Chy6G106970 (gene) Cucumber (hystrix) v1

Overview


Name	Chy6G106970
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	RNA polymerase I-specific transcription initiation factor RRN3
Location	chrH06: 1096334 .. 1108118 (+)
RNA-Seq Expression	Chy6G106970
Synteny	Chy6G106970

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGGCAGAACTTGAAAATAATCAAGCTCAGTTGCACGCTATGGAGGATATTAATCTCACAGATGCCCAGTTAGTTGATTTCATTAGGGGTTTTCTTAGTTCAGTGTCACTGGTATTGTTCTCTTAACATCATTATTGGTCTTTACTTAAATAAAAGATCATATAGCAATTGATTTTCGAAGTGCACTCTCTTAGTTTATTATTTGGGACGTGCTTTTGGGTTCTCACTGCTAATCAAGTTATTTTTTGAGGAATAACTGTTGTAACCTTATGAAATCTCTTCCATTGGTGTAGGGAGATATCGATGGGTATAACCAGCTTGTGGGTGTTATACACCACAGGGATCGACTATCTCCCGACGAGGTTGCCTTGCTCGTGGTATGTTCTTTTCAACACATCTGTTTTTGACAATTGATATGAGATTTAACTTCATGTTAAATATTATCTAGTTTGTAACTCACTTGATGCGCTTAACAGACATGTTTGAAGGCACTATCTGGAGCAGTTTCTTGTATAGATATCATTCTCCATGAATCACTGCTTGCAGCAGTAAGTTTATCTCTAAACTCCGAGTCACTATCCTGCAATTTTGTTGTTGTAATGTAAGTTCTTTCTCAGATTTTTAAAATGAGCTTGTGGGATTATGGACCTAATGTGATGGATGCCCTGATTGAACTAATAATATCCCTGGTATGAGCATTTATGATAATAGTTTTCACTCTTTCTCTAGGCTCACCTAATAGTTCTTCTGACTTTTTTTCTTTTCATTGTTTCAGGCTGTTTCAAATGGAAAATATGTGGATTCATGCTTGGATATGCTTGTAAATAACTTCATGCCGCCCAATTCCTACATGGATTTCCTGAAGAAACCACATGGTCTTACCATAAAGGAGGAAGTTCTTTCTCGAGTGCACACAGCTCTAAAAGATATATCGGACTTGGTGCCTCTTGCACCGTTGAGACTGGAGCAGAAAGTTGTCCATAAAATGCAAAGAGTCTTTTTCAATGAATCTGTGAGTTGAATTTTCATGGGCTAAAAGTTGCCTTTAGAGAAATCTAAGTGAAAGTTGTTTTTATTTCTCACTGAAGATCATCGATATTTTATCTTTGTAATGTTTTCTCTAAAAAATATTTCTAATTTTGGTATTTTTTTTAAAAAATTTCTACCACTGTTTTACTCTCACGATCATCAATCCAATGACTATTGGAAGTTTGGTGTGAAGCTGAAAGCCCATTACCAGTTTGAATGCTTTGGCTTTGGCACACTGAAGTATTAGATGACTAGATTTATATTGTTTCGAATTTTGATTACGCTACCAAACATAGTTCAAACTAGAACAATGCCTGATAATGATTTATAGTTGAAATGCAGTGTATATTTACTAGATGCTGCACTGGTACGATCTTTGAATGTATGAACTCCTCTTAAATTTTGTGAATAAATACGTTCATATGATTCAGATAAATAGGTCATTTAAAGAGTCAGGTACAAAAAAGATGATTACGTTTTCAAAATCCCTGACCGAAACTTTTTACAGATGCTTTTTGCTTGCTTTGAGGAGAGAAATTGCTTTAATATCTTTTAAAAGCTCAATGTCTATTTCACCTTCAAAACATTTGCACTCTTTGTTAGGTTTTTTTTTTTTTAATTTAAATTAATTTTTTTAAAAATATATATATATATTGTGTCTCCTACTTACATTTGTTTAATCCCAATGTAGTGTGTGTGTGTCTATACATATATTGTGTCTCCCACTTACATCTGTTTAATCGCACTGTAGTTGACCACGATATATGTGGAAAACATGTTGAGGTTGGAAAAGGGTGCATTGAGTGAATTTGTTGGGAGAAAGATCTTAACTGCGCTGGTGGATAAGCTTCTAGATTTGGATGTAAGGAAACACAAATATTTTACTGCAAATTTGTTTATGCGATTGCTTTATCATTAATATTAATTAGTTCTAACCTTCTGGTAGGTGGAGATTGGATGGGATGATATCCTAAAAGACGATTTCAGTAAAGGAATTTTTGAGATGGAACTTGAAGATGACGACGACACTACAGATGATATTAATGAGGATTCTAGTGAGGTATGATATTCAATACCTATCTAGATTTAGAAGGATATTTCTTCAACTAAGTTGTAATGGTATTTAATCTTTCTTAGCTTTTCTTCGTTTTGTTTTGGAGTAGAGCTTGAGGCTTATGCTTTAAGGCTCATCTATAGGCAAGACTCTACTCTTTAACTTTTAGCCTCAAGATTTACCCATTTGTTGAAAAAAAAAAAGGCTTATCCATTGGTAAAAAGGCATTAGTAATATTGATTATAATTAAGAACAGAATTGATTTGTGTCATTCTTTTAAAATACAGAGGTTTAAGTTGTGATGATTTGAACTATTGCTACTTTTAGTATTATGACTTTAAAAACATTGAAGATGATAAATTATGGTTTAAGTCAATCCTATTAATGATAATAGTAGTGATGTTATAAATATCATTTTAAAATATTGTTTTTTTTAAGTGGCAATTGACGGGGTGAACTTTTTATACTACTACTATAGTATTATGTTTAACAACACCTGGTCATGCCAATTTTAGATTTGTAAAACGTTTTTAATTAACTTTGAGGCTTACAACTTGCCTTGAAGCTAATTGTCTTTTGGGTCTACCAAGTTTATACTCAAGCTGAGTCAGGTTTTTAAAATAATATGTGACTTTTTTTTTGAAAAATTACTTACATTTTGACTTTTCTGCCATACATCTTGATGCTTCTTTTAATTCATGCCGTTATTTGCTTGGCTAAATTTAATTTACTTTGCTAGCTTCCAAGAGAACTAAGCCGTAGAAGCTTAGGTGGAAATGTAATTGCTGAAACGTTAGATAGCTTGATTGTTCTAACATTTGAACATCTTGAATCATGTGAACGTGATGGACGATTGAATGAGGTACCTTCTGTAGTTTATATAATTTTCCTTTGTTCTCAATTTCTTTGTTTTATTCTGTAAGTATGAACCGTTCCATGTTTCTTTAATGTGGAGGTCAGGTTTTTGACATTTTACTCCTATCATTCCAAAGAACTGTTCTGACTGCTTACAAGTCTAAATTTGCTCAGGTAATTAACATGCCCTTGCCATAATTCTCGATATTTGCTTGGTTTAGTGGGCCCTCATTTTATATCAATTTTTTTGTTGATGAAGACTGAATGACTTACTTTTGATGCCTTTTTTTGGCAGTTTATCGTGTTCTATGCTTGTTCATTAGATCCTGAAGTTTGTGGTGCGAGATTTGCCGTTTCTCTGGCTGATATGTTTGTTTCCTGCAATGATCCTCCGCTTATCAGGTATTAGCAATTCATTAGAATTTTATATACAATTTGTTTGAATAGCTGAGTAGCCTTGTACATAAAATATAATCTTACAACTTCCCTCCGTCTCACACACTAGTGGGTCCCCTGTCTGAACCTGCGCTCAAACAAATATTTTCATTTTTTCTACAAAAATGAATTTGTTCTTAGCTTTTGAAAACACAAAAATATTTTCCTCCTCCTTTTCTTTTTTCTTTTTAATATAAAAATGAAGTTACATAATGTATGTTTGTAATGTTGTGCAGGATGAGTGCTGTTTCATATCTTGCTAGTTTCTTATCTCGTGGGAAGTTTTTGACAACCTCTTTGGTTACAACTATATTGAAAAGGTTAACTTGACAACTTTAACTATATTTTGATGAAATTAATATCGGTAGGGTGTGGCTCTAAGTCTAGTTTTGCTTCTTATTTCTTTCAGACTGGTGGATTGGTGTTTAGAATATGGCAAAACACTGAATGTTGACCCGAACCCAAAGGCTCATAAAGTATTTTATTCTGGTTGCCAGGTATACAATACTTGAACTCCTTATTGCTAGACTAAGGCAGTGGGATTTGTTGAAAAATGGAAATATAATGATTGAATTGTTGAAAAACGGTAATATAGCCCTTCTACCCGCTAGTTGAAGGACCTTACTTACATGCTCAGGAAAACATCCTTCGGTCCGATGGAGGCTATGGGTTGAAAGAAACTTTAGAATCTTTCTTGAATCGTGATCAAGAAACTGACCTTGACTTGTTTTGGAATTTGGTTCCTCTCTATGCATTTACTTGGTCTTCTACTTCTAAATTCTATTGTAATTATAACCCTACCCAAACTTATTCTAGCTGGGATTTTTTCCCTTGTAAAATATCTTTCCCACTCCAACTCCACTAACACGGAAAGAGAATTTAACCTCTGAGATTATTGTTATCTAATTCTCCCCCTTATATTCATGAAAATCAAGGGGTCAATTGGCAAACCCTGAAATGGTTTTTTCGGTTACTTTATTTTATTTTTATTATTTTAAATTCTCCCTCGTTGAGTCCTAAAGAAATAAAACTGGACTTTGAAATATTGATTCAATTCTAACTCCTTTCATTGCATCTTGGAGAATGAACTTCATGAATGTGTTGGTTAATTAGAAAAAATGGCATTCTTGCAGTTTTTCATTTACAAGATTTAGAACTTTTTCCCCCTTTTTCTTAATGATTTCTTTTTTACAGGCCATAATGTATGTGCTTTGCTTCCGGATGAGGTCCATTTTGGAAATTCCACGTCTGAAGTCCCAACTTCTGCTTATGCCCATAGGTCCACTCTTGACGCATAGATTAAGCCCACTGAAGGTGGGTAATTGGTTGACCCCTTTATCTTTGGTGATTTTTGTTTTGTTATAAATTGTTCGGCTAGTTATTCCTTGTCCTTGAAATCAACGTTTATGATCTAAAACCAAGTAACCATATGGTACTTGAGGTCCATTGGTTTTTTTTTTTTTTAAATTCATATAGCCTCTATTCCTCCCTCTTGAGAAATTGGAGATATCTTTTGCAACTCCAATGGTTCAGGCAATATGCCCCCTCTTTTGCAAATTTCATACATCAATAAAACTTGTTTCTTGTAATTATATAACCTTTCAATTTTTGTGGTAAAAACGTTAATCTTCCTCATGGGCACCATCCATTAAGTTGGAAATGTTTATAAGTTAACATTTTGGCTTTGGAGCTTGACGTCTTCTTTTGTAATTTTGCAACTCCTCTCCATTGCTTCATAATATTGAATCCACAAATCTGGGATTTCTGCTATAGTTTTGATGTTGTGTCATTAACCTCTAAAATGATTCATTTATGGTCTGAAGCGCTGTTCTTTGCAATTTTCTTAAACAAAATTTATTTTAACGTCTTCTTGTTTAACAGGTTTGCCTTCCATCTATTGTTGAGGAATTTCTTCGGCAGGCAAAAGTTGCAAATTTATTTACACCGTCGGAGACTTTTATATTCAATGGTTTGCTGGAGTCTGACTATTCAAGAAGTTTTGGTGGATTAGAAAGGCTCGACATGTTTTTTCCGTTTGATCCTTGCTTATTAAAAAAATGTGACAGGTATGTACTCTTATTGTTAATCTTCTTTATTTCCTTTTCAAGACAACAAAGGATAGATGGATCATAGAACCATTATAAATATGAACACACGCAAAAGAATTTATAAAATGATTCTGCCTGCTCATTGTGGCTATGCTTTATATTCAAAATGATTGATTGGTAAGAGTGAGTACGCTTGAGAATGTGAAGGTGTACGGATGTTTTGTTTGACTTTTCGTTTGAATTATTAACTCATGCTTTGTTGTTCCTCTTTGTTTATGAAGATATCTTCGACCACATTTTGTATACTGGTCGATGGTCAGACCTACCTATGCCGAAGAAGAAGAAGAAGAAGAAGACGATGGAGGTAGCAGTGATGAAGATGCAGAGATTTTTCCAGATAGAATTGATGAAAACCTTATGGATGATGAAGCAATGGCAAGAAGCTACGACGACCAAGATTTCGATCTTGATTCAGGATTAAACAAAATGTCCATCACACCAAGAAATTCACTTCAGTACCGGTGTGATTTTGTTCAGATGCCCTCGAGAATCCGACCCTCGACGAGTCCAGAATTTTTTTGATAACATATCTCAGCTTGAATAGTTAAATGGAATGCAAATGAGAATGGCGCTGGGGCAGAGGCATATTTCCATGAACATAGTGATTGCAAATCTAGGTTGGGTTTTTTGGGTTTGTCGTTGTTTACCTAAAATGTATGATAAATAGGTGGGTTAGAATTGTTGGTTGGGGGTGGGTTCAGTTTTGAATTATTCCTTTTTCTAGCTTTGCAGCGCTTTGATTATTGCCCTTGTGATTCTTTACACTCCAGGCTTGTAATAGTTTTAGTAAGTCATCAAATACTGCCAAAATTTGTACACTTCTGAGTGATACATGTACAAGTAAAAGTTTTCATTGTAATTCAAACCCATCCAATTAGGCTTTCTTGCTTTTTCAGCCTTCACCCTTTAAGATCATGATATCACAACTCTCCCCTTAATAGTTGGTCCCTGTGCTTCGCCTTCACTCTGCCACACATGCGTTCACAGTTCGTTTTATTATCAACAATTATTTTAAAAGCTATAATAAACTCGTTTTATTATCAACAATTATTTTAAAAGCTACAATAAACTTACGAAACCAAAGGTTTAAAAGTTTTTTCAATATATAAGTATTTAAAATAAAATTTAAAAGAACTTAAAAGGGAAGTTTTAAGTCTATTTTTAAGAACTTATGACTTAAAAAAATATATTTTGAAAATTCAACAATTAAATGTACTTATTCCTCTAAATTTGAAGATTAAAAAAATGTATATTTTAAATAGATATTTTTTTCATGATAAACTATTTACAAAATTTATTATTTTCCTGTATTTTGTCAAATGTTCTATTTTTTATAATTTTTTTTTTAAAGTTTATAATTAATTTATATATAAAAAAAAAACATAAACTAAACGCACTTCTCATTGTTTAGAACTAATAACACTCATTGTTTAGATTTTAGAACTTGAAAAAATAAATCAGCCACAAAATATGATATATTATAATTATAATTGGTGACAATTTTATGAATACTAATTAAATATATATGAACATTTTAAATGAATTGCAAATATAACAAAATCTATACGTGATAGACTTGCACTCTTTATGGTCTATCAATTTTTGCATTTTACTATATTTGTAATTTTTTAAAAACATTACTATAATACTTAAAAAGAGTCTTTAACTAGAATAGCCTAAAATAGTATACCATATTATAAAATTGATCTAAATTTTCTAAATTTTTCAGAAGTATCATAAATTAACTAATATTTTACACAAATATAAGAATCTTTATTATTAATAATATATTAACAAAATAGAAAAATTAAAAAGAAAAGTAGACCGCATGATTAATATTTGTATTTAATAGATATTCTTATGGTAATATAGTAAGTGATTAATTATATGGTAATATTATAATAAAAATTTTCCAATTAGTATATTTACGACTATCAATTATCCATCCGGCCTATAGGCTACCCAATTTATAATGGGCCGTTAATTCGGCCCAAACCGGAATCACGTTTGCCGTTTCCCGCCATTGTTCAGTTCACTTCTTACTACTTATTCCCATATTTTGTCATTTGAGCTTTAACAACCTTCAAGCTTGGAAATCCTTCTCATTTCAATACTGCATGCAAAACAATTGTTGGTTGCGATCGATCCACAATCGTTCTTCCATAGCTCGATCGACCAGTCGAAGAGTTTTTGGCTTCTCAGTTCTCGCTCAGAGAGTGTTTCTATCAAATGCGGCTGAAGATAAACAAGGCCTGTGATCTCAGTTCTATCTCCGTTCTTCCTCCTCAGTCCAGGCATGAATCTGTTCTTAATTATTTATAGCGTTATATTCTGTTTTAATTGCAAGAGTTCATGGAGAACAATGCGCAAAGAAGTTTAGGTTGCAATGCTGTTCATATTCTGTAGCTTGACAATTTCTTAACAAAAATGTTTCATGTTGTTTATTGTGTTATTCGTTTTGGAAGATATGGATTTCCTTTTCATCTTAGCTGCGTTTTTTATGATACGGAAGCAATTTGCTATCCCCGAGCTTTTAAGAGATTGATATTTTAAATATTTCTTACTGACAGAGACTTCGAAACTGATATTTACACGCATCTTAGTTTGATTCGTTCTATATTTTTATCGATACATTATTCAGTTACTTTAAGTTTGGATAAAAAGAACAGATGAGTAAGAACATGAAGTTTTCAGACTATAATCTTATCATGAAATTGCAAGCGAGTACGCTGCAAATTTGATCCAATCTTTTGAGTTTGACGTCATTATTTTCAATTCTGTTCAACGCAAAAATATTCAAGAAAAATACGTAAGTTTCTTCAATGATGAAAATGTGAATGGTCTTGAAAATCTGTAGAAGGTTAAATGCGTTAACGACTGGGCAGCAAGCATCACAGTTGCGATCACAACCTTCGCAACAATCCTTTTCTCAGGGATTGTCATCTCAGCACGGCATGTATTCTCAACTTTCTCAGAACTCTTTTGACGAAGTCGTGACAAATGAACAGGTCAATCTCGGTTCTTGTCTAGACTCTGGATTTAGGACTTTGTTTGTCCATTAAGAAATTAAGGAAATGACACTAAAATGATCTGGCTCTTTATCATTCAATGCGTATTAGCATTGAAGACAAAACTTGGATATGGTTATTTTCATTGTTTAGGAATCACTTATGAATTTTATTTTATTATCTATTTTTTGACGTATAATCTACCAAAAAAAGAAAAGAAAAGGAAACTATCTCTTGAGTTCTTAAATCTATTTTTGTTTTCATCTCCTCTTATGAATTAACTTTGATGTACGATTCTTTTTGGCAGAGATTTAGCTCTCAAGACCGAGAAAACTCAATTAAGAAGAATTCCTTTTTTCCTCCTCTAAGTTACTCCAAAGAAGATTGTCAATTGGGAATCTCTAAATCTTCAAACAGTTTAACACAAAAATGGAGACCTAGTCCTCTTCCGGACTCTAAGTGTAAGTTCATTCTCTTGGACTCCTATAGCGGACTCTAACTATTTCAATAAGTTCGGTTGAATCCGTTACAGCATGGTATAACAGTTTGTGTAGGGTAAGTTGATGAACTGCCATTTCTTATAACCTTGATATCTTTTCTGTGACTTAGTTTCATAATTTAGCTTTCTTTTTCAGGTCAAGTTGGTGAAGAACTTGACCGCCGCCTTGGAACTATAGAAAACTCATTAAACAAGTTTGGAAAAATCTTGGATTCTCTTCTCAGTGACATCTTACAACTAAACAAAGGAATGAAGCAAGTTTCTCTGGATGGTGAGCTTTGCAATCCCTCAAGCTGAAAAGTAAAATTAGAAGAGAAACTATGTATTAGTATTACTGCTTGAAAAACACTTTCTCCATTGAAACCCGATGTGTTTGTTACTGAAGTAGGAAAACGGTGATGAATACGCTTTATTTGAATTTCATTCCTTCAAAAAGTAGATTAAGATTTCTTAGCTATGAATGTGAAAAGGGGAGAGTGCCCAAATCAGTACAGAATCCCGACCAATTTAAAGCTTCAAGGCCAAAAGTTTATTCAAATAAAATGCTTGTTTTTCAAATTGCAGTGGAAAGCATATGGCAAAAGATGCTTGTTAACAGTAGCTCGCTGCAATCCATGGTAAAATTGTATTAGATCAATGCAATATTTTATTGACCACTAAGTTTCTTTAATTGTAATCGTAATATCTAAATTGTGCATTCAACTAACGAGTGCAAATTTCAATGTCAGAACAAAGACCACGATGACATGAAAGCTATCATCGATGGAGGCTTCAAATTGATATCCGATCAACTTAAGAAGGATGCATACCAAGAAAGGTTGCATGAGATTTCGGATTTTCTTTCTTCATTGGAAAAGCAAGTACAAGCTTCTCAACTTAAATTAAAAAATGACTTCATCAGCACATTCACCAAAGAAATGAAGGTAATTGCATATTCTATCAAATATTTCTATAGCCTATAAATATAGCATTGAATAAAAAAATTGGTATAAATATACGCTAAAAAGGATTTGCCTCCTAACTCCATTACAGCAAGTGTGTGTGTATTTGTAAAAGTACCCTGCCTTAATTTGTATTCTTGTTTTAATATCTCATCTCAAGTAAATGAAACATTGCAGTCACGTATTCTTTGTTAACTTGTAGGCAATGATCTCTACCTTGAAGAACCCCTTGCAGAAATTTCCACCTCACTCTATTCAATCTCCCGAGGTTCAGTTTTTTACTAAATATCTATCATATGTCTAAGGCACTTGTTACGTCCTGAACTATTTCTCATGGAAGGCTTTAATTGCAAATGTCAGAGTAATGCTTGTTTGGATGCTCCAAAGCAGAAGCAACGTCGATGTAAAATGTATGAATCTCAGTTTTCATTTCATAATAACTAGCTTGATTTCTTGGGTTTCTATGCCTTCCATACGCAGAAAGATATCATATCTTAATGCATGAATTACTGATAAGATAATGGTGAGCGGGTTTAGATTGAATTGATGCATTCCAATCTGCGAGTTCAACTTTCCCTTCTAATGCACAAAATGTAAAATTTCATTGCAGTTTATGACATTTAGTAACCTACAAAAGCTCAATGGTTTCTTCCATTCCCCTATATTTTCTGGCTCTGATATATGATAGTCTTGAAGTTCTCAATGGAATTATGGCATTATATTTCATAAAATACAATCATATTGCGTAGAGAGGCGAGGAGGAAAGAATTTTTCATTTGTCAACAATGTTATCTTATTGTGGCATGAAATTAATGAACTATGGAATTATACTTATTTGTTCTTTGTTGCTTAGCATCTTAAGTGAACTTACATTTTTCCACTTTATAACAGTCAATCTGCGGCTCCAAATGTTTGCACTCAAGCAACTGCAGTGCAAAAGGAGGAAGTAGGAATGTGGAAATCAGTAAAAGTGGGAAAGGCGTTTTGCACTAGCAGTGTGGTGAAAAGGGATGATCCAAATAAAGTAATTCCATTTTCTGAACAGGTAGCTATTTAAATTTTATTATTTTTCCTGCTATCACATTACCATTTATTGCGGAAATTGTGTAATTGTATTTTTTAAAGCCAATATTAAGCTATTCCTTGATTATTAAATCCGAAATTTACACATTATTCTATGAAGCAAATAAAGATTTCAACTTGAATATTAGCAGCAGTGCCTGGTGCTAGAAAGGGAATATAGAGTTATTGTTGATTCCGATGAGGAGATTGAAAGAAGTTTCTCCTGCTTAATTGAAGAGAAGAAAACAGGTGATTCCTGCAAAATAAAGACACTTCTAGATAATATAAATTGTGTAAATTTAAATACGCCAATCATATCTTCTTCACATGCAAATAGAGTAGCATGTAACTCATATGAGAAATGAACAAGACGGAACAAAAAAATAATGACGTGATGTAACTATTAGAAGGAAAAGAAAATAATATATGGCTCGGCTGACCTCCATAAAATATTATTATTTGTTATTTTATATTTATTCTATTCATTTCAAGTGCTCAGAACCTTCTTAGAAGGATAAGATTCTGATTTTTGGTAGAGTAGGTTATATAAGATTTGAGTCTATTTTAGATTAGCCTAACCGAAATTATCTTCAATTTTAGATTCAATAAAACCACCCACAGTGCTCAGCAGCATCTGACTGCTAAAAAGGAGAGAAGCAGCTTGACCATTTATTGAGGCAGTCAGACGTAGTTAAGATGTGTCTGGGTTTTTGCAACTGTAGATATGTTGGACACGAGTTCAGGGAAAGTTTGTCTCCCCTAGATATTGGAAACTGGTGCAGGAGGATTAG

mRNA sequence

ATGGGGGCAGAACTTGAAAATAATCAAGCTCAGTTGCACGCTATGGAGGATATTAATCTCACAGATGCCCAGTTAGTTGATTTCATTAGGGGTTTTCTTAGTTCAGTGTCACTGGGAGATATCGATGGGTATAACCAGCTTGTGGGTGTTATACACCACAGGGATCGACTATCTCCCGACGAGGTTGCCTTGCTCGTGACATGTTTGAAGGCACTATCTGGAGCAGTTTCTTGTATAGATATCATTCTCCATGAATCACTGCTTGCAGCAATTTTTAAAATGAGCTTGTGGGATTATGGACCTAATGTGATGGATGCCCTGATTGAACTAATAATATCCCTGGCTGTTTCAAATGGAAAATATGTGGATTCATGCTTGGATATGCTTGTAAATAACTTCATGCCGCCCAATTCCTACATGGATTTCCTGAAGAAACCACATGGTCTTACCATAAAGGAGGAAGTTCTTTCTCGAGTGCACACAGCTCTAAAAGATATATCGGACTTGGTGCCTCTTGCACCGTTGAGACTGGAGCAGAAAGTTGTCCATAAAATGCAAAGAGTCTTTTTCAATGAATCTTTGACCACGATATATGTGGAAAACATGTTGAGGTTGGAAAAGGGTGCATTGAGTGAATTTGTTGGGAGAAAGATCTTAACTGCGCTGGTGGATAAGCTTCTAGATTTGGATGTGGAGATTGGATGGGATGATATCCTAAAAGACGATTTCAGTAAAGGAATTTTTGAGATGGAACTTGAAGATGACGACGACACTACAGATGATATTAATGAGGATTCTAGTGAGCTTCCAAGAGAACTAAGCCGTAGAAGCTTAGGTGGAAATGTAATTGCTGAAACGTTAGATAGCTTGATTGTTCTAACATTTGAACATCTTGAATCATGTGAACGTGATGGACGATTGAATGAGGTTTTTGACATTTTACTCCTATCATTCCAAAGAACTGTTCTGACTGCTTACAAGTCTAAATTTGCTCAGTTTATCGTGTTCTATGCTTGTTCATTAGATCCTGAAGTTTGTGGTGCGAGATTTGCCGTTTCTCTGGCTGATATGTTTGTTTCCTGCAATGATCCTCCGCTTATCAGGATGAGTGCTGTTTCATATCTTGCTAGTTTCTTATCTCGTGGGAAGTTTTTGACAACCTCTTTGGTTACAACTATATTGAAAAGACTGGTGGATTGGTGTTTAGAATATGGCAAAACACTGAATGTTGACCCGAACCCAAAGGCTCATAAAGTATTTTATTCTGGTTGCCAGGCCATAATGTATGTGCTTTGCTTCCGGATGAGGTCCATTTTGGAAATTCCACGTCTGAAGTCCCAACTTCTGCTTATGCCCATAGGTCCACTCTTGACGCATAGATTAAGCCCACTGAAGGTTTGCCTTCCATCTATTGTTGAGGAATTTCTTCGGCAGGCAAAAGTTGCAAATTTATTTACACCGTCGGAGACTTTTATATTCAATGGTTTGCTGGAGTCTGACTATTCAAGAAGTTTTGGTGGATTAGAAAGGCTCGACATGTTTTTTCCGTTTGATCCTTGCTTATTAAAAAAATGTGACAGAATTGATGAAAACCTTATGGATGATGAAGCAATGGCAAGAAGCTACGACGACCAAGATTTCGATCTTGATTCAGGATTAAACAAAATGTCCATCACACCAAGAAATTCACTTCAGTACCGAAGGTTAAATGCGTTAACGACTGGGCAGCAAGCATCACAGTTGCGATCACAACCTTCGCAACAATCCTTTTCTCAGGGATTGTCATCTCAGCACGGCATGTATTCTCAACTTTCTCAGAACTCTTTTGACGAAGTCGTGACAAATGAACAGAGATTTAGCTCTCAAGACCGAGAAAACTCAATTAAGAAGAATTCCTTTTTTCCTCCTCTAAGTTACTCCAAAGAAGATTGTCAATTGGGAATCTCTAAATCTTCAAACAGTTTAACACAAAAATGGAGACCTAGTCCTCTTCCGGACTCTAAGTGTCAAGTTGGTGAAGAACTTGACCGCCGCCTTGGAACTATAGAAAACTCATTAAACAAGTTTGGAAAAATCTTGGATTCTCTTCTCAGTGACATCTTACAACTAAACAAAGGAATGAAGCAAGTTTCTCTGGATGTGGAAAGCATATGGCAAAAGATGCTTGTTAACAGTAGCTCGCTGCAATCCATGAACAAAGACCACGATGACATGAAAGCTATCATCGATGGAGGCTTCAAATTGATATCCGATCAACTTAAGAAGGATGCATACCAAGAAAGGTTGCATGAGATTTCGGATTTTCTTTCTTCATTGGAAAAGCAAGTACAAGCTTCTCAACTTAAATTAAAAAATGACTTCATCAGCACATTCACCAAAGAAATGAAGGCAATGATCTCTACCTTGAAGAACCCCTTGCAGAAATTTCCACCTCACTCTATTCAATCTCCCGAGAGTAATGCTTGTTTGGATGCTCCAAAGCAGAAGCAACGTCGATGTAAAATTCAATCTGCGGCTCCAAATGTTTGCACTCAAGCAACTGCAGTGCAAAAGGAGGAAGTAGGAATGTGGAAATCAGTAAAAGTGGGAAAGGCGTTTTGCACTAGCAGTGTGGTGAAAAGGGATGATCCAAATAAAGTAATTCCATTTTCTGAACAGATATGTTGGACACGAGTTCAGGGAAAGTTTGTCTCCCCTAGATATTGGAAACTGGTGCAGGAGGATTAG

Coding sequence (CDS)

ATGGGGGCAGAACTTGAAAATAATCAAGCTCAGTTGCACGCTATGGAGGATATTAATCTCACAGATGCCCAGTTAGTTGATTTCATTAGGGGTTTTCTTAGTTCAGTGTCACTGGGAGATATCGATGGGTATAACCAGCTTGTGGGTGTTATACACCACAGGGATCGACTATCTCCCGACGAGGTTGCCTTGCTCGTGACATGTTTGAAGGCACTATCTGGAGCAGTTTCTTGTATAGATATCATTCTCCATGAATCACTGCTTGCAGCAATTTTTAAAATGAGCTTGTGGGATTATGGACCTAATGTGATGGATGCCCTGATTGAACTAATAATATCCCTGGCTGTTTCAAATGGAAAATATGTGGATTCATGCTTGGATATGCTTGTAAATAACTTCATGCCGCCCAATTCCTACATGGATTTCCTGAAGAAACCACATGGTCTTACCATAAAGGAGGAAGTTCTTTCTCGAGTGCACACAGCTCTAAAAGATATATCGGACTTGGTGCCTCTTGCACCGTTGAGACTGGAGCAGAAAGTTGTCCATAAAATGCAAAGAGTCTTTTTCAATGAATCTTTGACCACGATATATGTGGAAAACATGTTGAGGTTGGAAAAGGGTGCATTGAGTGAATTTGTTGGGAGAAAGATCTTAACTGCGCTGGTGGATAAGCTTCTAGATTTGGATGTGGAGATTGGATGGGATGATATCCTAAAAGACGATTTCAGTAAAGGAATTTTTGAGATGGAACTTGAAGATGACGACGACACTACAGATGATATTAATGAGGATTCTAGTGAGCTTCCAAGAGAACTAAGCCGTAGAAGCTTAGGTGGAAATGTAATTGCTGAAACGTTAGATAGCTTGATTGTTCTAACATTTGAACATCTTGAATCATGTGAACGTGATGGACGATTGAATGAGGTTTTTGACATTTTACTCCTATCATTCCAAAGAACTGTTCTGACTGCTTACAAGTCTAAATTTGCTCAGTTTATCGTGTTCTATGCTTGTTCATTAGATCCTGAAGTTTGTGGTGCGAGATTTGCCGTTTCTCTGGCTGATATGTTTGTTTCCTGCAATGATCCTCCGCTTATCAGGATGAGTGCTGTTTCATATCTTGCTAGTTTCTTATCTCGTGGGAAGTTTTTGACAACCTCTTTGGTTACAACTATATTGAAAAGACTGGTGGATTGGTGTTTAGAATATGGCAAAACACTGAATGTTGACCCGAACCCAAAGGCTCATAAAGTATTTTATTCTGGTTGCCAGGCCATAATGTATGTGCTTTGCTTCCGGATGAGGTCCATTTTGGAAATTCCACGTCTGAAGTCCCAACTTCTGCTTATGCCCATAGGTCCACTCTTGACGCATAGATTAAGCCCACTGAAGGTTTGCCTTCCATCTATTGTTGAGGAATTTCTTCGGCAGGCAAAAGTTGCAAATTTATTTACACCGTCGGAGACTTTTATATTCAATGGTTTGCTGGAGTCTGACTATTCAAGAAGTTTTGGTGGATTAGAAAGGCTCGACATGTTTTTTCCGTTTGATCCTTGCTTATTAAAAAAATGTGACAGAATTGATGAAAACCTTATGGATGATGAAGCAATGGCAAGAAGCTACGACGACCAAGATTTCGATCTTGATTCAGGATTAAACAAAATGTCCATCACACCAAGAAATTCACTTCAGTACCGAAGGTTAAATGCGTTAACGACTGGGCAGCAAGCATCACAGTTGCGATCACAACCTTCGCAACAATCCTTTTCTCAGGGATTGTCATCTCAGCACGGCATGTATTCTCAACTTTCTCAGAACTCTTTTGACGAAGTCGTGACAAATGAACAGAGATTTAGCTCTCAAGACCGAGAAAACTCAATTAAGAAGAATTCCTTTTTTCCTCCTCTAAGTTACTCCAAAGAAGATTGTCAATTGGGAATCTCTAAATCTTCAAACAGTTTAACACAAAAATGGAGACCTAGTCCTCTTCCGGACTCTAAGTGTCAAGTTGGTGAAGAACTTGACCGCCGCCTTGGAACTATAGAAAACTCATTAAACAAGTTTGGAAAAATCTTGGATTCTCTTCTCAGTGACATCTTACAACTAAACAAAGGAATGAAGCAAGTTTCTCTGGATGTGGAAAGCATATGGCAAAAGATGCTTGTTAACAGTAGCTCGCTGCAATCCATGAACAAAGACCACGATGACATGAAAGCTATCATCGATGGAGGCTTCAAATTGATATCCGATCAACTTAAGAAGGATGCATACCAAGAAAGGTTGCATGAGATTTCGGATTTTCTTTCTTCATTGGAAAAGCAAGTACAAGCTTCTCAACTTAAATTAAAAAATGACTTCATCAGCACATTCACCAAAGAAATGAAGGCAATGATCTCTACCTTGAAGAACCCCTTGCAGAAATTTCCACCTCACTCTATTCAATCTCCCGAGAGTAATGCTTGTTTGGATGCTCCAAAGCAGAAGCAACGTCGATGTAAAATTCAATCTGCGGCTCCAAATGTTTGCACTCAAGCAACTGCAGTGCAAAAGGAGGAAGTAGGAATGTGGAAATCAGTAAAAGTGGGAAAGGCGTTTTGCACTAGCAGTGTGGTGAAAAGGGATGATCCAAATAAAGTAATTCCATTTTCTGAACAGATATGTTGGACACGAGTTCAGGGAAAGTTTGTCTCCCCTAGATATTGGAAACTGGTGCAGGAGGATTAG

Protein sequence

MGAELENNQAQLHAMEDINLTDAQLVDFIRGFLSSVSLGDIDGYNQLVGVIHHRDRLSPDEVALLVTCLKALSGAVSCIDIILHESLLAAIFKMSLWDYGPNVMDALIELIISLAVSNGKYVDSCLDMLVNNFMPPNSYMDFLKKPHGLTIKEEVLSRVHTALKDISDLVPLAPLRLEQKVVHKMQRVFFNESLTTIYVENMLRLEKGALSEFVGRKILTALVDKLLDLDVEIGWDDILKDDFSKGIFEMELEDDDDTTDDINEDSSELPRELSRRSLGGNVIAETLDSLIVLTFEHLESCERDGRLNEVFDILLLSFQRTVLTAYKSKFAQFIVFYACSLDPEVCGARFAVSLADMFVSCNDPPLIRMSAVSYLASFLSRGKFLTTSLVTTILKRLVDWCLEYGKTLNVDPNPKAHKVFYSGCQAIMYVLCFRMRSILEIPRLKSQLLLMPIGPLLTHRLSPLKVCLPSIVEEFLRQAKVANLFTPSETFIFNGLLESDYSRSFGGLERLDMFFPFDPCLLKKCDRIDENLMDDEAMARSYDDQDFDLDSGLNKMSITPRNSLQYRRLNALTTGQQASQLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSKEDCQLGISKSSNSLTQKWRPSPLPDSKCQVGEELDRRLGTIENSLNKFGKILDSLLSDILQLNKGMKQVSLDVESIWQKMLVNSSSLQSMNKDHDDMKAIIDGGFKLISDQLKKDAYQERLHEISDFLSSLEKQVQASQLKLKNDFISTFTKEMKAMISTLKNPLQKFPPHSIQSPESNACLDAPKQKQRRCKIQSAAPNVCTQATAVQKEEVGMWKSVKVGKAFCTSSVVKRDDPNKVIPFSEQICWTRVQGKFVSPRYWKLVQED*

Homology

[Close]

BLAST of Chy6G106970 vs. ExPASy Swiss-Prot
Match: Q0WWX5 (Putative recombination initiation defects 3 OS=Arabidopsis thaliana OX=3702 GN=PRD3 PE=1 SV=2)

HSP 1 Score: 194.5 bits (493), Expect = 5.2e-48
Identity = 131/370 (35.41%), Postives = 213/370 (57.57%), Query Frame = 0


Query: 553 LNKMSITPRNSLQYRRLNALTTGQQASQLRSQPSQQSFSQGLSSQH---GMYSQLSQNSF 612
           L  +S+ P N      L      Q + QLRSQ SQQSFSQG SS     G +SQ++Q+S 
Sbjct: 11  LKSISVFPPN------LRRSAEPQASQQLRSQQSQQSFSQGPSSSQRGCGGFSQMTQSSI 70

Query: 613 DEVVTNEQRFSSQDRENSIKK-NSFFPPLSYSKEDCQLGISKSSNSLTQKWRPSPLPDSK 672
           DE++ N+QRFSSQ+R+ S+KK +S  PP+++ +ED QL  S+SS+ L+++W  + + +SK
Sbjct: 71  DELLINDQRFSSQERDLSLKKVSSCLPPINHKREDSQLVASRSSSGLSRRWSSASIGESK 130

Query: 673 CQVGEELDRRLGTIENSLNKFGKILDSLLSDILQLNKGMKQVSLDVESIWQKMLVNSSSL 732
            Q+ EEL++R G +E SL++FG +LDS+ SDI+Q N+G K+V L+ E I QK+ +  +SL
Sbjct: 131 SQISEELEQRFGMMETSLSRFGMMLDSIQSDIMQANRGTKEVFLETERIQQKLTLQDTSL 190

Query: 733 QSMNKDHDDMKAIIDGGFKLISDQLKKDAYQERLHEISDFLSSLEKQVQASQLKLKNDFI 792
           Q + K+  D KA +DGG K I ++  KD  QE+L +I   L+++ +QV+ +  K++ +  
Sbjct: 191 QQLRKEQADSKASLDGGVKFILEEFSKDPNQEKLQKILQMLTTIPEQVETALQKIQREIC 250

Query: 793 STFTKEMKAMIS-TLKNPLQKFPPHSIQSPESNACLDAPKQKQRRCKIQSA----APNVC 852
            TFT+E++ + S     P  + P     +P+  A  + P+Q+ +  K+ ++     P V 
Sbjct: 251 HTFTREIQVLASLRTPEPRVRVP----TAPQVKAKENLPEQRGQAAKVLTSLKMPEPRVQ 310

Query: 853 TQATAVQKEEVGMWKS-VKVGKAFCTSSVVKRDDPNKVIPFSEQICWTRVQGKFVSPRY- 909
             A    KE     +  V    +FC ++ +K   P    P +      R    ++SP+  
Sbjct: 311 VPAAPQAKENFPEQRGPVAKSNSFC-NTTLKTKQPQ--FPRNPNDASARAVKPYLSPKIQ 367

[Close]

BLAST of Chy6G106970 vs. ExPASy Swiss-Prot
Match: B2RS91 (RNA polymerase I-specific transcription initiation factor RRN3 OS=Mus musculus OX=10090 GN=Rrn3 PE=1 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 1.2e-33
Identity = 132/481 (27.44%), Postives = 213/481 (44.28%), Query Frame = 0


Query: 85  ESLLAAIFKMSLWDYGPNVMDALIELIISLAVSNGKYVDSCLDMLVNNFMPPNSYMDFLK 144
           E L+  I ++   +    V++  +  + +L  +   ++  CL M+ ++F+PP      + 
Sbjct: 105 EQLINIILRLPWLNRSQRVVEEYLAFLGNLVSAQTVFLRPCLSMIASHFVPPR----VIV 164

Query: 145 KPHGLTIKEE---------VLSRVHTALKDISDLVPLAPLRLEQKVVHKMQRVFFNESLT 204
           K  G+ + +          +    H AL+ I+  VP  P  L   +V K   V  +E   
Sbjct: 165 KEGGIDVSDSDDEDDNLPAIFDTCHRALQIITRYVPSTPWFLMPILVEKFPFVRKSERTL 224

Query: 205 TIYVENMLRLEKGALSEFVGRKILTALVDKLLDLDVEIGWDDILK-----------DDFS 264
             YV N+LR+        + R+IL  +++KLL LDV +   DI              D +
Sbjct: 225 ECYVHNLLRI--SLYFPTLRREILELVIEKLLKLDVSVSRQDIEDAEEKAAQTCGGTDTT 284

Query: 265 KGIFEMELEDDDDTTDDINEDSSELPRELSRRSLGGNVIAETLDSLIVLTFEHLES-CER 324
           +G+F M   D+D+ TD   +   E P +++  +      AE LD L+ L   ++E  C  
Sbjct: 285 EGLFNM---DEDEDTDPEKKADQEQPNQMAHPT------AERLDVLLCLLLSYIEDVCRV 344

Query: 325 DGRLN-----EVFDILLLSFQRTVLTAYKSKFAQFIVFYACSLDPEVCGARFAVSLADMF 384
            G+++     +++  L+  F + +L  + S   QF +F+ CS       A F   L    
Sbjct: 345 HGKIDNNKTKDLYRDLISIFDKLLLPTHASCHVQFFMFFLCSFKLGFAEA-FLEHLWKKL 404

Query: 385 VSCNDPPLIRMSAVSYLASFLSRGKFLTTSLVTTILKRLVDWCLEYGKTLNVDPNPKA-- 444
              N+P +IR +A +Y+ SFL+R KF+    V T L  LV+W   Y    N D   KA  
Sbjct: 405 QDPNNPAIIRQAAANYIGSFLARAKFIPLITVKTCLDLLVNWLHMY--LTNQDSGTKAFC 464

Query: 445 ----HKVFYSGCQAIMYVLCFRMRSIL--EIPRLKSQLLLMPIGPLLTHRLSPLKVCLPS 504
               H  FYS CQA+ Y + FR + +L   + +    L  +    ++  +L+PLK+CLP 
Sbjct: 465 DVALHGPFYSACQAVFYTVVFRHKQLLSGNLKQGLQYLQSLNFERIVLSQLNPLKICLPQ 524

Query: 505 IVEEFLRQAKVANLFTPSETFIFNGLLESDYSRSFGG-------LERLDMFFPFDPCLLK 525
           +V  F        L         N        RS  G          LD FFPFDPC+LK
Sbjct: 525 VVNFFAAITNKYQLVFCYTIMERNSRQMLPVIRSTAGGDSVQTCTNPLDTFFPFDPCVLK 567

[Close]

BLAST of Chy6G106970 vs. ExPASy Swiss-Prot
Match: Q5R4N9 (RNA polymerase I-specific transcription initiation factor RRN3 OS=Pongo abelii OX=9601 GN=RRN3 PE=2 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 9.2e-29
Identity = 132/482 (27.39%), Postives = 212/482 (43.98%), Query Frame = 0


Query: 85  ESLLAAIFKMSLWDYGPNVMDALIELIISLAVSNGKYVDSCLDMLVNNFMPPNSYMDFLK 144
           E L++ I ++  W     V++  +  + +L  +   ++  CL M+ ++F+PP      + 
Sbjct: 107 EQLISIILRLP-WLKSQTVVEEYLAFLANLVSAQTVFLRPCLGMIASHFVPPR----VII 166

Query: 145 KPHGLTIKEE---------VLSRVHTALKDISDLVPLAPLRLEQKVVHKMQRVFFNESLT 204
           K   + + +               H AL+ I+  VP  P  L   +V K   V  +E   
Sbjct: 167 KEGDVDVSDSDDEDDNLPANFDTCHRALQIIARYVPSTPWFLMPILVEKFPFVRKSERTL 226

Query: 205 TIYVENMLRLEKGALSEFVGRKILTALVDKLLDLDVEIGWDDILK-----------DDFS 264
             YV N+LR+        +  +IL  +++KLL LDV     DI              D +
Sbjct: 227 ECYVHNLLRI--SVYFPTLRHEILELIIEKLLKLDVNASRQDIEDAEETATQTCGGTDST 286

Query: 265 KGIFEMELEDDDDTTDDINEDSSELPRELSRRSLGGNVIAETLDSLIVLTFEHLES-CER 324
           +G+F M   D+D+ T+    ++   P  L +     + +AE LD L+ L   +++  C  
Sbjct: 287 EGLFNM---DEDEETE---HETKAGPERLDQMV---HPVAECLDILMSLVLSYMKDVCYV 346

Query: 325 DGRLN-----EVFDILLLSFQRTVLTAYKSKFAQFIVFYACSLDPEVCGARFAVSLADMF 384
           DG+++     +++  L+  F + +L+ + S   QF +FY CS       A F   L    
Sbjct: 347 DGQVDNGKTKDLYRDLINIFDKLLLSTHASCHVQFFMFYLCSFKLGFAEA-FLEHLWKKL 406

Query: 385 VSCNDPPLIRMSAVSYLASFLSRGKFLTTSLVTTILKRLVDWCLEYGKTLNVDPNPKA-- 444
              ++P +IR +A +Y+ SFL+R KF+    V + L  LV+W   Y    N D   KA  
Sbjct: 407 QDPSNPAIIRQAAGNYIGSFLARAKFIPLITVRSCLDLLVNWLHIY--LNNQDSGTKAFC 466

Query: 445 ----HKVFYSGCQAIMYVLCFRMRSILEIPRLKSQLLLMP---IGPLLTHRLSPLKVCLP 504
               H  FYS CQA+ Y   FR + +L    LK  L  +       ++  +L+PLK+CLP
Sbjct: 467 DVALHGPFYSACQAVFYTFVFRHKQLLS-GNLKEGLRYLQSLNFEWIVMSQLNPLKICLP 526

Query: 505 SIVEEFLRQAKVANLFTPSETFIFNGLLESDYSRSFGG-------LERLDMFFPFDPCLL 525
           S+V  F        L         N        RS  G          LD FFPFDPC+L
Sbjct: 527 SVVNFFAAITNKYQLVFCYTIIERNNRQMLPVIRSTAGGDSVQTCTNPLDTFFPFDPCVL 568

[Close]

BLAST of Chy6G106970 vs. ExPASy Swiss-Prot
Match: Q9NYV6 (RNA polymerase I-specific transcription initiation factor RRN3 OS=Homo sapiens OX=9606 GN=RRN3 PE=1 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 6.0e-28
Identity = 129/481 (26.82%), Postives = 212/481 (44.07%), Query Frame = 0


Query: 85  ESLLAAIFKMSLWDYGPNVMDALIELIISLAVSNGKYVDSCLDMLVNNFMPPNSYMDFLK 144
           E L++ I ++   +    V++  +  + +L  +   ++  CL M+ ++F+PP      + 
Sbjct: 107 EQLISIILRLPWLNRSQTVVEEYLAFLGNLVSAQTVFLRPCLSMIASHFVPPR----VII 166

Query: 145 KPHGLTIKEE---------VLSRVHTALKDISDLVPLAPLRLEQKVVHKMQRVFFNESLT 204
           K   + + +               H AL+ I+  VP  P  L   +V K   V  +E   
Sbjct: 167 KEGDVDVSDSDDEDDNLPANFDTCHRALQIIARYVPSTPWFLMPILVEKFPFVRKSERTL 226

Query: 205 TIYVENMLRLEKGALSEFVGRKILTALVDKLLDLDVEI---GWDDILK--------DDFS 264
             YV N+LR+        +  +IL  +++KLL LDV     G +D  +         D +
Sbjct: 227 ECYVHNLLRI--SVYFPTLRHEILELIIEKLLKLDVNASRQGIEDAEETATQTCGGTDST 286

Query: 265 KGIFEMELEDDDDTTDDINEDSSELPRELSRRSLGGNVIAETLDSLIVLTFEHLES-CER 324
           +G+F M   D+D+ T+    ++   P  L +     + +AE LD L+ L   +++  C  
Sbjct: 287 EGLFNM---DEDEETE---HETKAGPERLDQMV---HPVAERLDILMSLVLSYMKDVCYV 346

Query: 325 DGRLN-----EVFDILLLSFQRTVLTAYKSKFAQFIVFYACSLDPEVCGARFAVSLADMF 384
           DG+++     +++  L+  F + +L  + S   QF +FY CS       A F   L    
Sbjct: 347 DGKVDNGKTKDLYRDLINIFDKLLLPTHASCHVQFFMFYLCSFKLGFAEA-FLEHLWKKL 406

Query: 385 VSCNDPPLIRMSAVSYLASFLSRGKFLTTSLVTTILKRLVDWCLEYGKTLNVDPNPKA-- 444
              ++P +IR +A +Y+ SFL+R KF+    V + L  LV+W   Y    N D   KA  
Sbjct: 407 QDPSNPAIIRQAAGNYIGSFLARAKFIPLITVKSCLDLLVNWLHIY--LNNQDSGTKAFC 466

Query: 445 ----HKVFYSGCQAIMYVLCFRMRSIL--EIPRLKSQLLLMPIGPLLTHRLSPLKVCLPS 504
               H  FYS CQA+ Y   FR + +L   +      L  +    ++  +L+PLK+CLPS
Sbjct: 467 DVALHGPFYSACQAVFYTFVFRHKQLLSGNLKEGLQYLQSLNFERIVMSQLNPLKICLPS 526

Query: 505 IVEEFLRQAKVANLFTPSETFIFNGLLESDYSRSFGG-------LERLDMFFPFDPCLLK 525
           +V  F        L         N        RS  G          LD FFPFDPC+LK
Sbjct: 527 VVNFFAAITNKYQLVFCYTIIERNNRQMLPVIRSTAGGDSVQICTNPLDTFFPFDPCVLK 569

[Close]

BLAST of Chy6G106970 vs. ExPASy Swiss-Prot
Match: Q10110 (RNA polymerase I-specific transcription initiation factor rrn3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=rrn3 PE=3 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 6.2e-25
Identity = 145/577 (25.13%), Postives = 254/577 (44.02%), Query Frame = 0


Query: 17  DINLTDAQLVDFIRGFLSSVSLGDIDGYNQLVGVIHHR-DRLSPDEVALLVTCLKALSGA 76
           D  L    L  F+   L   + G+  GY  L      + D         L   L AL+  
Sbjct: 46  DGRLMQQMLRAFVNKALDDKAEGNFAGYEDLRRQFAAKSDTKDAPSSLQLQNLLSALTCN 105

Query: 77  VSCIDIILHESLLAAIFKMSLWDYGPNVMDALIELIISLAVSNGKYVDSCLDMLVNNFMP 136
           VS +D   + SL+ ++          + +      + +L  +   Y+   + ML+ +   
Sbjct: 106 VSRLD-SSNSSLVMSVLDSVWVSRDESFVRCYTRFLGNLISAQSNYLPLVMTMLIQH--- 165

Query: 137 PNSYMDFLKKPHGLTIKEEVLSRVHTALKDISDLVPLAPLRLEQKVVHKMQRVFFNESLT 196
                  L +P  L I  E     H ALK + +LVP A   L   ++ +    + +ESL 
Sbjct: 166 ------MLYRPDSLAIHYE---HAHMALKYVLELVPRAHSFLYSSILEEFP--YKDESLL 225

Query: 197 T--IYVENMLRLEKGALSEFVGRKILTALVDKLLDLDVEIGWDDILKDDFSKGIFEMELE 256
               Y+ N+L + +   S  +   +L A++DK++ +DVEI  +  + DD  +   E E+ 
Sbjct: 226 AQMTYISNVLSICEYVPS--IKGPVLHAIIDKIIQIDVEIQVE--VDDDDEE---EDEVV 285

Query: 257 DDDDTTDDINED--------------SSELPRE--LSRRSL-GGNVIAETLDSLIVLTFE 316
            DDD T + + +              SSE+     L+  SL     + + LD L+   F 
Sbjct: 286 TDDDGTSNADSEVITASTLYERHTAISSEMTSSTILTPPSLTDTRQLMQQLDQLLYTLFS 345

Query: 317 HLE----SCERDGRLNEVFDILLLSFQRTVLTAYKSKFAQFIVFYACSLDPEVCGARFAV 376
           +L+    S  RD  L  V++ L+ SF  TVL  ++ ++ QF++F+A  LDPE       V
Sbjct: 346 YLDSNLKSTSRDRYL--VYNSLIKSFVNTVLKTFRCRYTQFLIFWASQLDPEFTDIFLGV 405

Query: 377 SLADMFVSCNDPPLIRMSAVSYLASFLSRGKFL---TTSLVTTILKRLVDWCLEYGKTLN 436
            L ++ +  + P  +R+S   Y+ S+++R K L   T  ++  ++ R V+  L+  +   
Sbjct: 406 -LTEVCLDPSQPYTLRLSGAMYIGSYVARAKALEKNTIQIIVNMMTRWVEAYLDQCENEL 465

Query: 437 VDPNPKAHKVFYSGCQAIMYVLCFRMRSILEIPRLKSQLL--------LMPIGPLLTHRL 496
            D     H VFY+  Q+I Y+ CFR R +      +S           L  +   +  RL
Sbjct: 466 SDDLLSKHSVFYAINQSIFYIFCFRWRELCVSDESESMEPRPNEWIPGLEILHRSVLSRL 525

Query: 497 SPLKVCLPSIVEEFLRQAKVANLFTPSETFIFNGLLESDYSRSFGGLERLDMFFPFDPCL 556
           +PL+ C P+IV +F   AKVAN    +  ++++ + ++       G + +D +FPFDP  
Sbjct: 526 NPLRYCSPNIVLQF---AKVANHL--NFMYVYSIIEQNRKGIFREGFDTMDAYFPFDPYR 585

Query: 557 LKKCDRIDENLMDDEAMARSYDDQDFDLDSGLNKMSI 559
           L K   I +   ++       DD + + D+     ++
Sbjct: 586 LTKSSIIVQPFYNEWQQIPGLDDDEEEEDTDYESSTV 592

[Close]

BLAST of Chy6G106970 vs. ExPASy TrEMBL
Match: A0A0A0L7G6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G122360 PE=3 SV=1)

HSP 1 Score: 1075.8 bits (2781), Expect = 0.0e+00
Identity = 559/607 (92.09%), Postives = 562/607 (92.59%), Query Frame = 0


Query: 1   MGAELENNQAQLHAMEDINLTDAQLVDFIRGFLSSVSLGDIDGYNQLVGVIHHRDRLSPD 60
           MGAELENNQAQLHAMED+NLTDAQLVDFIRGFLSSVSLGDIDGYNQLVGVIHHRDRLSPD
Sbjct: 1   MGAELENNQAQLHAMEDVNLTDAQLVDFIRGFLSSVSLGDIDGYNQLVGVIHHRDRLSPD 60

Query: 61  EVALLVTCLKALSGAVSCIDIILHESLLAAIFKMSLWDYGPNVMDALIELIISLAVSNGK 120
           EVALLVTCLKALSGAVSCIDIILHESLLAAIFKMSLWDYG NVMDALIELIISLAVSNGK
Sbjct: 61  EVALLVTCLKALSGAVSCIDIILHESLLAAIFKMSLWDYGSNVMDALIELIISLAVSNGK 120

Query: 121 YVDSCLDMLVNNFMPPNSYMDFLKKPHGLTIKEEVLSRVHTALKDISDLVPLAPLRLEQK 180
           YVDSCLDMLVNNFMPPNSYMD LKKPHGLT KEEVLSRVHTALKDISDLVPLAPLRLEQK
Sbjct: 121 YVDSCLDMLVNNFMPPNSYMDLLKKPHGLTRKEEVLSRVHTALKDISDLVPLAPLRLEQK 180

Query: 181 VVHKMQRVFFNESLTTIYVENMLRLEKGALSEFVGRKILTALVDKLLDLDVEIGWDDILK 240
           VVHKMQRVFFNESLTTIYVENMLRLEKGALSEFVGRKILTALVDKLLDLDVEIGWDDIL+
Sbjct: 181 VVHKMQRVFFNESLTTIYVENMLRLEKGALSEFVGRKILTALVDKLLDLDVEIGWDDILQ 240

Query: 241 DDFSKGIFEMELEDDDDTTDDINEDSSELPRELSRRSLGGNVIAETLDSLIVLTFEHLES 300
           DDFSKGIFEMELEDDDDTTDDINEDSSELPRELSRRSLGGNVIAETLDSLIVLTFEHLES
Sbjct: 241 DDFSKGIFEMELEDDDDTTDDINEDSSELPRELSRRSLGGNVIAETLDSLIVLTFEHLES 300

Query: 301 CERDGRLNEVFDILLLSFQRTVLTAYKSKFAQFIVFYACSLDPEVCGARFAVSLADMFVS 360
           CERDGRLNEVFDILLLSFQRTVLTAYKSKFAQFIVFYACSLDPEVCGARFA+SLADMFVS
Sbjct: 301 CERDGRLNEVFDILLLSFQRTVLTAYKSKFAQFIVFYACSLDPEVCGARFAISLADMFVS 360

Query: 361 CNDPPLIRMSAVSYLASFLSRGKFLTTSLVTTILKRLVDWCLEYGKTLNVDPNPKAHKVF 420
           CNDPPLIRMSAVSYLASFLSRGKFLTTSLVTTILKRLVDWCLEYGKTLNVDPNPKAHKVF
Sbjct: 361 CNDPPLIRMSAVSYLASFLSRGKFLTTSLVTTILKRLVDWCLEYGKTLNVDPNPKAHKVF 420

Query: 421 YSGCQAIMYVLCFRMRSILEIPRLKSQLLLMPIGPLLTHRLSPLKVCLPSIVEEFLRQAK 480
           YSGCQAIMYVLCFRMRSILEIPRLKSQLLLMPIGPLLTHRLSPLKVCLPSIVEEFLRQAK
Sbjct: 421 YSGCQAIMYVLCFRMRSILEIPRLKSQLLLMPIGPLLTHRLSPLKVCLPSIVEEFLRQAK 480

Query: 481 VANLFTPSETFIFNGLLESDYSRSFGGLERLDMFFPFDPCLLKKC--------------- 540
           VANLFTPSE FIFNGLLESDYSRSFGGLERLDMFFPFDPCLLKKC               
Sbjct: 481 VANLFTPSENFIFNGLLESDYSRSFGGLERLDMFFPFDPCLLKKCDRYLRPHFVYWSMVR 540

Query: 541 -------------------------DRIDENLMDDEAMARSYDDQDFDLDSGLNKMSITP 568
                                    DRIDENLMDDEAMA SYDDQDFDLDSGLNKMSITP
Sbjct: 541 PTYDEEEEEEEDDGGSSDEDAEIFPDRIDENLMDDEAMAISYDDQDFDLDSGLNKMSITP 600

[Close]

BLAST of Chy6G106970 vs. ExPASy TrEMBL
Match: A0A1S3AV30 (RNA polymerase I-specific transcription initiation factor RRN3 OS=Cucumis melo OX=3656 GN=LOC103483270 PE=3 SV=1)

HSP 1 Score: 1057.7 bits (2734), Expect = 2.6e-305
Identity = 547/606 (90.26%), Postives = 559/606 (92.24%), Query Frame = 0


Query: 1   MGAELENNQAQLHAMEDINLTDAQLVDFIRGFLSSVSLGDIDGYNQLVGVIHHRDRLSPD 60
           MGAELENNQAQLH MED+NLTDAQLVDFIRGFLSSVSLGD DGYNQLVGVIHHRDRLSPD
Sbjct: 1   MGAELENNQAQLHDMEDVNLTDAQLVDFIRGFLSSVSLGDTDGYNQLVGVIHHRDRLSPD 60

Query: 61  EVALLVTCLKALSGAVSCIDIILHESLLAAIFKMSLWDYGPNVMDALIELIISLAVSNGK 120
           EVALLVTCLKALSGAVSCIDII HESLLAAIFKMSLWDYGPNVMD+LIELIISLAVSNGK
Sbjct: 61  EVALLVTCLKALSGAVSCIDIIQHESLLAAIFKMSLWDYGPNVMDSLIELIISLAVSNGK 120

Query: 121 YVDSCLDMLVNNFMPPNSYMDFLKKPHGLTIKEEVLSRVHTALKDISDLVPLAPLRLEQK 180
           YV+SCLDMLVNNFMPPNSYMDFLKKPHGLT K+EVLSRVHTALKDISDLVPLAPLRLEQ 
Sbjct: 121 YVNSCLDMLVNNFMPPNSYMDFLKKPHGLTKKDEVLSRVHTALKDISDLVPLAPLRLEQI 180

Query: 181 VVHKMQRVFFNESLTTIYVENMLRLEKGALSEFVGRKILTALVDKLLDLDVEIGWDDILK 240
           VVHKMQRVFF ESLTTIYVENMLRLEKGALSEFVGRKILTALVDKLLDLDVEIGWDDIL+
Sbjct: 181 VVHKMQRVFFKESLTTIYVENMLRLEKGALSEFVGRKILTALVDKLLDLDVEIGWDDILQ 240

Query: 241 DDFSKGIFEMELEDDDDTTDDINEDSSELPRELSRRSLGGNVIAETLDSLIVLTFEHLES 300
           DDFSKGIFEMELEDDD+TTDDINEDSSELPRELSRRSLGGNVIAETLDSLIVLTFEHLES
Sbjct: 241 DDFSKGIFEMELEDDDETTDDINEDSSELPRELSRRSLGGNVIAETLDSLIVLTFEHLES 300

Query: 301 CERDGRLNEVFDILLLSFQRTVLTAYKSKFAQFIVFYACSLDPEVCGARFAVSLADMFVS 360
           CERDGRLNEVFDILLLSFQRTVLTAYKSKFAQF++FYACSLDPEVCGARFAVSLADMFVS
Sbjct: 301 CERDGRLNEVFDILLLSFQRTVLTAYKSKFAQFVIFYACSLDPEVCGARFAVSLADMFVS 360

Query: 361 CNDPPLIRMSAVSYLASFLSRGKFLTTSLVTTILKRLVDWCLEYGKTLNVDPNPKAHKVF 420
           CNDPPLIRMSAVSYLASFLSRGKFLTTSLVTTILKRLVDWCLEYG+TLNVDPNPKAHKVF
Sbjct: 361 CNDPPLIRMSAVSYLASFLSRGKFLTTSLVTTILKRLVDWCLEYGETLNVDPNPKAHKVF 420

Query: 421 YSGCQAIMYVLCFRMRSILEIPRLKSQLLLMPIGPLLTHRLSPLKVCLPSIVEEFLRQAK 480
           YSGCQAIMYVLCFRMRSILEIPRLKSQLLLMPIGPLLTHRLSPLKVCLPSIVEEFL+QAK
Sbjct: 421 YSGCQAIMYVLCFRMRSILEIPRLKSQLLLMPIGPLLTHRLSPLKVCLPSIVEEFLQQAK 480

Query: 481 VANLFTPSETFIFNGLLESDYSRSFGGLERLDMFFPFDPCLLKKCDR------------- 540
           VANLFTPSETFIFNGLLES+YSRSFGGLERLDMFFPFDPCLLKKCDR             
Sbjct: 481 VANLFTPSETFIFNGLLESEYSRSFGGLERLDMFFPFDPCLLKKCDRYLRPHFVYWSMVR 540

Query: 541 --------------------------IDENLMDDEAMARSYDDQDFDLDSGLNKMSITPR 568
                                     I+ENLMDD AMARSYDDQDFDLDSGLN MSITPR
Sbjct: 541 PTYAEEEEQEEDGGSSDEDAEVFPDIIEENLMDDVAMARSYDDQDFDLDSGLNNMSITPR 600

[Close]

BLAST of Chy6G106970 vs. ExPASy TrEMBL
Match: A0A5D3D051 (RNA polymerase I-specific transcription initiation factor RRN3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G004710 PE=3 SV=1)

HSP 1 Score: 1057.7 bits (2734), Expect = 2.6e-305
Identity = 547/606 (90.26%), Postives = 559/606 (92.24%), Query Frame = 0


Query: 1   MGAELENNQAQLHAMEDINLTDAQLVDFIRGFLSSVSLGDIDGYNQLVGVIHHRDRLSPD 60
           MGAELENNQAQLH MED+NLTDAQLVDFIRGFLSSVSLGD DGYNQLVGVIHHRDRLSPD
Sbjct: 1   MGAELENNQAQLHDMEDVNLTDAQLVDFIRGFLSSVSLGDTDGYNQLVGVIHHRDRLSPD 60

Query: 61  EVALLVTCLKALSGAVSCIDIILHESLLAAIFKMSLWDYGPNVMDALIELIISLAVSNGK 120
           EVALLVTCLKALSGAVSCIDII HESLLAAIFKMSLWDYGPNVMD+LIELIISLAVSNGK
Sbjct: 61  EVALLVTCLKALSGAVSCIDIIQHESLLAAIFKMSLWDYGPNVMDSLIELIISLAVSNGK 120

