Chy6G108690 (gene) Cucumber (hystrix) v1

Overview


Name	Chy6G108690
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	protein RALF-like 24
Location	chrH06: 2261963 .. 2264834 (+)
RNA-Seq Expression	Chy6G108690
Synteny	Chy6G108690

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGTAATGGCAAAAGGGGTTTGCAATCAGAAGATCGGTGAGTGTTTGACTGACCCACAAATGGAATCAGAAATCAGTAGAAGAGTTCTGATGATGCAGAAGAAGTATATAAGCTATGATACACTTAGAAGGGACATGGTTCCTTGTTCAAGACCAGGTGTTTCGTATTATGAATGTCATCCTGGTCCAGCAAATTCTTATGACAGAGGCTGTGAAGTCATTACTAGATGTGCCAGAGATGTTCACGACATAAACACTTGATGATGATAATGATGATGGATGGATGGATGGGATGCCACTGGTAAGGTGAGAAGTATAGTTGGTATTTAGTATTTACTTTGATTTTTAGAATGTGCCATAAGGCTACATTTTGGGTTTTAATGGCTGTTCTAATTTGGTGCATTGTTGACTTTCTTGAGAGATCTGTGGAGAAAACCCTTGAGATTTGACTCTGCTCTCTGATTTTGGGGACTTGTCTTTGATTTCGTATAACAATCCTAAATTTAGCTAATTGGAACTTCATTACCGATTTTCTTCTCTTGGGTATTTAGTTGAAGAATGATTTTCTTCTCGGCTCTTCGGGTAATGTAGTTACTGGTTTATGAAGATTAAAGCGACAAGGGAAATGCTTAACTTGATTTCAAGTTGTGATAAAGGATGGGGTTGAGGAATGAAAACAGTGATCTTAGAATGTCAGATATTTTCATAGCTTTGATTCTTTTCGTGGTGTGAAGGAAGCTTAATTTATTACTTAAATAGATAACTTTAATTCGTTGGAAGAGGTAAGTATTATTTTTACTTTTTAGGATCTTGACTCTAATATCAACCAACAAATGATTTCCCCCTGGTTGTTTTTCTTCCCCTTGCACGTATGAAATTGCATCATTTCTTTGCCGGAAATGAGGATCCATTGATATAAGCAGGATATGAAGATATGAACGTGGGATATGGGGGCGTGAATGTGTTGAAGTCAGCTTGCCAATATAGAGAAGAACTAGTCATTTTGACAAAACTAAACTATTGTGAGAAAGGAAAATATTCTGTAGCCTAATTCATGGAGTGTTTGTCAAACTAGCTAGTAAAGGGAAAACTGTTGCGACAGTTTCTTTCTTTTGAGACCATGCTCACTATCTATCATATCATCAATTGGAGGCAGTTCTTCCTCCTCCAAACCGCACGTTTGCCAAATGAAAGTCGTTTGCCATACTTCTTTTTCATCATCATGTGCAACGAATGTATCTCCTCTATCATTTGTTTCATATTTTTTTCCAAAACAGGTAACCATATTCTTACTCATTCCTCCAATTTCAGCCTCAGTTGCTCCCAAATGTACCTCTGTTCACTTCTGTGTCATCTTCTTCCACCTCTCCAGGATTCATGCTCTGCTACCCCACTTGTAAGGCTACTTTTTACTATATTGTATTATTAACTTTGAGGAACATGATGACGAGGGAAAATTACCTAGCCGATTCGAGAGGGTTGGTAATCTCTTTGACAAGATCTATTTTGAGGGAGCGCTTGGAGCAAGGGCTATCCTAATTCCTAAAGCTATAATAACCATCCATTGAAAACTAGCTAAAGTCAACACTATTTCAAAACCAACACTTGCAACCGTATGAATTTTCTACCATATGTACTATTTTACATGCATCATTTTTTTATTCTTTGTTGAAGTGTTAAATATTTTATTCTCAAATTAAAAGTCGTTTACCTCTTGAACACATTCTATTATAACTCAAACTAAAATAATCTACACCTTAAACACAAACTATTATAACTACTCTTTTGCCCAATGAAAGCTAAAATAACGTACCCTCCTCATCCACGAGCAATTATTACCAACTTATCCCTATTATTCTTTCCAGTAATTAGAGGCCTTAAACACTTTTTCACGGCAATGCTTAAGAAAAAATAGGATTAAAGGTTTATCTGACAAAGATAGTAACATTTTTAGTACACCATTAGAATGCAAGTAGAGTTTTTGAACTTCAGATCTATAATTCTATGAACTCAAGGGTCATTTGTTTTCACTATTTTCAATCATGGGCACTGTTTGATCCTTTTAATATAGGTTTTTTGTGTTTTGCCAGTGAAAATTGGTTTCTTTTTTTTCGCATTTCTCTTAAATGTCTAGTATGTGATAGACTGCTGCTAGGTACAGTTTACTAGTAAGCACCAAACTGACGTTGCAGGTGAAAGTCAAAATCACCGAAAATGAAATGGTTATCAAAACCATTTTACGTATAAAATGTTGAATTAAAACTAGAAACCATATGGTTATGACCAAATTGCTCTTTACCATTTTACATACAAAATTTGAAATTCATTTCTCAACCCCAATTTTGGAAGGGTGGAGATTCTGAACTCTGTAAGTCACTTATGGAGAAATGTATTGTCCTTCTAGAGTAGCTCTTAAACCATCAGTGGTCATCGAAACTGATGAAAAGCAAAGGGCTTAACTGTGGTATAATGACCAAACCTTTAAATGTAGAAGAAATTTCATTAATTTCACAATATTGACTAAAGTTGATATGAATCCTAAAGTATAGGTGAACTAAATTGTTGTTTATTAACATTTATAGACTAAACTATTACTTACATTAAAGTATATAGGGAGATCAAAACTGTAATGTAACCCTTTTTCAACTGTCTATTGTTTATGCTTTACATTAACTTGTATACTTTTGCATCTTGATGATTGTTATTCTAAATAGTGCTGCTCTTCAACATAACTACTTGATTCTGAGAATGTAACTTTTGCAGCTCGTTGGCAGCCGTTCAACTGTTGTGCCCAGAAGCAGATATCAACTACAGGTTGTTGTTCATTGAGATCGTCAAATCGAGCAAGAAAATTTATGTGCTTTTGTAA

