Chy6G108850 (gene) Cucumber (hystrix) v1

Overview


Name	Chy6G108850
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Chromatin assembly factor 1 subunit A
Location	chrH06: 2379542 .. 2380888 (-)
RNA-Seq Expression	Chy6G108850
Synteny	Chy6G108850

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGTTTGCGTCTGGTTCCGTGATCCGCAGTGCAACCAATCTCTCTAATAACCTTTTTCGTTCCTTCTCCACTTCCATCAAAACCGCTCACCATAACAATCACCTGCAGACCCAAGAATACTTGGAGGCGAACAGCTTTATTGGTAGCTGGCAGGCGCCGAAAGACCCCAAGGAAGCGCAGGCCAGACTTGCTCGGCTCCGAAGGGAGTATGCCAAGCAGGTGAAACAGGTACGTAAGAATTACATCCAGGAGGTTGAACTCTTGAGGCTCGAAAAGGAGCAGAAGGACGAAGCCAAGAAAGAAACGCTTAGGGTTGCCAATGAGGAACGCAAGAAGCTTAAAGCTGAAGCTGCTAAAGTCCGAGCTGAAGAGCGTAAGGTTGCTGATGAAGAGTTCCGACTGACTTTGGTAAGTCATTTCCCTATCTTCTTTAACATTTACGTCGTGAGATATTATTGCTCGAAGTTTTAATTGGTAAGAATTTGGTTGGAAATGCATCCATTACTTCGAATCTATATGGATTCTGAGAGAAGTCTGTTAATTTTTCTTTTAATGATTGGAAGGAGGGAATTTTTTTGTCTCGGGTTCAATTCCTTGCTTGAATTGGTATATTTATGGTTATATGTTTTGCTGCTCTCTTGTTCTTGTCTTAACTTTCGCTAAATGTAAATAGGTGCTTTTGGTTTTCTTGGTCTCATCTCTGCTTACATACTCAACGCTTCTCTTAGTCCGACTTTGCCATTTTGGTAATTCAATAGTGGGAACTTTTAATTTGATATGCTCATTGAATGATTATGTGGTGCTTTTGAACTAAACTTGAGTCCCCAAGGGTCACAACGATGTTGAAGAGTTGCCAAAAGGTTGAGGTTCTGCTAACGAACTCTCCTATTATGTCGAGGATTTAAACCTTTGAAGTCAGGATAATACTTGTACGTGAAGTGAATGCTTTCATGCCAATTGCCTATTATTATCAAGCATATGTGTTAACTGTTCATCATATGGGGAAAATCTGGATCAAAACTTTAGTTGTGATGTTCTATATCTGAGGTCCTCAATCTTCCTTTTTCAAAAGCTTGTCAGCCGAATTTTATTCAATAGGTACCATGGTTGAGAGTTCCTTGATCATTTCCTGTTCTGGACCAAAGTTTGAGCTGTTATGTTCTATAGTGAAATGTTGAAATTACAAAATTATATGAAAAGGAAGAAAATTCCCATTCAGATAAAATACAGAAAGTTTCTCTAATTGTTTGGATTGGAGTCCATGTTATAGTCGCTGAAAAGGACAGGGTTGTCAAGAAGGCTTCTGTCGTTTTTTCTTCTCTTGAAAACGATTCTGGTGGTTGA

mRNA sequence

ATGGCGTTTGCGTCTGGTTCCGTGATCCGCAGTGCAACCAATCTCTCTAATAACCTTTTTCGTTCCTTCTCCACTTCCATCAAAACCGCTCACCATAACAATCACCTGCAGACCCAAGAATACTTGGAGGCGAACAGCTTTATTGGTAGCTGGCAGGCGCCGAAAGACCCCAAGGAAGCGCAGGCCAGACTTGCTCGGCTCCGAAGGGAGTATGCCAAGCAGGTGAAACAGGTACGTAAGAATTACATCCAGGAGGTTGAACTCTTGAGGCTCGAAAAGGAGCAGAAGGACGAAGCCAAGAAAGAAACGCTTAGGGTTGCCAATGAGGAACGCAAGAAGCTTAAAGCTGAAGCTGCTAAAGTCCGAGCTGAAGAGCGTAAGGTTGCTGATGAAGAGTTCCGACTGACTTTGGTGCTTTTGGTTTTCTTGGTCTCATCTCTGCTTACATACTCAACGCTTCTCTTAGTCCGACTTTGCCATTTTGTCGCTGAAAAGGACAGGGTTGTCAAGAAGGCTTCTGTCGTTTTTTCTTCTCTTGAAAACGATTCTGGTGGTTGA

