Chy6G109880 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTATTTCACTTCTTCCTTTTCGCTTCTACGCTTTGATCTGGTTCGTTTTTACATTGATCTCACTTCTCCTCTCTGTTTTATCCCTGCATTTCCGAAAGCTAGATTGAATTGAAGCATGTGTTTGTCAGATTAGAAAACTGGACTGTTTTCAGCTTAATTTAAGTAGTGATTACCTTGATATTGATCAACTGCAGTTTTTTTTTTTATCGTTTTATATTGTTTTTGCCATGTTGAATTGTTTTGTTGTTTTTCTGTTAATCTGCTGGAGGAATCCGTCGGAATTTAGTAATTTCTGAATGTTTGATCTCTTTGTGGGATTCACGCATTTGTTTCCATGCAGCAAAGCATAAAAATGGAGGGAACTGTGTTCACCCCTGCCTTGGAAGGAATTCAGCATGTCAAATCTGAAGCCGGGGAGATTTTGACCAAGCCATTCTTGGAAGCCTGCAAACATATTCTGCCTGTTATTGGTGCAGCTCCCTGATCCATTTCGTCTTTTAAAAACTTGTCTATAGTTTCTTTGCGTCTGGATACATATGATTTCATTTTGAGTAAACAGAAACGTCAATTGAATTATGTTTTCTTTGTTGGTGGACTGAAGTACTAGATTTGTCTTTTTAAGGTTTCTGTAACCTTTAAATTCAGTTGATTTTTATATCATAACTGAACTCCTACTGAAACTAAGCAAAAATAGTTGCAATCTCATAATCCGGTTACCACAAATTGTCATTCTCAAAACTAATGTCTAACTTTTAATGCAGACAAGTTTGGAGCTGCTATGGCACTTGTTAAAAATGACATTGGAGGGAACATATCGGTAAGTTTCACGTCATAATTTTTCCAATTCATTATGTAAGAAATAAGTTTATAGAATATCATTGTCTATTGAGGCCAGTTTATGGCAGCCTATTGTCCATGAGCCCATTTCTTTAGGCATTTGTTTACTTAATTATATATGTCTATCTTGTTTTTTAATTTGTAGGCCAATAATCCTTATAACTGGACATAGGACTAGCTTATTTATTTATTATTTGGCAAATAAGATTGGAGTAAACAAGTAACGTACCTGAAAAAAGTAGTGAAAGGAAAATGTGTTGTACCTGAAAAGATAAAACGTGCATCCAACTTGCATACTTATGGGAAACACTTGTCATTTGTGATATACAGCTGCAAGTGTTTTTTGTGCTCTTGAAAGGGAGACAGATGCATGCCTTTCCAGTTCGCAAGTTTTTGACATCAAATCATGCCTGTGCTTTTGTTATAGATTCTGTAGCGGTTATGTTTTATTCACCTTACTGTTTGTATCTGTAGAGATTGGAGACCAAGTATTCTAGCAACCCAGCTGGATTCAACTACTTGTATAACTTGGTGAAACCTGAGATTGAAACTAAAACTGCAAAAGGATCATCCAGTTGCACAAATGGTCTTCTTTGGTTGACAAGGTTGGACAATGTCTGCAGTGAATTGGTTTTTTCATTTTGGTTCTGGTGCTTGTGTTGAATGTTAAATAAGTTTTTGAACATAAGCAGGTAAAAGTTTAACTTTGTTTGCCATTAAAGGCTACAGAACTAAAATCTAATTGGTGAGGAAGTTCACGCCATCTTCCATGAGATACTTTAAAGTGATTATCAAAATGATGCAAATAATTTTCTGTCAACTGAAATGAGATATCAACTACTTCAGTCTTTTTAAGCCCCCTCTGCCTCTGGACGTGTATACTTGCGTTTTTCTTGGTTATTAACTTATTGCATTGCACATGACCTGCAAGTTAGTCTTTTCTATGTGACTCTTTGTATTTCTCAATTCAAGGAATTGTTTTTCAGTTGCAGCTTGAGTGTGAATGATTGAACCAAATTGCTCTTTTTCCTCTCTCTCTCTCTTTTTTTAAAAAAGTAATGCATAAGTCTGGGATAATACTGCAAATTTGGATCAATATGATTAATGCACACTTTGGTTCTGCTTGCATATTTTGATCCTGTTCAGAGCAATAGATTTCTTGGTAGAACTGTTTCGCAACTTACTGGAGCATCAGGATTGGGCAATGTCTCGTGCCTGTACAGAAGCCTATGGCAAGACCTTGAAAAAGTGGCATGGTTGGCTCGCCAGTTCAAGTTTCAGTGTAATCCTCTGATGCCCCCCATCAATATAATTTTGAAATTCTTTCATTCTTCGGTATACGGCGAGATTTTTGGTCAAGTTGCAGCACCCCCACCCCCATTTTCCTTTCACTTGGGCTTTTAGGAATTGAATAGAAGCTTAAAAAAGCACTGAAGTAATTAGCTAAACCCGCAAAGCATATTCCTATACTTTTATTTCTAGAAATCTGGCTGTTACAAGCTTCTTTTGGGTGTAATACTCTCATCCCTCACGATCAAGTTATAACATGGGTTCACATTTCAAAATTGTGGCAAATTTTATTAAACCTTCTGCTGCTTCAAATATAACTATAATGTTTGAATTAACTAGATGTTAGTGTAAATCATTAATCTCAATGCATGATTCGGATTATGAGACATTATATGTTGATTCTAATCGGATACCGAAATTGTAGGTTGCCATGAAGCTTGCTCCTGATCGTAAGAAGTTTATGGAAGTTATATCAGGCAATGGCAATGTTGAAGCTGATATAGAGAAATTTTGTACAAATTTTTCACCTCTCCTCCAAGAGATTCACAAGTTTCTGGTAAGATTCGCCAAATTCCTGGTGATCTGACTTAAACTATCGAACTTGATACAACTAGTTCAATTAACTGAAGTTTCTGAGGCGTCAGCAACCTAAAATTTAGCGTTGGGTTGAATCTCCAAGTCTATTTAACCTCTTACTTTTTCTTATTGAAATTGTCATCTTAAATGTCTAGCATGGCATTTTTAATATGCCTTTAACAATTGATTTCACACTTTCAAACGCGATTCTCACACTTTTTTAAAAATGAAATTCTCTCTTTTGACAGGCTAGTGTTGGCATGGATGATCTCAAGGCTTCGTGA ATGTATTTCACTTCTTCCTTTTCGCTTCTACGCTTTGATCTGCAAAGCATAAAAATGGAGGGAACTGTGTTCACCCCTGCCTTGGAAGGAATTCAGCATGTCAAATCTGAAGCCGGGGAGATTTTGACCAAGCCATTCTTGGAAGCCTGCAAACATATTCTGCCTGTTATTGACAAGTTTGGAGCTGCTATGGCACTTGTTAAAAATGACATTGGAGGGAACATATCGAGATTGGAGACCAAGTATTCTAGCAACCCAGCTGGATTCAACTACTTGTATAACTTGGTGAAACCTGAGATTGAAACTAAAACTGCAAAAGGATCATCCAGTTGCACAAATGGTCTTCTTTGGTTGACAAGAGCAATAGATTTCTTGGTAGAACTGTTTCGCAACTTACTGGAGCATCAGGATTGGGCAATGTCTCGTGCCTGTACAGAAGCCTATGGCAAGACCTTGAAAAAGTGGCATGGTTGGCTCGCCAGTTCAAGTTTCAGTGTTGCCATGAAGCTTGCTCCTGATCGTAAGAAGTTTATGGAAGTTATATCAGGCAATGGCAATGTTGAAGCTGATATAGAGAAATTTTGTACAAATTTTTCACCTCTCCTCCAAGAGATTCACAAGTTTCTGGCTAGTGTTGGCATGGATGATCTCAAGGCTTCGTGA ATGTATTTCACTTCTTCCTTTTCGCTTCTACGCTTTGATCTGCAAAGCATAAAAATGGAGGGAACTGTGTTCACCCCTGCCTTGGAAGGAATTCAGCATGTCAAATCTGAAGCCGGGGAGATTTTGACCAAGCCATTCTTGGAAGCCTGCAAACATATTCTGCCTGTTATTGACAAGTTTGGAGCTGCTATGGCACTTGTTAAAAATGACATTGGAGGGAACATATCGAGATTGGAGACCAAGTATTCTAGCAACCCAGCTGGATTCAACTACTTGTATAACTTGGTGAAACCTGAGATTGAAACTAAAACTGCAAAAGGATCATCCAGTTGCACAAATGGTCTTCTTTGGTTGACAAGAGCAATAGATTTCTTGGTAGAACTGTTTCGCAACTTACTGGAGCATCAGGATTGGGCAATGTCTCGTGCCTGTACAGAAGCCTATGGCAAGACCTTGAAAAAGTGGCATGGTTGGCTCGCCAGTTCAAGTTTCAGTGTTGCCATGAAGCTTGCTCCTGATCGTAAGAAGTTTATGGAAGTTATATCAGGCAATGGCAATGTTGAAGCTGATATAGAGAAATTTTGTACAAATTTTTCACCTCTCCTCCAAGAGATTCACAAGTTTCTGGCTAGTGTTGGCATGGATGATCTCAAGGCTTCGTGA MYFTSSFSLLRFDLQSIKMEGTVFTPALEGIQHVKSEAGEILTKPFLEACKHILPVIDKFGAAMALVKNDIGGNISRLETKYSSNPAGFNYLYNLVKPEIETKTAKGSSSCTNGLLWLTRAIDFLVELFRNLLEHQDWAMSRACTEAYGKTLKKWHGWLASSSFSVAMKLAPDRKKFMEVISGNGNVEADIEKFCTNFSPLLQEIHKFLASVGMDDLKAS* Homology
BLAST of Chy6G109880 vs. ExPASy Swiss-Prot
Match: O22797 (Glycolipid transfer protein 1 OS=Arabidopsis thaliana OX=3702 GN=GLTP1 PE=2 SV=1) HSP 1 Score: 328.9 bits (842), Expect = 4.3e-89 Identity = 151/202 (74.75%), Postives = 177/202 (87.62%), Query Frame = 0
BLAST of Chy6G109880 vs. ExPASy Swiss-Prot
Match: Q6NLQ3 (Glycolipid transfer protein 2 OS=Arabidopsis thaliana OX=3702 GN=GLTP2 PE=2 SV=1) HSP 1 Score: 136.3 bits (342), Expect = 4.1e-31 Identity = 71/189 (37.57%), Postives = 102/189 (53.97%), Query Frame = 0
BLAST of Chy6G109880 vs. ExPASy Swiss-Prot
Match: Q9LU33 (Glycolipid transfer protein 3 OS=Arabidopsis thaliana OX=3702 GN=GLTP3 PE=2 SV=1) HSP 1 Score: 136.3 bits (342), Expect = 4.1e-31 Identity = 70/207 (33.82%), Postives = 114/207 (55.07%), Query Frame = 0
BLAST of Chy6G109880 vs. ExPASy Swiss-Prot
Match: Q5U3N0 (Pleckstrin homology domain-containing family A member 8 OS=Danio rerio OX=7955 GN=plekha8 PE=2 SV=1) HSP 1 Score: 102.1 bits (253), Expect = 8.5e-21 Identity = 55/149 (36.91%), Postives = 86/149 (57.72%), Query Frame = 0
BLAST of Chy6G109880 vs. ExPASy Swiss-Prot
Match: A2BG43 (Glycolipid transfer protein OS=Danio rerio OX=7955 GN=gltp PE=3 SV=1) HSP 1 Score: 99.4 bits (246), Expect = 5.5e-20 Identity = 56/188 (29.79%), Postives = 95/188 (50.53%), Query Frame = 0
BLAST of Chy6G109880 vs. ExPASy TrEMBL
Match: A0A5A7U4N7 (Glycolipid transfer protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G001770 PE=4 SV=1) HSP 1 Score: 413.3 bits (1061), Expect = 6.4e-112 Identity = 199/203 (98.03%), Postives = 202/203 (99.51%), Query Frame = 0
BLAST of Chy6G109880 vs. ExPASy TrEMBL
Match: A0A1S3AX59 (glycolipid transfer protein 1 OS=Cucumis melo OX=3656 GN=LOC103483577 PE=4 SV=1) HSP 1 Score: 412.9 bits (1060), Expect = 8.3e-112 Identity = 199/202 (98.51%), Postives = 201/202 (99.50%), Query Frame = 0
BLAST of Chy6G109880 vs. ExPASy TrEMBL
Match: A0A0A0L888 (GLTP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G134900 PE=4 SV=1) HSP 1 Score: 411.0 bits (1055), Expect = 3.2e-111 Identity = 198/202 (98.02%), Postives = 201/202 (99.50%), Query Frame = 0
BLAST of Chy6G109880 vs. ExPASy TrEMBL
Match: A0A6J1ISS0 (glycolipid transfer protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111479622 PE=4 SV=1) HSP 1 Score: 384.8 bits (987), Expect = 2.4e-103 Identity = 182/202 (90.10%), Postives = 196/202 (97.03%), Query Frame = 0
BLAST of Chy6G109880 vs. ExPASy TrEMBL
Match: A0A6J1EA66 (glycolipid transfer protein 1 OS=Cucurbita moschata OX=3662 GN=LOC111432176 PE=4 SV=1) HSP 1 Score: 382.9 bits (982), Expect = 9.2e-103 Identity = 181/202 (89.60%), Postives = 196/202 (97.03%), Query Frame = 0
BLAST of Chy6G109880 vs. NCBI nr
Match: KAA0049236.1 (glycolipid transfer protein 1 [Cucumis melo var. makuwa] >TYK17322.1 glycolipid transfer protein 1 [Cucumis melo var. makuwa]) HSP 1 Score: 405 bits (1041), Expect = 3.78e-142 Identity = 199/203 (98.03%), Postives = 202/203 (99.51%), Query Frame = 0
BLAST of Chy6G109880 vs. NCBI nr
Match: XP_008438498.1 (PREDICTED: glycolipid transfer protein 1 [Cucumis melo]) HSP 1 Score: 405 bits (1040), Expect = 4.82e-142 Identity = 199/202 (98.51%), Postives = 201/202 (99.50%), Query Frame = 0
BLAST of Chy6G109880 vs. NCBI nr
Match: XP_011650924.1 (glycolipid transfer protein 1 [Cucumis sativus] >XP_031739441.1 glycolipid transfer protein 1 [Cucumis sativus] >KGN56842.1 hypothetical protein Csa_010945 [Cucumis sativus]) HSP 1 Score: 403 bits (1035), Expect = 2.79e-141 Identity = 198/202 (98.02%), Postives = 201/202 (99.50%), Query Frame = 0
BLAST of Chy6G109880 vs. NCBI nr
Match: XP_038878235.1 (glycolipid transfer protein 1 [Benincasa hispida]) HSP 1 Score: 385 bits (988), Expect = 4.08e-134 Identity = 189/202 (93.56%), Postives = 195/202 (96.53%), Query Frame = 0
BLAST of Chy6G109880 vs. NCBI nr
Match: KAG7018798.1 (Glycolipid transfer protein 1 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 380 bits (976), Expect = 3.41e-132 Identity = 184/206 (89.32%), Postives = 199/206 (96.60%), Query Frame = 0
BLAST of Chy6G109880 vs. TAIR 10
Match: AT2G33470.1 (glycolipid transfer protein 1 ) HSP 1 Score: 328.9 bits (842), Expect = 3.0e-90 Identity = 151/202 (74.75%), Postives = 177/202 (87.62%), Query Frame = 0
BLAST of Chy6G109880 vs. TAIR 10
Match: AT2G33470.2 (glycolipid transfer protein 1 ) HSP 1 Score: 328.9 bits (842), Expect = 3.0e-90 Identity = 151/202 (74.75%), Postives = 177/202 (87.62%), Query Frame = 0
BLAST of Chy6G109880 vs. TAIR 10
Match: AT1G21360.1 (glycolipid transfer protein 2 ) HSP 1 Score: 136.3 bits (342), Expect = 2.9e-32 Identity = 71/189 (37.57%), Postives = 102/189 (53.97%), Query Frame = 0
BLAST of Chy6G109880 vs. TAIR 10
Match: AT3G21260.3 (Glycolipid transfer protein (GLTP) family protein ) HSP 1 Score: 136.3 bits (342), Expect = 2.9e-32 Identity = 70/207 (33.82%), Postives = 114/207 (55.07%), Query Frame = 0
BLAST of Chy6G109880 vs. TAIR 10
Match: AT3G21260.2 (Glycolipid transfer protein (GLTP) family protein ) HSP 1 Score: 104.4 bits (259), Expect = 1.2e-22 Identity = 48/147 (32.65%), Postives = 82/147 (55.78%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|