Chy6G107450 (gene) Cucumber (hystrix) v1

Overview


Name	Chy6G107450
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Mads box protein, putative
Location	chrH06: 1413102 .. 1415379 (+)
RNA-Seq Expression	Chy6G107450
Synteny	Chy6G107450

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGAATGAAGCTGCAAGTTTGTTGAAGGAGATAGAATCAGTTGAAGTTTCAAAGAGGTAGAATTATAAGATATATATCCCTAATTGTTTTGGTTTTTAATTGAACACTTAAAAAGTACTTATTTTTAAACCATTGTGTTTAAAGTTTTGAATATTTGTTTGTTCTGATATGATCTGAAGTTTTGGATTTTGTTGTATAAAGCAGGAAATTGTTGGGTGAAGGTCTAGGAACAAGCTCATATGAAGAACTCCAACAATTAGAACAACAACTAGAAAGAAGCTTATCCCATATTAGAGCTAGAAAGGTAATAAAAAAAACTCATCAACTACAACTCTTTTACACACACACACATATATGATAATAACACATTCATAGTTCAACTTTGCCATTGTTTTCAAATAATATTCTTATAATTTTCAAAGTACTTATTTCACCTCTTTTATAGACCATTTTAGATATAAAATAGTGGCAATGATTTTGAATGAAAATTGAGATATTGCACCATATTGTTTCCGATCATTGCCATATAATTTTGGGTATATTATGTTGATTATCTTTAATGTTTCAAATGTAGTTTTGAAATGTTTACGGAAATTGGAGACTCATAACGTCACTTTAATATGAATTTCATCCATTTCATAAAATCATATTGTTTCCGATCATTGCCATATAATTTTGGGTATATTATGTTGATTATCTCTAATGTTTCAAATGTAGTTTTGAAATGTTTACGGAAGTTGAGGACTCACAACGTCACTTTAATATGAATTTCATCCATTTCATAAAATCTTTGGCTCATGAGTTAAATACTGTGAACTTAGGAAACTGCGTTACCCCAATGTTGTTTAATGTCAACTATATTATATAAAAATATATTTATTAAAAAAGATTGTGATGATGTTAATATTATATTAAAAATCCAACAAGTTTTGTTTTGATATTTTGAATTGAGGAAGAAGAAGATGACATGAACTGATGTGTTTTCATGTTTCTGATTTTCAGCATGAGGTTTACAGGGAACAGATAGAACAACTAAAAGAAAAGGTTAGAAATTTGTTTTTAAAATAAATAAAAGCTTCAAAAACTTTATATTTAATTTCCTATGTGATTTTATGAATATTTTCTTGGCATGAATGCTCTTTTTTCTTGCCCCTATAATTCATTTTTCTTCTGTTATTTATTTGGAAACAAAAAAAAAAAAAAAACAAAACAAAACAGGAGAAGCATTTGACAGCTGAAAATGCAAAGCTAGCTAAGAAGGTGAGATAATCGATATATGATCGCTTTTGGACTATTTTCAAATATAACAAATTGAATCAAAATATTTATAAAATATAGTAAAATATCATATAGTTTATGTAGAATGGATCATAATAATAGTTTGTGTTTGGTTAATTTATACGGTGGACCGATTATAAAATTTACTATCTTTATAAATTTTTTCATATAAAATAATTTTTCCTCACGTTTCCTTAATCACTATTTTCTCAAGAAACTAGAAAAAAAAAAATCCTAATTAATAGATTAGATTACAAGATTAGTCGATGAAATTTACTACGGTATCTATTTGATTATTTTGTAATTGCTTTACATTTCTCTAAAATCAATAACCTGCAGGGTATAGAAAAGTAAAACTCAGCTAAAATACAATATTACTCTCGACCGAGAGTTTAAACGTTGAAATCGTCAACTTTACATGTTGTCGAACTACATTTTTTTAAAGAATGTGTCTAGTGTGTGTTCTTAAAATTTTCAAAACATACGTAGTTTTACACATGTTATATCCTTCAATTTATTCTTTGTTATCGATTTTTTTACCGTTTTTAAGAAACCAAGTCTTCACTTAAATACTACGAAAACTAGTTTTTTTCTTCTTCTGGAATTTAACTACGAAAAATGATCGCCATTAAGATAAAACAAGCTTAATCTTAGACATTACATTAAATTTTCTTGTCAATCGGTGATTTTAGGGTTTAGAAATGTTTTTGTTTTTTCTAATATCATGTCTATATATATATATATCGGAGGTATAACTAGGAGTTTAGGGTTTTATCAGACATAAAAGTCCAATCACTACTTGTTATAAGTTCGTGAATTTGTCGAAACACGAAAAGTAATTTGTGATATTTTGCAGTACGACGTTGAAGAGAAGCCTCAACAATCTCCAACACAAATACAGTTGGCAGAAGTTTCACCTAATTATGGAGAAAGTAGTTCCATTTCAGACGTTGAAACTGATTTGTTCATCGGACCTCCCAAGTCCAGATCCAAGTGA

mRNA sequence

ATGAAGAATGAAGCTGCAAGTTTGTTGAAGGAGATAGAATCAGTTGAAGTTTCAAAGAGGAAATTGTTGGGTGAAGGTCTAGGAACAAGCTCATATGAAGAACTCCAACAATTAGAACAACAACTAGAAAGAAGCTTATCCCATATTAGAGCTAGAAAGCATGAGGTTTACAGGGAACAGATAGAACAACTAAAAGAAAAGGAGAAGCATTTGACAGCTGAAAATGCAAAGCTAGCTAAGAAGTACGACGTTGAAGAGAAGCCTCAACAATCTCCAACACAAATACAGTTGGCAGAAGTTTCACCTAATTATGGAGAAAGTAGTTCCATTTCAGACGTTGAAACTGATTTGTTCATCGGACCTCCCAAGTCCAGATCCAAGTGA

Coding sequence (CDS)

ATGAAGAATGAAGCTGCAAGTTTGTTGAAGGAGATAGAATCAGTTGAAGTTTCAAAGAGGAAATTGTTGGGTGAAGGTCTAGGAACAAGCTCATATGAAGAACTCCAACAATTAGAACAACAACTAGAAAGAAGCTTATCCCATATTAGAGCTAGAAAGCATGAGGTTTACAGGGAACAGATAGAACAACTAAAAGAAAAGGAGAAGCATTTGACAGCTGAAAATGCAAAGCTAGCTAAGAAGTACGACGTTGAAGAGAAGCCTCAACAATCTCCAACACAAATACAGTTGGCAGAAGTTTCACCTAATTATGGAGAAAGTAGTTCCATTTCAGACGTTGAAACTGATTTGTTCATCGGACCTCCCAAGTCCAGATCCAAGTGA

Protein sequence

MKNEAASLLKEIESVEVSKRKLLGEGLGTSSYEELQQLEQQLERSLSHIRARKHEVYREQIEQLKEKEKHLTAENAKLAKKYDVEEKPQQSPTQIQLAEVSPNYGESSSISDVETDLFIGPPKSRSK*

Homology

[Close]

BLAST of Chy6G107450 vs. ExPASy Swiss-Prot
Match: O64645 (MADS-box protein SOC1 OS=Arabidopsis thaliana OX=3702 GN=SOC1 PE=1 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 1.4e-23
Identity = 70/127 (55.12%), Postives = 89/127 (70.08%), Query Frame = 0


Query: 1   MKNEAASLLKEIESVEVSKRKLLGEGLGTSSYEELQQLEQQLERSLSHIRARKHEVYREQ 60
           +K EAA+++K+IE +E SKRKLLGEG+GT S EELQQ+EQQLE+S+  IRARK +V++EQ
Sbjct: 90  LKYEAANMMKKIEQLEASKRKLLGEGIGTCSIEELQQIEQQLEKSVKCIRARKTQVFKEQ 149

Query: 61  IEQLKEKEKHLTAENAKLAKKYDVEEKPQQSPTQIQLAEVSPNYGESSSISDVETDLFIG 120
           IEQLK+KEK L AEN KL++K+   E    S    +         ESS  S+VET LFIG
Sbjct: 150 IEQLKQKEKALAAENEKLSEKWGSHESEVWSNKNQE--STGRGDEESSPSSEVETQLFIG 209

Query: 121 PPKSRSK 128
            P S  K
Sbjct: 210 LPCSSRK 214

[Close]

BLAST of Chy6G107450 vs. ExPASy Swiss-Prot
Match: O82743 (Agamous-like MADS-box protein AGL19 OS=Arabidopsis thaliana OX=3702 GN=AGL19 PE=1 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 1.0e-18
Identity = 58/124 (46.77%), Postives = 85/124 (68.55%), Query Frame = 0


Query: 2   KNEAASLLKEIESVEVSKRKLLGEGLGTSSYEELQQLEQQLERSLSHIRARKHEVYREQI 61
           ++E + L K+IE +E+SKRKLLGEG+   S EELQQLE QL+RSLS IRA+K+++ RE+I
Sbjct: 90  RDETSGLTKKIEQLEISKRKLLGEGIDACSIEELQQLENQLDRSLSRIRAKKYQLLREEI 149

Query: 62  EQLKEKEKHLTAENAKLAKKYDVEEKPQQSPTQIQLAEVSPNYGESSSISDVETDLFIGP 121
           E+LK +E++L  EN  L +K+        + +Q  L+    N  ++    +VET LFIGP
Sbjct: 150 EKLKAEERNLVKENKDLKEKWLGMGTATIASSQSTLSSSEVNIDDN---MEVETGLFIGP 209

Query: 122 PKSR 126
           P++R
Sbjct: 210 PETR 210

[Close]

BLAST of Chy6G107450 vs. ExPASy Swiss-Prot
Match: Q38838 (Agamous-like MADS-box protein AGL14 OS=Arabidopsis thaliana OX=3702 GN=AGL14 PE=1 SV=2)

HSP 1 Score: 90.9 bits (224), Expect = 1.1e-17
Identity = 56/124 (45.16%), Postives = 84/124 (67.74%), Query Frame = 0


Query: 2   KNEAASLLKEIESVEVSKRKLLGEGLGTSSYEELQQLEQQLERSLSHIRARKHEVYREQI 61
           K+E   L ++IE +E+S RK++GEGL  SS EELQQLE QL+RSL  IRA+K+++ RE+ 
Sbjct: 91  KDETYGLARKIEHLEISTRKMMGEGLDASSIEELQQLENQLDRSLMKIRAKKYQLLREET 150

Query: 62  EQLKEKEKHLTAENAKLAKKYDVEEKPQQSPTQIQLAEVSPNYGESSSISDVETDLFIGP 121
           E+LKEKE++L AEN  L +K +++ +      +I  +  +       +  +V TDLFIGP
Sbjct: 151 EKLKEKERNLIAENKMLMEKCEMQGRGIIG--RISSSSSTSELDIDDNEMEVVTDLFIGP 210

Query: 122 PKSR 126
           P++R
Sbjct: 211 PETR 212

[Close]

BLAST of Chy6G107450 vs. ExPASy Swiss-Prot
Match: Q9FIS1 (MADS-box protein AGL42 OS=Arabidopsis thaliana OX=3702 GN=AGL42 PE=1 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 6.9e-15
Identity = 53/122 (43.44%), Postives = 76/122 (62.30%), Query Frame = 0


Query: 1   MKNEAASLLKEIESVEVSKRKLLGEGLGTSSYEELQQLEQQLERSLSHIRARKHEVYREQ 60
           +K EA+ ++ +IE +E  KRKLLG+G+ + S EELQ+++ QL+RSL  +R RK ++++EQ
Sbjct: 90  LKQEASHMITKIELLEFHKRKLLGQGIASCSLEELQEIDSQLQRSLGKVRERKAQLFKEQ 149

Query: 61  IEQLKEKEKHLTAENAKLAKKYDVEEKPQQSPTQIQLAEVSPNYGESSSISDVETDLFIG 120
           +E+LK KEK L  EN KL +K  +      S  Q Q       Y       +VETDLFIG
Sbjct: 150 LEKLKAKEKQLLEENVKLHQKNVINPWRGSSTDQQQ-----EKYKVIDLNLEVETDLFIG 206

Query: 121 PP 123
            P
Sbjct: 210 LP 206

[Close]

BLAST of Chy6G107450 vs. ExPASy Swiss-Prot
Match: Q9XJ60 (MADS-box transcription factor 50 OS=Oryza sativa subsp. japonica OX=39947 GN=MADS50 PE=2 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 1.7e-13
Identity = 55/129 (42.64%), Postives = 80/129 (62.02%), Query Frame = 0


Query: 1   MKNEAASLLKEIESVEVSKRKLLGEGLGTSSYEELQQLEQQLERSLSHIRARKHEVYREQ 60
           +K +A  L K++E++E  KRKLLGE L   S EEL  LE +LERSL  IR RK ++  EQ
Sbjct: 89  VKADADGLAKKLEALETYKRKLLGEKLDECSIEELHSLEVKLERSLISIRGRKTKLLEEQ 148

Query: 61  IEQLKEKEKHLTAENAKLAKKYDVEEKPQQSPTQIQLAEVSP--NYGESSSISDVETDLF 120
           + +L+EKE  L  +N +L +K    + P  +P  ++  + +P  N   ++   DVET+LF
Sbjct: 149 VAKLREKEMKLRKDNEELREKCK-NQPPLSAPLTVRAEDENPDRNINTTNDNMDVETELF 208

Query: 121 IG-PPKSRS 127
           IG P +SRS
Sbjct: 209 IGLPGRSRS 216

[Close]

BLAST of Chy6G107450 vs. ExPASy TrEMBL
Match: A0A0A0L4C0 (K-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G124870 PE=4 SV=1)

HSP 1 Score: 222.6 bits (566), Expect = 9.2e-55
Identity = 122/127 (96.06%), Postives = 125/127 (98.43%), Query Frame = 0


Query: 1   MKNEAASLLKEIESVEVSKRKLLGEGLGTSSYEELQQLEQQLERSLSHIRARKHEVYREQ 60
           ++NEAASLLKEIESVEVSKRKLLGE LGTSSYEELQQLEQQLERSLSHIRARKHEVYREQ
Sbjct: 33  VQNEAASLLKEIESVEVSKRKLLGESLGTSSYEELQQLEQQLERSLSHIRARKHEVYREQ 92

Query: 61  IEQLKEKEKHLTAENAKLAKKYDVEEKPQQSPTQIQLAEVSPNYGESSSISDVETDLFIG 120
           IEQLKEKEKHLTAENAKLAKKYDVEE+ QQSPTQIQLAEVSPNYGESSSISDVETDLFIG
Sbjct: 93  IEQLKEKEKHLTAENAKLAKKYDVEEERQQSPTQIQLAEVSPNYGESSSISDVETDLFIG 152

Query: 121 PPKSRSK 128
           PPKSRSK
Sbjct: 153 PPKSRSK 159

[Close]

BLAST of Chy6G107450 vs. ExPASy TrEMBL
Match: A0A1S4DSH6 (MADS-box protein SOC1-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103483321 PE=4 SV=1)

HSP 1 Score: 206.8 bits (525), Expect = 5.2e-50
Identity = 116/128 (90.62%), Postives = 123/128 (96.09%), Query Frame = 0


Query: 1   MKNEAASLLKEIESVEVSKRKLLGEGLGTSSYEELQQLEQQLERSLSHIRARKHEVYREQ 60
           +++EAASLLKEIESVEV+KRKLLGEGLG SSYEELQQLEQQLERSLSHIRARK+EVYREQ
Sbjct: 94  VQSEAASLLKEIESVEVAKRKLLGEGLGKSSYEELQQLEQQLERSLSHIRARKNEVYREQ 153

Query: 61  IEQLKEKEKHLTAENAKLAKKYDVEEKPQQSPT-QIQLAEVSPNYGESSSISDVETDLFI 120
           IEQLKEKEKHL AENAKLAKKY VEE+PQQSPT QIQ+AEVSPNY ESSSISDVETDLFI
Sbjct: 154 IEQLKEKEKHLIAENAKLAKKYFVEEEPQQSPTDQIQIAEVSPNYAESSSISDVETDLFI 213

Query: 121 GPPKSRSK 128
           GPPKSRSK
Sbjct: 214 GPPKSRSK 221

[Close]

BLAST of Chy6G107450 vs. ExPASy TrEMBL
Match: A0A1S3AVA0 (MADS-box protein SOC1-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103483321 PE=4 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 1.7e-40
Identity = 103/128 (80.47%), Postives = 109/128 (85.16%), Query Frame = 0


Query: 1   MKNEAASLLKEIESVEVSKRKLLGEGLGTSSYEELQQLEQQLERSLSHIRARKHEVYREQ 60
           +++EAASLLKEIESVEV+KRKLLGEGLG SSYEELQQLEQQLERSLSHIRAR        
Sbjct: 94  VQSEAASLLKEIESVEVAKRKLLGEGLGKSSYEELQQLEQQLERSLSHIRAR-------- 153

Query: 61  IEQLKEKEKHLTAENAKLAKKYDVEEKPQQSPT-QIQLAEVSPNYGESSSISDVETDLFI 120
                 KEKHL AENAKLAKKY VEE+PQQSPT QIQ+AEVSPNY ESSSISDVETDLFI
Sbjct: 154 ------KEKHLIAENAKLAKKYFVEEEPQQSPTDQIQIAEVSPNYAESSSISDVETDLFI 207

Query: 121 GPPKSRSK 128
           GPPKSRSK
Sbjct: 214 GPPKSRSK 207

[Close]

BLAST of Chy6G107450 vs. ExPASy TrEMBL
Match: A0A6J1FTJ4 (MADS-box protein SOC1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111448338 PE=4 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 4.3e-36
Identity = 91/125 (72.80%), Postives = 109/125 (87.20%), Query Frame = 0


Query: 3   NEAASLLKEIESVEVSKRKLLGEGLGTSSYEELQQLEQQLERSLSHIRARKHEVYREQIE 62
           +EAA+LLKEIES+EVSKRKL G+GLG+SSYEELQQ+EQQL RSL+H+RA KHE Y+EQI+
Sbjct: 91  DEAANLLKEIESLEVSKRKLFGQGLGSSSYEELQQIEQQLHRSLAHVRATKHEAYKEQID 150

Query: 63  QLKEKEKHLTAENAKLAKKYDVEEKPQQSPTQIQLAEVSPNYGESSSISDVETDLFIGPP 122
           QLKEKEK+L AEN KLAKKY V+ +P++S TQ+   EVSPN  E+SS  DVET+LFIGPP
Sbjct: 151 QLKEKEKYLAAENEKLAKKYLVQLEPRRSLTQV--GEVSPNL-ETSSTFDVETELFIGPP 210

Query: 123 KSRSK 128
           KSRSK
Sbjct: 211 KSRSK 212

[Close]

BLAST of Chy6G107450 vs. ExPASy TrEMBL
Match: A0A6J1IGL8 (MADS-box protein SOC1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111472723 PE=4 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 3.6e-35
Identity = 90/125 (72.00%), Postives = 109/125 (87.20%), Query Frame = 0


Query: 3   NEAASLLKEIESVEVSKRKLLGEGLGTSSYEELQQLEQQLERSLSHIRARKHEVYREQIE 62
           ++AA+LLKEIES+E SKRKLLG+GLG+SSYEELQQ+EQQL+ SL+H+RA KHE Y+EQI+
Sbjct: 91  DQAANLLKEIESLEDSKRKLLGQGLGSSSYEELQQIEQQLQSSLAHVRATKHEAYKEQID 150

Query: 63  QLKEKEKHLTAENAKLAKKYDVEEKPQQSPTQIQLAEVSPNYGESSSISDVETDLFIGPP 122
           QLKEKEK+L AEN KLAKKY V+ +P+QS TQ++  EVSP Y E+SS  DVETDLFIGPP
Sbjct: 151 QLKEKEKYLAAENEKLAKKYLVQLEPRQSLTQVR--EVSP-YLETSSTFDVETDLFIGPP 210

Query: 123 KSRSK 128
           K RSK
Sbjct: 211 KPRSK 212

[Close]

BLAST of Chy6G107450 vs. NCBI nr
Match: XP_004133895.1 (MADS-box protein SOC1 isoform X1 [Cucumis sativus] >KGN56596.2 hypothetical protein Csa_010330 [Cucumis sativus])

HSP 1 Score: 221 bits (562), Expect = 1.34e-70
Identity = 122/127 (96.06%), Postives = 125/127 (98.43%), Query Frame = 0


Query: 1   MKNEAASLLKEIESVEVSKRKLLGEGLGTSSYEELQQLEQQLERSLSHIRARKHEVYREQ 60
           ++NEAASLLKEIESVEVSKRKLLGE LGTSSYEELQQLEQQLERSLSHIRARKHEVYREQ
Sbjct: 94  VQNEAASLLKEIESVEVSKRKLLGESLGTSSYEELQQLEQQLERSLSHIRARKHEVYREQ 153

Query: 61  IEQLKEKEKHLTAENAKLAKKYDVEEKPQQSPTQIQLAEVSPNYGESSSISDVETDLFIG 120
           IEQLKEKEKHLTAENAKLAKKYDVEE+ QQSPTQIQLAEVSPNYGESSSISDVETDLFIG
Sbjct: 154 IEQLKEKEKHLTAENAKLAKKYDVEEERQQSPTQIQLAEVSPNYGESSSISDVETDLFIG 213

Query: 121 PPKSRSK 127
           PPKSRSK
Sbjct: 214 PPKSRSK 220

[Close]

BLAST of Chy6G107450 vs. NCBI nr
Match: XP_008438118.1 (PREDICTED: MADS-box protein SOC1-like isoform X1 [Cucumis melo] >XP_016898941.1 PREDICTED: MADS-box protein SOC1-like isoform X1 [Cucumis melo])

HSP 1 Score: 205 bits (521), Expect = 2.36e-64
Identity = 116/128 (90.62%), Postives = 123/128 (96.09%), Query Frame = 0


Query: 1   MKNEAASLLKEIESVEVSKRKLLGEGLGTSSYEELQQLEQQLERSLSHIRARKHEVYREQ 60
           +++EAASLLKEIESVEV+KRKLLGEGLG SSYEELQQLEQQLERSLSHIRARK+EVYREQ
Sbjct: 94  VQSEAASLLKEIESVEVAKRKLLGEGLGKSSYEELQQLEQQLERSLSHIRARKNEVYREQ 153

Query: 61  IEQLKEKEKHLTAENAKLAKKYDVEEKPQQSPT-QIQLAEVSPNYGESSSISDVETDLFI 120
           IEQLKEKEKHL AENAKLAKKY VEE+PQQSPT QIQ+AEVSPNY ESSSISDVETDLFI
Sbjct: 154 IEQLKEKEKHLIAENAKLAKKYFVEEEPQQSPTDQIQIAEVSPNYAESSSISDVETDLFI 213

Query: 121 GPPKSRSK 127
           GPPKSRSK
Sbjct: 214 GPPKSRSK 221

[Close]

BLAST of Chy6G107450 vs. NCBI nr
Match: XP_031737728.1 (MADS-box protein SOC1 isoform X2 [Cucumis sativus])

HSP 1 Score: 187 bits (474), Expect = 2.03e-57
Identity = 108/127 (85.04%), Postives = 111/127 (87.40%), Query Frame = 0


Query: 1   MKNEAASLLKEIESVEVSKRKLLGEGLGTSSYEELQQLEQQLERSLSHIRARKHEVYREQ 60
           ++NEAASLLKEIESVEVSKRKLLGE LGTSSYEELQQLEQQLERSLSHIRARKHEVYREQ
Sbjct: 94  VQNEAASLLKEIESVEVSKRKLLGESLGTSSYEELQQLEQQLERSLSHIRARKHEVYREQ 153

Query: 61  IEQLKEKEKHLTAENAKLAKKYDVEEKPQQSPTQIQLAEVSPNYGESSSISDVETDLFIG 120
           IEQLKEK              YDVEE+ QQSPTQIQLAEVSPNYGESSSISDVETDLFIG
Sbjct: 154 IEQLKEK--------------YDVEEERQQSPTQIQLAEVSPNYGESSSISDVETDLFIG 206

Query: 121 PPKSRSK 127
           PPKSRSK
Sbjct: 214 PPKSRSK 206

[Close]

BLAST of Chy6G107450 vs. NCBI nr
Match: XP_008438119.1 (PREDICTED: MADS-box protein SOC1-like isoform X2 [Cucumis melo])

HSP 1 Score: 174 bits (440), Expect = 3.04e-52
Identity = 103/128 (80.47%), Postives = 109/128 (85.16%), Query Frame = 0


Query: 1   MKNEAASLLKEIESVEVSKRKLLGEGLGTSSYEELQQLEQQLERSLSHIRARKHEVYREQ 60
           +++EAASLLKEIESVEV+KRKLLGEGLG SSYEELQQLEQQLERSLSHIRARK       
Sbjct: 94  VQSEAASLLKEIESVEVAKRKLLGEGLGKSSYEELQQLEQQLERSLSHIRARK------- 153

Query: 61  IEQLKEKEKHLTAENAKLAKKYDVEEKPQQSPT-QIQLAEVSPNYGESSSISDVETDLFI 120
                  EKHL AENAKLAKKY VEE+PQQSPT QIQ+AEVSPNY ESSSISDVETDLFI
Sbjct: 154 -------EKHLIAENAKLAKKYFVEEEPQQSPTDQIQIAEVSPNYAESSSISDVETDLFI 207

Query: 121 GPPKSRSK 127
           GPPKSRSK
Sbjct: 214 GPPKSRSK 207

[Close]

BLAST of Chy6G107450 vs. NCBI nr
Match: XP_038902636.1 (MADS-box protein SOC1-like [Benincasa hispida] >XP_038902644.1 MADS-box protein SOC1-like [Benincasa hispida])

HSP 1 Score: 172 bits (437), Expect = 1.28e-51
Identity = 103/127 (81.10%), Postives = 117/127 (92.13%), Query Frame = 0


Query: 1   MKNEAASLLKEIESVEVSKRKLLGEGLGTSSYEELQQLEQQLERSLSHIRARKHEVYREQ 60
           ++NEAASLLKEIES+EVSKRKLLGE LG+SS++ELQQ+EQQLERSLSH+RARK+E+Y+EQ
Sbjct: 93  VQNEAASLLKEIESLEVSKRKLLGEDLGSSSFDELQQIEQQLERSLSHVRARKNELYKEQ 152

Query: 61  IEQLKEKEKHLTAENAKLAKKYDVEEKPQQSPTQIQLAEVSPNYGESSSISDVETDLFIG 120
           IEQLK KEK+L  ENAKLAKKY VE++ QQSPTQ QLAEVSP Y ESSSISDVETDLFIG
Sbjct: 153 IEQLKRKEKNLADENAKLAKKYCVEQERQQSPTQ-QLAEVSP-YPESSSISDVETDLFIG 212

Query: 121 PP-KSRS 126
           PP KSRS
Sbjct: 213 PPNKSRS 217

[Close]

BLAST of Chy6G107450 vs. TAIR 10
Match: AT2G45660.1 (AGAMOUS-like 20 )

HSP 1 Score: 110.5 bits (275), Expect = 9.8e-25
Identity = 70/127 (55.12%), Postives = 89/127 (70.08%), Query Frame = 0


Query: 1   MKNEAASLLKEIESVEVSKRKLLGEGLGTSSYEELQQLEQQLERSLSHIRARKHEVYREQ 60
           +K EAA+++K+IE +E SKRKLLGEG+GT S EELQQ+EQQLE+S+  IRARK +V++EQ
Sbjct: 90  LKYEAANMMKKIEQLEASKRKLLGEGIGTCSIEELQQIEQQLEKSVKCIRARKTQVFKEQ 149

Query: 61  IEQLKEKEKHLTAENAKLAKKYDVEEKPQQSPTQIQLAEVSPNYGESSSISDVETDLFIG 120
           IEQLK+KEK L AEN KL++K+   E    S    +         ESS  S+VET LFIG
Sbjct: 150 IEQLKQKEKALAAENEKLSEKWGSHESEVWSNKNQE--STGRGDEESSPSSEVETQLFIG 209

Query: 121 PPKSRSK 128
            P S  K
Sbjct: 210 LPCSSRK 214

[Close]

BLAST of Chy6G107450 vs. TAIR 10
Match: AT4G22950.1 (AGAMOUS-like 19 )

HSP 1 Score: 94.4 bits (233), Expect = 7.3e-20
Identity = 58/124 (46.77%), Postives = 85/124 (68.55%), Query Frame = 0


Query: 2   KNEAASLLKEIESVEVSKRKLLGEGLGTSSYEELQQLEQQLERSLSHIRARKHEVYREQI 61
           ++E + L K+IE +E+SKRKLLGEG+   S EELQQLE QL+RSLS IRA+K+++ RE+I
Sbjct: 90  RDETSGLTKKIEQLEISKRKLLGEGIDACSIEELQQLENQLDRSLSRIRAKKYQLLREEI 149

Query: 62  EQLKEKEKHLTAENAKLAKKYDVEEKPQQSPTQIQLAEVSPNYGESSSISDVETDLFIGP 121
           E+LK +E++L  EN  L +K+        + +Q  L+    N  ++    +VET LFIGP
Sbjct: 150 EKLKAEERNLVKENKDLKEKWLGMGTATIASSQSTLSSSEVNIDDN---MEVETGLFIGP 209

Query: 122 PKSR 126
           P++R
Sbjct: 210 PETR 210

[Close]

BLAST of Chy6G107450 vs. TAIR 10
Match: AT4G11880.1 (AGAMOUS-like 14 )

HSP 1 Score: 90.9 bits (224), Expect = 8.1e-19
Identity = 56/124 (45.16%), Postives = 84/124 (67.74%), Query Frame = 0


Query: 2   KNEAASLLKEIESVEVSKRKLLGEGLGTSSYEELQQLEQQLERSLSHIRARKHEVYREQI 61
           K+E   L ++IE +E+S RK++GEGL  SS EELQQLE QL+RSL  IRA+K+++ RE+ 
Sbjct: 91  KDETYGLARKIEHLEISTRKMMGEGLDASSIEELQQLENQLDRSLMKIRAKKYQLLREET 150

Query: 62  EQLKEKEKHLTAENAKLAKKYDVEEKPQQSPTQIQLAEVSPNYGESSSISDVETDLFIGP 121
           E+LKEKE++L AEN  L +K +++ +      +I  +  +       +  +V TDLFIGP
Sbjct: 151 EKLKEKERNLIAENKMLMEKCEMQGRGIIG--RISSSSSTSELDIDDNEMEVVTDLFIGP 210

Query: 122 PKSR 126
           P++R
Sbjct: 211 PETR 212

[Close]

BLAST of Chy6G107450 vs. TAIR 10
Match: AT5G62165.1 (AGAMOUS-like 42 )

HSP 1 Score: 81.6 bits (200), Expect = 4.9e-16
Identity = 53/122 (43.44%), Postives = 76/122 (62.30%), Query Frame = 0


Query: 1   MKNEAASLLKEIESVEVSKRKLLGEGLGTSSYEELQQLEQQLERSLSHIRARKHEVYREQ 60
           +K EA+ ++ +IE +E  KRKLLG+G+ + S EELQ+++ QL+RSL  +R RK ++++EQ
Sbjct: 90  LKQEASHMITKIELLEFHKRKLLGQGIASCSLEELQEIDSQLQRSLGKVRERKAQLFKEQ 149

Query: 61  IEQLKEKEKHLTAENAKLAKKYDVEEKPQQSPTQIQLAEVSPNYGESSSISDVETDLFIG 120
           +E+LK KEK L  EN KL +K  +      S  Q Q       Y       +VETDLFIG
Sbjct: 150 LEKLKAKEKQLLEENVKLHQKNVINPWRGSSTDQQQ-----EKYKVIDLNLEVETDLFIG 206

Query: 121 PP 123
            P
Sbjct: 210 LP 206

[Close]

BLAST of Chy6G107450 vs. TAIR 10
Match: AT5G62165.2 (AGAMOUS-like 42 )

HSP 1 Score: 81.6 bits (200), Expect = 4.9e-16
Identity = 53/122 (43.44%), Postives = 76/122 (62.30%), Query Frame = 0


Query: 1   MKNEAASLLKEIESVEVSKRKLLGEGLGTSSYEELQQLEQQLERSLSHIRARKHEVYREQ 60
           +K EA+ ++ +IE +E  KRKLLG+G+ + S EELQ+++ QL+RSL  +R RK ++++EQ
Sbjct: 90  LKQEASHMITKIELLEFHKRKLLGQGIASCSLEELQEIDSQLQRSLGKVRERKAQLFKEQ 149

Query: 61  IEQLKEKEKHLTAENAKLAKKYDVEEKPQQSPTQIQLAEVSPNYGESSSISDVETDLFIG 120
           +E+LK KEK L  EN KL +K  +      S  Q Q       Y       +VETDLFIG
Sbjct: 150 LEKLKAKEKQLLEENVKLHQKNVINPWRGSSTDQQQ-----EKYKVIDLNLEVETDLFIG 206

Query: 121 PP 123
            P
Sbjct: 210 LP 206

The following BLAST results are available for this feature:

BLAST of Chy6G107450 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O64645	1.4e-23	55.12	MADS-box protein SOC1 OS=Arabidopsis thaliana OX=3702 GN=SOC1 PE=1 SV=1	[more]
O82743	1.0e-18	46.77	Agamous-like MADS-box protein AGL19 OS=Arabidopsis thaliana OX=3702 GN=AGL19 PE=...	[more]
Q38838	1.1e-17	45.16	Agamous-like MADS-box protein AGL14 OS=Arabidopsis thaliana OX=3702 GN=AGL14 PE=...	[more]
Q9FIS1	6.9e-15	43.44	MADS-box protein AGL42 OS=Arabidopsis thaliana OX=3702 GN=AGL42 PE=1 SV=1	[more]
Q9XJ60	1.7e-13	42.64	MADS-box transcription factor 50 OS=Oryza sativa subsp. japonica OX=39947 GN=MAD...	[more]

BLAST of Chy6G107450 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L4C0	9.2e-55	96.06	K-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G124870 PE=4 ...	[more]
A0A1S4DSH6	5.2e-50	90.63	MADS-box protein SOC1-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103483321 PE...	[more]
A0A1S3AVA0	1.7e-40	80.47	MADS-box protein SOC1-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103483321 PE...	[more]
A0A6J1FTJ4	4.3e-36	72.80	MADS-box protein SOC1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111448...	[more]
A0A6J1IGL8	3.6e-35	72.00	MADS-box protein SOC1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC11147272...	[more]

BLAST of Chy6G107450 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004133895.1	1.34e-70	96.06	MADS-box protein SOC1 isoform X1 [Cucumis sativus] >KGN56596.2 hypothetical prot...	[more]
XP_008438118.1	2.36e-64	90.63	PREDICTED: MADS-box protein SOC1-like isoform X1 [Cucumis melo] >XP_016898941.1 ...	[more]
XP_031737728.1	2.03e-57	85.04	MADS-box protein SOC1 isoform X2 [Cucumis sativus]	[more]
XP_008438119.1	3.04e-52	80.47	PREDICTED: MADS-box protein SOC1-like isoform X2 [Cucumis melo]	[more]
XP_038902636.1	1.28e-51	81.10	MADS-box protein SOC1-like [Benincasa hispida] >XP_038902644.1 MADS-box protein ...	[more]

BLAST of Chy6G107450 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G45660.1	9.8e-25	55.12	AGAMOUS-like 20	[more]
AT4G22950.1	7.3e-20	46.77	AGAMOUS-like 19	[more]
AT4G11880.1	8.1e-19	45.16	AGAMOUS-like 14	[more]
AT5G62165.1	4.9e-16	43.44	AGAMOUS-like 42	[more]
AT5G62165.2	4.9e-16	43.44	AGAMOUS-like 42	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 32..81
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 88..114
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 81..127
None	No IPR available	PANTHER	PTHR11945:SF488	MADS-BOX TRANSCRIPTION FACTOR 56	coord: 5..126
None	No IPR available	PANTHER	PTHR11945	MADS BOX PROTEIN	coord: 5..126
IPR002487	Transcription factor, K-box	PFAM	PF01486	K-box	coord: 1..82 e-value: 4.0E-25 score: 87.8
IPR002487	Transcription factor, K-box	PROSITE	PS51297	K_BOX	coord: 1..90 score: 15.1248

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy6G107450.1	Chy6G107450.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045944	positive regulation of transcription by RNA polymerase II
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity