|
|
Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. ATGGATTTTGAAGCTGGAGATCGAAGAAGGAACGAATCGGATCGGAAAGCGAATGGAAATGAAACGGAGGGAAAAAAGAGAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAGGGAATGTGGGAATTGGGAGCGCTAAGTGGCAAACGGTGAGTCCGTTACATTTTTGTTTTCTTTTTCTTTTTATTATCATTATTATTATTATTATTATTATTATTATTATTATTATTATTATCATTATCATTATTATTAAATGGTTTTTTTAATTTGATAAACAAGAAAAATATTGTCCACAATTTAAAACTTCCGCCACCGAATCCCGCGTTTCTTTTGCAGTTACGTCTTGCTATCTTTGTTATTTATTACAACGAAACTGAAAGAAATTACGACGTCGTTTCGTTTCTCTCTATAATCTGGGTGGGAATTCAAACTTCCTCTACAAGTTAA mRNA sequence ATGGATTTTGAAGCTGGAGATCGAAGAAGGAACGAATCGGATCGGAAAGCGAATGGAAATGAAACGGAGGGAAAAAAGAGAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAGGGAATGTGGGAATTGGGAGCGCTAAGTGGCAAACGTTACGTCTTGCTATCTTTGTTATTTATTACAACGAAACTGAAAGAAATTACGACGTCGTTTCGTTTCTCTCTATAATCTGGGTGGGAATTCAAACTTCCTCTACAAGTTAA Coding sequence (CDS) ATGGATTTTGAAGCTGGAGATCGAAGAAGGAACGAATCGGATCGGAAAGCGAATGGAAATGAAACGGAGGGAAAAAAGAGAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAGGGAATGTGGGAATTGGGAGCGCTAAGTGGCAAACGTTACGTCTTGCTATCTTTGTTATTTATTACAACGAAACTGAAAGAAATTACGACGTCGTTTCGTTTCTCTCTATAATCTGGGTGGGAATTCAAACTTCCTCTACAAGTTAA Protein sequence MDFEAGDRRRNESDRKANGNETEGKKRRERERERERERECGNWER*VANVTSCYLCYLLQRN*KKLRRRFVSLYNLGGNSNFLYKLX
Homology
BLAST of Chy6G108770 vs. ExPASy TrEMBL
Match: A0A0A0L7W6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G129740 PE=4 SV=1) HSP 1 Score: 55.8 bits (133), Expect = 1.0e-04 Identity = 30/32 (93.75%), Postives = 32/32 (100.00%), Query Frame = 0
Query: 1 MDFEAGDRRRNESDRKANGNETEGKKRRERER 33
MDFEAGDRRRNESDRKANGNETEGK+RRERE+
Sbjct: 1 MDFEAGDRRRNESDRKANGNETEGKRRREREK 32
BLAST of Chy6G108770 vs. NCBI nr
Match: KGN56717.1 (hypothetical protein Csa_011736 [Cucumis sativus]) HSP 1 Score: 55.8 bits (133), Expect = 6.24e-08 Identity = 30/32 (93.75%), Postives = 32/32 (100.00%), Query Frame = 0
Query: 1 MDFEAGDRRRNESDRKANGNETEGKKRRERER 32
MDFEAGDRRRNESDRKANGNETEGK+RRERE+
Sbjct: 1 MDFEAGDRRRNESDRKANGNETEGKRRREREK 32
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0L7W6 | 1.0e-04 | 93.75 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G129740 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| KGN56717.1 | 6.24e-08 | 93.75 | hypothetical protein Csa_011736 [Cucumis sativus] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1..38 |
Relationships
The following mRNA feature(s) are a part of this gene:
|