mRNA sequence

ATGGAGGTAATGGCAAAAGGGGTTTGCAATCAGAAGATCGGTGAGTGTTTGACTGACCCACAAATGGAATCAGAAATCAGTAGAAGAGTTCTGATGATGCAGAAGAAGTATATAAGCTATGATACACTTAGAAGGGACATGGTTCCTTGTTCAAGACCAGGATATGAAGATATGAACGTGGGATATGGGGGCGTGAATGTGTTGAAGTCAGCTTGCCAATATAGAGAAGAACTAGTAACCATATTCTTACTCATTCCTCCAATTTCAGCCTCAGTTGCTCCCAAATGTACCTCTGTTCACTTCTGTGTCATCTTCTTCCACCTCTCCAGGATTCATGCTCTGCTACCCCACTTCTCGTTGGCAGCCGTTCAACTGTTGTGCCCAGAAGCAGATATCAACTACAGGTTGTTGTTCATTGAGATCGTCAAATCGAGCAAGAAAATTTATGTGCTTTTGTAA

Coding sequence (CDS)

ATGGAGGTAATGGCAAAAGGGGTTTGCAATCAGAAGATCGGTGAGTGTTTGACTGACCCACAAATGGAATCAGAAATCAGTAGAAGAGTTCTGATGATGCAGAAGAAGTATATAAGCTATGATACACTTAGAAGGGACATGGTTCCTTGTTCAAGACCAGGATATGAAGATATGAACGTGGGATATGGGGGCGTGAATGTGTTGAAGTCAGCTTGCCAATATAGAGAAGAACTAGTAACCATATTCTTACTCATTCCTCCAATTTCAGCCTCAGTTGCTCCCAAATGTACCTCTGTTCACTTCTGTGTCATCTTCTTCCACCTCTCCAGGATTCATGCTCTGCTACCCCACTTCTCGTTGGCAGCCGTTCAACTGTTGTGCCCAGAAGCAGATATCAACTACAGGTTGTTGTTCATTGAGATCGTCAAATCGAGCAAGAAAATTTATGTGCTTTTGTAA

Protein sequence

MEVMAKGVCNQKIGECLTDPQMESEISRRVLMMQKKYISYDTLRRDMVPCSRPGYEDMNVGYGGVNVLKSACQYREELVTIFLLIPPISASVAPKCTSVHFCVIFFHLSRIHALLPHFSLAAVQLLCPEADINYRLLFIEIVKSSKKIYVLL*

Homology

[Close]

BLAST of Chy6G108690 vs. ExPASy Swiss-Prot
Match: Q9LK37 (Protein RALF-like 24 OS=Arabidopsis thaliana OX=3702 GN=RALFL24 PE=3 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 3.6e-10
Identity = 33/63 (52.38%), Postives = 39/63 (61.90%), Query Frame = 0


Query: 10  NQKIGECLTDPQMESEISRRVLMMQKKYISYDTLRRDMVPCSRPGYEDMNVGYGGVNVLK 69
           N  IGE   +  M SEISRRV+MM+K+YISY+TLRRDMVPC +PG        G  N   
Sbjct: 41  NGVIGEEEGEEMMPSEISRRVMMMRKQYISYETLRRDMVPCQKPGASYYACRSGQANAYN 100

Query: 70  SAC 73
             C
Sbjct: 101 RGC 103

[Close]

BLAST of Chy6G108690 vs. ExPASy Swiss-Prot
Match: Q2HIM9 (Protein RALF-like 31 OS=Arabidopsis thaliana OX=3702 GN=RALFL31 PE=3 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 2.3e-09
Identity = 34/71 (47.89%), Postives = 42/71 (59.15%), Query Frame = 0


Query: 2  EVMAKGVCNQKIGECLTDPQMESEISRRVLMMQKKYISYDTLRRDMVPCSRPGYEDMNVG 61
          E+ A  + N  IGE   +  M +EISRRVLM QK+YI Y+TLRRDMVPC +PG    +  
Sbjct: 30 EIDAMLIRNSIIGE--DEDLMPTEISRRVLMAQKRYIGYETLRRDMVPCQKPGASYYDCR 89

Query: 62 YGGVNVLKSAC 73
           G  N     C
Sbjct: 90 SGQANSYSRGC 98

[Close]

BLAST of Chy6G108690 vs. ExPASy Swiss-Prot
Match: Q9MA62 (Protein RALF-like 22 OS=Arabidopsis thaliana OX=3702 GN=RALFL22 PE=3 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 1.2e-05
Identity = 27/58 (46.55%), Postives = 35/58 (60.34%), Query Frame = 0


Query: 9   CNQKIGECLTDP---QMESEISRRVLMMQKKYISYDTLRRDMVPCSRPGYEDMNVGYG 64
           C   I EC+ +    + +S+ISRR+L  QKKYISY  +RR+ VPCSR G    N   G
Sbjct: 45  CTGSIAECIAEEEEMEFDSDISRRIL-AQKKYISYGAMRRNSVPCSRRGASYYNCQRG 101

[Close]

BLAST of Chy6G108690 vs. ExPASy Swiss-Prot
Match: Q9SRY3 (Protein RALF-like 1 OS=Arabidopsis thaliana OX=3702 GN=RALF1 PE=1 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 4.5e-05
Identity = 26/57 (45.61%), Postives = 36/57 (63.16%), Query Frame = 0


Query: 9   CNQKIGECL--TDPQMESEISRRVLMMQKKYISYDTLRRDMVPCSRPGYEDMNVGYG 64
           C+  I EC+   + +M+SEI+RR+L    KYISY +L+R+ VPCSR G    N   G
Sbjct: 47  CHGSIAECIGAEEEEMDSEINRRIL-ATTKYISYQSLKRNSVPCSRRGASYYNCQNG 102

[Close]

BLAST of Chy6G108690 vs. ExPASy Swiss-Prot
Match: Q945T0 (Rapid alkalinization factor OS=Nicotiana tabacum OX=4097 GN=RALF PE=1 SV=1)

HSP 1 Score: 48.9 bits (115), Expect = 5.9e-05
Identity = 25/57 (43.86%), Postives = 36/57 (63.16%), Query Frame = 0


Query: 1  MEVMAKGVCNQKIGECLTDP---QMESEISRRVLMMQKKYISYDTLRRDMVPCSRPG 55
          M   + G C   IGEC+ +    +++SE +RR+L   KKYISY  L+++ VPCSR G
Sbjct: 33 MPARSGGGCKGSIGECIAEEEEFELDSESNRRIL-ATKKYISYGALQKNSVPCSRRG 88

[Close]

BLAST of Chy6G108690 vs. ExPASy TrEMBL
Match: A0A0A0L7V8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G129640 PE=3 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 8.5e-23
Identity = 56/73 (76.71%), Postives = 58/73 (79.45%), Query Frame = 0


Query: 1   MEVMAKGVCNQKIGECLTDPQMESEISRRVLMMQKKYISYDTLRRDMVPCSRPGYEDMNV 60
           MEVMAKGVCNQKIGECLTDP+MESEISRRVLMMQKKYISYDTLRRDMVPCSRPG      
Sbjct: 41  MEVMAKGVCNQKIGECLTDPEMESEISRRVLMMQKKYISYDTLRRDMVPCSRPGVSYYEC 100

Query: 61  GYGGVNVLKSACQ 74
             G  N     C+
Sbjct: 101 HPGPANSYDRGCE 113

[Close]

BLAST of Chy6G108690 vs. ExPASy TrEMBL
Match: A0A1S3AWQ1 (protein RALF-like 24 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103483460 PE=3 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 1.9e-22
Identity = 55/73 (75.34%), Postives = 58/73 (79.45%), Query Frame = 0


Query: 1   MEVMAKGVCNQKIGECLTDPQMESEISRRVLMMQKKYISYDTLRRDMVPCSRPGYEDMNV 60
           M+VMAKGVCNQKIGECLTDP+MESEISRRVLMMQKKYISYDTLRRDMVPCSRPG      
Sbjct: 42  MDVMAKGVCNQKIGECLTDPEMESEISRRVLMMQKKYISYDTLRRDMVPCSRPGVSYYEC 101

Query: 61  GYGGVNVLKSACQ 74
             G  N     C+
Sbjct: 102 HPGPANSYDRGCE 114

[Close]

BLAST of Chy6G108690 vs. ExPASy TrEMBL
Match: A0A5D3CZU4 (Protein RALF-like 24 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G002970 PE=3 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 1.9e-22
Identity = 55/73 (75.34%), Postives = 58/73 (79.45%), Query Frame = 0


Query: 1   MEVMAKGVCNQKIGECLTDPQMESEISRRVLMMQKKYISYDTLRRDMVPCSRPGYEDMNV 60
           M+VMAKGVCNQKIGECLTDP+MESEISRRVLMMQKKYISYDTLRRDMVPCSRPG      
Sbjct: 42  MDVMAKGVCNQKIGECLTDPEMESEISRRVLMMQKKYISYDTLRRDMVPCSRPGVSYYEC 101

Query: 61  GYGGVNVLKSACQ 74
             G  N     C+
Sbjct: 102 HPGPANSYDRGCE 114

[Close]

BLAST of Chy6G108690 vs. ExPASy TrEMBL
Match: A0A1S4DSF8 (protein RALF-like 31 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103483460 PE=3 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 1.9e-22
Identity = 55/73 (75.34%), Postives = 58/73 (79.45%), Query Frame = 0


Query: 1   MEVMAKGVCNQKIGECLTDPQMESEISRRVLMMQKKYISYDTLRRDMVPCSRPGYEDMNV 60
           M+VMAKGVCNQKIGECLTDP+MESEISRRVLMMQKKYISYDTLRRDMVPCSRPG      
Sbjct: 31  MDVMAKGVCNQKIGECLTDPEMESEISRRVLMMQKKYISYDTLRRDMVPCSRPGVSYYEC 90

Query: 61  GYGGVNVLKSACQ 74
             G  N     C+
Sbjct: 91  HPGPANSYDRGCE 103

[Close]

BLAST of Chy6G108690 vs. ExPASy TrEMBL
Match: A0A6J1D019 (protein RALF-like 24 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111016050 PE=3 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 2.3e-20
Identity = 50/73 (68.49%), Postives = 57/73 (78.08%), Query Frame = 0


Query: 1   MEVMAKGVCNQKIGECLTDPQMESEISRRVLMMQKKYISYDTLRRDMVPCSRPGYEDMNV 60
           ++VMAKGVCNQKIGECLT+P+MESE SRRVLMMQKKYISYDTL+RDMVPC+RPG      
Sbjct: 40  IDVMAKGVCNQKIGECLTEPEMESETSRRVLMMQKKYISYDTLKRDMVPCTRPGVSYYEC 99

Query: 61  GYGGVNVLKSACQ 74
             G  N     C+
Sbjct: 100 HSGPANSYDRGCE 112

[Close]

BLAST of Chy6G108690 vs. NCBI nr
Match: XP_011650863.1 (protein RALF-like 24 [Cucumis sativus] >XP_011650864.1 protein RALF-like 24 [Cucumis sativus] >XP_031738606.1 protein RALF-like 24 [Cucumis sativus] >KGN56707.1 hypothetical protein Csa_009757 [Cucumis sativus])

HSP 1 Score: 115 bits (288), Expect = 7.83e-30
Identity = 56/73 (76.71%), Postives = 58/73 (79.45%), Query Frame = 0


Query: 1   MEVMAKGVCNQKIGECLTDPQMESEISRRVLMMQKKYISYDTLRRDMVPCSRPGYEDMNV 60
           MEVMAKGVCNQKIGECLTDP+MESEISRRVLMMQKKYISYDTLRRDMVPCSRPG      
Sbjct: 41  MEVMAKGVCNQKIGECLTDPEMESEISRRVLMMQKKYISYDTLRRDMVPCSRPGVSYYEC 100

Query: 61  GYGGVNVLKSACQ 73
             G  N     C+
Sbjct: 101 HPGPANSYDRGCE 113

[Close]

BLAST of Chy6G108690 vs. NCBI nr
Match: XP_016898919.1 (PREDICTED: protein RALF-like 31 isoform X2 [Cucumis melo])

HSP 1 Score: 114 bits (285), Expect = 1.66e-29
Identity = 55/73 (75.34%), Postives = 58/73 (79.45%), Query Frame = 0


Query: 1   MEVMAKGVCNQKIGECLTDPQMESEISRRVLMMQKKYISYDTLRRDMVPCSRPGYEDMNV 60
           M+VMAKGVCNQKIGECLTDP+MESEISRRVLMMQKKYISYDTLRRDMVPCSRPG      
Sbjct: 31  MDVMAKGVCNQKIGECLTDPEMESEISRRVLMMQKKYISYDTLRRDMVPCSRPGVSYYEC 90

Query: 61  GYGGVNVLKSACQ 73
             G  N     C+
Sbjct: 91  HPGPANSYDRGCE 103

[Close]

BLAST of Chy6G108690 vs. NCBI nr
Match: XP_008438316.1 (PREDICTED: protein RALF-like 24 isoform X1 [Cucumis melo] >XP_008438319.1 PREDICTED: protein RALF-like 24 isoform X1 [Cucumis melo] >TYK17433.1 protein RALF-like 24 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 114 bits (285), Expect = 2.29e-29
Identity = 55/73 (75.34%), Postives = 58/73 (79.45%), Query Frame = 0


Query: 1   MEVMAKGVCNQKIGECLTDPQMESEISRRVLMMQKKYISYDTLRRDMVPCSRPGYEDMNV 60
           M+VMAKGVCNQKIGECLTDP+MESEISRRVLMMQKKYISYDTLRRDMVPCSRPG      
Sbjct: 42  MDVMAKGVCNQKIGECLTDPEMESEISRRVLMMQKKYISYDTLRRDMVPCSRPGVSYYEC 101

Query: 61  GYGGVNVLKSACQ 73
             G  N     C+
Sbjct: 102 HPGPANSYDRGCE 114

[Close]

BLAST of Chy6G108690 vs. NCBI nr
Match: XP_038875978.1 (protein RALF-like 24 [Benincasa hispida] >XP_038875986.1 protein RALF-like 24 [Benincasa hispida] >XP_038875991.1 protein RALF-like 24 [Benincasa hispida] >XP_038876000.1 protein RALF-like 24 [Benincasa hispida] >XP_038876008.1 protein RALF-like 24 [Benincasa hispida])

HSP 1 Score: 111 bits (278), Expect = 2.48e-28
Identity = 53/73 (72.60%), Postives = 58/73 (79.45%), Query Frame = 0


Query: 1   MEVMAKGVCNQKIGECLTDPQMESEISRRVLMMQKKYISYDTLRRDMVPCSRPGYEDMNV 60
           M++MAKGVCNQKIGECLT+P+MESEISRRVLMMQKKYISYDTLRRDMVPCSRPG      
Sbjct: 40  MDLMAKGVCNQKIGECLTEPEMESEISRRVLMMQKKYISYDTLRRDMVPCSRPGVSYYEC 99

Query: 61  GYGGVNVLKSACQ 73
             G  N     C+
Sbjct: 100 HPGPANSYDRGCE 112

[Close]

BLAST of Chy6G108690 vs. NCBI nr
Match: KAG6582492.1 (Protein RALF-like 24, partial [Cucurbita argyrosperma subsp. sororia] >KAG7018876.1 Protein RALF-like 24, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 110 bits (276), Expect = 4.97e-28
Identity = 52/73 (71.23%), Postives = 58/73 (79.45%), Query Frame = 0


Query: 1   MEVMAKGVCNQKIGECLTDPQMESEISRRVLMMQKKYISYDTLRRDMVPCSRPGYEDMNV 60
           ++VMAKGVCNQKIGECLT+P+MESE+SRRVLMMQKKYISYDTLRRDMVPCSRPG      
Sbjct: 40  IDVMAKGVCNQKIGECLTEPEMESEVSRRVLMMQKKYISYDTLRRDMVPCSRPGVSYYEC 99

Query: 61  GYGGVNVLKSACQ 73
             G  N     C+
Sbjct: 100 HPGPANSYDRGCE 112

[Close]

BLAST of Chy6G108690 vs. TAIR 10
Match: AT3G23805.1 (ralf-like 24 )

HSP 1 Score: 66.2 bits (160), Expect = 2.5e-11
Identity = 33/63 (52.38%), Postives = 39/63 (61.90%), Query Frame = 0


Query: 10  NQKIGECLTDPQMESEISRRVLMMQKKYISYDTLRRDMVPCSRPGYEDMNVGYGGVNVLK 69
           N  IGE   +  M SEISRRV+MM+K+YISY+TLRRDMVPC +PG        G  N   
Sbjct: 41  NGVIGEEEGEEMMPSEISRRVMMMRKQYISYETLRRDMVPCQKPGASYYACRSGQANAYN 100

Query: 70  SAC 73
             C
Sbjct: 101 RGC 103

[Close]

BLAST of Chy6G108690 vs. TAIR 10
Match: AT4G13950.1 (ralf-like 31 )

HSP 1 Score: 63.5 bits (153), Expect = 1.6e-10
Identity = 34/71 (47.89%), Postives = 42/71 (59.15%), Query Frame = 0


Query: 2  EVMAKGVCNQKIGECLTDPQMESEISRRVLMMQKKYISYDTLRRDMVPCSRPGYEDMNVG 61
          E+ A  + N  IGE   +  M +EISRRVLM QK+YI Y+TLRRDMVPC +PG    +  
Sbjct: 30 EIDAMLIRNSIIGE--DEDLMPTEISRRVLMAQKRYIGYETLRRDMVPCQKPGASYYDCR 89

Query: 62 YGGVNVLKSAC 73
           G  N     C
Sbjct: 90 SGQANSYSRGC 98

[Close]

BLAST of Chy6G108690 vs. TAIR 10
Match: AT3G05490.1 (ralf-like 22 )

HSP 1 Score: 51.2 bits (121), Expect = 8.5e-07
Identity = 27/58 (46.55%), Postives = 35/58 (60.34%), Query Frame = 0


Query: 9   CNQKIGECLTDP---QMESEISRRVLMMQKKYISYDTLRRDMVPCSRPGYEDMNVGYG 64
           C   I EC+ +    + +S+ISRR+L  QKKYISY  +RR+ VPCSR G    N   G
Sbjct: 45  CTGSIAECIAEEEEMEFDSDISRRIL-AQKKYISYGAMRRNSVPCSRRGASYYNCQRG 101

[Close]

BLAST of Chy6G108690 vs. TAIR 10
Match: AT1G02900.1 (rapid alkalinization factor 1 )

HSP 1 Score: 49.3 bits (116), Expect = 3.2e-06
Identity = 26/57 (45.61%), Postives = 36/57 (63.16%), Query Frame = 0


Query: 9   CNQKIGECL--TDPQMESEISRRVLMMQKKYISYDTLRRDMVPCSRPGYEDMNVGYG 64
           C+  I EC+   + +M+SEI+RR+L    KYISY +L+R+ VPCSR G    N   G
Sbjct: 47  CHGSIAECIGAEEEEMDSEINRRIL-ATTKYISYQSLKRNSVPCSRRGASYYNCQNG 102

[Close]

BLAST of Chy6G108690 vs. TAIR 10
Match: AT4G15800.1 (ralf-like 33 )

HSP 1 Score: 47.8 bits (112), Expect = 9.4e-06
Identity = 28/60 (46.67%), Postives = 33/60 (55.00%), Query Frame = 0


Query: 9  CNQKIGECLTDP-----QMESEISRRVLMMQKKYISYDTLRRDMVPCSRPGYEDMNVGYG 64
          CN  I EC         +M+SEI+RR+L    KYISY  LRR+ VPCSR G    N   G
Sbjct: 40 CNGTIAECSLSTAEEEFEMDSEINRRIL-ATTKYISYGALRRNTVPCSRRGASYYNCRRG 98

The following BLAST results are available for this feature:

BLAST of Chy6G108690 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LK37	3.6e-10	52.38	Protein RALF-like 24 OS=Arabidopsis thaliana OX=3702 GN=RALFL24 PE=3 SV=1	[more]
Q2HIM9	2.3e-09	47.89	Protein RALF-like 31 OS=Arabidopsis thaliana OX=3702 GN=RALFL31 PE=3 SV=1	[more]
Q9MA62	1.2e-05	46.55	Protein RALF-like 22 OS=Arabidopsis thaliana OX=3702 GN=RALFL22 PE=3 SV=1	[more]
Q9SRY3	4.5e-05	45.61	Protein RALF-like 1 OS=Arabidopsis thaliana OX=3702 GN=RALF1 PE=1 SV=1	[more]
Q945T0	5.9e-05	43.86	Rapid alkalinization factor OS=Nicotiana tabacum OX=4097 GN=RALF PE=1 SV=1	[more]

BLAST of Chy6G108690 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L7V8	8.5e-23	76.71	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G129640 PE=3 SV=1	[more]
A0A1S3AWQ1	1.9e-22	75.34	protein RALF-like 24 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103483460 PE=3 SV=...	[more]
A0A5D3CZU4	1.9e-22	75.34	Protein RALF-like 24 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A1S4DSF8	1.9e-22	75.34	protein RALF-like 31 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103483460 PE=3 SV=...	[more]
A0A6J1D019	2.3e-20	68.49	protein RALF-like 24 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111016050 P...	[more]

BLAST of Chy6G108690 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011650863.1	7.83e-30	76.71	protein RALF-like 24 [Cucumis sativus] >XP_011650864.1 protein RALF-like 24 [Cuc...	[more]
XP_016898919.1	1.66e-29	75.34	PREDICTED: protein RALF-like 31 isoform X2 [Cucumis melo]	[more]
XP_008438316.1	2.29e-29	75.34	PREDICTED: protein RALF-like 24 isoform X1 [Cucumis melo] >XP_008438319.1 PREDIC...	[more]
XP_038875978.1	2.48e-28	72.60	protein RALF-like 24 [Benincasa hispida] >XP_038875986.1 protein RALF-like 24 [B...	[more]
KAG6582492.1	4.97e-28	71.23	Protein RALF-like 24, partial [Cucurbita argyrosperma subsp. sororia] >KAG701887...	[more]

BLAST of Chy6G108690 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G23805.1	2.5e-11	52.38	ralf-like 24	[more]
AT4G13950.1	1.6e-10	47.89	ralf-like 31	[more]
AT3G05490.1	8.5e-07	46.55	ralf-like 22	[more]
AT1G02900.1	3.2e-06	45.61	rapid alkalinization factor 1	[more]
AT4G15800.1	9.4e-06	46.67	ralf-like 33	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008801	Rapid ALkalinization Factor	PFAM	PF05498	RALF	coord: 21..56 e-value: 3.7E-12 score: 47.0
None	No IPR available	PANTHER	PTHR33136:SF36	PROTEIN RALF-LIKE 31	coord: 3..60
None	No IPR available	PANTHER	PTHR33136	RAPID ALKALINIZATION FACTOR-LIKE	coord: 3..60

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy6G108690.1	Chy6G108690.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0019722	calcium-mediated signaling
cellular_component	GO:0005576	extracellular region