Coding sequence (CDS)

ATGGCGTTTGCGTCTGGTTCCGTGATCCGCAGTGCAACCAATCTCTCTAATAACCTTTTTCGTTCCTTCTCCACTTCCATCAAAACCGCTCACCATAACAATCACCTGCAGACCCAAGAATACTTGGAGGCGAACAGCTTTATTGGTAGCTGGCAGGCGCCGAAAGACCCCAAGGAAGCGCAGGCCAGACTTGCTCGGCTCCGAAGGGAGTATGCCAAGCAGGTGAAACAGGTACGTAAGAATTACATCCAGGAGGTTGAACTCTTGAGGCTCGAAAAGGAGCAGAAGGACGAAGCCAAGAAAGAAACGCTTAGGGTTGCCAATGAGGAACGCAAGAAGCTTAAAGCTGAAGCTGCTAAAGTCCGAGCTGAAGAGCGTAAGGTTGCTGATGAAGAGTTCCGACTGACTTTGGTGCTTTTGGTTTTCTTGGTCTCATCTCTGCTTACATACTCAACGCTTCTCTTAGTCCGACTTTGCCATTTTGTCGCTGAAAAGGACAGGGTTGTCAAGAAGGCTTCTGTCGTTTTTTCTTCTCTTGAAAACGATTCTGGTGGTTGA

Protein sequence

MAFASGSVIRSATNLSNNLFRSFSTSIKTAHHNNHLQTQEYLEANSFIGSWQAPKDPKEAQARLARLRREYAKQVKQVRKNYIQEVELLRLEKEQKDEAKKETLRVANEERKKLKAEAAKVRAEERKVADEEFRLTLVLLVFLVSSLLTYSTLLLVRLCHFVAEKDRVVKKASVVFSSLENDSGG*

Homology

[Close]

BLAST of Chy6G108850 vs. ExPASy TrEMBL
Match: A0A5D3D385 (Chromatin assembly factor 1 subunit A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G002780 PE=4 SV=1)

HSP 1 Score: 259.2 bits (661), Expect = 1.3e-65
Identity = 152/180 (84.44%), Postives = 158/180 (87.78%), Query Frame = 0


Query: 1   MAFASGSVIRSATNLSNNLFRSFSTSIKTAHHNNHLQTQEYLEANSFIGSWQAPKDPKEA 60
           MAFASGSVIR+ATNLSNNL RSFSTSIK+AH+NNHLQT EYLEANSFIGSWQAPKDPKEA
Sbjct: 1   MAFASGSVIRNATNLSNNLLRSFSTSIKSAHNNNHLQTHEYLEANSFIGSWQAPKDPKEA 60

Query: 61  QARLARLRREYAKQVKQVRKNYIQEVELLRLEKEQKDEAKKETLRVANEERKKLKAEAAK 120
           QARLARLRREYAKQVKQVRKNYIQEVELLRLEKEQKDEAK+E LRVANEERKKLKAEAAK
Sbjct: 61  QARLARLRREYAKQVKQVRKNYIQEVELLRLEKEQKDEAKREALRVANEERKKLKAEAAK 120

Query: 121 VRAEERKVADEEFRLTL------------------VLLVFLVSSLLTYSTLLLVRLCHFV 163
           VRAEERK+ADEEFRLTL                  VLL+FLVSSLLTYS LLLVRLCHFV
Sbjct: 121 VRAEERKIADEEFRLTLMLILLLSCSCLNFAKCKWVLLIFLVSSLLTYSMLLLVRLCHFV 180

[Close]

BLAST of Chy6G108850 vs. ExPASy TrEMBL
Match: A0A0A0L7X4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G130330 PE=4 SV=1)

HSP 1 Score: 235.3 bits (599), Expect = 2.0e-58
Identity = 132/138 (95.65%), Postives = 135/138 (97.83%), Query Frame = 0


Query: 1   MAFASGSVIRSATNLSNNLFRSFSTSIKTAHHNNHLQTQEYLEANSFIGSWQAPKDPKEA 60
           MAFASGSVIR+ATNLSNNL RSFSTSIKTA HNNHLQTQEYLEANSFIGSWQAPK+PKEA
Sbjct: 1   MAFASGSVIRNATNLSNNLLRSFSTSIKTAQHNNHLQTQEYLEANSFIGSWQAPKNPKEA 60

Query: 61  QARLARLRREYAKQVKQVRKNYIQEVELLRLEKEQKDEAKKETLRVANEERKKLKAEAAK 120
           QARLARLRREYAKQVKQVRKNYIQEVELLRLE+EQKDEAKKE LRVANEERKKLKAEAAK
Sbjct: 61  QARLARLRREYAKQVKQVRKNYIQEVELLRLEREQKDEAKKEALRVANEERKKLKAEAAK 120

Query: 121 VRAEERKVADEEFRLTLV 139
           VRAEERKVADEEFRLTLV
Sbjct: 121 VRAEERKVADEEFRLTLV 138

[Close]

BLAST of Chy6G108850 vs. ExPASy TrEMBL
Match: A0A5A7U662 (Chromatin assembly factor 1 subunit A OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold171G003780 PE=4 SV=1)

HSP 1 Score: 232.6 bits (592), Expect = 1.3e-57
Identity = 129/137 (94.16%), Postives = 134/137 (97.81%), Query Frame = 0


Query: 1   MAFASGSVIRSATNLSNNLFRSFSTSIKTAHHNNHLQTQEYLEANSFIGSWQAPKDPKEA 60
           MAFASGSVIR+ATNLSNNL RSFSTSIK+AH+NNHLQT EYLEANSFIGSWQAPKDPKEA
Sbjct: 1   MAFASGSVIRNATNLSNNLLRSFSTSIKSAHNNNHLQTHEYLEANSFIGSWQAPKDPKEA 60

Query: 61  QARLARLRREYAKQVKQVRKNYIQEVELLRLEKEQKDEAKKETLRVANEERKKLKAEAAK 120
           QARLARLRREYAKQVKQVRKNYIQEVELLRLEKEQKDEAK+E LRVANEERKKLKAEAAK
Sbjct: 61  QARLARLRREYAKQVKQVRKNYIQEVELLRLEKEQKDEAKREALRVANEERKKLKAEAAK 120

Query: 121 VRAEERKVADEEFRLTL 138
           VRAEERK+ADEEFRLTL
Sbjct: 121 VRAEERKIADEEFRLTL 137

[Close]

BLAST of Chy6G108850 vs. ExPASy TrEMBL
Match: A0A1S3AWS6 (LOW QUALITY PROTEIN: chromatin assembly factor 1 subunit A OS=Cucumis melo OX=3656 GN=LOC103483476 PE=4 SV=1)

HSP 1 Score: 232.6 bits (592), Expect = 1.3e-57
Identity = 129/138 (93.48%), Postives = 135/138 (97.83%), Query Frame = 0


Query: 1   MAFASGSVIRSATNLSNNLFRSFSTSIKTAHHNNHLQTQEYLEANSFIGSWQAPKDPKEA 60
           MAFASGSVIR+ATNLSNNL RSFSTSIK+AH+NNHLQT EYLEANSFIGSWQAPKDPKEA
Sbjct: 1   MAFASGSVIRNATNLSNNLLRSFSTSIKSAHNNNHLQTHEYLEANSFIGSWQAPKDPKEA 60

Query: 61  QARLARLRREYAKQVKQVRKNYIQEVELLRLEKEQKDEAKKETLRVANEERKKLKAEAAK 120
           QARLARLRREYAKQVKQVRKNYIQEVELLRLEKEQKDEAK+E LRVANEERKKLKAEAAK
Sbjct: 61  QARLARLRREYAKQVKQVRKNYIQEVELLRLEKEQKDEAKREALRVANEERKKLKAEAAK 120

Query: 121 VRAEERKVADEEFRLTLV 139
           VRAEERK+ADEEFRLTL+
Sbjct: 121 VRAEERKIADEEFRLTLM 138

[Close]

BLAST of Chy6G108850 vs. ExPASy TrEMBL
Match: A0A6J1IZ92 (uncharacterized protein LOC111479798 OS=Cucurbita maxima OX=3661 GN=LOC111479798 PE=4 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 3.4e-50
Identity = 115/138 (83.33%), Postives = 126/138 (91.30%), Query Frame = 0


Query: 1   MAFASGSVIRSATNLSNNLFRSFSTSIKTAHHNNHLQTQEYLEANSFIGSWQAPKDPKEA 60
           MA  S S IRSATNLSNNL RSFSTSIK+AHHNNH QT +YLEA++F+GSW+APKDPKEA
Sbjct: 1   MALTSRSAIRSATNLSNNLLRSFSTSIKSAHHNNHQQTHKYLEASAFVGSWEAPKDPKEA 60

Query: 61  QARLARLRREYAKQVKQVRKNYIQEVELLRLEKEQKDEAKKETLRVANEERKKLKAEAAK 120
           QA+LA LRR+YAKQVKQVRKNYIQEVELLRLEK+ KDEAK+E LRVANEERKKLKAEAAK
Sbjct: 61  QAKLALLRRDYAKQVKQVRKNYIQEVELLRLEKQSKDEAKREALRVANEERKKLKAEAAK 120

Query: 121 VRAEERKVADEEFRLTLV 139
            RAEERKVADEEFR TL+
Sbjct: 121 ARAEERKVADEEFRRTLM 138

[Close]

BLAST of Chy6G108850 vs. NCBI nr
Match: TYK17416.1 (chromatin assembly factor 1 subunit A [Cucumis melo var. makuwa])

HSP 1 Score: 259 bits (661), Expect = 8.26e-85
Identity = 153/189 (80.95%), Postives = 162/189 (85.71%), Query Frame = 0


Query: 1   MAFASGSVIRSATNLSNNLFRSFSTSIKTAHHNNHLQTQEYLEANSFIGSWQAPKDPKEA 60
           MAFASGSVIR+ATNLSNNL RSFSTSIK+AH+NNHLQT EYLEANSFIGSWQAPKDPKEA
Sbjct: 1   MAFASGSVIRNATNLSNNLLRSFSTSIKSAHNNNHLQTHEYLEANSFIGSWQAPKDPKEA 60

Query: 61  QARLARLRREYAKQVKQVRKNYIQEVELLRLEKEQKDEAKKETLRVANEERKKLKAEAAK 120
           QARLARLRREYAKQVKQVRKNYIQEVELLRLEKEQKDEAK+E LRVANEERKKLKAEAAK
Sbjct: 61  QARLARLRREYAKQVKQVRKNYIQEVELLRLEKEQKDEAKREALRVANEERKKLKAEAAK 120

Query: 121 VRAEERKVADEEFRLTL------------------VLLVFLVSSLLTYSTLLLVRLCHFV 171
           VRAEERK+ADEEFRLTL                  VLL+FLVSSLLTYS LLLVRLCHFV
Sbjct: 121 VRAEERKIADEEFRLTLMLILLLSCSCLNFAKCKWVLLIFLVSSLLTYSMLLLVRLCHFV 180

[Close]

BLAST of Chy6G108850 vs. NCBI nr
Match: KAE8650295.1 (hypothetical protein Csa_010436 [Cucumis sativus])

HSP 1 Score: 233 bits (594), Expect = 2.26e-75
Identity = 132/138 (95.65%), Postives = 135/138 (97.83%), Query Frame = 0


Query: 1   MAFASGSVIRSATNLSNNLFRSFSTSIKTAHHNNHLQTQEYLEANSFIGSWQAPKDPKEA 60
           MAFASGSVIR+ATNLSNNL RSFSTSIKTA HNNHLQTQEYLEANSFIGSWQAPK+PKEA
Sbjct: 1   MAFASGSVIRNATNLSNNLLRSFSTSIKTAQHNNHLQTQEYLEANSFIGSWQAPKNPKEA 60

Query: 61  QARLARLRREYAKQVKQVRKNYIQEVELLRLEKEQKDEAKKETLRVANEERKKLKAEAAK 120
           QARLARLRREYAKQVKQVRKNYIQEVELLRLE+EQKDEAKKE LRVANEERKKLKAEAAK
Sbjct: 61  QARLARLRREYAKQVKQVRKNYIQEVELLRLEREQKDEAKKEALRVANEERKKLKAEAAK 120

Query: 121 VRAEERKVADEEFRLTLV 138
           VRAEERKVADEEFRLTLV
Sbjct: 121 VRAEERKVADEEFRLTLV 138

[Close]

BLAST of Chy6G108850 vs. NCBI nr
Match: XP_004133989.1 (chromatin assembly factor 1 subunit A [Cucumis sativus])

HSP 1 Score: 233 bits (594), Expect = 7.51e-75
Identity = 132/138 (95.65%), Postives = 135/138 (97.83%), Query Frame = 0


Query: 1   MAFASGSVIRSATNLSNNLFRSFSTSIKTAHHNNHLQTQEYLEANSFIGSWQAPKDPKEA 60
           MAFASGSVIR+ATNLSNNL RSFSTSIKTA HNNHLQTQEYLEANSFIGSWQAPK+PKEA
Sbjct: 1   MAFASGSVIRNATNLSNNLLRSFSTSIKTAQHNNHLQTQEYLEANSFIGSWQAPKNPKEA 60

Query: 61  QARLARLRREYAKQVKQVRKNYIQEVELLRLEKEQKDEAKKETLRVANEERKKLKAEAAK 120
           QARLARLRREYAKQVKQVRKNYIQEVELLRLE+EQKDEAKKE LRVANEERKKLKAEAAK
Sbjct: 61  QARLARLRREYAKQVKQVRKNYIQEVELLRLEREQKDEAKKEALRVANEERKKLKAEAAK 120

Query: 121 VRAEERKVADEEFRLTLV 138
           VRAEERKVADEEFRLTLV
Sbjct: 121 VRAEERKVADEEFRLTLV 138

[Close]

BLAST of Chy6G108850 vs. NCBI nr
Match: KAA0049145.1 (chromatin assembly factor 1 subunit A [Cucumis melo var. makuwa])

HSP 1 Score: 230 bits (587), Expect = 3.32e-74
Identity = 129/137 (94.16%), Postives = 134/137 (97.81%), Query Frame = 0


Query: 1   MAFASGSVIRSATNLSNNLFRSFSTSIKTAHHNNHLQTQEYLEANSFIGSWQAPKDPKEA 60
           MAFASGSVIR+ATNLSNNL RSFSTSIK+AH+NNHLQT EYLEANSFIGSWQAPKDPKEA
Sbjct: 1   MAFASGSVIRNATNLSNNLLRSFSTSIKSAHNNNHLQTHEYLEANSFIGSWQAPKDPKEA 60

Query: 61  QARLARLRREYAKQVKQVRKNYIQEVELLRLEKEQKDEAKKETLRVANEERKKLKAEAAK 120
           QARLARLRREYAKQVKQVRKNYIQEVELLRLEKEQKDEAK+E LRVANEERKKLKAEAAK
Sbjct: 61  QARLARLRREYAKQVKQVRKNYIQEVELLRLEKEQKDEAKREALRVANEERKKLKAEAAK 120

Query: 121 VRAEERKVADEEFRLTL 137
           VRAEERK+ADEEFRLTL
Sbjct: 121 VRAEERKIADEEFRLTL 137

[Close]

BLAST of Chy6G108850 vs. NCBI nr
Match: XP_008438350.1 (PREDICTED: LOW QUALITY PROTEIN: chromatin assembly factor 1 subunit A [Cucumis melo])

HSP 1 Score: 230 bits (587), Expect = 8.71e-74
Identity = 129/137 (94.16%), Postives = 134/137 (97.81%), Query Frame = 0


Query: 1   MAFASGSVIRSATNLSNNLFRSFSTSIKTAHHNNHLQTQEYLEANSFIGSWQAPKDPKEA 60
           MAFASGSVIR+ATNLSNNL RSFSTSIK+AH+NNHLQT EYLEANSFIGSWQAPKDPKEA
Sbjct: 1   MAFASGSVIRNATNLSNNLLRSFSTSIKSAHNNNHLQTHEYLEANSFIGSWQAPKDPKEA 60

Query: 61  QARLARLRREYAKQVKQVRKNYIQEVELLRLEKEQKDEAKKETLRVANEERKKLKAEAAK 120
           QARLARLRREYAKQVKQVRKNYIQEVELLRLEKEQKDEAK+E LRVANEERKKLKAEAAK
Sbjct: 61  QARLARLRREYAKQVKQVRKNYIQEVELLRLEKEQKDEAKREALRVANEERKKLKAEAAK 120

Query: 121 VRAEERKVADEEFRLTL 137
           VRAEERK+ADEEFRLTL
Sbjct: 121 VRAEERKIADEEFRLTL 137

[Close]

BLAST of Chy6G108850 vs. TAIR 10
Match: AT5G49210.1 (unknown protein; Has 3675 Blast hits to 2315 proteins in 312 species: Archae - 2; Bacteria - 342; Metazoa - 1190; Fungi - 281; Plants - 114; Viruses - 4; Other Eukaryotes - 1742 (source: NCBI BLink). )

HSP 1 Score: 127.1 bits (318), Expect = 1.5e-29
Identity = 71/118 (60.17%), Postives = 91/118 (77.12%), Query Frame = 0


Query: 21  RSFSTSIKTAHHNNHLQTQEYLEANSFIGSWQAPKDPKEAQARLARLRREYAKQVKQVRK 80
           RSFS      HH  H +T  +LE   +IGSW+AP DPK+A+ +LA+LRR+YAK+V+  RK
Sbjct: 25  RSFSAD--ATHHRFHQETHNFLEPEYYIGSWEAPSDPKDAERKLAQLRRDYAKKVRVYRK 84

Query: 81  NYIQEVELLRLEKEQKDEAKKETLRVANEERKKLKAEAAKVRAEERKVADEEFRLTLV 139
            YI E+E+LR+EK++KDEA+    R ANEER+ LKAEAAKVRAEERK+ADEEFR TL+
Sbjct: 85  EYIHEIEMLRVEKQRKDEARLLAERAANEERRLLKAEAAKVRAEERKIADEEFRQTLI 140

[Close]

BLAST of Chy6G108850 vs. TAIR 10
Match: AT5G49210.2 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 127.1 bits (318), Expect = 1.5e-29
Identity = 71/118 (60.17%), Postives = 91/118 (77.12%), Query Frame = 0


Query: 21  RSFSTSIKTAHHNNHLQTQEYLEANSFIGSWQAPKDPKEAQARLARLRREYAKQVKQVRK 80
           RSFS      HH  H +T  +LE   +IGSW+AP DPK+A+ +LA+LRR+YAK+V+  RK
Sbjct: 25  RSFSAD--ATHHRFHQETHNFLEPEYYIGSWEAPSDPKDAERKLAQLRRDYAKKVRVYRK 84

Query: 81  NYIQEVELLRLEKEQKDEAKKETLRVANEERKKLKAEAAKVRAEERKVADEEFRLTLV 139
            YI E+E+LR+EK++KDEA+    R ANEER+ LKAEAAKVRAEERK+ADEEFR TL+
Sbjct: 85  EYIHEIEMLRVEKQRKDEARLLAERAANEERRLLKAEAAKVRAEERKIADEEFRQTLI 140

The following BLAST results are available for this feature:

BLAST of Chy6G108850 vs.


Match Name	E-value	Identity	Description

BLAST of Chy6G108850 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3D385	1.3e-65	84.44	Chromatin assembly factor 1 subunit A OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A0A0L7X4	2.0e-58	95.65	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G130330 PE=4 SV=1	[more]
A0A5A7U662	1.3e-57	94.16	Chromatin assembly factor 1 subunit A OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A1S3AWS6	1.3e-57	93.48	LOW QUALITY PROTEIN: chromatin assembly factor 1 subunit A OS=Cucumis melo OX=36...	[more]
A0A6J1IZ92	3.4e-50	83.33	uncharacterized protein LOC111479798 OS=Cucurbita maxima OX=3661 GN=LOC111479798...	[more]

BLAST of Chy6G108850 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK17416.1	8.26e-85	80.95	chromatin assembly factor 1 subunit A [Cucumis melo var. makuwa]	[more]
KAE8650295.1	2.26e-75	95.65	hypothetical protein Csa_010436 [Cucumis sativus]	[more]
XP_004133989.1	7.51e-75	95.65	chromatin assembly factor 1 subunit A [Cucumis sativus]	[more]
KAA0049145.1	3.32e-74	94.16	chromatin assembly factor 1 subunit A [Cucumis melo var. makuwa]	[more]
XP_008438350.1	8.71e-74	94.16	PREDICTED: LOW QUALITY PROTEIN: chromatin assembly factor 1 subunit A [Cucumis m...	[more]

BLAST of Chy6G108850 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G49210.1	1.5e-29	60.17	unknown protein; Has 3675 Blast hits to 2315 proteins in 312 species: Archae - 2...	[more]
AT5G49210.2	1.5e-29	60.17	unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae -...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 72..131
None	No IPR available	PANTHER	PTHR36402	EXPRESSED PROTEIN	coord: 11..138

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy6G108850.1	Chy6G108850.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane