Chy6G108070 (gene) Cucumber (hystrix) v1

Overview
NameChy6G108070
Typegene
OrganismCucumis hystrix (Cucumber (hystrix) v1)
Descriptionreplication factor C subunit 3-like
LocationchrH06: 1867778 .. 1872279 (-)
RNA-Seq ExpressionChy6G108070
SyntenyChy6G108070
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCACACAACAAGAACAACAACCATCCCTCCGCCGTTCCTTGTCAGATTCCAATCACCGCCGCCGACGCAACCGCCGCCGCGCGACGATTTCAACTACATCGTCAAAATCGTCATGGAGTTCAAAGCTAGGCAAACTTCTGGCTCGTTTAGCCTTCTTGTCACGTGACTCAGACCTAACCGAAGAAAGCCTTGAAGCCCACAACAAACGAATCAATGACCTCGATACCCTCGACAAAACCCCAAAATCCAGCCCTTACTACCGTGGACTCACCGATTCCTCTCTCGCCATTAATTACCATCACGGTCCTCTCAATTCCACCCCCTACCACGTAACGTACGCCACCTCAGCTGCCCCCTCCACCCAATCCTCCATCGTCTCCAAACTCAAGGACTACATGGCCCCATGCCTCCGCAAACAACAACCACAATCACCCCAAACTAGTCCACGCAAGGTGCCACGTCAACACCAGAGAATCCAAACTGTTACAACGGCTACAACTGTTGTGACAAAAGCGACGTGGTTCTCTTCCGGGTCGACGTCAGCGTCAGCGACTTTCAAGGAGGAGATGAGTAGTAGTGATGAGATGACGACGAAGAAGAAGCTGTTGAGGGAGAGATTAGTCGTACCGAATGGTGGCGGACGTCGTGACAGCGGTGGCGGAAGTGGCAGCAGTGGAGGAGGAGTTGTGGTGGTGGAGGAGATGGAAAAAGAGAGGTATAGTTGGGGAGATAGTTGTAGACCAAAAGTTTTGGAAGATTTTATATGTAATAAAAAAACGGCAATTGAATTGAAGGAAATGGTAAAAGAAAAAGGATGTGGACATTACTATATATTTGAAGGAGCACCTGGAGTTGGGAAGAGGACTATGATTCAAGCTATGCTTCGTCAAGCTTTTGGAAATCAATCAATGGAGGTGGATTATCAGTACGACTTAATAAACTTTCCCAATTCCCCCGACATTATATACACATGTACATATAGATAAATCATGCATGGCATTATTAAACGGGTTTACTTATGTCGGTTTTGAAACTATCTTAGGCATTAAATAACTTCTAGAGTTTGGTTCCATTTTTATACTTTCAGAAGTTTTAGTTCTCTCACCCTAAAACATAGCTTACATCTAATTATCACCTTAATTAAACGTAGAACTCCAATATGTGATGTTAAGGTTGACATGAAAATATAATCGATTTGGTTTAATTTTAATAGTTTTAGAGGAAGTTGTAATTTTAATTTTATGATCACGTAGGTGAATAAAATATCACTTTTTCAATTGTTACACTAAAAAGAATCTAATTTTAGACTACAAAATAGTCATTTTTTTCTCTTTCTTTTTTCCTTCTAATTTTTTTTTTCAACTTATTTAGGTCAAATTGTAATATAATTATAACCAAATTTTAAGTTTGGTCATTCCAAAGCTATGGATTAATAAATAAGTTATATTTTTTAGTTTAAACGTATGAGACCTAGGAATTGACGTAAAATGATGTTGGTCTTATTGTTGATTATTATTTATTGACTTAATACGTTACAAAATGTAAATCATATCATTCTCTCTCTGTCTCTTTACTGCTTTTTTTTAATTGGGTAGTCAAAGTCCAAAATAAATTATTTAGAAGTTTGTCTAGAAAATACAATCCAAGGAAATTATAGTTTCAAATTTTTGTGTATTCATAGCAATTCTCTACTAAAATAAAAAATTAATCATAATTTTGAAATGGGAATTTAACTAATGACTTATTTTTCCTCTTTCTTTTCTCACAGATCAAAGAAGTGGTCAAGGTTTTTGACTTGAAGGTATGTTCAATCAAATTATATTTTCCCATCTCTTAATATATTAAACGTTCCATAAACATTAATTTAGTTATATGGAGGGGTATTTGGTTAAATTATGGTTAATTAGTAGTAATAATTATTATATGTGACGACTTGGCCGCAGAGTGAAATGTTGGGAAGCATAGAAGTAAAAGTGAAAGAATCATCTCATTACGTGGAAGTCAATATGTCACAAACCAAAGGGTTTGAAAAACAAGTCATCGTCCAGCTCATGAAAGAATCTCACTCCCCTTTGCCATGTAATCATGCCAATTGTCGAGGTAAACACGTCATATATATATATTTATATAGTTCCAATTGGATAATTAAGACGACACATGTGATTTATTTATGTAAAAAAATTAATTTAAATGAACAAAACTGTTAAAAATATTTACCTTTCTAAGATGAACATCAATCAAACTCTATTACTTAACTGATAGACATGTATATGAGTATAGTAAAATTTTACGCGTTTGTATTGATGTTATTTTGTTTGATTTGATATTGAGAATGTAGGGATATTGTTGTGTGAAGCAGATCAATTATCAATTGAAACCCTAATGTACATAAAATGGGCAATGGAAAGGTACAAAGGTTGCAGCAAAATCTTCTTCTGCTGTTCTGATGCCTCTAAGCTTCTCCTTCTTAGCTCTCTCTGCACTCTCGTTCGTCTCTCCCCTCCGTCAAAACAAGAGGTAAACGTGCCATTTATCAATATCTATTATTAGTTAAGTGATAAATATCTATTTTGGTCTATCGTTATCTATCAATTGTATAGAAAGTAAAATGTTGCTATATTTATAAATAAGTTGAACCATTTTGCTATATTTAAAAACATCTCTTTATGATCAAAAGCATGAAACACAAATTAAAAGGTTGATATAGGAAAGGAAAAATAAAAACATACAATTACACGTGATTTTCTTTTTTTAACAAAATGAGACATTCTTTTAATAATAAATTTTTTTTTCAAGAATAATAAAAAAAATACAAAATATTTAGCCTTATGACAAAATTTCATTACACTTGATTTTATCTTAATAGTTTGTTTGCTATTTTAAACCATTTTTCAATAATTAAATATTAAATTTTCACTTCATAATTGAATTTTTTTATTAATATATTTTTTTTTTTTTATTGCTGCAAATCATCCTAACATATGGAAAGAAAAATATGCATAATTTTAAAAATAAAAAAAGTAAAACTAAAATGATTACCAAAACAAAAACAACATATATTAAAAATTATTATAAACGACAAAAATTAAGAAAAATATTTACAACACACATAGCAAGAATTCGTATTTAAAATCTAAAATCATGCTTAATAAAACTATATTTTAACAAGAAATTAATGGTTTTTATTACATTAATCGAGAAAAAATGAAAATAGATTGTGGAAGTGTTGGAGTTCATAGCAAAACAACAAGGATTCGACTTGTCGAAGCGATTGGCGGAGAGAATTGCCGACAATTCCAAGAACAATCTTCGACAAGCCATACGATCCTTAGAGGCGTCCTGGAAAAAAAGGTTAGGGAAATACAATTAATAATTCCTTTCAAGCTTTTCTCTTCTGATTAATTACAAATTAGGGTCATTAATTTTATTATTATTTGACAGTGAAATTACATTAATGTTTTTGCAGTCAATTGTTTGATGAAGATGAGAATAAACTATTGACGGGTTGGGAAGACGACATTGCAGATGTTGCTAAGAAGATAGTCGAAGAGCAAAGCCCAAAACAGTAATCAACTATTTCCCCCTAATTAATGATAATAATAACAGTACTTAGCACTATGTTACATATTGCAATATAAATGATTTATTGCTTCATTGTCTCCATCTACAGGTTGTATATAGTTCGTGGAAAACTCAAAAAGCTTATTGAATATGACGTATCCCCCAATTTCATTTTTAGGGTAATTTTCATAAAAATACTTTTTTTTTTTTTTTTAATTTTTTTTTTTAAAAAAATTAGTATCATCAATCACATTTATTCTCTCATATTTTTCTTTTTCTTAGTCTCTTCATATGCATAATGTGATAGTTTGTGCATGTACAGACTTTAGTAGATGAATTAAAGAAGTTTTTGGATGAAGAATTACAACGTCGTGTTGAAGGTTTCTATGCTGATTATAATGTAAGTGTCTATTGTCATTTTTTTAAATTATAAATTAGATTTGTGAGTAGAGAATTTATTAATGCAAGTTTTGTCATTTTATTATAATGTAATTGAAATATACATAAAAAAATTATATTAATTTAGATATTAATTTGAATTTCAGAAATTGGAGGAAAAAGTATTTGTTGGTGAAAAAGGCAGTGGGGAAGAGGCAGTGGTCAAAGGGCAGCATGATTCAATTAGAAAGAATGTTAACCATTTCTTGAAGATTGAAGGTAATTAATTATTCTAATTAAGTAAAATATATATATTTTTTCCTTTCTTGATTTCGAAATATTATACTAAAAATTCTTAAATTTTTAGATTTATTTCATAGCAAAAGGTTACTATTTGGCTTCTACTTTATCCAAATTTCAATTTCAAATTATTACTAAACTATGACATAGAATTAAATTCTCTCTCGAATTTTTCATTTTTTTTTCTTGTACAGAATTCATAGCCAAGTTCATGAGCTGCTATAAGGGAGAAGCAAATGCCATGAAAATAAATAAATAA

mRNA sequence

ATGGCCACACAACAAGAACAACAACCATCCCTCCGCCGTTCCTTGTCAGATTCCAATCACCGCCGCCGACGCAACCGCCGCCGCGCGACGATTTCAACTACATCGTCAAAATCGTCATGGAGTTCAAAGCTAGGCAAACTTCTGGCTCGTTTAGCCTTCTTGTCACGTGACTCAGACCTAACCGAAGAAAGCCTTGAAGCCCACAACAAACGAATCAATGACCTCGATACCCTCGACAAAACCCCAAAATCCAGCCCTTACTACCGTGGACTCACCGATTCCTCTCTCGCCATTAATTACCATCACGGTCCTCTCAATTCCACCCCCTACCACGTAACGTACGCCACCTCAGCTGCCCCCTCCACCCAATCCTCCATCGTCTCCAAACTCAAGGACTACATGGCCCCATGCCTCCGCAAACAACAACCACAATCACCCCAAACTAGTCCACGCAAGGTGCCACGTCAACACCAGAGAATCCAAACTGTTACAACGGCTACAACTGTTGTGACAAAAGCGACGTGGTTCTCTTCCGGGTCGACGTCAGCGTCAGCGACTTTCAAGGAGGAGATGAGTAGTAGTGATGAGATGACGACGAAGAAGAAGCTGTTGAGGGAGAGATTAGTCGTACCGAATGGTGGCGGACGTCGTGACAGCGGTGGCGGAAGTGGCAGCAGTGGAGGAGGAGTTGTGGTGGTGGAGGAGATGGAAAAAGAGAGGTATAGTTGGGGAGATAGTTGTAGACCAAAAGTTTTGGAAGATTTTATATGTAATAAAAAAACGGCAATTGAATTGAAGGAAATGGTAAAAGAAAAAGGATGTGGACATTACTATATATTTGAAGGAGCACCTGGAGTTGGGAAGAGGACTATGATTCAAGCTATGCTTCGTCAAGCTTTTGGAAATCAATCAATGGAGATCAAAGAAGTGGTCAAGGTTTTTGACTTGAAGAGTGAAATGTTGGGAAGCATAGAAGTAAAAGTGAAAGAATCATCTCATTACGTGGAAGTCAATATGTCACAAACCAAAGGGTTTGAAAAACAAGTCATCGTCCAGCTCATGAAAGAATCTCACTCCCCTTTGCCATGTAATCATGCCAATTGTCGAGGGATATTGTTGTGTGAAGCAGATCAATTATCAATTGAAACCCTAATGTACATAAAATGGGCAATGGAAAGGTACAAAGGTTGCAGCAAAATCTTCTTCTGCTGTTCTGATGCCTCTAAGCTTCTCCTTCTTAGCTCTCTCTGCACTCTCGTTCGTCTCTCCCCTCCGTCAAAACAAGAGATTGTGGAAGTGTTGGAGTTCATAGCAAAACAACAAGGATTCGACTTGTCGAAGCGATTGGCGGAGAGAATTGCCGACAATTCCAAGAACAATCTTCGACAAGCCATACGATCCTTAGAGGCGTCCTGGAAAAAAAGTCAATTGTTTGATGAAGATGAGAATAAACTATTGACGGGTTGGGAAGACGACATTGCAGATGTTGCTAAGAAGATAGTCGAAGAGCAAAGCCCAAAACAGTTGTATATAGTTCGTGGAAAACTCAAAAAGCTTATTGAATATGACGTATCCCCCAATTTCATTTTTAGGACTTTAGTAGATGAATTAAAGAAGTTTTTGGATGAAGAATTACAACGTCGTGTTGAAGGTTTCTATGCTGATTATAATAAATTGGAGGAAAAAGTATTTGTTGGTGAAAAAGGCAGTGGGGAAGAGGCAGTGGTCAAAGGGCAGCATGATTCAATTAGAAAGAATGTTAACCATTTCTTGAAGATTGAAGAATTCATAGCCAAGTTCATGAGCTGCTATAAGGGAGAAGCAAATGCCATGAAAATAAATAAATAA

Coding sequence (CDS)

ATGGCCACACAACAAGAACAACAACCATCCCTCCGCCGTTCCTTGTCAGATTCCAATCACCGCCGCCGACGCAACCGCCGCCGCGCGACGATTTCAACTACATCGTCAAAATCGTCATGGAGTTCAAAGCTAGGCAAACTTCTGGCTCGTTTAGCCTTCTTGTCACGTGACTCAGACCTAACCGAAGAAAGCCTTGAAGCCCACAACAAACGAATCAATGACCTCGATACCCTCGACAAAACCCCAAAATCCAGCCCTTACTACCGTGGACTCACCGATTCCTCTCTCGCCATTAATTACCATCACGGTCCTCTCAATTCCACCCCCTACCACGTAACGTACGCCACCTCAGCTGCCCCCTCCACCCAATCCTCCATCGTCTCCAAACTCAAGGACTACATGGCCCCATGCCTCCGCAAACAACAACCACAATCACCCCAAACTAGTCCACGCAAGGTGCCACGTCAACACCAGAGAATCCAAACTGTTACAACGGCTACAACTGTTGTGACAAAAGCGACGTGGTTCTCTTCCGGGTCGACGTCAGCGTCAGCGACTTTCAAGGAGGAGATGAGTAGTAGTGATGAGATGACGACGAAGAAGAAGCTGTTGAGGGAGAGATTAGTCGTACCGAATGGTGGCGGACGTCGTGACAGCGGTGGCGGAAGTGGCAGCAGTGGAGGAGGAGTTGTGGTGGTGGAGGAGATGGAAAAAGAGAGGTATAGTTGGGGAGATAGTTGTAGACCAAAAGTTTTGGAAGATTTTATATGTAATAAAAAAACGGCAATTGAATTGAAGGAAATGGTAAAAGAAAAAGGATGTGGACATTACTATATATTTGAAGGAGCACCTGGAGTTGGGAAGAGGACTATGATTCAAGCTATGCTTCGTCAAGCTTTTGGAAATCAATCAATGGAGATCAAAGAAGTGGTCAAGGTTTTTGACTTGAAGAGTGAAATGTTGGGAAGCATAGAAGTAAAAGTGAAAGAATCATCTCATTACGTGGAAGTCAATATGTCACAAACCAAAGGGTTTGAAAAACAAGTCATCGTCCAGCTCATGAAAGAATCTCACTCCCCTTTGCCATGTAATCATGCCAATTGTCGAGGGATATTGTTGTGTGAAGCAGATCAATTATCAATTGAAACCCTAATGTACATAAAATGGGCAATGGAAAGGTACAAAGGTTGCAGCAAAATCTTCTTCTGCTGTTCTGATGCCTCTAAGCTTCTCCTTCTTAGCTCTCTCTGCACTCTCGTTCGTCTCTCCCCTCCGTCAAAACAAGAGATTGTGGAAGTGTTGGAGTTCATAGCAAAACAACAAGGATTCGACTTGTCGAAGCGATTGGCGGAGAGAATTGCCGACAATTCCAAGAACAATCTTCGACAAGCCATACGATCCTTAGAGGCGTCCTGGAAAAAAAGTCAATTGTTTGATGAAGATGAGAATAAACTATTGACGGGTTGGGAAGACGACATTGCAGATGTTGCTAAGAAGATAGTCGAAGAGCAAAGCCCAAAACAGTTGTATATAGTTCGTGGAAAACTCAAAAAGCTTATTGAATATGACGTATCCCCCAATTTCATTTTTAGGACTTTAGTAGATGAATTAAAGAAGTTTTTGGATGAAGAATTACAACGTCGTGTTGAAGGTTTCTATGCTGATTATAATAAATTGGAGGAAAAAGTATTTGTTGGTGAAAAAGGCAGTGGGGAAGAGGCAGTGGTCAAAGGGCAGCATGATTCAATTAGAAAGAATGTTAACCATTTCTTGAAGATTGAAGAATTCATAGCCAAGTTCATGAGCTGCTATAAGGGAGAAGCAAATGCCATGAAAATAAATAAATAA

Protein sequence

MATQQEQQPSLRRSLSDSNHRRRRNRRRATISTTSSKSSWSSKLGKLLARLAFLSRDSDLTEESLEAHNKRINDLDTLDKTPKSSPYYRGLTDSSLAINYHHGPLNSTPYHVTYATSAAPSTQSSIVSKLKDYMAPCLRKQQPQSPQTSPRKVPRQHQRIQTVTTATTVVTKATWFSSGSTSASATFKEEMSSSDEMTTKKKLLRERLVVPNGGGRRDSGGGSGSSGGGVVVVEEMEKERYSWGDSCRPKVLEDFICNKKTAIELKEMVKEKGCGHYYIFEGAPGVGKRTMIQAMLRQAFGNQSMEIKEVVKVFDLKSEMLGSIEVKVKESSHYVEVNMSQTKGFEKQVIVQLMKESHSPLPCNHANCRGILLCEADQLSIETLMYIKWAMERYKGCSKIFFCCSDASKLLLLSSLCTLVRLSPPSKQEIVEVLEFIAKQQGFDLSKRLAERIADNSKNNLRQAIRSLEASWKKSQLFDEDENKLLTGWEDDIADVAKKIVEEQSPKQLYIVRGKLKKLIEYDVSPNFIFRTLVDELKKFLDEELQRRVEGFYADYNKLEEKVFVGEKGSGEEAVVKGQHDSIRKNVNHFLKIEEFIAKFMSCYKGEANAMKINK*
Homology
[Close]
BLAST of Chy6G108070 vs. ExPASy Swiss-Prot
Match: Q8VXX4 (Replication factor C subunit 3 OS=Arabidopsis thaliana OX=3702 GN=RFC3 PE=2 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 1.2e-43
Identity = 125/370 (33.78%), Postives = 206/370 (55.68%), Query Frame = 0 

Query: 243 WGDSCRPKVLEDFICNKKTAIELKEMVKEKGCGHYYIFEGAPGVGKRTMIQAMLRQAFGN 302
           W D  RPK L+  I ++  A +LK++V E+ C H  +F G  G GK+T+I A+L+Q +G 
Sbjct: 3   WVDKYRPKSLDKVIVHEDIAQKLKKLVSEQDCPH-LLFYGPSGSGKKTLIMALLKQIYGA 62

Query: 303 QSMEIKEVVKVF--DLKSEMLGSIEVKVKESSHYVEVNMSQTKGFEKQVIVQ-LMKESHS 362
            + ++K   + +  D  S  +  +E+    S+++VE+  S   GF+ + IVQ ++KE   
Sbjct: 63  SAEKVKVENRAWKVDAGSRTI-DLELTTLSSTNHVELTPSDA-GFQDRYIVQEIIKEMAK 122

Query: 363 PLPCNHANCRG---ILLCEADQLSIETLMYIKWAMERYKGCSKIFFCCSDASKLL-LLSS 422
             P +    +G   ++L E D+LS E    ++  ME+Y    ++  CC+ +SK+   + S
Sbjct: 123 NRPIDTKGKKGYKVLVLNEVDKLSREAQHSLRRTMEKYSSSCRLILCCNSSSKVTEAIKS 182

Query: 423 LCTLVRLSPPSKQEIVEVLEFIAKQQGFDLSKRLAERIADNSKNNLRQAIRSLEASWKKS 482
            C  VR++ PS++EIV+VLEF+AK++   L +  A RIA+ S  +LR+AI SLE    ++
Sbjct: 183 RCLNVRINAPSQEEIVKVLEFVAKKESLQLPQGFAARIAEKSNRSLRRAILSLETCRVQN 242

Query: 483 QLFDEDENKLLTGWEDDIADVAKKIVEEQSPKQLYIVRGKLKKLIEYDVSPNFIFRTLVD 542
             F  ++      WE+ +A++A  +++EQSPK+L+ VRGK+ +L+   + P  I + L+ 
Sbjct: 243 YPFTGNQVISPMDWEEYVAEIATDMMKEQSPKKLFQVRGKVYELLVNCIPPEVILKRLLH 302

Query: 543 ELKKFLDEELQRRVEGFYADYNKLEEKVFVGEKGSGEEAVVKGQHDSIRKNVNHFLKIEE 602
           EL K LD EL+  V  + A Y   E ++ +G+K                        IE 
Sbjct: 303 ELLKKLDSELKLEVCHWAAYY---EHRMRLGQKA--------------------IFHIEA 346

Query: 603 FIAKFMSCYK 606
           F+AKFMS YK
Sbjct: 363 FVAKFMSIYK 346

[Close]
BLAST of Chy6G108070 vs. ExPASy Swiss-Prot
Match: Q852K3 (Replication factor C subunit 5 OS=Oryza sativa subsp. japonica OX=39947 GN=RFC5 PE=2 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 7.1e-41
Identity = 116/368 (31.52%), Postives = 191/368 (51.90%), Query Frame = 0 

Query: 243 WGDSCRPKVLEDFICNKKTAIELKEMVKEKGCGHYYIFEGAPGVGKRTMIQAMLRQAFGN 302
           W D  RPK L+    + + A  LK++V E+ C H  +F G  G GK+T++ A+++Q FG 
Sbjct: 3   WVDKYRPKTLDKVTVHDQVAQNLKKLVAEQDCPH-LLFYGPSGSGKKTLVMALIKQMFGA 62

Query: 303 QSMEIKEVVKVFDLKSEMLG-SIEVKVKESSHYVEVNMSQTKGFEKQVIVQLMKESHSPL 362
            + ++K   K + + +      IE+ +  S+H+VE+N S     ++ V+ +++KE     
Sbjct: 63  GADKVKMENKTWKIDTGSRNIEIELAMLSSAHHVEMNPSDAGFQDRYVVQEVIKEMAKNR 122

Query: 363 PCNHANCRG---ILLCEADQLSIETLMYIKWAMERYKGCSKIFFCCSDASKLL-LLSSLC 422
           P +    R    ++L E D+LS E    ++  ME+Y    ++  CC+ +SK+   + S C
Sbjct: 123 PIDAKGKRAFKVLVLNEVDKLSREAQHSLRRTMEKYSASCRLILCCNSSSKVTEAVRSRC 182

Query: 423 TLVRLSPPSKQEIVEVLEFIAKQQGFDLSKRLAERIADNSKNNLRQAIRSLEASWKKSQL 482
             VR++ PS+ +IV+VLEFI K++   L    A RIA  S  NLR+AI   E    +   
Sbjct: 183 LNVRVNAPSEDQIVQVLEFIGKKENLQLPFGFAARIAAQSNRNLRRAILFFETCKVQQYP 242

Query: 483 FDEDENKLLTGWEDDIADVAKKIVEEQSPKQLYIVRGKLKKLIEYDVSPNFIFRTLVDEL 542
           F  ++      WE  ++++A  I++EQSPK+L+ VR K  +L+   + P  I + L+ EL
Sbjct: 243 FTSNQVAPPLDWEQYVSEIAADIMKEQSPKRLFAVRQKFYELLVNCIPPESILKKLLAEL 302

Query: 543 KKFLDEELQRRVEGFYADYNKLEEKVFVGEKGSGEEAVVKGQHDSIRKNVNHFLKIEEFI 602
            K LD +L+  +  + A Y   E K+ +G K                        +E F+
Sbjct: 303 LKKLDSDLKHEICHWAAHY---EHKMRLGSKA--------------------IFHLEAFV 346

Query: 603 AKFMSCYK 606
           AKFMS YK
Sbjct: 363 AKFMSIYK 346

[Close]
BLAST of Chy6G108070 vs. ExPASy Swiss-Prot
Match: Q54BN3 (Probable replication factor C subunit 3 OS=Dictyostelium discoideum OX=44689 GN=rfc3 PE=3 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 5.3e-36
Identity = 109/367 (29.70%), Postives = 186/367 (50.68%), Query Frame = 0 

Query: 243 WGDSCRPKVLEDFICNKKTAIELKEMVKEKGCGHYYIFEGAPGVGKRTMIQAMLRQAFGN 302
           W D  +P  L+    +   +I LK M+K     H  ++ G  G GK+T I A+L++ +G 
Sbjct: 3   WIDKYKPTSLDKMDYHNDISINLKNMIKSGDFPHLLVY-GPSGAGKKTRILAVLQEIYGP 62

Query: 303 QSMEIKEVVKVFDLKSEMLGSIEVKVKESSHYVEVNMSQTKGFEKQVIVQLMKESHSPLP 362
            ++++K   + F   +    +I++    S +++E+N  +   +++ VI  ++KE     P
Sbjct: 63  NALKLKIDHRTFKHPTSS-KNIQITTISSHYHIEINPGEAGSYDRVVIQTIIKEIAQSPP 122

Query: 363 CNHANC---RGILLCEADQLSIETLMYIKWAMERYKGCSKIFFCCSDASKLL-LLSSLCT 422
            +  +    + ++L E D+LS +    ++  ME+Y    ++  CC   +K++  + S C 
Sbjct: 123 IDSGSLGAFKIVILNEVDKLSKDAQHALRRTMEKYATFCRLILCCDSTAKVIDPIKSRCL 182

Query: 423 LVRLSPPSKQEIVEVLEFIAKQQGFDLSKRLAERIADNSKNNLRQAIRSLEASWKKSQLF 482
            +R+  PS++EI +VL  +A  + FDL  +LA  +A  S  NLR A+  LE+   K   F
Sbjct: 183 GIRVPAPSQEEIEKVLAKVATAEKFDLPSKLAVNVAKQSGGNLRYALMLLESQKAKQYPF 242

Query: 483 DEDENKLLTGWEDDIADVAKKIVEEQSPKQLYIVRGKLKKLIEYDVSPNFIFRTLVDELK 542
              E  LL  WE+ I+ + K   EEQSP +L IVRGKL +L+ + + P  IF+TL+ E+ 
Sbjct: 243 QSTELPLL-DWENYISQIVKDCFEEQSPARLSIVRGKLYELLGHCIPPELIFKTLLLEIF 302

Query: 543 KFLDEELQRRVEGFYADYNKLEEKVFVGEKGSGEEAVVKGQHDSIRKNVNHFLKIEEFIA 602
           K LD  ++  +  + + Y   E +  +G K                        +E FIA
Sbjct: 303 KKLDHNMKFEIIHWASYY---EHRSQIGSK--------------------PIFHLEAFIA 343

Query: 603 KFMSCYK 606
           KFMS YK
Sbjct: 363 KFMSVYK 343

[Close]
BLAST of Chy6G108070 vs. ExPASy Swiss-Prot
Match: Q8R323 (Replication factor C subunit 3 OS=Mus musculus OX=10090 GN=Rfc3 PE=1 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 2.7e-32
Identity = 103/367 (28.07%), Postives = 181/367 (49.32%), Query Frame = 0 

Query: 243 WGDSCRPKVLEDFICNKKTAIELKEMVKEKGCGHYYIFEGAPGVGKRTMIQAMLRQAFGN 302
           W D  RP  L     +K+ A +L+ +V+     H  ++ G  G GK+T I  +LR+ +G 
Sbjct: 4   WVDKYRPSSLARLDYHKEQAAQLRNLVQCGDFPHLLVY-GPSGAGKKTRIMCILRELYGI 63

Query: 303 QSMEIKEVVKVFDLKSEMLGSIEVKVKESSHYVEVNMSQTKGFEKQVIVQLMK---ESHS 362
              +++   +     S+    IE+    S++++EVN S     ++ VI +++K   +S  
Sbjct: 64  GVEKLRIEHQTITTPSKK--KIEISTIASNYHLEVNPSDAGNSDRVVIQEMLKTVAQSQQ 123

Query: 363 PLPCNHANCRGILLCEADQLSIETLMYIKWAMERYKGCSKIFFCCSDASKLL-LLSSLCT 422
               +  + + +LL E D+L+ +    ++  ME+Y    ++  CC+  SK++  + S C 
Sbjct: 124 LETSSQRDFKVVLLTEVDKLTKDAQHALRRTMEKYMSTCRLILCCNSTSKVIPPIRSRCL 183

Query: 423 LVRLSPPSKQEIVEVLEFIAKQQGFDLSKRLAERIADNSKNNLRQAIRSLEASWKKSQLF 482
            VR+  PS ++I  VL  + +++G  L   LA R+A+ S  NLR+A+   EA   +   F
Sbjct: 184 AVRVPAPSIEDICSVLSTVCRKEGLALPSTLARRLAEKSCRNLRKALLMCEACRVQQYPF 243

Query: 483 DEDENKLLTGWEDDIADVAKKIVEEQSPKQLYIVRGKLKKLIEYDVSPNFIFRTLVDELK 542
            ED+    T WE  + + A  IV +Q+P++L  VRG+L +L+ + + P  I + L+ EL 
Sbjct: 244 TEDQEIPETDWEVYLRETANAIVSQQTPQRLLEVRGRLYELLTHCIPPEIIMKGLLSELL 303

Query: 543 KFLDEELQRRVEGFYADYNKLEEKVFVGEKGSGEEAVVKGQHDSIRKNVNHFLKIEEFIA 602
              D +L+  V    A Y   E ++ +G K                        +E F+A
Sbjct: 304 HNCDGQLKGEVAQMAAYY---EHRLQLGSKA--------------------IYHLEAFVA 344

Query: 603 KFMSCYK 606
           KFM+ YK
Sbjct: 364 KFMALYK 344

[Close]
BLAST of Chy6G108070 vs. ExPASy Swiss-Prot
Match: Q2TBV1 (Replication factor C subunit 3 OS=Bos taurus OX=9913 GN=RFC3 PE=2 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 3.5e-32
Identity = 103/367 (28.07%), Postives = 182/367 (49.59%), Query Frame = 0 

Query: 243 WGDSCRPKVLEDFICNKKTAIELKEMVKEKGCGHYYIFEGAPGVGKRTMIQAMLRQAFGN 302
           W D  RP  L     +K+ A +L+ +V+     H  ++ G  G GK+T I  +LR+ +G 
Sbjct: 4   WVDKYRPCSLGQLDYHKEQAAQLRNLVQCGDFPHLLVY-GPSGAGKKTRIMCILRELYGV 63

Query: 303 QSMEIKEVVKVFDLKSEMLGSIEVKVKESSHYVEVNMSQTKGFEKQVIVQLMK---ESHS 362
              +++   +     S+    IE+    S++++EVN S     ++ VI +++K   +S  
Sbjct: 64  GVEKLRIEHQTITTPSKK--KIEISTIASNYHLEVNPSDAGNSDRVVIQEMLKTVAQSQQ 123

Query: 363 PLPCNHANCRGILLCEADQLSIETLMYIKWAMERYKGCSKIFFCCSDASKLL-LLSSLCT 422
               +  + + +LL E D+L+ +    ++  ME+Y    ++  CC+  SK++  + S C 
Sbjct: 124 LETSSQKDFKVVLLTEVDKLTKDAQHALRRTMEKYMSTCRLILCCNSTSKVIPPIRSRCL 183

Query: 423 LVRLSPPSKQEIVEVLEFIAKQQGFDLSKRLAERIADNSKNNLRQAIRSLEASWKKSQLF 482
            VR+  PS ++I  VL  + K++G +L  +LA R+A+ S  NLR+A+   EA   +   F
Sbjct: 184 AVRVPAPSIEDICHVLSTVCKKEGLNLPPQLAHRLAEKSCRNLRKALLMCEACRVQQYPF 243

Query: 483 DEDENKLLTGWEDDIADVAKKIVEEQSPKQLYIVRGKLKKLIEYDVSPNFIFRTLVDELK 542
             D+    T WE  + + A  IV +Q+P++L  VRG+L +L+ + + P  I + L+ EL 
Sbjct: 244 TADQEIPETDWEVYLRETANAIVSQQTPQRLLEVRGRLYELLTHCIPPEIIMKGLLSELL 303

Query: 543 KFLDEELQRRVEGFYADYNKLEEKVFVGEKGSGEEAVVKGQHDSIRKNVNHFLKIEEFIA 602
              D +L+  V    A Y   E ++ +G K                        +E F+A
Sbjct: 304 HNCDGQLKGEVAQMAAYY---EHRLQLGSKA--------------------IYHLEAFVA 344

Query: 603 KFMSCYK 606
           KFM+ YK
Sbjct: 364 KFMALYK 344

[Close]
BLAST of Chy6G108070 vs. ExPASy TrEMBL
Match: A0A1S3AWH3 (replication factor C subunit 3-like OS=Cucumis melo OX=3656 GN=LOC103483394 PE=4 SV=1)

HSP 1 Score: 1083.2 bits (2800), Expect = 0.0e+00
Identity = 572/619 (92.41%), Postives = 590/619 (95.32%), Query Frame = 0 

Query: 1   MATQQE-QQPSLRRSLSDSNHRRRRNRRRATISTTSSKSSWSSKLGKLLARLAFLSRDSD 60
           MATQQ+ QQPSLRRSLSDSNHRRRR+RRRATISTTSSKSSWSSKLGKLLARLA LSRDSD
Sbjct: 1   MATQQQLQQPSLRRSLSDSNHRRRRSRRRATISTTSSKSSWSSKLGKLLARLALLSRDSD 60

Query: 61  LTEESLEAHNKRINDLDTLDKTPKSSPYYRGLTDSSLAINYHHGPLNSTPYHVTYATSAA 120
           LTEESLEAHNKRINDLDTL+KTPKSSPYYRGLTDSSLAINYHHGPLNSTPY+VTYATSAA
Sbjct: 61  LTEESLEAHNKRINDLDTLEKTPKSSPYYRGLTDSSLAINYHHGPLNSTPYNVTYATSAA 120

Query: 121 PSTQSSIVSKLKDYMAPCLRKQQPQS--PQTSPRKV-PRQHQRIQTVTTATTVVTKATWF 180
           PSTQSSIVSK K+Y APCLRKQQ Q   P T+P KV PRQHQRIQTVTT+TTVVTKATWF
Sbjct: 121 PSTQSSIVSKFKEYWAPCLRKQQQQQQPPHTTPHKVPPRQHQRIQTVTTSTTVVTKATWF 180

Query: 181 SSGSTSASATFKEEMSSSDEMTTKKKLLRERLVVPNGGGRRDSGGGSGSSGGGVVVVEEM 240
           SSGSTSASA FKEEM SSDEM TKKKLLRERLVV NGG RRD GGGSGS GGGVVVVEEM
Sbjct: 181 SSGSTSASANFKEEM-SSDEMMTKKKLLRERLVVSNGGERRDRGGGSGSGGGGVVVVEEM 240

Query: 241 EKERYSWGDSCRPKVLEDFICNKKTAIELKEMVKEKGCGHYYIFEGAPGVGKRTMIQAML 300
           EKERYSWGD+ RPK LEDFICNKKTAIELKEMVKEKGCGHYYIFEGAPGVGKRTMIQAML
Sbjct: 241 EKERYSWGDNYRPKFLEDFICNKKTAIELKEMVKEKGCGHYYIFEGAPGVGKRTMIQAML 300

Query: 301 RQAFGNQSMEIKEVVKVFDLKSEMLGSIEVKVKESSHYVEVNMSQTKGFEKQVIVQLMKE 360
           R+AFGNQS+EIKEVVKVFDLKSEMLGSIEVKVKESSHYVEVNMSQTKGFEKQVIVQLMKE
Sbjct: 301 REAFGNQSVEIKEVVKVFDLKSEMLGSIEVKVKESSHYVEVNMSQTKGFEKQVIVQLMKE 360

Query: 361 SHSPLPCNHANCRGILLCEADQLSIETLMYIKWAMERYKGCSKIFFCCSDASKLLLLSSL 420
           SHSPLPCNHANCRGILLCEADQLS ETLMY+KWA+ER KGC+KIFFCC+DASKL LLSS+
Sbjct: 361 SHSPLPCNHANCRGILLCEADQLSNETLMYVKWAIERNKGCTKIFFCCTDASKLHLLSSV 420

Query: 421 CTLVRLSPPSKQEIVEVLEFIAKQQGFDLSKRLAERIADNSKNNLRQAIRSLEASWKKSQ 480
           CTLV LSPPSKQEIVEVLEFIAKQQGFDLSKRLAERIADNSKNNLRQAIRSLEASWKKSQ
Sbjct: 421 CTLVHLSPPSKQEIVEVLEFIAKQQGFDLSKRLAERIADNSKNNLRQAIRSLEASWKKSQ 480

Query: 481 LFDEDENKLLTGWEDDIADVAKKIVEEQSPKQLYIVRGKLKKLIEYDVSPNFIFRTLVDE 540
           LFDEDENKLLTGWEDDIADVAKKIVEEQSPKQLYIVRGKLKKLIEYDVSPNFIFRTLVDE
Sbjct: 481 LFDEDENKLLTGWEDDIADVAKKIVEEQSPKQLYIVRGKLKKLIEYDVSPNFIFRTLVDE 540

Query: 541 LKKFLDEELQRRVEGFYADYNKLEEKVFVGEKGSGEEAVVKGQHDSIRKNVNHFLKIEEF 600
           LKKFLDEELQRRVEGFYADY KLEEK FV E+GSGEE VVKGQ+D +RKNVNHFLKIEEF
Sbjct: 541 LKKFLDEELQRRVEGFYADYYKLEEKAFVSERGSGEETVVKGQNDPVRKNVNHFLKIEEF 600

Query: 601 IAKFMSCYKGEANAMKINK 616
           IAKFMSCYKGEANAMKINK
Sbjct: 601 IAKFMSCYKGEANAMKINK 618

[Close]
BLAST of Chy6G108070 vs. ExPASy TrEMBL
Match: A0A5A7TZV7 (Replication factor C subunit 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold171G003010 PE=4 SV=1)

HSP 1 Score: 1019.6 bits (2635), Expect = 5.4e-294
Identity = 536/581 (92.25%), Postives = 553/581 (95.18%), Query Frame = 0 

Query: 17  DSNHRRRRNRRRATISTTSSKSSWSSKLGKLLARLAFLSRDSDLTEESLEAHNKRINDLD 76
           DSNHRRRR+RRRATISTTSSKSSWSSKLGKLLARLA LSRDSDLTEESLEAHNKRINDLD
Sbjct: 4   DSNHRRRRSRRRATISTTSSKSSWSSKLGKLLARLALLSRDSDLTEESLEAHNKRINDLD 63

Query: 77  TLDKTPKSSPYYRGLTDSSLAINYHHGPLNSTPYHVTYATSAAPSTQSSIVSKLKDYMAP 136
           TL+KTPKSSPYYRGLTDSSLAINYHHGPLNSTPY+VTYATSAAPSTQSSIVSK K+Y AP
Sbjct: 64  TLEKTPKSSPYYRGLTDSSLAINYHHGPLNSTPYNVTYATSAAPSTQSSIVSKFKEYWAP 123

Query: 137 CLRKQQPQS--PQTSPRKV-PRQHQRIQTVTTATTVVTKATWFSSGSTSASATFKEEMSS 196
           CLRKQQ Q   P T+P KV PRQHQRIQTVTT+TTVVTKATWFSSGSTSASA FKEEM S
Sbjct: 124 CLRKQQQQQQPPHTTPHKVPPRQHQRIQTVTTSTTVVTKATWFSSGSTSASANFKEEM-S 183

Query: 197 SDEMTTKKKLLRERLVVPNGGGRRDSGGGSGSSGGGVVVVEEMEKERYSWGDSCRPKVLE 256
           SDEM TKKKLLRERLVV NGG RRD GGGSGS GGGVVVVEEMEKERYSWGD+ RPK LE
Sbjct: 184 SDEMMTKKKLLRERLVVSNGGERRDRGGGSGSGGGGVVVVEEMEKERYSWGDNYRPKFLE 243

Query: 257 DFICNKKTAIELKEMVKEKGCGHYYIFEGAPGVGKRTMIQAMLRQAFGNQSMEIKEVVKV 316
           DFICNKKTAIELKEMVKEKGCGHYYIFEGAPGVGKRTMIQAMLR+AFGNQS+EIKEVVKV
Sbjct: 244 DFICNKKTAIELKEMVKEKGCGHYYIFEGAPGVGKRTMIQAMLREAFGNQSVEIKEVVKV 303

Query: 317 FDLKSEMLGSIEVKVKESSHYVEVNMSQTKGFEKQVIVQLMKESHSPLPCNHANCRGILL 376
           FDLKSEMLGSIEVKVKESSHYVEVNMSQTKGFEKQVIVQLMKESHSPLPCNHANCRGILL
Sbjct: 304 FDLKSEMLGSIEVKVKESSHYVEVNMSQTKGFEKQVIVQLMKESHSPLPCNHANCRGILL 363

Query: 377 CEADQLSIETLMYIKWAMERYKGCSKIFFCCSDASKLLLLSSLCTLVRLSPPSKQEIVEV 436
           CEADQLS ETLMY+KWA+ER KGC+KIFFCC+DASKL LLSS+CTLV LSPPSKQEIVEV
Sbjct: 364 CEADQLSNETLMYVKWAIERNKGCTKIFFCCTDASKLHLLSSVCTLVHLSPPSKQEIVEV 423

Query: 437 LEFIAKQQGFDLSKRLAERIADNSKNNLRQAIRSLEASWKKSQLFDEDENKLLTGWEDDI 496
           LEFIAKQQGFDLSKRLAERIADNSKNNLRQAIRSLEASWKKSQLFDEDENKLLTGWEDDI
Sbjct: 424 LEFIAKQQGFDLSKRLAERIADNSKNNLRQAIRSLEASWKKSQLFDEDENKLLTGWEDDI 483

Query: 497 ADVAKKIVEEQSPKQLYIVRGKLKKLIEYDVSPNFIFRTLVDELKKFLDEELQRRVEGFY 556
           ADVAKKIVEEQSPKQLYIVRGKLKKLIEYDVSPNFIFRTLVDELKKFLDEELQRRVEGFY
Sbjct: 484 ADVAKKIVEEQSPKQLYIVRGKLKKLIEYDVSPNFIFRTLVDELKKFLDEELQRRVEGFY 543

Query: 557 ADYNKLEEKVFVGEKGSGEEAVVKGQHDSIRKNVNHFLKIE 595
           ADY KLEEK FV E+GSGEE VVKGQ+D +RKNVNHFLKIE
Sbjct: 544 ADYYKLEEKAFVSERGSGEETVVKGQNDPVRKNVNHFLKIE 583

[Close]
BLAST of Chy6G108070 vs. ExPASy TrEMBL
Match: A0A0A0L960 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G127040 PE=4 SV=1)

HSP 1 Score: 947.6 bits (2448), Expect = 2.6e-272
Identity = 498/508 (98.03%), Postives = 499/508 (98.23%), Query Frame = 0 

Query: 1   MATQQEQQPSLRRSLSDSNHRRRRNRRRATISTTSSKSSWSSKLGKLLARLAFLSRDSDL 60
           MATQQEQQPSLRRSLSDSNHRRRRNRRRATISTTSSKSSWSSKLGKLLARLAFLSRDSDL
Sbjct: 1   MATQQEQQPSLRRSLSDSNHRRRRNRRRATISTTSSKSSWSSKLGKLLARLAFLSRDSDL 60

Query: 61  TEESLEAHNKRINDLDTLDKTPKSSPYYRGLTDSSLAINYHHGPLNSTPYHVTYATSAAP 120
           TEESLEAHNKRINDLDTLDKTPKSSPYYRGLTDSSLAINYHHGPLNSTPYHVTYATSAAP
Sbjct: 61  TEESLEAHNKRINDLDTLDKTPKSSPYYRGLTDSSLAINYHHGPLNSTPYHVTYATSAAP 120

Query: 121 STQSSIVSKLKDYMAPCLRKQQPQSPQTSPRKVPRQHQRIQTVTTATTVVTKATWFSSGS 180
           STQSSIVSK KDYMAPCLRKQQPQSPQTSPRKVPRQHQRIQTVTTATTVVTKATWFSSGS
Sbjct: 121 STQSSIVSKFKDYMAPCLRKQQPQSPQTSPRKVPRQHQRIQTVTTATTVVTKATWFSSGS 180

Query: 181 TSASATFKEEMSSSDEMTTKKKLLRERLVVPNGGGRRDSGGGSGSSGGGVVVVEEMEKER 240
           TSASATFKEEMSSSDEM TKKKLLRERLVVPNGGGRRDSGGGSGSSGGGVVVVEEMEKER
Sbjct: 181 TSASATFKEEMSSSDEMMTKKKLLRERLVVPNGGGRRDSGGGSGSSGGGVVVVEEMEKER 240

Query: 241 YSWGDSCRPKVLEDFICNKKTAIELKEMVKEKGCGHYYIFEGAPGVGKRTMIQAMLRQAF 300
           YSWGDSCRPKVLEDFICNKKTAIELKEMVKEKGCGHYYIFEGAPGVGKRTMIQAMLRQAF
Sbjct: 241 YSWGDSCRPKVLEDFICNKKTAIELKEMVKEKGCGHYYIFEGAPGVGKRTMIQAMLRQAF 300

Query: 301 GNQSMEIKEVVKVFDLKSEMLGSIEVKVKESSHYVEVNMSQTKGFEKQVIVQLMKESHSP 360
           GNQSMEIKEVVKVFDLKSEMLGSIEVKVKESSHYVEVNMSQTKGFEKQVIVQLMKESHSP
Sbjct: 301 GNQSMEIKEVVKVFDLKSEMLGSIEVKVKESSHYVEVNMSQTKGFEKQVIVQLMKESHSP 360

Query: 361 LPCNHANCRGILLCEADQLSIETLMYIKWAMERYKGCSKIFFCCSDASKLLLLSSLCTLV 420
           LPCNHANCR       DQLSIETLMYIKWAMERYKGCSKIFFCCSDASKLLLLSSLCTLV
Sbjct: 361 LPCNHANCR-------DQLSIETLMYIKWAMERYKGCSKIFFCCSDASKLLLLSSLCTLV 420

Query: 421 RLSPPSKQEIVEVLEFIAKQQGFDLSKRLAERIADNSKNNLRQAIRSLEASWKKSQLFDE 480
           RLSPPSKQEIVEVLEFIAKQQGFDLSKRLAERIADNS+NNLRQAIRSLEASWKKSQLFDE
Sbjct: 421 RLSPPSKQEIVEVLEFIAKQQGFDLSKRLAERIADNSRNNLRQAIRSLEASWKKSQLFDE 480

Query: 481 DENKLLTGWEDDIADVAKKIVEEQSPKQ 509
           DENKLLTGWEDDIADVAKKIVEEQSPKQ
Sbjct: 481 DENKLLTGWEDDIADVAKKIVEEQSPKQ 501

[Close]
BLAST of Chy6G108070 vs. ExPASy TrEMBL
Match: A0A5D3D1K1 (Replication factor C subunit 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G003550 PE=4 SV=1)

HSP 1 Score: 874.0 bits (2257), Expect = 3.7e-250
Identity = 459/517 (88.78%), Postives = 476/517 (92.07%), Query Frame = 0 

Query: 81  TPKSSPYYRGLTDSSLAINYHHGPLNSTPYHVTYATSAAPSTQSSIVSKLKDYMAPCLRK 140
           +P  +PYYRGLTDSSLAINYHHGPLNSTPY+VTYATSAAPSTQSSIVSK K+Y APCLRK
Sbjct: 13  SPLVTPYYRGLTDSSLAINYHHGPLNSTPYNVTYATSAAPSTQSSIVSKFKEYWAPCLRK 72

Query: 141 QQPQS--PQTSPRKV-PRQHQRIQTVTTATTVVTKATWFSSGSTSASATFKEEMSSSDEM 200
           QQ Q   P T+P KV PRQHQRIQTVTT+TTVVTKATWFSSGSTSASA FKEEM SSDEM
Sbjct: 73  QQQQQQPPHTTPHKVPPRQHQRIQTVTTSTTVVTKATWFSSGSTSASANFKEEM-SSDEM 132

Query: 201 TTKKKLLRERLVVPNGGGRRDSGGGSGSSGGGVVVVEEMEKERYSWGDSCRPKVLEDFIC 260
            TKKKLLRERLVV NGG RRD GGGSGS GGGVVVVEEMEKERYSWGD+ RPK LEDFIC
Sbjct: 133 MTKKKLLRERLVVSNGGERRDRGGGSGSGGGGVVVVEEMEKERYSWGDNYRPKFLEDFIC 192

Query: 261 NKKTAIELKEMVKEKGCGHYYIFEGAPGVGKRTMIQAMLRQAFGNQSMEIKEVVKVFDLK 320
           NKKTAIELKEMVKEKGCGHYYIFEGAPGVGKRTMIQAMLR+AFGNQS+E           
Sbjct: 193 NKKTAIELKEMVKEKGCGHYYIFEGAPGVGKRTMIQAMLREAFGNQSVE----------- 252

Query: 321 SEMLGSIEVKVKESSHYVEVNMSQTKGFEKQVIVQLMKESHSPLPCNHANCRGILLCEAD 380
           SEMLGSIEVKVKESSHYVEVNMSQTKGFEKQVIVQLMKESHSPLPCNHANCRGI LCEAD
Sbjct: 253 SEMLGSIEVKVKESSHYVEVNMSQTKGFEKQVIVQLMKESHSPLPCNHANCRGISLCEAD 312

Query: 381 QLSIETLMYIKWAMERYKGCSKIFFCCSDASKLLLLSSLCTLVRLSPPSKQEIVEVLEFI 440
           QLS ETLMY+KWA+ER KGC+KIFFCC+DASKL LLSS+CTLV LSPPSKQEIVEVLEFI
Sbjct: 313 QLSNETLMYVKWAIERNKGCTKIFFCCTDASKLHLLSSVCTLVHLSPPSKQEIVEVLEFI 372

Query: 441 AKQQGFDLSKRLAERIADNSKNNLRQAIRSLEASWKKSQLFDEDENKLLTGWEDDIADVA 500
           AKQQGFDLSKRLAERIADNSKNNLRQAIRSLEASWKKSQLFDEDENKLLTGWEDDIADVA
Sbjct: 373 AKQQGFDLSKRLAERIADNSKNNLRQAIRSLEASWKKSQLFDEDENKLLTGWEDDIADVA 432

Query: 501 KKIVEEQSPKQLYIVRGKLKKLIEYDVSPNFIFRTLVDELKKFLDEELQRRVEGFYADYN 560
           KKIVEEQSPKQLYIVRGKLKKLIEYDVSPNFIFRTLVDELKKFLDEELQRRVEGFYADY 
Sbjct: 433 KKIVEEQSPKQLYIVRGKLKKLIEYDVSPNFIFRTLVDELKKFLDEELQRRVEGFYADYY 492

Query: 561 KLEEKVFVGEKGSGEEAVVKGQHDSIRKNVNHFLKIE 595
           KLEEK FV E+GSGEE VVKGQ+D +RKNVNHFLKIE
Sbjct: 493 KLEEKAFVSERGSGEETVVKGQNDPVRKNVNHFLKIE 517

[Close]
BLAST of Chy6G108070 vs. ExPASy TrEMBL
Match: A0A6J1G337 (replication factor C subunit 3-like OS=Cucurbita moschata OX=3662 GN=LOC111450354 PE=4 SV=1)

HSP 1 Score: 798.1 bits (2060), Expect = 2.6e-227
Identity = 455/618 (73.62%), Postives = 506/618 (81.88%), Query Frame = 0 

Query: 2   ATQQE----QQPSLRRSLSDSNHRRRRNRRRATIST--TSSKSSWSSKLGKLLARLAFLS 61
           ATQQ+       SLRRSLSDSN  RRR RRR +IST  +SSKSSWS+KL KLLARL   S
Sbjct: 3   ATQQQPNSSSSSSLRRSLSDSN-TRRRQRRRGSISTASSSSKSSWSTKLAKLLARLNLFS 62

Query: 62  RDSDLTEESLEAHNKRINDLDTLDKTP-KSSPYYRGLTDSSLAINYHHGPLNSTPYHVTY 121
           R+SDLTEESL+AHN+RI+D   LDKTP KSSPYYRGLTDSSLAINYHHGPL + P+H   
Sbjct: 63  RNSDLTEESLQAHNERIDD---LDKTPLKSSPYYRGLTDSSLAINYHHGPLTTGPHHYAS 122

Query: 122 ATSAAPSTQS---SIVSKLKDYMAPCLRKQQPQSPQTSPRKVPRQHQRIQTVTTATTVVT 181
           +T+ A +  S   ++VSKLK++ APCL  +        P   P  HQ+ +T TT TTVV 
Sbjct: 123 STTTAQTQTSLSYAVVSKLKEW-APCLIGK--------PNTKPPAHQQYETPTT-TTVVG 182

Query: 182 KATWFSSGSTSASATFKEEMSSSDEMTTKKKLLRERLVVPNGGGRRDSGGGSGSSGGGVV 241
           K T   S + S+S    E  ++  E    +KLLRERLV+    GRR+ G G G  GGG  
Sbjct: 183 KTT---SLAVSSSPEKIERWATEKE----EKLLRERLVM---YGRREGGSGVGVDGGG-- 242

Query: 242 VVEEMEKERYSWGDSCRPKVLEDFICNKKTAIELKEMVKEKGCGHYYIFEGAPGVGKRTM 301
             E  EKERY+WGD  RPKVLEDFICN+KTA ELK++V+EKGCGH YIFEG PGVGKRTM
Sbjct: 243 --EAAEKERYTWGDKYRPKVLEDFICNRKTACELKKVVEEKGCGH-YIFEGPPGVGKRTM 302

Query: 302 IQAMLRQAFGNQSMEIKEVVKVFDLKSEMLGSIEVKVKESSHYVEVNMSQTKGFEKQVIV 361
           IQAMLRQAFG Q+ME+KEV +VF LKSEM+GSIEVKVKESSH VEVN+SQTKGFEKQVI 
Sbjct: 303 IQAMLRQAFGEQAMEVKEVDRVFALKSEMVGSIEVKVKESSHCVEVNLSQTKGFEKQVID 362

Query: 362 QLMKESHSPLPCNHANCRGILLCEADQLSIETLMYIKWAMERYKGCSKIFFCCSDASKLL 421
           QL+KE+ SPLPCNHA CRGILLCEADQLS ETLMY+KWA+ER KGCSKIFFCCSD SKLL
Sbjct: 363 QLIKETQSPLPCNHARCRGILLCEADQLSNETLMYVKWAIERNKGCSKIFFCCSDVSKLL 422

Query: 422 LLSSLCTLVRLSPPSKQEIVEVLEFIAKQQGFDLSKRLAERIADNSKNNLRQAIRSLEAS 481
           LLSS CT V LSPPSKQEIVEVLE+IAKQQ FDLS+R+AERIADNSKNNLRQAIRSLEAS
Sbjct: 423 LLSSFCTHVHLSPPSKQEIVEVLEYIAKQQEFDLSRRMAERIADNSKNNLRQAIRSLEAS 482

Query: 482 WKKSQLFDEDENKLLTGWEDDIADVAKKIVEEQSPKQLYIVRGKLKKLIEYDVSPNFIFR 541
           WKKS+LF+EDENKLLTGWEDDIADVAKKIVEEQSPKQLYIVRGKLKKLIEYDVSPNFIF+
Sbjct: 483 WKKSRLFEEDENKLLTGWEDDIADVAKKIVEEQSPKQLYIVRGKLKKLIEYDVSPNFIFK 542

Query: 542 TLVDELKKFLDEELQRRVEGFYADYNKLEEKVFVGEKGSGEEAVVKGQHDSIRKNVNHFL 601
           TLVDELKKFLDEELQ RVE FYADYNK+EEK FV EKG+GEEAV+K  HD +RKNVNHFL
Sbjct: 543 TLVDELKKFLDEELQHRVESFYADYNKMEEKPFVTEKGNGEEAVIKELHDPMRKNVNHFL 591

Query: 602 KIEEFIAKFMSCYKGEAN 610
           KIEEFIAKFMSCYKGEAN
Sbjct: 603 KIEEFIAKFMSCYKGEAN 591

[Close]
BLAST of Chy6G108070 vs. NCBI nr
Match: XP_011650816.1 (replication factor C subunit 3 [Cucumis sativus])

HSP 1 Score: 1180 bits (3053), Expect = 0.0
Identity = 610/615 (99.19%), Postives = 612/615 (99.51%), Query Frame = 0 

Query: 1   MATQQEQQPSLRRSLSDSNHRRRRNRRRATISTTSSKSSWSSKLGKLLARLAFLSRDSDL 60
           MATQQEQQPSLRRSLSDSNHRRRRNRRRATISTTSSKSSWSSKLGKLLARLAFLSRDSDL
Sbjct: 1   MATQQEQQPSLRRSLSDSNHRRRRNRRRATISTTSSKSSWSSKLGKLLARLAFLSRDSDL 60

Query: 61  TEESLEAHNKRINDLDTLDKTPKSSPYYRGLTDSSLAINYHHGPLNSTPYHVTYATSAAP 120
           TEESLEAHNKRINDLDTLDKTPKSSPYYRGLTDSSLAINYHHGPLNSTPYHVTYATSAAP
Sbjct: 61  TEESLEAHNKRINDLDTLDKTPKSSPYYRGLTDSSLAINYHHGPLNSTPYHVTYATSAAP 120

Query: 121 STQSSIVSKLKDYMAPCLRKQQPQSPQTSPRKVPRQHQRIQTVTTATTVVTKATWFSSGS 180
           STQSSIVSK KDYMAPCLRKQQPQSPQTSPRKVPRQHQRIQTVTTATTVVTKATWFSSGS
Sbjct: 121 STQSSIVSKFKDYMAPCLRKQQPQSPQTSPRKVPRQHQRIQTVTTATTVVTKATWFSSGS 180

Query: 181 TSASATFKEEMSSSDEMTTKKKLLRERLVVPNGGGRRDSGGGSGSSGGGVVVVEEMEKER 240
           TSASATFKEEMSSSDEM TKKKLLRERLVVPNGGGRRDSGGGSGSSGGGVVVVEEMEKER
Sbjct: 181 TSASATFKEEMSSSDEMMTKKKLLRERLVVPNGGGRRDSGGGSGSSGGGVVVVEEMEKER 240

Query: 241 YSWGDSCRPKVLEDFICNKKTAIELKEMVKEKGCGHYYIFEGAPGVGKRTMIQAMLRQAF 300
           YSWGDSCRPKVLEDFICNKKTAIELKEMVKEKGCGHYYIFEGAPGVGKRTMIQAMLRQAF
Sbjct: 241 YSWGDSCRPKVLEDFICNKKTAIELKEMVKEKGCGHYYIFEGAPGVGKRTMIQAMLRQAF 300

Query: 301 GNQSMEIKEVVKVFDLKSEMLGSIEVKVKESSHYVEVNMSQTKGFEKQVIVQLMKESHSP 360
           GNQSMEIKEVVKVFDLKSEMLGSIEVKVKESSHYVEVNMSQTKGFEKQVIVQLMKESHSP
Sbjct: 301 GNQSMEIKEVVKVFDLKSEMLGSIEVKVKESSHYVEVNMSQTKGFEKQVIVQLMKESHSP 360

Query: 361 LPCNHANCRGILLCEADQLSIETLMYIKWAMERYKGCSKIFFCCSDASKLLLLSSLCTLV 420
           LPCNHANCRGILLCEADQLSIETLMYIKWAMERYKGCSKIFFCCSDASKLLLLSSLCTLV
Sbjct: 361 LPCNHANCRGILLCEADQLSIETLMYIKWAMERYKGCSKIFFCCSDASKLLLLSSLCTLV 420

Query: 421 RLSPPSKQEIVEVLEFIAKQQGFDLSKRLAERIADNSKNNLRQAIRSLEASWKKSQLFDE 480
           RLSPPSKQEIVEVLEFIAKQQGFDLSKRLAERIADNS+NNLRQAIRSLEASWKKSQLFDE
Sbjct: 421 RLSPPSKQEIVEVLEFIAKQQGFDLSKRLAERIADNSRNNLRQAIRSLEASWKKSQLFDE 480

Query: 481 DENKLLTGWEDDIADVAKKIVEEQSPKQLYIVRGKLKKLIEYDVSPNFIFRTLVDELKKF 540
           DENKLLTGWEDDIADVAKKIVEEQSPKQLYIVRGKLKKLIEYDVSPNFIFRTLVDELKKF
Sbjct: 481 DENKLLTGWEDDIADVAKKIVEEQSPKQLYIVRGKLKKLIEYDVSPNFIFRTLVDELKKF 540

Query: 541 LDEELQRRVEGFYADYNKLEEKVFVGEKGSGEEAVVKGQHDSIRKNVNHFLKIEEFIAKF 600
           LDEELQRRVEGFYADYNKLEEKVFV EKGSGEEAV+KGQHDSIRKNVNHFLKIEEFIAKF
Sbjct: 541 LDEELQRRVEGFYADYNKLEEKVFVSEKGSGEEAVIKGQHDSIRKNVNHFLKIEEFIAKF 600

Query: 601 MSCYKGEANAMKINK 615
           MSCYKGEANAMKINK
Sbjct: 601 MSCYKGEANAMKINK 615

[Close]
BLAST of Chy6G108070 vs. NCBI nr
Match: XP_008438224.1 (PREDICTED: replication factor C subunit 3-like [Cucumis melo])

HSP 1 Score: 1087 bits (2812), Expect = 0.0
Identity = 572/619 (92.41%), Postives = 590/619 (95.32%), Query Frame = 0 

Query: 1   MATQQE-QQPSLRRSLSDSNHRRRRNRRRATISTTSSKSSWSSKLGKLLARLAFLSRDSD 60
           MATQQ+ QQPSLRRSLSDSNHRRRR+RRRATISTTSSKSSWSSKLGKLLARLA LSRDSD
Sbjct: 1   MATQQQLQQPSLRRSLSDSNHRRRRSRRRATISTTSSKSSWSSKLGKLLARLALLSRDSD 60

Query: 61  LTEESLEAHNKRINDLDTLDKTPKSSPYYRGLTDSSLAINYHHGPLNSTPYHVTYATSAA 120
           LTEESLEAHNKRINDLDTL+KTPKSSPYYRGLTDSSLAINYHHGPLNSTPY+VTYATSAA
Sbjct: 61  LTEESLEAHNKRINDLDTLEKTPKSSPYYRGLTDSSLAINYHHGPLNSTPYNVTYATSAA 120

Query: 121 PSTQSSIVSKLKDYMAPCLRKQQPQS--PQTSPRKVP-RQHQRIQTVTTATTVVTKATWF 180
           PSTQSSIVSK K+Y APCLRKQQ Q   P T+P KVP RQHQRIQTVTT+TTVVTKATWF
Sbjct: 121 PSTQSSIVSKFKEYWAPCLRKQQQQQQPPHTTPHKVPPRQHQRIQTVTTSTTVVTKATWF 180

Query: 181 SSGSTSASATFKEEMSSSDEMTTKKKLLRERLVVPNGGGRRDSGGGSGSSGGGVVVVEEM 240
           SSGSTSASA FKEEMSS DEM TKKKLLRERLVV NGG RRD GGGSGS GGGVVVVEEM
Sbjct: 181 SSGSTSASANFKEEMSS-DEMMTKKKLLRERLVVSNGGERRDRGGGSGSGGGGVVVVEEM 240

Query: 241 EKERYSWGDSCRPKVLEDFICNKKTAIELKEMVKEKGCGHYYIFEGAPGVGKRTMIQAML 300
           EKERYSWGD+ RPK LEDFICNKKTAIELKEMVKEKGCGHYYIFEGAPGVGKRTMIQAML
Sbjct: 241 EKERYSWGDNYRPKFLEDFICNKKTAIELKEMVKEKGCGHYYIFEGAPGVGKRTMIQAML 300

Query: 301 RQAFGNQSMEIKEVVKVFDLKSEMLGSIEVKVKESSHYVEVNMSQTKGFEKQVIVQLMKE 360
           R+AFGNQS+EIKEVVKVFDLKSEMLGSIEVKVKESSHYVEVNMSQTKGFEKQVIVQLMKE
Sbjct: 301 REAFGNQSVEIKEVVKVFDLKSEMLGSIEVKVKESSHYVEVNMSQTKGFEKQVIVQLMKE 360

Query: 361 SHSPLPCNHANCRGILLCEADQLSIETLMYIKWAMERYKGCSKIFFCCSDASKLLLLSSL 420
           SHSPLPCNHANCRGILLCEADQLS ETLMY+KWA+ER KGC+KIFFCC+DASKL LLSS+
Sbjct: 361 SHSPLPCNHANCRGILLCEADQLSNETLMYVKWAIERNKGCTKIFFCCTDASKLHLLSSV 420

Query: 421 CTLVRLSPPSKQEIVEVLEFIAKQQGFDLSKRLAERIADNSKNNLRQAIRSLEASWKKSQ 480
           CTLV LSPPSKQEIVEVLEFIAKQQGFDLSKRLAERIADNSKNNLRQAIRSLEASWKKSQ
Sbjct: 421 CTLVHLSPPSKQEIVEVLEFIAKQQGFDLSKRLAERIADNSKNNLRQAIRSLEASWKKSQ 480

Query: 481 LFDEDENKLLTGWEDDIADVAKKIVEEQSPKQLYIVRGKLKKLIEYDVSPNFIFRTLVDE 540
           LFDEDENKLLTGWEDDIADVAKKIVEEQSPKQLYIVRGKLKKLIEYDVSPNFIFRTLVDE
Sbjct: 481 LFDEDENKLLTGWEDDIADVAKKIVEEQSPKQLYIVRGKLKKLIEYDVSPNFIFRTLVDE 540

Query: 541 LKKFLDEELQRRVEGFYADYNKLEEKVFVGEKGSGEEAVVKGQHDSIRKNVNHFLKIEEF 600
           LKKFLDEELQRRVEGFYADY KLEEK FV E+GSGEE VVKGQ+D +RKNVNHFLKIEEF
Sbjct: 541 LKKFLDEELQRRVEGFYADYYKLEEKAFVSERGSGEETVVKGQNDPVRKNVNHFLKIEEF 600

Query: 601 IAKFMSCYKGEANAMKINK 615
           IAKFMSCYKGEANAMKINK
Sbjct: 601 IAKFMSCYKGEANAMKINK 618

[Close]
BLAST of Chy6G108070 vs. NCBI nr
Match: KAA0049072.1 (replication factor C subunit 3-like [Cucumis melo var. makuwa])

HSP 1 Score: 1024 bits (2648), Expect = 0.0
Identity = 536/581 (92.25%), Postives = 553/581 (95.18%), Query Frame = 0 

Query: 17  DSNHRRRRNRRRATISTTSSKSSWSSKLGKLLARLAFLSRDSDLTEESLEAHNKRINDLD 76
           DSNHRRRR+RRRATISTTSSKSSWSSKLGKLLARLA LSRDSDLTEESLEAHNKRINDLD
Sbjct: 4   DSNHRRRRSRRRATISTTSSKSSWSSKLGKLLARLALLSRDSDLTEESLEAHNKRINDLD 63

Query: 77  TLDKTPKSSPYYRGLTDSSLAINYHHGPLNSTPYHVTYATSAAPSTQSSIVSKLKDYMAP 136
           TL+KTPKSSPYYRGLTDSSLAINYHHGPLNSTPY+VTYATSAAPSTQSSIVSK K+Y AP
Sbjct: 64  TLEKTPKSSPYYRGLTDSSLAINYHHGPLNSTPYNVTYATSAAPSTQSSIVSKFKEYWAP 123

Query: 137 CLRKQQPQS--PQTSPRKVP-RQHQRIQTVTTATTVVTKATWFSSGSTSASATFKEEMSS 196
           CLRKQQ Q   P T+P KVP RQHQRIQTVTT+TTVVTKATWFSSGSTSASA FKEEMSS
Sbjct: 124 CLRKQQQQQQPPHTTPHKVPPRQHQRIQTVTTSTTVVTKATWFSSGSTSASANFKEEMSS 183

Query: 197 SDEMTTKKKLLRERLVVPNGGGRRDSGGGSGSSGGGVVVVEEMEKERYSWGDSCRPKVLE 256
            DEM TKKKLLRERLVV NGG RRD GGGSGS GGGVVVVEEMEKERYSWGD+ RPK LE
Sbjct: 184 -DEMMTKKKLLRERLVVSNGGERRDRGGGSGSGGGGVVVVEEMEKERYSWGDNYRPKFLE 243

Query: 257 DFICNKKTAIELKEMVKEKGCGHYYIFEGAPGVGKRTMIQAMLRQAFGNQSMEIKEVVKV 316
           DFICNKKTAIELKEMVKEKGCGHYYIFEGAPGVGKRTMIQAMLR+AFGNQS+EIKEVVKV
Sbjct: 244 DFICNKKTAIELKEMVKEKGCGHYYIFEGAPGVGKRTMIQAMLREAFGNQSVEIKEVVKV 303

Query: 317 FDLKSEMLGSIEVKVKESSHYVEVNMSQTKGFEKQVIVQLMKESHSPLPCNHANCRGILL 376
           FDLKSEMLGSIEVKVKESSHYVEVNMSQTKGFEKQVIVQLMKESHSPLPCNHANCRGILL
Sbjct: 304 FDLKSEMLGSIEVKVKESSHYVEVNMSQTKGFEKQVIVQLMKESHSPLPCNHANCRGILL 363

Query: 377 CEADQLSIETLMYIKWAMERYKGCSKIFFCCSDASKLLLLSSLCTLVRLSPPSKQEIVEV 436
           CEADQLS ETLMY+KWA+ER KGC+KIFFCC+DASKL LLSS+CTLV LSPPSKQEIVEV
Sbjct: 364 CEADQLSNETLMYVKWAIERNKGCTKIFFCCTDASKLHLLSSVCTLVHLSPPSKQEIVEV 423

Query: 437 LEFIAKQQGFDLSKRLAERIADNSKNNLRQAIRSLEASWKKSQLFDEDENKLLTGWEDDI 496
           LEFIAKQQGFDLSKRLAERIADNSKNNLRQAIRSLEASWKKSQLFDEDENKLLTGWEDDI
Sbjct: 424 LEFIAKQQGFDLSKRLAERIADNSKNNLRQAIRSLEASWKKSQLFDEDENKLLTGWEDDI 483

Query: 497 ADVAKKIVEEQSPKQLYIVRGKLKKLIEYDVSPNFIFRTLVDELKKFLDEELQRRVEGFY 556
           ADVAKKIVEEQSPKQLYIVRGKLKKLIEYDVSPNFIFRTLVDELKKFLDEELQRRVEGFY
Sbjct: 484 ADVAKKIVEEQSPKQLYIVRGKLKKLIEYDVSPNFIFRTLVDELKKFLDEELQRRVEGFY 543

Query: 557 ADYNKLEEKVFVGEKGSGEEAVVKGQHDSIRKNVNHFLKIE 594
           ADY KLEEK FV E+GSGEE VVKGQ+D +RKNVNHFLKIE
Sbjct: 544 ADYYKLEEKAFVSERGSGEETVVKGQNDPVRKNVNHFLKIE 583

[Close]
BLAST of Chy6G108070 vs. NCBI nr
Match: KAE8650277.1 (hypothetical protein Csa_010879 [Cucumis sativus])

HSP 1 Score: 972 bits (2512), Expect = 0.0
Identity = 505/508 (99.41%), Postives = 506/508 (99.61%), Query Frame = 0 

Query: 1   MATQQEQQPSLRRSLSDSNHRRRRNRRRATISTTSSKSSWSSKLGKLLARLAFLSRDSDL 60
           MATQQEQQPSLRRSLSDSNHRRRRNRRRATISTTSSKSSWSSKLGKLLARLAFLSRDSDL
Sbjct: 1   MATQQEQQPSLRRSLSDSNHRRRRNRRRATISTTSSKSSWSSKLGKLLARLAFLSRDSDL 60

Query: 61  TEESLEAHNKRINDLDTLDKTPKSSPYYRGLTDSSLAINYHHGPLNSTPYHVTYATSAAP 120
           TEESLEAHNKRINDLDTLDKTPKSSPYYRGLTDSSLAINYHHGPLNSTPYHVTYATSAAP
Sbjct: 61  TEESLEAHNKRINDLDTLDKTPKSSPYYRGLTDSSLAINYHHGPLNSTPYHVTYATSAAP 120

Query: 121 STQSSIVSKLKDYMAPCLRKQQPQSPQTSPRKVPRQHQRIQTVTTATTVVTKATWFSSGS 180
           STQSSIVSK KDYMAPCLRKQQPQSPQTSPRKVPRQHQRIQTVTTATTVVTKATWFSSGS
Sbjct: 121 STQSSIVSKFKDYMAPCLRKQQPQSPQTSPRKVPRQHQRIQTVTTATTVVTKATWFSSGS 180

Query: 181 TSASATFKEEMSSSDEMTTKKKLLRERLVVPNGGGRRDSGGGSGSSGGGVVVVEEMEKER 240
           TSASATFKEEMSSSDEM TKKKLLRERLVVPNGGGRRDSGGGSGSSGGGVVVVEEMEKER
Sbjct: 181 TSASATFKEEMSSSDEMMTKKKLLRERLVVPNGGGRRDSGGGSGSSGGGVVVVEEMEKER 240

Query: 241 YSWGDSCRPKVLEDFICNKKTAIELKEMVKEKGCGHYYIFEGAPGVGKRTMIQAMLRQAF 300
           YSWGDSCRPKVLEDFICNKKTAIELKEMVKEKGCGHYYIFEGAPGVGKRTMIQAMLRQAF
Sbjct: 241 YSWGDSCRPKVLEDFICNKKTAIELKEMVKEKGCGHYYIFEGAPGVGKRTMIQAMLRQAF 300

Query: 301 GNQSMEIKEVVKVFDLKSEMLGSIEVKVKESSHYVEVNMSQTKGFEKQVIVQLMKESHSP 360
           GNQSMEIKEVVKVFDLKSEMLGSIEVKVKESSHYVEVNMSQTKGFEKQVIVQLMKESHSP
Sbjct: 301 GNQSMEIKEVVKVFDLKSEMLGSIEVKVKESSHYVEVNMSQTKGFEKQVIVQLMKESHSP 360

Query: 361 LPCNHANCRGILLCEADQLSIETLMYIKWAMERYKGCSKIFFCCSDASKLLLLSSLCTLV 420
           LPCNHANCRGILLCEADQLSIETLMYIKWAMERYKGCSKIFFCCSDASKLLLLSSLCTLV
Sbjct: 361 LPCNHANCRGILLCEADQLSIETLMYIKWAMERYKGCSKIFFCCSDASKLLLLSSLCTLV 420

Query: 421 RLSPPSKQEIVEVLEFIAKQQGFDLSKRLAERIADNSKNNLRQAIRSLEASWKKSQLFDE 480
           RLSPPSKQEIVEVLEFIAKQQGFDLSKRLAERIADNS+NNLRQAIRSLEASWKKSQLFDE
Sbjct: 421 RLSPPSKQEIVEVLEFIAKQQGFDLSKRLAERIADNSRNNLRQAIRSLEASWKKSQLFDE 480

Query: 481 DENKLLTGWEDDIADVAKKIVEEQSPKQ 508
           DENKLLTGWEDDIADVAKKIVEEQSPKQ
Sbjct: 481 DENKLLTGWEDDIADVAKKIVEEQSPKQ 508

[Close]
BLAST of Chy6G108070 vs. NCBI nr
Match: TYK17490.1 (replication factor C subunit 3-like [Cucumis melo var. makuwa])

HSP 1 Score: 877 bits (2265), Expect = 0.0
Identity = 459/517 (88.78%), Postives = 476/517 (92.07%), Query Frame = 0 

Query: 81  TPKSSPYYRGLTDSSLAINYHHGPLNSTPYHVTYATSAAPSTQSSIVSKLKDYMAPCLRK 140
           +P  +PYYRGLTDSSLAINYHHGPLNSTPY+VTYATSAAPSTQSSIVSK K+Y APCLRK
Sbjct: 13  SPLVTPYYRGLTDSSLAINYHHGPLNSTPYNVTYATSAAPSTQSSIVSKFKEYWAPCLRK 72

Query: 141 QQPQS--PQTSPRKVP-RQHQRIQTVTTATTVVTKATWFSSGSTSASATFKEEMSSSDEM 200
           QQ Q   P T+P KVP RQHQRIQTVTT+TTVVTKATWFSSGSTSASA FKEEMSS DEM
Sbjct: 73  QQQQQQPPHTTPHKVPPRQHQRIQTVTTSTTVVTKATWFSSGSTSASANFKEEMSS-DEM 132

Query: 201 TTKKKLLRERLVVPNGGGRRDSGGGSGSSGGGVVVVEEMEKERYSWGDSCRPKVLEDFIC 260
            TKKKLLRERLVV NGG RRD GGGSGS GGGVVVVEEMEKERYSWGD+ RPK LEDFIC
Sbjct: 133 MTKKKLLRERLVVSNGGERRDRGGGSGSGGGGVVVVEEMEKERYSWGDNYRPKFLEDFIC 192

Query: 261 NKKTAIELKEMVKEKGCGHYYIFEGAPGVGKRTMIQAMLRQAFGNQSMEIKEVVKVFDLK 320
           NKKTAIELKEMVKEKGCGHYYIFEGAPGVGKRTMIQAMLR+AFGNQS+E           
Sbjct: 193 NKKTAIELKEMVKEKGCGHYYIFEGAPGVGKRTMIQAMLREAFGNQSVE----------- 252

Query: 321 SEMLGSIEVKVKESSHYVEVNMSQTKGFEKQVIVQLMKESHSPLPCNHANCRGILLCEAD 380
           SEMLGSIEVKVKESSHYVEVNMSQTKGFEKQVIVQLMKESHSPLPCNHANCRGI LCEAD
Sbjct: 253 SEMLGSIEVKVKESSHYVEVNMSQTKGFEKQVIVQLMKESHSPLPCNHANCRGISLCEAD 312

Query: 381 QLSIETLMYIKWAMERYKGCSKIFFCCSDASKLLLLSSLCTLVRLSPPSKQEIVEVLEFI 440
           QLS ETLMY+KWA+ER KGC+KIFFCC+DASKL LLSS+CTLV LSPPSKQEIVEVLEFI
Sbjct: 313 QLSNETLMYVKWAIERNKGCTKIFFCCTDASKLHLLSSVCTLVHLSPPSKQEIVEVLEFI 372

Query: 441 AKQQGFDLSKRLAERIADNSKNNLRQAIRSLEASWKKSQLFDEDENKLLTGWEDDIADVA 500
           AKQQGFDLSKRLAERIADNSKNNLRQAIRSLEASWKKSQLFDEDENKLLTGWEDDIADVA
Sbjct: 373 AKQQGFDLSKRLAERIADNSKNNLRQAIRSLEASWKKSQLFDEDENKLLTGWEDDIADVA 432

Query: 501 KKIVEEQSPKQLYIVRGKLKKLIEYDVSPNFIFRTLVDELKKFLDEELQRRVEGFYADYN 560
           KKIVEEQSPKQLYIVRGKLKKLIEYDVSPNFIFRTLVDELKKFLDEELQRRVEGFYADY 
Sbjct: 433 KKIVEEQSPKQLYIVRGKLKKLIEYDVSPNFIFRTLVDELKKFLDEELQRRVEGFYADYY 492

Query: 561 KLEEKVFVGEKGSGEEAVVKGQHDSIRKNVNHFLKIE 594
           KLEEK FV E+GSGEE VVKGQ+D +RKNVNHFLKIE
Sbjct: 493 KLEEKAFVSERGSGEETVVKGQNDPVRKNVNHFLKIE 517

[Close]
BLAST of Chy6G108070 vs. TAIR 10
Match: AT5G27740.1 (ATPase family associated with various cellular activities (AAA) )

HSP 1 Score: 179.5 bits (454), Expect = 8.3e-45
Identity = 125/370 (33.78%), Postives = 206/370 (55.68%), Query Frame = 0 

Query: 243 WGDSCRPKVLEDFICNKKTAIELKEMVKEKGCGHYYIFEGAPGVGKRTMIQAMLRQAFGN 302
           W D  RPK L+  I ++  A +LK++V E+ C H  +F G  G GK+T+I A+L+Q +G 
Sbjct: 3   WVDKYRPKSLDKVIVHEDIAQKLKKLVSEQDCPH-LLFYGPSGSGKKTLIMALLKQIYGA 62

Query: 303 QSMEIKEVVKVF--DLKSEMLGSIEVKVKESSHYVEVNMSQTKGFEKQVIVQ-LMKESHS 362
            + ++K   + +  D  S  +  +E+    S+++VE+  S   GF+ + IVQ ++KE   
Sbjct: 63  SAEKVKVENRAWKVDAGSRTI-DLELTTLSSTNHVELTPSDA-GFQDRYIVQEIIKEMAK 122

Query: 363 PLPCNHANCRG---ILLCEADQLSIETLMYIKWAMERYKGCSKIFFCCSDASKLL-LLSS 422
             P +    +G   ++L E D+LS E    ++  ME+Y    ++  CC+ +SK+   + S
Sbjct: 123 NRPIDTKGKKGYKVLVLNEVDKLSREAQHSLRRTMEKYSSSCRLILCCNSSSKVTEAIKS 182

Query: 423 LCTLVRLSPPSKQEIVEVLEFIAKQQGFDLSKRLAERIADNSKNNLRQAIRSLEASWKKS 482
            C  VR++ PS++EIV+VLEF+AK++   L +  A RIA+ S  +LR+AI SLE    ++
Sbjct: 183 RCLNVRINAPSQEEIVKVLEFVAKKESLQLPQGFAARIAEKSNRSLRRAILSLETCRVQN 242

Query: 483 QLFDEDENKLLTGWEDDIADVAKKIVEEQSPKQLYIVRGKLKKLIEYDVSPNFIFRTLVD 542
             F  ++      WE+ +A++A  +++EQSPK+L+ VRGK+ +L+   + P  I + L+ 
Sbjct: 243 YPFTGNQVISPMDWEEYVAEIATDMMKEQSPKKLFQVRGKVYELLVNCIPPEVILKRLLH 302

Query: 543 ELKKFLDEELQRRVEGFYADYNKLEEKVFVGEKGSGEEAVVKGQHDSIRKNVNHFLKIEE 602
           EL K LD EL+  V  + A Y   E ++ +G+K                        IE 
Sbjct: 303 ELLKKLDSELKLEVCHWAAYY---EHRMRLGQKA--------------------IFHIEA 346

Query: 603 FIAKFMSCYK 606
           F+AKFMS YK
Sbjct: 363 FVAKFMSIYK 346

The following BLAST results are available for this feature:
BLAST of Chy6G108070 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q8VXX41.2e-4333.78Replication factor C subunit 3 OS=Arabidopsis thaliana OX=3702 GN=RFC3 PE=2 SV=1[more]
Q852K37.1e-4131.52Replication factor C subunit 5 OS=Oryza sativa subsp. japonica OX=39947 GN=RFC5 ... [more]
Q54BN35.3e-3629.70Probable replication factor C subunit 3 OS=Dictyostelium discoideum OX=44689 GN=... [more]
Q8R3232.7e-3228.07Replication factor C subunit 3 OS=Mus musculus OX=10090 GN=Rfc3 PE=1 SV=1[more]
Q2TBV13.5e-3228.07Replication factor C subunit 3 OS=Bos taurus OX=9913 GN=RFC3 PE=2 SV=1[more]
BLAST of Chy6G108070 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3AWH30.0e+0092.41replication factor C subunit 3-like OS=Cucumis melo OX=3656 GN=LOC103483394 PE=4... [more]
A0A5A7TZV75.4e-29492.25Replication factor C subunit 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6... [more]
A0A0A0L9602.6e-27298.03Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G127040 PE=4 SV=1[more]
A0A5D3D1K13.7e-25088.78Replication factor C subunit 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5... [more]
A0A6J1G3372.6e-22773.62replication factor C subunit 3-like OS=Cucurbita moschata OX=3662 GN=LOC11145035... [more]
BLAST of Chy6G108070 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_011650816.10.099.19replication factor C subunit 3 [Cucumis sativus][more]
XP_008438224.10.092.41PREDICTED: replication factor C subunit 3-like [Cucumis melo][more]
KAA0049072.10.092.25replication factor C subunit 3-like [Cucumis melo var. makuwa][more]
KAE8650277.10.099.41hypothetical protein Csa_010879 [Cucumis sativus][more]
TYK17490.10.088.78replication factor C subunit 3-like [Cucumis melo var. makuwa][more]
BLAST of Chy6G108070 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G27740.18.3e-4533.78ATPase family associated with various cellular activities (AAA) [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 542..562
NoneNo IPR availableGENE3D1.10.8.60coord: 426..479
e-value: 3.9E-12
score: 47.6
NoneNo IPR availableGENE3D1.20.272.10coord: 488..604
e-value: 1.3E-24
score: 88.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 139..159
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 140..159
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..38
NoneNo IPR availablePANTHERPTHR11669REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNITcoord: 66..606
NoneNo IPR availablePANTHERPTHR11669:SF52OS10G0574500 PROTEINcoord: 66..606
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 241..425
e-value: 8.4E-24
score: 86.6
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 243..479
IPR008921DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminalSUPERFAMILY48019post-AAA+ oligomerization domain-likecoord: 488..556

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Chy6G108070.1Chy6G108070.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006260 DNA replication
molecular_function GO:0003677 DNA binding