Chy6G110100 (gene) Cucumber (hystrix) v1

Overview


Name	Chy6G110100
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	RING-type domain-containing protein
Location	chrH06: 3233769 .. 3234737 (+)
RNA-Seq Expression	Chy6G110100
Synteny	Chy6G110100

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTTCTTCTCCAAAATCAAAACTTCCCAACATATTCCCCCTTTCCCACCTCCAAATCCTTCCCATTCCAGCTTCCCCATTATCGCCATTGCCATTATTGGAATTCTCGTCACTGCTTTTTTGCTTCTCAGCTACTATGTCTTCGTCATCAACTGTTGCCTCAACTGGCACCGCTTCGATCTCATTCGCCGCCTCTCCCCCTCCTCCACCCGCCCTCTCCCCTCCCCCACTGCCTACTCTCCGGCCCTCGAGACTCGGGGTCTTGACGAATCGGTGATTAGATCAATCCCTTTACTGCATTACAACAAATCAATGGCCAACCAAAAAACCTCATCTGAATGCGCTGTTTGTTTGAGTGAATTTCAAGAAGATGAGACTGTTCGAATTATTCCCATTTGTTCACATCTATTCCACATCGATTGTATCGACATTTGGCTGCAAAATAATCCCAATTGTCCACTTTGTCGAACCAGCATTTCTAGCTCTGTTATGTTTCATCCATTTCCTCTTCCGTGCTCCTCGCCGGAGGATCCAATCGGCGCCGGAACTGAAAGGGACTTTGTAGTGATTGAATTGGGTGGAATTAGAAACGACCCATCTGGCCAATTTTCACAAGAGCGGGCGAATTCAAGGGAATTGCCGGCGGTGAAATTGGAACAGGGGAAAAAATGGCAGAAGCTTCAGAAAGTGACGAGTTTAGGGGATGAGTGGATTGACACTAGAGAGAAAGATGAGCAATTTTATATTCAACCCATTAGACGGTCGGTTTCGATGGACTCGTCGGCGGAACGGCAGATGTATCTAGCGGTGCAGGCGGCACTGCAGCAGAGCCGCCATGGGAATGAGGTTAGTCCGGGTGGCGATGGGTGTAATGGGAGAGGGAGAAGGTCTCTGTTTTCTTTTGGAAATGGGAGAAGTTGTAGAAATGCTGTTCAAGTTCAACCTGTTCGTTTGGAAGAGAATTAA

mRNA sequence

ATGGATTTCTTCTCCAAAATCAAAACTTCCCAACATATTCCCCCTTTCCCACCTCCAAATCCTTCCCATTCCAGCTTCCCCATTATCGCCATTGCCATTATTGGAATTCTCGTCACTGCTTTTTTGCTTCTCAGCTACTATGTCTTCGTCATCAACTGTTGCCTCAACTGGCACCGCTTCGATCTCATTCGCCGCCTCTCCCCCTCCTCCACCCGCCCTCTCCCCTCCCCCACTGCCTACTCTCCGGCCCTCGAGACTCGGGGTCTTGACGAATCGGTGATTAGATCAATCCCTTTACTGCATTACAACAAATCAATGGCCAACCAAAAAACCTCATCTGAATGCGCTGTTTGTTTGAGTGAATTTCAAGAAGATGAGACTGTTCGAATTATTCCCATTTGTTCACATCTATTCCACATCGATTGTATCGACATTTGGCTGCAAAATAATCCCAATTGTCCACTTTGTCGAACCAGCATTTCTAGCTCTGTTATGTTTCATCCATTTCCTCTTCCGTGCTCCTCGCCGGAGGATCCAATCGGCGCCGGAACTGAAAGGGACTTTGTAGTGATTGAATTGGGTGGAATTAGAAACGACCCATCTGGCCAATTTTCACAAGAGCGGGCGAATTCAAGGGAATTGCCGGCGGTGAAATTGGAACAGGGGAAAAAATGGCAGAAGCTTCAGAAAGTGACGAGTTTAGGGGATGAGTGGATTGACACTAGAGAGAAAGATGAGCAATTTTATATTCAACCCATTAGACGGTCGGTTTCGATGGACTCGTCGGCGGAACGGCAGATGTATCTAGCGGTGCAGGCGGCACTGCAGCAGAGCCGCCATGGGAATGAGGTTAGTCCGGGTGGCGATGGGTGTAATGGGAGAGGGAGAAGGTCTCTGTTTTCTTTTGGAAATGGGAGAAGTTGTAGAAATGCTGTTCAAGTTCAACCTGTTCGTTTGGAAGAGAATTAA

Coding sequence (CDS)

ATGGATTTCTTCTCCAAAATCAAAACTTCCCAACATATTCCCCCTTTCCCACCTCCAAATCCTTCCCATTCCAGCTTCCCCATTATCGCCATTGCCATTATTGGAATTCTCGTCACTGCTTTTTTGCTTCTCAGCTACTATGTCTTCGTCATCAACTGTTGCCTCAACTGGCACCGCTTCGATCTCATTCGCCGCCTCTCCCCCTCCTCCACCCGCCCTCTCCCCTCCCCCACTGCCTACTCTCCGGCCCTCGAGACTCGGGGTCTTGACGAATCGGTGATTAGATCAATCCCTTTACTGCATTACAACAAATCAATGGCCAACCAAAAAACCTCATCTGAATGCGCTGTTTGTTTGAGTGAATTTCAAGAAGATGAGACTGTTCGAATTATTCCCATTTGTTCACATCTATTCCACATCGATTGTATCGACATTTGGCTGCAAAATAATCCCAATTGTCCACTTTGTCGAACCAGCATTTCTAGCTCTGTTATGTTTCATCCATTTCCTCTTCCGTGCTCCTCGCCGGAGGATCCAATCGGCGCCGGAACTGAAAGGGACTTTGTAGTGATTGAATTGGGTGGAATTAGAAACGACCCATCTGGCCAATTTTCACAAGAGCGGGCGAATTCAAGGGAATTGCCGGCGGTGAAATTGGAACAGGGGAAAAAATGGCAGAAGCTTCAGAAAGTGACGAGTTTAGGGGATGAGTGGATTGACACTAGAGAGAAAGATGAGCAATTTTATATTCAACCCATTAGACGGTCGGTTTCGATGGACTCGTCGGCGGAACGGCAGATGTATCTAGCGGTGCAGGCGGCACTGCAGCAGAGCCGCCATGGGAATGAGGTTAGTCCGGGTGGCGATGGGTGTAATGGGAGAGGGAGAAGGTCTCTGTTTTCTTTTGGAAATGGGAGAAGTTGTAGAAATGCTGTTCAAGTTCAACCTGTTCGTTTGGAAGAGAATTAA

Protein sequence

MDFFSKIKTSQHIPPFPPPNPSHSSFPIIAIAIIGILVTAFLLLSYYVFVINCCLNWHRFDLIRRLSPSSTRPLPSPTAYSPALETRGLDESVIRSIPLLHYNKSMANQKTSSECAVCLSEFQEDETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRTSISSSVMFHPFPLPCSSPEDPIGAGTERDFVVIELGGIRNDPSGQFSQERANSRELPAVKLEQGKKWQKLQKVTSLGDEWIDTREKDEQFYIQPIRRSVSMDSSAERQMYLAVQAALQQSRHGNEVSPGGDGCNGRGRRSLFSFGNGRSCRNAVQVQPVRLEEN*

Homology

[Close]

BLAST of Chy6G110100 vs. ExPASy Swiss-Prot
Match: Q9LSW9 (RING-H2 finger protein ATL16 OS=Arabidopsis thaliana OX=3702 GN=ATL16 PE=2 SV=1)

HSP 1 Score: 275.4 bits (703), Expect = 8.2e-73
Identity = 176/355 (49.58%), Postives = 221/355 (62.25%), Query Frame = 0


Query: 14  PPFPPPNPSH------SSFPIIAIAIIGILVTAFLLLSYYVFVINCCLNWHRFDLIRRLS 73
           PP PPP   H      +SFPI+A+A+IGIL TAFLL+SYYVFVI CCLNWHR D++ R S
Sbjct: 16  PPPPPPPIFHRASSTGTSFPILAVAVIGILATAFLLVSYYVFVIKCCLNWHRIDILGRFS 75

Query: 74  PSSTR-----PLPSPTAYSPALETRGLDESVIRSIPLLHYNK-------------SMANQ 133
            S  R     PL     YSP L +RGLDESVIR+IP+  + K                 +
Sbjct: 76  LSRRRRNDQDPL---MVYSPELRSRGLDESVIRAIPIFKFKKRYDQNDGVFTGEGEEEEE 135

Query: 134 KTSSECAVCLSEFQEDETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRTSISSSVMFHP- 193
           K S EC+VCLSEFQ++E +RIIP CSHLFHIDCID+WLQNN NCPLCRT +S    F P 
Sbjct: 136 KRSQECSVCLSEFQDEEKLRIIPNCSHLFHIDCIDVWLQNNANCPLCRTRVSCDTSFPPD 195

Query: 194 -FPLPCSSPEDPIGAGTERDFVVIELGGI----RNDP-SGQF--SQERANSREL------ 253
               P +SPE+ +    E ++VVIELG      R+ P  G+    QER+NS  L      
Sbjct: 196 RVSAPSTSPENLVMLRGENEYVVIELGSSIGSDRDSPRHGRLLTGQERSNSGYLLNENTQ 255

Query: 254 -----PAVKLEQG---KKWQKLQKVTSLGDEWIDTRE-KDEQF-YIQPIRRSVSMDSSAE 312
                   KL++G   +K++KL K+TS+GDE ID R  KDEQF  IQPIRRS+SMDSSA+
Sbjct: 256 NSISPSPKKLDRGGLPRKFRKLHKMTSMGDECIDIRRGKDEQFGSIQPIRRSISMDSSAD 315

[Close]

BLAST of Chy6G110100 vs. ExPASy Swiss-Prot
Match: P93823 (RING-H2 finger protein ATL1 OS=Arabidopsis thaliana OX=3702 GN=ATL1 PE=2 SV=1)

HSP 1 Score: 249.2 bits (635), Expect = 6.3e-65
Identity = 167/358 (46.65%), Postives = 206/358 (57.54%), Query Frame = 0


Query: 14  PPFPPPNPSHSSFPIIAIAIIGILVTAFLLLSYYVFVINCCLNWHRFDLIRRLSPSSTR- 73
           P FP  + S ++FPI+AIA+IGIL TAFLL+SYY+FVI CCLNWH+ D+ RR   SS + 
Sbjct: 29  PIFPRTSSSGTNFPILAIAVIGILATAFLLVSYYIFVIKCCLNWHQIDIFRRRRRSSDQN 88

Query: 74  PLPSPTAYSPALETRGLDESVIRSIPLLHYNK------SMANQKTSSECAVCLSEFQEDE 133
           PL     YSP    RGLDES IR+IP+  + K           K S EC+VCL+EFQEDE
Sbjct: 89  PL---MIYSPHEVNRGLDESAIRAIPVFKFKKRDVVAGEEDQSKNSQECSVCLNEFQEDE 148

Query: 134 TVRIIPICSHLFHIDCIDIWLQNNPNCPLCRTSISSSVMF------HPFPLPCSSP---- 193
            +RIIP C H+FHIDCIDIWLQ N NCPLCRTS+S    F       P     +SP    
Sbjct: 149 KLRIIPNCCHVFHIDCIDIWLQGNANCPLCRTSVSCEASFTLDLISAPSSPRENSPHSRN 208

Query: 194 ---EDPIGAGTERDFVVIELGGIRNDPSGQF-------SQERANSRE------------L 253
              E  +  G + DFVVIELG    +             QER  S E            L
Sbjct: 209 RNLEPGLVLGGDDDFVVIELGASNGNNRESVRNIDFLTEQERVTSNEVSTGNSPKSVSPL 268

Query: 254 PAVKLEQG--KKWQKLQKVTSLGDEWIDTREKDEQF-YIQPIRRSVSMDSSAERQMYLAV 313
           P     +G  KK +K  KVTS+GDE IDTR KD  F  IQPIRRS+SMDSS +RQ+YLAV
Sbjct: 269 PIKFGNRGMYKKERKFHKVTSMGDECIDTRGKDGHFGEIQPIRRSISMDSSVDRQLYLAV 328

Query: 314 QAALQQSRHGNEVSPGGDG----CNGRG-----RRSLFSFGNGRSCRNAVQVQPVRLE 321
           Q  +  SR   ++   GDG     +G G     +R  FSFG+ R+ +++  + PV LE
Sbjct: 329 QEEI--SRRNRQIPVAGDGEDSSSSGGGNSRVMKRCFFSFGSSRTSKSS-SILPVYLE 380

[Close]

BLAST of Chy6G110100 vs. ExPASy Swiss-Prot
Match: Q9LF64 (RING-H2 finger protein ATL52 OS=Arabidopsis thaliana OX=3702 GN=ATL52 PE=2 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 6.0e-23
Identity = 80/256 (31.25%), Postives = 128/256 (50.00%), Query Frame = 0


Query: 16  FPPPNP----------SHSSFPIIAIAIIGILVTAFLLLSYYVFVINCCLNWHRFDLIRR 75
           FPPP P          S SSF  + IA+IGIL +A +L+SYY  +   C   H+      
Sbjct: 34  FPPPPPSFFLDDDSSSSSSSFSPLLIALIGILTSALILVSYYTLISKYCHRHHQTSSSET 93

Query: 76  LSPSSTRPLPSPTAYSPALETRGLDESVIRSIPLLHYNKSMANQKTSSECAVCLSEFQED 135
           L+ +        +    +    GL+ES+I+SI +  Y KS       S+C+VCLSEF+E+
Sbjct: 94  LNLNHNGEGFFSSTQRISTNGDGLNESMIKSITVYKY-KSGDGFVDGSDCSVCLSEFEEN 153

Query: 136 ETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRTSISSSVMFHPFPLPCSSPEDPIGAGTE 195
           E++R++P C+H FH+ CID WL+++ NCPLCR  ++   + +P      +    +   + 
Sbjct: 154 ESLRLLPKCNHAFHLPCIDTWLKSHSNCPLCRAFVTG--VNNPTASVGQNVSVVVANQSN 213

Query: 196 RDFVVIELGGIRNDPSGQFSQERANSRELPAVKLEQGKKWQKLQKVTSLGDEWIDTREKD 255
                  +  I  + +G  SQ       +    LE G +    +    L +E  +T+++D
Sbjct: 214 SAHQTGSVSEINLNLAGYESQTGDFDSVVVIEDLEIGSRNSDARSELQLPEERRETKDED 273

Query: 256 EQFYIQPIRRSVSMDS 262
                 PIRRSVS++S
Sbjct: 274 S----LPIRRSVSLNS 282

[Close]

BLAST of Chy6G110100 vs. ExPASy Swiss-Prot
Match: Q9SRQ8 (RING-H2 finger protein ATL51 OS=Arabidopsis thaliana OX=3702 GN=ATL51 PE=2 SV=2)

HSP 1 Score: 106.3 bits (264), Expect = 6.6e-22
Identity = 69/175 (39.43%), Postives = 94/175 (53.71%), Query Frame = 0


Query: 16  FPPP---------NPSHSSFPIIAIAIIGILVTAFLLLSYYVFVINCCLNWHR------- 75
           FPPP         + S S F  + IA+IGIL +AF+L+SYY  +   C   HR       
Sbjct: 37  FPPPPSFYLDDEDDSSSSDFSPLLIALIGILASAFILVSYYTLISKYC---HRRRHNSSS 96

Query: 76  --FDLIRRLSPSST---------RPLPSPTAYSPALETRGLDESVIRSIPLLHYNKSMAN 135
                I R+S   T             +P          GLDES+I+SI +  Y K M  
Sbjct: 97  TSAAAINRISSDYTWQGTNNNNNNGATNPNQTIGGGGGDGLDESLIKSITVYKYRK-MDG 156

Query: 136 QKTSSECAVCLSEFQEDETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRTSISSS 164
              SS+C+VCLSEFQE+E++R++P C+H FH+ CID WL+++ NCPLCR  I +S
Sbjct: 157 FVESSDCSVCLSEFQENESLRLLPKCNHAFHVPCIDTWLKSHSNCPLCRAFIVTS 207

[Close]

BLAST of Chy6G110100 vs. ExPASy Swiss-Prot
Match: Q7XLY8 (E3 ubiquitin-protein ligase Os04g0590900 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0590900 PE=2 SV=2)

HSP 1 Score: 94.0 bits (232), Expect = 3.4e-18
Identity = 90/318 (28.30%), Postives = 138/318 (43.40%), Query Frame = 0


Query: 16  FPPPNP--------SHSSFPI---IAIAIIGILVTAFLLLSYYVFVINCC-----LNWHR 75
           FPPP P          SS P+   + IAIIG+L +AFLL+SYY F+   C     L    
Sbjct: 34  FPPPPPFDVAGTSADDSSGPVFSPLVIAIIGVLASAFLLVSYYTFISKYCGTVSSLRGRV 93

Query: 76  FDLIR-------------RLSPSSTRPLPSPTAYSPALETRGLDESVIRSIPLLHYNKSM 135
           F                 R     +R   S     P+    GLDE++I  I +  Y +  
Sbjct: 94  FGSSSGGAAYGGGAGSGGRHGHGQSRSHESWNVSPPS----GLDETLINKITVCKYRRGD 153

Query: 136 ANQKTSSECAVCLSEFQEDETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRTSIS--SSV 195
               T ++C+VCL EF + E++R++P CSH FH  CID WL+++ NCPLCR +I+  +  
Sbjct: 154 GFVHT-TDCSVCLGEFSDGESLRLLPRCSHAFHQQCIDTWLKSHSNCPLCRANITFVTVG 213

Query: 196 MFHPFPLPCSSPEDPIGAGTERDFVVIELGGIRN-DPSGQFSQERANSRELPAVKLEQGK 255
           +  P P  C+  E     G     VV+ + G+ N     Q +  RA++ +      +  +
Sbjct: 214 LASPEPEGCAPGET---GGDNTHEVVVVMDGLENLCEEQQEAVSRASTADDDHDAKDVAE 273

Query: 256 KWQKLQKVTSLGDEWIDTREKDEQFYIQPIRRSVSMD---SSAERQMYLAVQAALQQSRH 299
             ++      + +E    +     F +    R    D    S E ++  A ++ L     
Sbjct: 274 GMEEANGAAEIREEGSPPKRGASSFDLHRDNRMCIADVLQESMEDELTAARESGLLAGGA 333

[Close]

BLAST of Chy6G110100 vs. ExPASy TrEMBL
Match: A0A0A0L8B0 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G135640 PE=4 SV=1)

HSP 1 Score: 624.0 bits (1608), Expect = 3.5e-175
Identity = 307/322 (95.34%), Postives = 313/322 (97.20%), Query Frame = 0


Query: 1   MDFFSKIKTSQHIPPFPPPNPSHSSFPIIAIAIIGILVTAFLLLSYYVFVINCCLNWHRF 60
           MDFF+KIKTSQHIPPFPPPNPSHSSFPIIAIAIIGILVTAFLLLSYYVFVINCCLNWHRF
Sbjct: 1   MDFFTKIKTSQHIPPFPPPNPSHSSFPIIAIAIIGILVTAFLLLSYYVFVINCCLNWHRF 60

Query: 61  DLIRRLSPSSTRPLPSPTAYSPALETRGLDESVIRSIPLLHYNKSMANQKTSSECAVCLS 120
           DLIRRLSPSSTRPLPSPTAYSPAL TRGLDESVIRSIPLLHYNKSM N KTSSECAVCLS
Sbjct: 61  DLIRRLSPSSTRPLPSPTAYSPALHTRGLDESVIRSIPLLHYNKSMPNHKTSSECAVCLS 120

Query: 121 EFQEDETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRTSISSSVMFHPFPLPCSSPEDPI 180
           EFQE ETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRT+ISSS++FHPFPLP SSPEDPI
Sbjct: 121 EFQEHETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRTTISSSLLFHPFPLPSSSPEDPI 180

Query: 181 GAGTERDFVVIELGGIRNDPSGQFSQERANSRELPAVKLEQGKKWQKLQKVTSLGDEWID 240
            A TERDF+VIELGGIRN PSGQFSQERANSRELPAVKLEQGKKWQKLQKVTSLGDEWID
Sbjct: 181 AAATERDFLVIELGGIRNHPSGQFSQERANSRELPAVKLEQGKKWQKLQKVTSLGDEWID 240

Query: 241 TREKDEQFYIQPIRRSVSMDSSAERQMYLAVQAALQQSRHGNEVSPGGDGCNGRGRRSLF 300
           TREKDEQF IQPIRRSVSMDSSAERQMY+AVQAALQQSRHGNEVSPGGDGCNGRGRRSLF
Sbjct: 241 TREKDEQFCIQPIRRSVSMDSSAERQMYVAVQAALQQSRHGNEVSPGGDGCNGRGRRSLF 300

Query: 301 SFGNGRSCRNAVQVQPVRLEEN 323
           SFGNGRSCRNAVQVQPVRLEEN
Sbjct: 301 SFGNGRSCRNAVQVQPVRLEEN 322

[Close]

BLAST of Chy6G110100 vs. ExPASy TrEMBL
Match: A0A5D3D010 (RING-H2 finger protein ATL16 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G001510 PE=4 SV=1)

HSP 1 Score: 618.2 bits (1593), Expect = 1.9e-173
Identity = 305/322 (94.72%), Postives = 313/322 (97.20%), Query Frame = 0


Query: 1   MDFFSKIKTSQHIPPFPPPNPSHSSFPIIAIAIIGILVTAFLLLSYYVFVINCCLNWHRF 60
           MDFF+KIKTSQHIPPFPPPNPSHSSFPIIAIAIIGILVTAFLLLSYYVFVINCCLNWHRF
Sbjct: 1   MDFFTKIKTSQHIPPFPPPNPSHSSFPIIAIAIIGILVTAFLLLSYYVFVINCCLNWHRF 60

Query: 61  DLIRRLSPSSTRPLPSPTAYSPALETRGLDESVIRSIPLLHYNKSMANQKTSSECAVCLS 120
           DLIRRLSPSSTR LPSPTAYSPA ETRGLDESVIRSIPLLHY KSM N+KT SECAVCLS
Sbjct: 61  DLIRRLSPSSTRRLPSPTAYSPAFETRGLDESVIRSIPLLHYKKSMPNEKTLSECAVCLS 120

Query: 121 EFQEDETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRTSISSSVMFHPFPLPCSSPEDPI 180
           EF+EDETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRTSISSSV+FH FPLP SSPEDPI
Sbjct: 121 EFEEDETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRTSISSSVLFHRFPLPSSSPEDPI 180

Query: 181 GAGTERDFVVIELGGIRNDPSGQFSQERANSRELPAVKLEQGKKWQKLQKVTSLGDEWID 240
           GAG ERDFVVIELGGIRNDPSGQFSQERANSRELPAVKLEQGKKWQKLQKVTSLGDEWID
Sbjct: 181 GAGGERDFVVIELGGIRNDPSGQFSQERANSRELPAVKLEQGKKWQKLQKVTSLGDEWID 240

Query: 241 TREKDEQFYIQPIRRSVSMDSSAERQMYLAVQAALQQSRHGNEVSPGGDGCNGRGRRSLF 300
           TREKDEQF+IQPIRRSVSMDSSAERQMYLAVQAALQQSR G+EVSPGGDGCNGRGRRSLF
Sbjct: 241 TREKDEQFFIQPIRRSVSMDSSAERQMYLAVQAALQQSRRGSEVSPGGDGCNGRGRRSLF 300

Query: 301 SFGNGRSCRNAVQVQPVRLEEN 323
           SFGNGRSCR++VQVQPVRLEEN
Sbjct: 301 SFGNGRSCRSSVQVQPVRLEEN 322

[Close]

BLAST of Chy6G110100 vs. ExPASy TrEMBL
Match: A0A1S3AWQ9 (RING-H2 finger protein ATL16 OS=Cucumis melo OX=3656 GN=LOC103483603 PE=4 SV=1)

HSP 1 Score: 618.2 bits (1593), Expect = 1.9e-173
Identity = 305/322 (94.72%), Postives = 313/322 (97.20%), Query Frame = 0


Query: 1   MDFFSKIKTSQHIPPFPPPNPSHSSFPIIAIAIIGILVTAFLLLSYYVFVINCCLNWHRF 60
           MDFF+KIKTSQHIPPFPPPNPSHSSFPIIAIAIIGILVTAFLLLSYYVFVINCCLNWHRF
Sbjct: 1   MDFFTKIKTSQHIPPFPPPNPSHSSFPIIAIAIIGILVTAFLLLSYYVFVINCCLNWHRF 60

Query: 61  DLIRRLSPSSTRPLPSPTAYSPALETRGLDESVIRSIPLLHYNKSMANQKTSSECAVCLS 120
           DLIRRLSPSSTR LPSPTAYSPA ETRGLDESVIRSIPLLHY KSM N+KT SECAVCLS
Sbjct: 61  DLIRRLSPSSTRRLPSPTAYSPAFETRGLDESVIRSIPLLHYKKSMPNEKTLSECAVCLS 120

Query: 121 EFQEDETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRTSISSSVMFHPFPLPCSSPEDPI 180
           EF+EDETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRTSISSSV+FH FPLP SSPEDPI
Sbjct: 121 EFEEDETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRTSISSSVLFHRFPLPSSSPEDPI 180

Query: 181 GAGTERDFVVIELGGIRNDPSGQFSQERANSRELPAVKLEQGKKWQKLQKVTSLGDEWID 240
           GAG ERDFVVIELGGIRNDPSGQFSQERANSRELPAVKLEQGKKWQKLQKVTSLGDEWID
Sbjct: 181 GAGGERDFVVIELGGIRNDPSGQFSQERANSRELPAVKLEQGKKWQKLQKVTSLGDEWID 240

Query: 241 TREKDEQFYIQPIRRSVSMDSSAERQMYLAVQAALQQSRHGNEVSPGGDGCNGRGRRSLF 300
           TREKDEQF+IQPIRRSVSMDSSAERQMYLAVQAALQQSR G+EVSPGGDGCNGRGRRSLF
Sbjct: 241 TREKDEQFFIQPIRRSVSMDSSAERQMYLAVQAALQQSRRGSEVSPGGDGCNGRGRRSLF 300

Query: 301 SFGNGRSCRNAVQVQPVRLEEN 323
           SFGNGRSCR++VQVQPVRLEEN
Sbjct: 301 SFGNGRSCRSSVQVQPVRLEEN 322

[Close]

BLAST of Chy6G110100 vs. ExPASy TrEMBL
Match: A0A6J1IJC3 (RING-H2 finger protein ATL16-like OS=Cucurbita maxima OX=3661 GN=LOC111474033 PE=4 SV=1)

HSP 1 Score: 514.6 bits (1324), Expect = 3.0e-142
Identity = 261/327 (79.82%), Postives = 283/327 (86.54%), Query Frame = 0


Query: 1   MDFFSKIKTSQHIPPFPPPNPSHS---SFPIIAIAIIGILVTAFLLLSYYVFVINCCLNW 60
           M+FF +IK+SQ++PPFPPPNPSHS   SFPIIAIAIIGIL TAFLLLSYYVFVINCCLNW
Sbjct: 1   MEFFPQIKSSQYLPPFPPPNPSHSDSTSFPIIAIAIIGILATAFLLLSYYVFVINCCLNW 60

Query: 61  HRFDLIRRLSPSSTRPLPSPTAYSPALETRGLDESVIRSIPLLHYNKSMANQKTSSECAV 120
           HR DL+RRLS SS R  P+P  +SP ++TRGLDESVIRSIPL+ Y  S+A  KTSSEC+V
Sbjct: 61  HRIDLLRRLSLSSRRRRPAPNTHSPPIDTRGLDESVIRSIPLVQYKNSIARGKTSSECSV 120

Query: 121 CLSEFQEDETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRTSISSSVMFHPFPLPCSSPE 180
           CLSEF EDETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRT+ISSS +FH FPLP SSP 
Sbjct: 121 CLSEFGEDETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRTTISSSALFHRFPLPTSSPA 180

Query: 181 DPIGAGTERDFVVIELGGIRNDPSGQFSQERANSRELPAV--KLEQGKKWQKLQKVTSLG 240
           +PIG G ERDFVVIELGGIRNDPSGQ SQER NS E PA   KLEQGKK  KLQKVTSLG
Sbjct: 181 EPIGGGNERDFVVIELGGIRNDPSGQLSQERPNSGECPATTGKLEQGKKRWKLQKVTSLG 240

Query: 241 DEWIDTREKDEQFYIQPIRRSVSMDSSAERQMYLAVQAALQQSRHGNEVSPGGDGCNGRG 300
           DEWIDTREKDE+F +QPIRRSVSMDSSAERQMYLAVQAAL+    G+  SPGGDGCNGRG
Sbjct: 241 DEWIDTREKDERFCVQPIRRSVSMDSSAERQMYLAVQAALR----GSTASPGGDGCNGRG 300

Query: 301 RRSLFSFGNGRSCRNAVQVQPVRLEEN 323
           RRSLFSFGNG SCRN V+VQ VRLEE+
Sbjct: 301 RRSLFSFGNGMSCRNGVEVQAVRLEES 323

[Close]

BLAST of Chy6G110100 vs. ExPASy TrEMBL
Match: A0A6J1FW76 (RING-H2 finger protein ATL16 OS=Cucurbita moschata OX=3662 GN=LOC111447447 PE=4 SV=1)

HSP 1 Score: 508.4 bits (1308), Expect = 2.1e-140
Identity = 259/327 (79.20%), Postives = 280/327 (85.63%), Query Frame = 0


Query: 1   MDFFSKIKTSQHIPPFPPPNPSHS---SFPIIAIAIIGILVTAFLLLSYYVFVINCCLNW 60
           M+ F ++K+S ++PPFPPP PSHS   SFPIIAIAIIGIL TAFLLLSYYVFVINCCLNW
Sbjct: 1   MESFPQLKSSHYLPPFPPPIPSHSDSTSFPIIAIAIIGILATAFLLLSYYVFVINCCLNW 60

Query: 61  HRFDLIRRLSPSSTRPLPSPTAYSPALETRGLDESVIRSIPLLHYNKSMANQKTSSECAV 120
           HR DL+RRLS SS R  P PT +SP + TRGLDESVIRSIPL+ Y  S+A  KTSSEC+V
Sbjct: 61  HRIDLLRRLSLSSRRRRPPPTTHSPPIHTRGLDESVIRSIPLVQYKNSIARGKTSSECSV 120

Query: 121 CLSEFQEDETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRTSISSSVMFHPFPLPCSSPE 180
           CLSEF EDETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRT+ISSS +FH FPLP SSP 
Sbjct: 121 CLSEFGEDETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRTTISSSTLFHRFPLPTSSPA 180

Query: 181 DPIGAGTERDFVVIELGGIRNDPSGQFSQERANSRELPAV--KLEQGKKWQKLQKVTSLG 240
           DPIG G ERDFVVIELGGIRNDPSGQ SQER NS E PA   KLEQGKK +KLQKVTSLG
Sbjct: 181 DPIGGGNERDFVVIELGGIRNDPSGQLSQERPNSGECPAAAGKLEQGKKRRKLQKVTSLG 240

Query: 241 DEWIDTREKDEQFYIQPIRRSVSMDSSAERQMYLAVQAALQQSRHGNEVSPGGDGCNGRG 300
           DEWIDTREKDE+F +QPIRRSVSMDSSAERQMYLAVQAAL+    G+  SPGGDGCNGRG
Sbjct: 241 DEWIDTREKDERFCVQPIRRSVSMDSSAERQMYLAVQAALR----GSTASPGGDGCNGRG 300

Query: 301 RRSLFSFGNGRSCRNAVQVQPVRLEEN 323
           RRSLFSFGNG SCRN V+VQ VRLEE+
Sbjct: 301 RRSLFSFGNGMSCRNGVEVQAVRLEES 323

[Close]

BLAST of Chy6G110100 vs. NCBI nr
Match: XP_004134414.1 (RING-H2 finger protein ATL16 [Cucumis sativus])

HSP 1 Score: 623 bits (1607), Expect = 8.90e-225
Identity = 307/322 (95.34%), Postives = 313/322 (97.20%), Query Frame = 0


Query: 1   MDFFSKIKTSQHIPPFPPPNPSHSSFPIIAIAIIGILVTAFLLLSYYVFVINCCLNWHRF 60
           MDFF+KIKTSQHIPPFPPPNPSHSSFPIIAIAIIGILVTAFLLLSYYVFVINCCLNWHRF
Sbjct: 1   MDFFTKIKTSQHIPPFPPPNPSHSSFPIIAIAIIGILVTAFLLLSYYVFVINCCLNWHRF 60

Query: 61  DLIRRLSPSSTRPLPSPTAYSPALETRGLDESVIRSIPLLHYNKSMANQKTSSECAVCLS 120
           DLIRRLSPSSTRPLPSPTAYSPAL TRGLDESVIRSIPLLHYNKSM N KTSSECAVCLS
Sbjct: 61  DLIRRLSPSSTRPLPSPTAYSPALHTRGLDESVIRSIPLLHYNKSMPNHKTSSECAVCLS 120

Query: 121 EFQEDETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRTSISSSVMFHPFPLPCSSPEDPI 180
           EFQE ETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRT+ISSS++FHPFPLP SSPEDPI
Sbjct: 121 EFQEHETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRTTISSSLLFHPFPLPSSSPEDPI 180

Query: 181 GAGTERDFVVIELGGIRNDPSGQFSQERANSRELPAVKLEQGKKWQKLQKVTSLGDEWID 240
            A TERDF+VIELGGIRN PSGQFSQERANSRELPAVKLEQGKKWQKLQKVTSLGDEWID
Sbjct: 181 AAATERDFLVIELGGIRNHPSGQFSQERANSRELPAVKLEQGKKWQKLQKVTSLGDEWID 240

Query: 241 TREKDEQFYIQPIRRSVSMDSSAERQMYLAVQAALQQSRHGNEVSPGGDGCNGRGRRSLF 300
           TREKDEQF IQPIRRSVSMDSSAERQMY+AVQAALQQSRHGNEVSPGGDGCNGRGRRSLF
Sbjct: 241 TREKDEQFCIQPIRRSVSMDSSAERQMYVAVQAALQQSRHGNEVSPGGDGCNGRGRRSLF 300

Query: 301 SFGNGRSCRNAVQVQPVRLEEN 322
           SFGNGRSCRNAVQVQPVRLEEN
Sbjct: 301 SFGNGRSCRNAVQVQPVRLEEN 322

[Close]

BLAST of Chy6G110100 vs. NCBI nr
Match: XP_008438538.1 (PREDICTED: RING-H2 finger protein ATL16 [Cucumis melo] >KAA0049260.1 RING-H2 finger protein ATL16 [Cucumis melo var. makuwa] >TYK17297.1 RING-H2 finger protein ATL16 [Cucumis melo var. makuwa])

HSP 1 Score: 617 bits (1592), Expect = 1.72e-222
Identity = 305/322 (94.72%), Postives = 313/322 (97.20%), Query Frame = 0


Query: 1   MDFFSKIKTSQHIPPFPPPNPSHSSFPIIAIAIIGILVTAFLLLSYYVFVINCCLNWHRF 60
           MDFF+KIKTSQHIPPFPPPNPSHSSFPIIAIAIIGILVTAFLLLSYYVFVINCCLNWHRF
Sbjct: 1   MDFFTKIKTSQHIPPFPPPNPSHSSFPIIAIAIIGILVTAFLLLSYYVFVINCCLNWHRF 60

Query: 61  DLIRRLSPSSTRPLPSPTAYSPALETRGLDESVIRSIPLLHYNKSMANQKTSSECAVCLS 120
           DLIRRLSPSSTR LPSPTAYSPA ETRGLDESVIRSIPLLHY KSM N+KT SECAVCLS
Sbjct: 61  DLIRRLSPSSTRRLPSPTAYSPAFETRGLDESVIRSIPLLHYKKSMPNEKTLSECAVCLS 120

Query: 121 EFQEDETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRTSISSSVMFHPFPLPCSSPEDPI 180
           EF+EDETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRTSISSSV+FH FPLP SSPEDPI
Sbjct: 121 EFEEDETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRTSISSSVLFHRFPLPSSSPEDPI 180

Query: 181 GAGTERDFVVIELGGIRNDPSGQFSQERANSRELPAVKLEQGKKWQKLQKVTSLGDEWID 240
           GAG ERDFVVIELGGIRNDPSGQFSQERANSRELPAVKLEQGKKWQKLQKVTSLGDEWID
Sbjct: 181 GAGGERDFVVIELGGIRNDPSGQFSQERANSRELPAVKLEQGKKWQKLQKVTSLGDEWID 240

Query: 241 TREKDEQFYIQPIRRSVSMDSSAERQMYLAVQAALQQSRHGNEVSPGGDGCNGRGRRSLF 300
           TREKDEQF+IQPIRRSVSMDSSAERQMYLAVQAALQQSR G+EVSPGGDGCNGRGRRSLF
Sbjct: 241 TREKDEQFFIQPIRRSVSMDSSAERQMYLAVQAALQQSRRGSEVSPGGDGCNGRGRRSLF 300

Query: 301 SFGNGRSCRNAVQVQPVRLEEN 322
           SFGNGRSCR++VQVQPVRLEEN
Sbjct: 301 SFGNGRSCRSSVQVQPVRLEEN 322

[Close]

BLAST of Chy6G110100 vs. NCBI nr
Match: XP_038877360.1 (RING-H2 finger protein ATL16 [Benincasa hispida])

HSP 1 Score: 572 bits (1475), Expect = 1.30e-204
Identity = 286/325 (88.00%), Postives = 301/325 (92.62%), Query Frame = 0


Query: 1   MDFFSKIKTSQHIPPFPPPN---PSHSSFPIIAIAIIGILVTAFLLLSYYVFVINCCLNW 60
           MDFF+KI+TSQHIPPFPPPN   PSHSSFPII IAIIGIL TA LLLSYYVFVINCCLNW
Sbjct: 1   MDFFTKIRTSQHIPPFPPPNLPNPSHSSFPIIVIAIIGILATALLLLSYYVFVINCCLNW 60

Query: 61  HRFDLIRRLSPSSTRPLPSPTAYSPALETRGLDESVIRSIPLLHYNKSMANQKTSSECAV 120
           HR DL+RRLSPSSTR LPSPTAYSPA+E RGLD+SVIRSIPLL Y KS+  +KTSSECAV
Sbjct: 61  HRIDLLRRLSPSSTRRLPSPTAYSPAIENRGLDDSVIRSIPLLQYKKSVPKEKTSSECAV 120

Query: 121 CLSEFQEDETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRTSISSSVMFHPFPLPCSSPE 180
           CLSEF+EDETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRT+ISSSV+FH FPLP SSPE
Sbjct: 121 CLSEFEEDETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRTTISSSVLFHRFPLPSSSPE 180

Query: 181 DPIGAGTERDFVVIELGGIRNDPSGQFSQERANSRELPAVKLEQGKKWQKLQKVTSLGDE 240
           DPIG G ERDFVVIELGG RNDPSGQFSQ+RA+S ELPA KLEQGKK +KLQKVTSLGDE
Sbjct: 181 DPIGGGGERDFVVIELGGNRNDPSGQFSQDRASSGELPAGKLEQGKKRRKLQKVTSLGDE 240

Query: 241 WIDTREKDEQFYIQPIRRSVSMDSSAERQMYLAVQAALQQSRHGNEVSPGGDGCNGRGRR 300
           WIDTR+KDEQF IQPIRRSVSMDSSAERQMYLAVQAALQQSR G+ VSPGGDGCNGRGRR
Sbjct: 241 WIDTRQKDEQFCIQPIRRSVSMDSSAERQMYLAVQAALQQSRRGSAVSPGGDGCNGRGRR 300

Query: 301 SLFSFGNGRSCRNAVQVQPVRLEEN 322
           SLFSFGNGRSCRNAVQVQPVRLEEN
Sbjct: 301 SLFSFGNGRSCRNAVQVQPVRLEEN 325

[Close]

BLAST of Chy6G110100 vs. NCBI nr
Match: XP_022975064.1 (RING-H2 finger protein ATL16-like [Cucurbita maxima])

HSP 1 Score: 513 bits (1322), Expect = 2.44e-181
Identity = 261/327 (79.82%), Postives = 283/327 (86.54%), Query Frame = 0


Query: 1   MDFFSKIKTSQHIPPFPPPNPSHS---SFPIIAIAIIGILVTAFLLLSYYVFVINCCLNW 60
           M+FF +IK+SQ++PPFPPPNPSHS   SFPIIAIAIIGIL TAFLLLSYYVFVINCCLNW
Sbjct: 1   MEFFPQIKSSQYLPPFPPPNPSHSDSTSFPIIAIAIIGILATAFLLLSYYVFVINCCLNW 60

Query: 61  HRFDLIRRLSPSSTRPLPSPTAYSPALETRGLDESVIRSIPLLHYNKSMANQKTSSECAV 120
           HR DL+RRLS SS R  P+P  +SP ++TRGLDESVIRSIPL+ Y  S+A  KTSSEC+V
Sbjct: 61  HRIDLLRRLSLSSRRRRPAPNTHSPPIDTRGLDESVIRSIPLVQYKNSIARGKTSSECSV 120

Query: 121 CLSEFQEDETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRTSISSSVMFHPFPLPCSSPE 180
           CLSEF EDETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRT+ISSS +FH FPLP SSP 
Sbjct: 121 CLSEFGEDETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRTTISSSALFHRFPLPTSSPA 180

Query: 181 DPIGAGTERDFVVIELGGIRNDPSGQFSQERANSRELPAV--KLEQGKKWQKLQKVTSLG 240
           +PIG G ERDFVVIELGGIRNDPSGQ SQER NS E PA   KLEQGKK  KLQKVTSLG
Sbjct: 181 EPIGGGNERDFVVIELGGIRNDPSGQLSQERPNSGECPATTGKLEQGKKRWKLQKVTSLG 240

Query: 241 DEWIDTREKDEQFYIQPIRRSVSMDSSAERQMYLAVQAALQQSRHGNEVSPGGDGCNGRG 300
           DEWIDTREKDE+F +QPIRRSVSMDSSAERQMYLAVQAAL+    G+  SPGGDGCNGRG
Sbjct: 241 DEWIDTREKDERFCVQPIRRSVSMDSSAERQMYLAVQAALR----GSTASPGGDGCNGRG 300

Query: 301 RRSLFSFGNGRSCRNAVQVQPVRLEEN 322
           RRSLFSFGNG SCRN V+VQ VRLEE+
Sbjct: 301 RRSLFSFGNGMSCRNGVEVQAVRLEES 323

[Close]

BLAST of Chy6G110100 vs. NCBI nr
Match: XP_022942390.1 (RING-H2 finger protein ATL16 [Cucurbita moschata])

HSP 1 Score: 507 bits (1306), Expect = 6.66e-179
Identity = 259/327 (79.20%), Postives = 280/327 (85.63%), Query Frame = 0


Query: 1   MDFFSKIKTSQHIPPFPPPNPSHS---SFPIIAIAIIGILVTAFLLLSYYVFVINCCLNW 60
           M+ F ++K+S ++PPFPPP PSHS   SFPIIAIAIIGIL TAFLLLSYYVFVINCCLNW
Sbjct: 1   MESFPQLKSSHYLPPFPPPIPSHSDSTSFPIIAIAIIGILATAFLLLSYYVFVINCCLNW 60

Query: 61  HRFDLIRRLSPSSTRPLPSPTAYSPALETRGLDESVIRSIPLLHYNKSMANQKTSSECAV 120
           HR DL+RRLS SS R  P PT +SP + TRGLDESVIRSIPL+ Y  S+A  KTSSEC+V
Sbjct: 61  HRIDLLRRLSLSSRRRRPPPTTHSPPIHTRGLDESVIRSIPLVQYKNSIARGKTSSECSV 120

Query: 121 CLSEFQEDETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRTSISSSVMFHPFPLPCSSPE 180
           CLSEF EDETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRT+ISSS +FH FPLP SSP 
Sbjct: 121 CLSEFGEDETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRTTISSSTLFHRFPLPTSSPA 180

Query: 181 DPIGAGTERDFVVIELGGIRNDPSGQFSQERANSRELPAV--KLEQGKKWQKLQKVTSLG 240
           DPIG G ERDFVVIELGGIRNDPSGQ SQER NS E PA   KLEQGKK +KLQKVTSLG
Sbjct: 181 DPIGGGNERDFVVIELGGIRNDPSGQLSQERPNSGECPAAAGKLEQGKKRRKLQKVTSLG 240

Query: 241 DEWIDTREKDEQFYIQPIRRSVSMDSSAERQMYLAVQAALQQSRHGNEVSPGGDGCNGRG 300
           DEWIDTREKDE+F +QPIRRSVSMDSSAERQMYLAVQAAL+    G+  SPGGDGCNGRG
Sbjct: 241 DEWIDTREKDERFCVQPIRRSVSMDSSAERQMYLAVQAALR----GSTASPGGDGCNGRG 300

Query: 301 RRSLFSFGNGRSCRNAVQVQPVRLEEN 322
           RRSLFSFGNG SCRN V+VQ VRLEE+
Sbjct: 301 RRSLFSFGNGMSCRNGVEVQAVRLEES 323

[Close]

BLAST of Chy6G110100 vs. TAIR 10
Match: AT5G43420.1 (RING/U-box superfamily protein )

HSP 1 Score: 275.4 bits (703), Expect = 5.8e-74
Identity = 176/355 (49.58%), Postives = 221/355 (62.25%), Query Frame = 0


Query: 14  PPFPPPNPSH------SSFPIIAIAIIGILVTAFLLLSYYVFVINCCLNWHRFDLIRRLS 73
           PP PPP   H      +SFPI+A+A+IGIL TAFLL+SYYVFVI CCLNWHR D++ R S
Sbjct: 16  PPPPPPPIFHRASSTGTSFPILAVAVIGILATAFLLVSYYVFVIKCCLNWHRIDILGRFS 75

Query: 74  PSSTR-----PLPSPTAYSPALETRGLDESVIRSIPLLHYNK-------------SMANQ 133
            S  R     PL     YSP L +RGLDESVIR+IP+  + K                 +
Sbjct: 76  LSRRRRNDQDPL---MVYSPELRSRGLDESVIRAIPIFKFKKRYDQNDGVFTGEGEEEEE 135

Query: 134 KTSSECAVCLSEFQEDETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRTSISSSVMFHP- 193
           K S EC+VCLSEFQ++E +RIIP CSHLFHIDCID+WLQNN NCPLCRT +S    F P 
Sbjct: 136 KRSQECSVCLSEFQDEEKLRIIPNCSHLFHIDCIDVWLQNNANCPLCRTRVSCDTSFPPD 195

Query: 194 -FPLPCSSPEDPIGAGTERDFVVIELGGI----RNDP-SGQF--SQERANSREL------ 253
               P +SPE+ +    E ++VVIELG      R+ P  G+    QER+NS  L      
Sbjct: 196 RVSAPSTSPENLVMLRGENEYVVIELGSSIGSDRDSPRHGRLLTGQERSNSGYLLNENTQ 255

Query: 254 -----PAVKLEQG---KKWQKLQKVTSLGDEWIDTRE-KDEQF-YIQPIRRSVSMDSSAE 312
                   KL++G   +K++KL K+TS+GDE ID R  KDEQF  IQPIRRS+SMDSSA+
Sbjct: 256 NSISPSPKKLDRGGLPRKFRKLHKMTSMGDECIDIRRGKDEQFGSIQPIRRSISMDSSAD 315

[Close]

BLAST of Chy6G110100 vs. TAIR 10
Match: AT1G04360.1 (RING/U-box superfamily protein )

HSP 1 Score: 249.2 bits (635), Expect = 4.5e-66
Identity = 167/358 (46.65%), Postives = 206/358 (57.54%), Query Frame = 0


Query: 14  PPFPPPNPSHSSFPIIAIAIIGILVTAFLLLSYYVFVINCCLNWHRFDLIRRLSPSSTR- 73
           P FP  + S ++FPI+AIA+IGIL TAFLL+SYY+FVI CCLNWH+ D+ RR   SS + 
Sbjct: 29  PIFPRTSSSGTNFPILAIAVIGILATAFLLVSYYIFVIKCCLNWHQIDIFRRRRRSSDQN 88

Query: 74  PLPSPTAYSPALETRGLDESVIRSIPLLHYNK------SMANQKTSSECAVCLSEFQEDE 133
           PL     YSP    RGLDES IR+IP+  + K           K S EC+VCL+EFQEDE
Sbjct: 89  PL---MIYSPHEVNRGLDESAIRAIPVFKFKKRDVVAGEEDQSKNSQECSVCLNEFQEDE 148

Query: 134 TVRIIPICSHLFHIDCIDIWLQNNPNCPLCRTSISSSVMF------HPFPLPCSSP---- 193
            +RIIP C H+FHIDCIDIWLQ N NCPLCRTS+S    F       P     +SP    
Sbjct: 149 KLRIIPNCCHVFHIDCIDIWLQGNANCPLCRTSVSCEASFTLDLISAPSSPRENSPHSRN 208

Query: 194 ---EDPIGAGTERDFVVIELGGIRNDPSGQF-------SQERANSRE------------L 253
              E  +  G + DFVVIELG    +             QER  S E            L
Sbjct: 209 RNLEPGLVLGGDDDFVVIELGASNGNNRESVRNIDFLTEQERVTSNEVSTGNSPKSVSPL 268

Query: 254 PAVKLEQG--KKWQKLQKVTSLGDEWIDTREKDEQF-YIQPIRRSVSMDSSAERQMYLAV 313
           P     +G  KK +K  KVTS+GDE IDTR KD  F  IQPIRRS+SMDSS +RQ+YLAV
Sbjct: 269 PIKFGNRGMYKKERKFHKVTSMGDECIDTRGKDGHFGEIQPIRRSISMDSSVDRQLYLAV 328

Query: 314 QAALQQSRHGNEVSPGGDG----CNGRG-----RRSLFSFGNGRSCRNAVQVQPVRLE 321
           Q  +  SR   ++   GDG     +G G     +R  FSFG+ R+ +++  + PV LE
Sbjct: 329 QEEI--SRRNRQIPVAGDGEDSSSSGGGNSRVMKRCFFSFGSSRTSKSS-SILPVYLE 380

[Close]

BLAST of Chy6G110100 vs. TAIR 10
Match: AT5G17600.1 (RING/U-box superfamily protein )

HSP 1 Score: 109.8 bits (273), Expect = 4.2e-24
Identity = 80/256 (31.25%), Postives = 128/256 (50.00%), Query Frame = 0


Query: 16  FPPPNP----------SHSSFPIIAIAIIGILVTAFLLLSYYVFVINCCLNWHRFDLIRR 75
           FPPP P          S SSF  + IA+IGIL +A +L+SYY  +   C   H+      
Sbjct: 34  FPPPPPSFFLDDDSSSSSSSFSPLLIALIGILTSALILVSYYTLISKYCHRHHQTSSSET 93

Query: 76  LSPSSTRPLPSPTAYSPALETRGLDESVIRSIPLLHYNKSMANQKTSSECAVCLSEFQED 135
           L+ +        +    +    GL+ES+I+SI +  Y KS       S+C+VCLSEF+E+
Sbjct: 94  LNLNHNGEGFFSSTQRISTNGDGLNESMIKSITVYKY-KSGDGFVDGSDCSVCLSEFEEN 153

Query: 136 ETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRTSISSSVMFHPFPLPCSSPEDPIGAGTE 195
           E++R++P C+H FH+ CID WL+++ NCPLCR  ++   + +P      +    +   + 
Sbjct: 154 ESLRLLPKCNHAFHLPCIDTWLKSHSNCPLCRAFVTG--VNNPTASVGQNVSVVVANQSN 213

Query: 196 RDFVVIELGGIRNDPSGQFSQERANSRELPAVKLEQGKKWQKLQKVTSLGDEWIDTREKD 255
                  +  I  + +G  SQ       +    LE G +    +    L +E  +T+++D
Sbjct: 214 SAHQTGSVSEINLNLAGYESQTGDFDSVVVIEDLEIGSRNSDARSELQLPEERRETKDED 273

Query: 256 EQFYIQPIRRSVSMDS 262
                 PIRRSVS++S
Sbjct: 274 S----LPIRRSVSLNS 282

[Close]

BLAST of Chy6G110100 vs. TAIR 10
Match: AT3G03550.1 (RING/U-box superfamily protein )

HSP 1 Score: 106.3 bits (264), Expect = 4.7e-23
Identity = 69/175 (39.43%), Postives = 94/175 (53.71%), Query Frame = 0


Query: 16  FPPP---------NPSHSSFPIIAIAIIGILVTAFLLLSYYVFVINCCLNWHR------- 75
           FPPP         + S S F  + IA+IGIL +AF+L+SYY  +   C   HR       
Sbjct: 37  FPPPPSFYLDDEDDSSSSDFSPLLIALIGILASAFILVSYYTLISKYC---HRRRHNSSS 96

Query: 76  --FDLIRRLSPSST---------RPLPSPTAYSPALETRGLDESVIRSIPLLHYNKSMAN 135
                I R+S   T             +P          GLDES+I+SI +  Y K M  
Sbjct: 97  TSAAAINRISSDYTWQGTNNNNNNGATNPNQTIGGGGGDGLDESLIKSITVYKYRK-MDG 156

Query: 136 QKTSSECAVCLSEFQEDETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRTSISSS 164
              SS+C+VCLSEFQE+E++R++P C+H FH+ CID WL+++ NCPLCR  I +S
Sbjct: 157 FVESSDCSVCLSEFQENESLRLLPKCNHAFHVPCIDTWLKSHSNCPLCRAFIVTS 207

[Close]

BLAST of Chy6G110100 vs. TAIR 10
Match: AT4G17905.1 (RING/U-box superfamily protein )

HSP 1 Score: 96.7 bits (239), Expect = 3.7e-20
Identity = 55/149 (36.91%), Postives = 80/149 (53.69%), Query Frame = 0


Query: 22  SHSSFPIIAIAIIGILVTAFLLLSYYVFVINCCLN---------WHRFDLIRRLSPSSTR 81
           S+ +   + IAI GI  TAFLL +YY  V   C N           R D+I  ++     
Sbjct: 54  SNPNLSPLVIAIFGIFATAFLLAAYYTLVSKYCANDTTNEAASESGRSDIILDVNSPERG 113

Query: 82  PLPSPTAYSPALETRGLDESVIRSIPLLHYNKSMANQK-TSSECAVCLSEFQEDETVRII 141
               P A   +  T GLD+++I+ I      K     K   ++C++CL EF EDE++R++
Sbjct: 114 DQDDPFALESS--TAGLDDTLIKKIGFFKLKKHQNGFKINGTDCSICLGEFNEDESLRLL 173

Query: 142 PICSHLFHIDCIDIWLQNNPNCPLCRTSI 161
           P C+H FH+ CID WL+++ NCPLCR  I
Sbjct: 174 PKCNHTFHVVCIDRWLKSHSNCPLCRAKI 200

The following BLAST results are available for this feature:

BLAST of Chy6G110100 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LSW9	8.2e-73	49.58	RING-H2 finger protein ATL16 OS=Arabidopsis thaliana OX=3702 GN=ATL16 PE=2 SV=1	[more]
P93823	6.3e-65	46.65	RING-H2 finger protein ATL1 OS=Arabidopsis thaliana OX=3702 GN=ATL1 PE=2 SV=1	[more]
Q9LF64	6.0e-23	31.25	RING-H2 finger protein ATL52 OS=Arabidopsis thaliana OX=3702 GN=ATL52 PE=2 SV=1	[more]
Q9SRQ8	6.6e-22	39.43	RING-H2 finger protein ATL51 OS=Arabidopsis thaliana OX=3702 GN=ATL51 PE=2 SV=2	[more]
Q7XLY8	3.4e-18	28.30	E3 ubiquitin-protein ligase Os04g0590900 OS=Oryza sativa subsp. japonica OX=3994...	[more]

BLAST of Chy6G110100 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L8B0	3.5e-175	95.34	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G135640 P...	[more]
A0A5D3D010	1.9e-173	94.72	RING-H2 finger protein ATL16 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A1S3AWQ9	1.9e-173	94.72	RING-H2 finger protein ATL16 OS=Cucumis melo OX=3656 GN=LOC103483603 PE=4 SV=1	[more]
A0A6J1IJC3	3.0e-142	79.82	RING-H2 finger protein ATL16-like OS=Cucurbita maxima OX=3661 GN=LOC111474033 PE...	[more]
A0A6J1FW76	2.1e-140	79.20	RING-H2 finger protein ATL16 OS=Cucurbita moschata OX=3662 GN=LOC111447447 PE=4 ...	[more]

BLAST of Chy6G110100 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004134414.1	8.90e-225	95.34	RING-H2 finger protein ATL16 [Cucumis sativus]	[more]
XP_008438538.1	1.72e-222	94.72	PREDICTED: RING-H2 finger protein ATL16 [Cucumis melo] >KAA0049260.1 RING-H2 fin...	[more]
XP_038877360.1	1.30e-204	88.00	RING-H2 finger protein ATL16 [Benincasa hispida]	[more]
XP_022975064.1	2.44e-181	79.82	RING-H2 finger protein ATL16-like [Cucurbita maxima]	[more]
XP_022942390.1	6.66e-179	79.20	RING-H2 finger protein ATL16 [Cucurbita moschata]	[more]

BLAST of Chy6G110100 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G43420.1	5.8e-74	49.58	RING/U-box superfamily protein	[more]
AT1G04360.1	4.5e-66	46.65	RING/U-box superfamily protein	[more]
AT5G17600.1	4.2e-24	31.25	RING/U-box superfamily protein	[more]
AT3G03550.1	4.7e-23	39.43	RING/U-box superfamily protein	[more]
AT4G17905.1	3.7e-20	36.91	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 115..156 e-value: 1.1E-6 score: 38.3
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 114..157 e-value: 1.5E-12 score: 47.6
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 115..157 score: 12.459772
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 79..163 e-value: 1.9E-23 score: 83.9
None	No IPR available	PANTHER	PTHR46913:SF1	RING-H2 FINGER PROTEIN ATL16	coord: 11..319
None	No IPR available	CDD	cd16454	RING-H2_PA-TM-RING	coord: 114..157 e-value: 1.03514E-17 score: 73.4901
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 94..166
IPR044600	RING-H2 finger protein ATL1/ATL16	PANTHER	PTHR46913	RING-H2 FINGER PROTEIN ATL16	coord: 11..319

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy6G110100.1	Chy6G110100.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0016740	transferase activity