++HG+ L +T+LKSIG 
Sbjct: 1   MFSEVEMARDVAICA--KHLNGQSPHQPILCRLLQDLIHEKACREHGFYLGITALKSIGN 60

Query: 61  GVVKN-------ESQCVSFPITFICRTFLPFEGEILHGVVRHIFQRGLLLKCGPIKYAFL 120
               N       +++ ++FP++F CRTFLP  G+IL G V+ +   G  ++ GP++YA+L
Sbjct: 61  NKNNNIDNENNHQAKILTFPVSFTCRTFLPARGDILQGTVKKVLWNGAFIRSGPLRYAYL 120

Query: 121 SARKMPTYQYVGG-----ENPVFSSKEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVML 180
           S  KMP Y YV       E P F   + + I   VVVRF VL VR+ E+    + ++ +L
Sbjct: 121 SLLKMPHYHYVHSPLSEDEKPHFQKDDLSKIAVGVVVRFQVLAVRFKERPHKRRNDYYVL 180

Query: 181 ASLEGNNSLGPISLSDSDE 188
           A+LEGN S GPISL+ SDE
Sbjct: 181 ATLEGNGSFGPISLTGSDE 197

[Close]

BLAST of Chy6G110450 vs. TAIR 10
Match: AT1G04260.1 (CAMV movement protein interacting protein 7 )

HSP 1 Score: 145.2 bits (365), Expect = 1.1e-34
Identity = 80/174 (45.98%), Postives = 120/174 (68.97%), Query Frame = 0


Query: 211 KEAGRSVIATRRPWREFLDLSALSLPSSLSDATTRISHNLTRFLSNYCLVVLLLIFLGLI 270
           KE  +S+    RPW +FLDLSA S PSS++DATTR++ NLT F  NY +++ +L+ L LI
Sbjct: 10  KETAQSITGAARPWGDFLDLSAFSFPSSIADATTRVTQNLTHFRINYSIILSILLGLTLI 69

Query: 271 YHPFSMIVFLLVFVAWFFLYFSRDDPIRVFGFELDD-LVLIIILGLATGLALALTGVFVN 330
             P +++ F+ V +AWFFLYF+R++P+ +FGF +DD +V ++++GL+ G +L  TGV++ 
Sbjct: 70  TRPIAILAFIAVGLAWFFLYFAREEPLTIFGFTIDDGIVAVLLIGLSIG-SLVTTGVWLR 129

Query: 331 VLISLAIGAVVVCLHGALRSTEDLVG-DMQDPFGDALLES------PRGDYSGI 377
            L ++  G +V+ LH ALR T+DLV  D++ P+G  L  S       RGDYSGI
Sbjct: 130 ALTTVGFGVLVLILHAALRGTDDLVSDDLESPYGPMLSTSGGGNDGARGDYSGI 182

[Close]

BLAST of Chy6G110450 vs. TAIR 10
Match: AT1G08770.1 (prenylated RAB acceptor 1.E )

HSP 1 Score: 141.4 bits (355), Expect = 1.5e-33
Identity = 80/164 (48.78%), Postives = 108/164 (65.85%), Query Frame = 0


Query: 211 KEAGRSVIATRRPWREFLDLSALSLPSSLSDATTRISHNLTRFLSNYCLVVLLLIFLGLI 270
           K+  +S+I T RPWRE LDLSALSLP    +A   + HN++ F  NY L VL ++FLGLI
Sbjct: 37  KQTTQSMITTLRPWREILDLSALSLPRGYDEAMAHLKHNISYFRGNYALAVLAIVFLGLI 96

Query: 271 YHPFSMIVFLLVFVAWFFLYFSRD--DPIRVFGFELDDLVLIIILGLATGLALALTGVFV 330
           YHP SMI F++VF+ W  LYFSRD  D I + G E+DD +++++L L T LAL  T V  
Sbjct: 97  YHPMSMIAFIVVFIGWILLYFSRDANDSIVISGKEVDDKIVLVLLSLVTVLALVYTDVGE 156

Query: 331 NVLISLAIGAVVVCLHGALRSTEDLVGDMQDPFGDALLESPRGD 373
           NVL+SL IG ++V  HGA R+T+DL  D +      L+ +  G+
Sbjct: 157 NVLVSLIIGLLIVGAHGAFRNTDDLFLDEESARRGGLVSAGSGN 200

The following BLAST results are available for this feature:

BLAST of Chy6G110450 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6NML5	3.6e-35	41.21	DNA-directed RNA polymerase subunit 7-like protein OS=Arabidopsis thaliana OX=37...	[more]
P93829	1.5e-33	45.98	PRA1 family protein D OS=Arabidopsis thaliana OX=3702 GN=PRA1D PE=1 SV=1	[more]
A6QRA1	2.2e-32	40.33	DNA-directed RNA polymerase V subunit 7 OS=Arabidopsis thaliana OX=3702 GN=NRPE7...	[more]
Q9FRR1	2.2e-32	48.78	PRA1 family protein E OS=Arabidopsis thaliana OX=3702 GN=PRA1E PE=1 SV=1	[more]
Q9LIC6	1.4e-26	43.95	PRA1 family protein F3 OS=Arabidopsis thaliana OX=3702 GN=PRA1F3 PE=1 SV=1	[more]

BLAST of Chy6G110450 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3AWE2	4.1e-103	99.47	DNA-directed RNA polymerase V subunit 7-like OS=Cucumis melo OX=3656 GN=LOC10348...	[more]
A0A5A7U0C3	4.1e-103	99.47	DNA-directed RNA polymerase V subunit 7-like OS=Cucumis melo var. makuwa OX=1194...	[more]
A0A0A0L5A3	3.5e-102	97.89	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G143540 PE=4 SV=1	[more]
A0A6J1EFY9	6.8e-90	88.54	DNA-directed RNA polymerase V subunit 7-like OS=Cucurbita moschata OX=3662 GN=LO...	[more]
A0A6J1IQI7	1.7e-88	87.50	DNA-directed RNA polymerase V subunit 7-like isoform X1 OS=Cucurbita maxima OX=3...	[more]

BLAST of Chy6G110450 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7018763.1	1.60e-214	79.21	DNA-directed RNA polymerase subunit 7-like protein, partial [Cucurbita argyrospe...	[more]
KAG7028853.1	7.24e-210	79.53	DNA-directed RNA polymerase V subunit 7, partial [Cucurbita argyrosperma subsp. ...	[more]
XP_008438585.1	1.48e-131	99.47	PREDICTED: DNA-directed RNA polymerase V subunit 7-like [Cucumis melo] >XP_00843...	[more]
XP_004134101.1	2.44e-130	97.89	DNA-directed RNA polymerase V subunit 7 [Cucumis sativus] >XP_004134102.1 DNA-di...	[more]
XP_038877103.1	3.26e-120	92.11	DNA-directed RNA polymerase V subunit 7-like isoform X2 [Benincasa hispida]	[more]

BLAST of Chy6G110450 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G14520.1	2.5e-36	41.21	DNA-directed RNA polymerase II-related	[more]
AT4G14520.2	2.5e-36	41.21	DNA-directed RNA polymerase II-related	[more]
AT4G14520.3	2.5e-36	41.21	DNA-directed RNA polymerase II-related	[more]
AT1G04260.1	1.1e-34	45.98	CAMV movement protein interacting protein 7	[more]
AT1G08770.1	1.5e-33	48.78	prenylated RAB acceptor 1.E	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004895	Prenylated rab acceptor PRA1	PFAM	PF03208	PRA1	coord: 218..355 e-value: 4.3E-42 score: 143.1
None	No IPR available	GENE3D	2.40.50.140		coord: 85..179 e-value: 2.1E-12 score: 48.7
None	No IPR available	PANTHER	PTHR12709:SF6	DNA-DIRECTED RNA POLYMERASE SUBUNIT 7-LIKE PROTEIN	coord: 1..190
IPR036898	RNA polymerase Rpb7-like, N-terminal domain superfamily	GENE3D	3.30.1490.120		coord: 1..84 e-value: 1.6E-11 score: 46.3
IPR036898	RNA polymerase Rpb7-like, N-terminal domain superfamily	SUPERFAMILY	88798	N-terminal, heterodimerisation domain of RBP7 (RpoE)	coord: 1..77
IPR045113	RNA polymerase Rpb7-like	PANTHER	PTHR12709	DNA-DIRECTED RNA POLYMERASE II, III	coord: 1..190
IPR012340	Nucleic acid-binding, OB-fold	SUPERFAMILY	50249	Nucleic acid-binding proteins	coord: 83..155

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy6G110450.1	Chy6G110450.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0070192	chromosome organization involved in meiotic cell cycle
biological_process	GO:0000730	DNA recombinase assembly
biological_process	GO:0006352	DNA-templated transcription, initiation
biological_process	GO:0006312	mitotic recombination
biological_process	GO:0007131	reciprocal meiotic recombination
biological_process	GO:0042148	strand invasion
biological_process	GO:0016192	vesicle-mediated transport
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0000794	condensed nuclear chromosome
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0008094	ATP-dependent activity, acting on DNA
molecular_function	GO:0003899	DNA-directed 5'-3' RNA polymerase activity
molecular_function	GO:0000150	DNA strand exchange activity
molecular_function	GO:0003690	double-stranded DNA binding
molecular_function	GO:0003697	single-stranded DNA binding
molecular_function	GO:0003727	single-stranded RNA binding