Query: 121 YVDSCLDMLVNNFMPPNSYMDFLKKPHGLTIKEEVLSRVHTALKDISDLVPLAPLRLEQK 180
           YV+SCLDMLVNNFMPPNSYMDFLKKPHGLT K+EVLSRVHTALKDISDLVPLAPLRLEQ 
Sbjct: 121 YVNSCLDMLVNNFMPPNSYMDFLKKPHGLTKKDEVLSRVHTALKDISDLVPLAPLRLEQI 180

Query: 181 VVHKMQRVFFNESLTTIYVENMLRLEKGALSEFVGRKILTALVDKLLDLDVEIGWDDILK 240
           VVHKMQRVFF ESLTTIYVENMLRLEKGALSEFVGRKILTALVDKLLDLDVEIGWDDIL+
Sbjct: 181 VVHKMQRVFFKESLTTIYVENMLRLEKGALSEFVGRKILTALVDKLLDLDVEIGWDDILQ 240

Query: 241 DDFSKGIFEMELEDDDDTTDDINEDSSELPRELSRRSLGGNVIAETLDSLIVLTFEHLES 300
           DDFSKGIFEMELEDDD+TTDDINEDSSELPRELSRRSLGGNVIAETLDSLIVLTFEHLES
Sbjct: 241 DDFSKGIFEMELEDDDETTDDINEDSSELPRELSRRSLGGNVIAETLDSLIVLTFEHLES 300

Query: 301 CERDGRLNEVFDILLLSFQRTVLTAYKSKFAQFIVFYACSLDPEVCGARFAVSLADMFVS 360
           CERDGRLNEVFDILLLSFQRTVLTAYKSKFAQF++FYACSLDPEVCGARFAVSLADMFVS
Sbjct: 301 CERDGRLNEVFDILLLSFQRTVLTAYKSKFAQFVIFYACSLDPEVCGARFAVSLADMFVS 360

Query: 361 CNDPPLIRMSAVSYLASFLSRGKFLTTSLVTTILKRLVDWCLEYGKTLNVDPNPKAHKVF 420
           CNDPPLIRMSAVSYLASFLSRGKFLTTSLVTTILKRLVDWCLEYG+TLNVDPNPKAHKVF
Sbjct: 361 CNDPPLIRMSAVSYLASFLSRGKFLTTSLVTTILKRLVDWCLEYGETLNVDPNPKAHKVF 420

Query: 421 YSGCQAIMYVLCFRMRSILEIPRLKSQLLLMPIGPLLTHRLSPLKVCLPSIVEEFLRQAK 480
           YSGCQAIMYVLCFRMRSILEIPRLKSQLLLMPIGPLLTHRLSPLKVCLPSIVEEFL+QAK
Sbjct: 421 YSGCQAIMYVLCFRMRSILEIPRLKSQLLLMPIGPLLTHRLSPLKVCLPSIVEEFLQQAK 480

Query: 481 VANLFTPSETFIFNGLLESDYSRSFGGLERLDMFFPFDPCLLKKCDR------------- 540
           VANLFTPSETFIFNGLLES+YSRSFGGLERLDMFFPFDPCLLKKCDR             
Sbjct: 481 VANLFTPSETFIFNGLLESEYSRSFGGLERLDMFFPFDPCLLKKCDRYLRPHFVYWSMVR 540

Query: 541 --------------------------IDENLMDDEAMARSYDDQDFDLDSGLNKMSITPR 568
                                     I+ENLMDD AMARSYDDQDFDLDSGLN MSITPR
Sbjct: 541 PTYAEEEEQEEDGGSSDEDAEVFPDIIEENLMDDVAMARSYDDQDFDLDSGLNNMSITPR 600

[Close]

BLAST of Chy6G106970 vs. ExPASy TrEMBL
Match: A0A5A7U3Y2 (RNA polymerase I-specific transcription initiation factor RRN3 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold171G001870 PE=3 SV=1)

HSP 1 Score: 1044.6 bits (2700), Expect = 2.3e-301
Identity = 547/629 (86.96%), Postives = 559/629 (88.87%), Query Frame = 0


Query: 1   MGAELENNQAQLHAMEDINLTDAQLVDFIRGFLSSVSLGDIDGYNQLVGVIHHRDRLSPD 60
           MGAELENNQAQLH MED+NLTDAQLVDFIRGFLSSVSLGD DGYNQLVGVIHHRDRLSPD
Sbjct: 1   MGAELENNQAQLHDMEDVNLTDAQLVDFIRGFLSSVSLGDTDGYNQLVGVIHHRDRLSPD 60

Query: 61  EVALLVTCLKALSGAVSCIDIILHESLLAA-----------------------IFKMSLW 120
           EVALLVTCLKALSGAVSCIDII HESLLAA                       IFKMSLW
Sbjct: 61  EVALLVTCLKALSGAVSCIDIIQHESLLAAVSLCLNSESLSCNFVVVMEVLSQIFKMSLW 120

Query: 121 DYGPNVMDALIELIISLAVSNGKYVDSCLDMLVNNFMPPNSYMDFLKKPHGLTIKEEVLS 180
           DYGPNVMD+LIELIISLAVSNGKYV+SCLDMLVNNFMPPNSYMDFLKKPHGLT K+EVLS
Sbjct: 121 DYGPNVMDSLIELIISLAVSNGKYVNSCLDMLVNNFMPPNSYMDFLKKPHGLTKKDEVLS 180

Query: 181 RVHTALKDISDLVPLAPLRLEQKVVHKMQRVFFNESLTTIYVENMLRLEKGALSEFVGRK 240
           RVHTALKDISDLVPLAPLRLEQ VVHKMQRVFF ESLTTIYVENMLRLEKGALSEFVGRK
Sbjct: 181 RVHTALKDISDLVPLAPLRLEQIVVHKMQRVFFKESLTTIYVENMLRLEKGALSEFVGRK 240

Query: 241 ILTALVDKLLDLDVEIGWDDILKDDFSKGIFEMELEDDDDTTDDINEDSSELPRELSRRS 300
           ILTALVDKLLDLDVEIGWDDIL+DDFSKGIFEMELEDDD+TTDDINEDSSELPRELSRRS
Sbjct: 241 ILTALVDKLLDLDVEIGWDDILQDDFSKGIFEMELEDDDETTDDINEDSSELPRELSRRS 300

Query: 301 LGGNVIAETLDSLIVLTFEHLESCERDGRLNEVFDILLLSFQRTVLTAYKSKFAQFIVFY 360
           LGGNVIAETLDSLIVLTFEHLESCERDGRLNEVFDILLLSFQRTVLTAYKSKFAQF++FY
Sbjct: 301 LGGNVIAETLDSLIVLTFEHLESCERDGRLNEVFDILLLSFQRTVLTAYKSKFAQFVIFY 360

Query: 361 ACSLDPEVCGARFAVSLADMFVSCNDPPLIRMSAVSYLASFLSRGKFLTTSLVTTILKRL 420
           ACSLDPEVCGARFAVSLADMFVSCNDPPLIRMSAVSYLASFLSRGKFLTTSLVTTILKRL
Sbjct: 361 ACSLDPEVCGARFAVSLADMFVSCNDPPLIRMSAVSYLASFLSRGKFLTTSLVTTILKRL 420

Query: 421 VDWCLEYGKTLNVDPNPKAHKVFYSGCQAIMYVLCFRMRSILEIPRLKSQLLLMPIGPLL 480
           VDWCLEYG+TLNVDPNPKAHKVFYSGCQAIMYVLCFRMRSILEIPRLKSQLLLMPIGPLL
Sbjct: 421 VDWCLEYGETLNVDPNPKAHKVFYSGCQAIMYVLCFRMRSILEIPRLKSQLLLMPIGPLL 480

Query: 481 THRLSPLKVCLPSIVEEFLRQAKVANLFTPSETFIFNGLLESDYSRSFGGLERLDMFFPF 540
           THRLSPLKVCLPSIVEEFL+QAKVANLFTPSETFIFNGLLES+YSRSFGGLERLDMFFPF
Sbjct: 481 THRLSPLKVCLPSIVEEFLQQAKVANLFTPSETFIFNGLLESEYSRSFGGLERLDMFFPF 540

Query: 541 DPCLLKKCDR---------------------------------------IDENLMDDEAM 568
           DPCLLKKCDR                                       I+ENLMDD AM
Sbjct: 541 DPCLLKKCDRYLRPHFVYWSMVRPTYAEEEEQEEDGGSSDEDAEVFPDIIEENLMDDVAM 600

[Close]

BLAST of Chy6G106970 vs. ExPASy TrEMBL
Match: A0A6J1F0A3 (RNA polymerase I-specific transcription initiation factor RRN3-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111438313 PE=3 SV=1)

HSP 1 Score: 966.8 bits (2498), Expect = 6.1e-278
Identity = 499/608 (82.07%), Postives = 541/608 (88.98%), Query Frame = 0


Query: 1   MGAELENNQAQLHAMEDINLTDAQLVDFIRGFLSSVSLGDIDGYNQLVGVIHHRDRLSPD 60
           MG ELEN QAQ   ME +N TD QLVDFIRGFL+SVSLG+ DGY+QLVGVIHHR RLS D
Sbjct: 1   MGVELENGQAQFQDMEGVNFTDDQLVDFIRGFLTSVSLGNTDGYHQLVGVIHHRGRLSAD 60

Query: 61  EVALLVTCLKALSGAVSCIDIILHESLLAAIFKMSLWDYGPNVMDALIELIISLAVSNGK 120
           EVALLVTCLKALSGAVSCID++LHESLLAAIFKMSLWDYGPNVMDALIELI SLAVS+GK
Sbjct: 61  EVALLVTCLKALSGAVSCIDVVLHESLLAAIFKMSLWDYGPNVMDALIELITSLAVSSGK 120

Query: 121 YVDSCLDMLVNNFMPPNSYMDFLKKPHGLTIKEEVLSRVHTALKDISDLVPLAPLRLEQK 180
           YVDSCLDMLV NFMPP+SY DFLKKPHGLT K+EVLSRVHTALKDISDLVPLAPLRLE  
Sbjct: 121 YVDSCLDMLVTNFMPPHSYKDFLKKPHGLTRKDEVLSRVHTALKDISDLVPLAPLRLELI 180

Query: 181 VVHKMQRVFFNESLTTIYVENMLRLEKGALSEFVGRKILTALVDKLLDLDVEIGWDDILK 240
           VVHKMQRVFF ESLTTIYVENMLRLEKGA+SEFVGRKILTALVDKLLDLDVEIGWDDIL+
Sbjct: 181 VVHKMQRVFFKESLTTIYVENMLRLEKGAMSEFVGRKILTALVDKLLDLDVEIGWDDILQ 240

Query: 241 DDFSKGIFEMELEDDDDTTDDINEDSSELPRELSRRSLGGNVIAETLDSLIVLTFEHLES 300
           DDFSKGIFE+ELEDD+++TDDI+EDSSELPRELSR+SLGGNVIAETLDSLIVLTFEHLES
Sbjct: 241 DDFSKGIFEIELEDDNESTDDIDEDSSELPRELSRKSLGGNVIAETLDSLIVLTFEHLES 300

Query: 301 CERDGRLNEVFDILLLSFQRTVLTAYKSKFAQFIVFYACSLDPEVCGARFAVSLADMFVS 360
           CERDGRL+EVFDILLLSFQRTVLTAYKSKFAQF++FYAC+LDPEVCGARFAV+LADMFVS
Sbjct: 301 CERDGRLSEVFDILLLSFQRTVLTAYKSKFAQFVIFYACALDPEVCGARFAVTLADMFVS 360

Query: 361 CNDPPLIRMSAVSYLASFLSRGKFLTTSLVTTILKRLVDWCLEYGKTLNVDPNPKAHKVF 420
           CN  PL RMSA+SYLAS+LSRGKFL+TSLVTTILKRLVDWCLEYGKT +VD NPKAHK+F
Sbjct: 361 CNGLPLTRMSAISYLASYLSRGKFLSTSLVTTILKRLVDWCLEYGKTHDVDLNPKAHKIF 420

Query: 421 YSGCQAIMYVLCFRMRSILEIPRLKSQLLLMPIGPLLTHRLSPLKVCLPSIVEEFLRQAK 480
           YSGCQAIMYVLCFRMRSILEIPRLKSQLLLMPIG +LTHRLSPLKVCLPSIVEEFLRQAK
Sbjct: 421 YSGCQAIMYVLCFRMRSILEIPRLKSQLLLMPIGRILTHRLSPLKVCLPSIVEEFLRQAK 480

Query: 481 VANLFTPSETFIFNGLLESDYSRSFGGLERLDMFFPFDPCLLKKCDR------------- 540
           VANLFTPSETFIFNGLLES+YS++FGG+ERLDMFFP+DPCLLK+CDR             
Sbjct: 481 VANLFTPSETFIFNGLLESEYSKTFGGIERLDMFFPYDPCLLKRCDRYLRPYFVYWSMVR 540

Query: 541 ------------------------IDENLMDDEAMARSYDDQDFDL---DSGLNKMSITP 569
                                   I+ENLMDDEAMA SYD+++FDL   D+ L+KMSITP
Sbjct: 541 PTYDEEEEDEGSSDEDVAEVFPDKIEENLMDDEAMATSYDNREFDLDEFDNALDKMSITP 600

[Close]

BLAST of Chy6G106970 vs. NCBI nr
Match: KAE8650250.1 (hypothetical protein Csa_010750 [Cucumis sativus])

HSP 1 Score: 1660 bits (4299), Expect = 0.0
Identity = 860/891 (96.52%), Postives = 870/891 (97.64%), Query Frame = 0


Query: 1   MGAELENNQAQLHAMEDINLTDAQLVDFIRGFLSSVSLGDIDGYNQLVGVIHHRDRLSPD 60
           MGAELENNQAQLHAMED+NLTDAQLVDFIRGFLSSVSLGDIDGYNQLVGVIHHRDRLSPD
Sbjct: 1   MGAELENNQAQLHAMEDVNLTDAQLVDFIRGFLSSVSLGDIDGYNQLVGVIHHRDRLSPD 60

Query: 61  EVALLVTCLKALSGAVSCIDIILHESLLAAIFKMSLWDYGPNVMDALIELIISLAVSNGK 120
           EVALLVTCLKALSGAVSCIDIILHESLLAAIFKMSLWDYG NVMDALIELIISLAVSNGK
Sbjct: 61  EVALLVTCLKALSGAVSCIDIILHESLLAAIFKMSLWDYGSNVMDALIELIISLAVSNGK 120

Query: 121 YVDSCLDMLVNNFMPPNSYMDFLKKPHGLTIKEEVLSRVHTALKDISDLVPLAPLRLEQK 180
           YVDSCLDMLVNNFMPPNSYMD LKKPHGLT KEEVLSRVHTALKDISDLVPLAPLRLEQK
Sbjct: 121 YVDSCLDMLVNNFMPPNSYMDLLKKPHGLTRKEEVLSRVHTALKDISDLVPLAPLRLEQK 180

Query: 181 VVHKMQRVFFNESLTTIYVENMLRLEKGALSEFVGRKILTALVDKLLDLDVEIGWDDILK 240
           VVHKMQRVFFNESLTTIYVENMLRLEKGALSEFVGRKILTALVDKLLDLDVEIGWDDIL+
Sbjct: 181 VVHKMQRVFFNESLTTIYVENMLRLEKGALSEFVGRKILTALVDKLLDLDVEIGWDDILQ 240

Query: 241 DDFSKGIFEMELEDDDDTTDDINEDSSELPRELSRRSLGGNVIAETLDSLIVLTFEHLES 300
           DDFSKGIFEMELEDDDDTTDDINEDSSELPRELSRRSLGGNVIAETLDSLIVLTFEHLES
Sbjct: 241 DDFSKGIFEMELEDDDDTTDDINEDSSELPRELSRRSLGGNVIAETLDSLIVLTFEHLES 300

Query: 301 CERDGRLNEVFDILLLSFQRTVLTAYKSKFAQFIVFYACSLDPEVCGARFAVSLADMFVS 360
           CERDGRLNEVFDILLLSFQRTVLTAYKSKFAQFIVFYACSLDPEVCGARFA+SLADMFVS
Sbjct: 301 CERDGRLNEVFDILLLSFQRTVLTAYKSKFAQFIVFYACSLDPEVCGARFAISLADMFVS 360

Query: 361 CNDPPLIRMSAVSYLASFLSRGKFLTTSLVTTILKRLVDWCLEYGKTLNVDPNPKAHKVF 420
           CNDPPLIRMSAVSYLASFLSRGKFLTTSLVTTILKRLVDWCLEYGKTLNVDPNPKAHKVF
Sbjct: 361 CNDPPLIRMSAVSYLASFLSRGKFLTTSLVTTILKRLVDWCLEYGKTLNVDPNPKAHKVF 420

Query: 421 YSGCQAIMYVLCFRMRSILEIPRLKSQLLLMPIGPLLTHRLSPLKVCLPSIVEEFLRQAK 480
           YSGCQAIMYVLCFRMRSILEIPRLKSQLLLMPIGPLLTHRLSPLKVCLPSIVEEFLRQAK
Sbjct: 421 YSGCQAIMYVLCFRMRSILEIPRLKSQLLLMPIGPLLTHRLSPLKVCLPSIVEEFLRQAK 480

Query: 481 VANLFTPSETFIFNGLLESDYSRSFGGLERLDMFFPFDPCLLKKCDRIDENLMDDEAMAR 540
           VANLFTPSE FIFNGLLESDYSRSFGGLERLDMFFPFDPCLLKKCDRIDENLMDDEAMA 
Sbjct: 481 VANLFTPSENFIFNGLLESDYSRSFGGLERLDMFFPFDPCLLKKCDRIDENLMDDEAMAI 540

Query: 541 SYDDQDFDLDSGLNKMSITPRNSLQYR---RLNALTTGQQASQLRSQPSQQSFSQGLSSQ 600
           SYDDQDFDLDSGLNK+++     + Y    RLNALTTGQQASQLRSQPSQQSFSQGLSSQ
Sbjct: 541 SYDDQDFDLDSGLNKIALIIALVILYTPGLRLNALTTGQQASQLRSQPSQQSFSQGLSSQ 600

Query: 601 HGMYSQLSQNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSKEDCQLGISKSSNSLTQ 660
           HGMYSQLSQNSFDEVVTNEQRFSSQDRENSIKKNSFFPP+SYSKED QLGISKSS SLTQ
Sbjct: 601 HGMYSQLSQNSFDEVVTNEQRFSSQDRENSIKKNSFFPPVSYSKEDSQLGISKSSTSLTQ 660

Query: 661 KWRPSPLPDSKCQVGEELDRRLGTIENSLNKFGKILDSLLSDILQLNKGMKQVSLDVESI 720
           KWRPSPLPDSKCQVGEELDRRLGTIENS+NKFGKILDSLLSDILQLNKGMKQVSLDVESI
Sbjct: 661 KWRPSPLPDSKCQVGEELDRRLGTIENSVNKFGKILDSLLSDILQLNKGMKQVSLDVESI 720

Query: 721 WQKMLVNSSSLQSMNKDHDDMKAIIDGGFKLISDQLKKDAYQERLHEISDFLSSLEKQVQ 780
           WQKML+NSSSLQSMNKDHDDMKAIIDGGFKLISDQLKKDAYQERLHEISDFLSSLEKQVQ
Sbjct: 721 WQKMLINSSSLQSMNKDHDDMKAIIDGGFKLISDQLKKDAYQERLHEISDFLSSLEKQVQ 780

Query: 781 ASQLKLKNDFISTFTKEMKAMISTLKNPLQKFPPHSIQSPESNACLDAPKQKQRRCKIQS 840
           ASQLKLKNDFISTFTKEMKAMI TLKNPLQKFPPHSIQSPESNACLD PKQKQRRCKIQS
Sbjct: 781 ASQLKLKNDFISTFTKEMKAMICTLKNPLQKFPPHSIQSPESNACLDVPKQKQRRCKIQS 840

Query: 841 AAPNVCTQATAVQKEEVGMWKSVKVGKAFCTSSVVKRDDPNKVIPFSEQIC 888
           AAPNVCTQAT VQKEEVGMWKSVKVGKAFCTSSVVKRDDPNKVIPFSEQ C
Sbjct: 841 AAPNVCTQATGVQKEEVGMWKSVKVGKAFCTSSVVKRDDPNKVIPFSEQQC 891

[Close]

BLAST of Chy6G106970 vs. NCBI nr
Match: XP_004133864.1 (RNA polymerase I-specific transcription initiation factor RRN3 [Cucumis sativus] >XP_011650750.1 RNA polymerase I-specific transcription initiation factor RRN3 [Cucumis sativus])

HSP 1 Score: 1071 bits (2770), Expect = 0.0
Identity = 559/607 (92.09%), Postives = 562/607 (92.59%), Query Frame = 0


Query: 1   MGAELENNQAQLHAMEDINLTDAQLVDFIRGFLSSVSLGDIDGYNQLVGVIHHRDRLSPD 60
           MGAELENNQAQLHAMED+NLTDAQLVDFIRGFLSSVSLGDIDGYNQLVGVIHHRDRLSPD
Sbjct: 1   MGAELENNQAQLHAMEDVNLTDAQLVDFIRGFLSSVSLGDIDGYNQLVGVIHHRDRLSPD 60

Query: 61  EVALLVTCLKALSGAVSCIDIILHESLLAAIFKMSLWDYGPNVMDALIELIISLAVSNGK 120
           EVALLVTCLKALSGAVSCIDIILHESLLAAIFKMSLWDYG NVMDALIELIISLAVSNGK
Sbjct: 61  EVALLVTCLKALSGAVSCIDIILHESLLAAIFKMSLWDYGSNVMDALIELIISLAVSNGK 120

Query: 121 YVDSCLDMLVNNFMPPNSYMDFLKKPHGLTIKEEVLSRVHTALKDISDLVPLAPLRLEQK 180
           YVDSCLDMLVNNFMPPNSYMD LKKPHGLT KEEVLSRVHTALKDISDLVPLAPLRLEQK
Sbjct: 121 YVDSCLDMLVNNFMPPNSYMDLLKKPHGLTRKEEVLSRVHTALKDISDLVPLAPLRLEQK 180

Query: 181 VVHKMQRVFFNESLTTIYVENMLRLEKGALSEFVGRKILTALVDKLLDLDVEIGWDDILK 240
           VVHKMQRVFFNESLTTIYVENMLRLEKGALSEFVGRKILTALVDKLLDLDVEIGWDDIL+
Sbjct: 181 VVHKMQRVFFNESLTTIYVENMLRLEKGALSEFVGRKILTALVDKLLDLDVEIGWDDILQ 240

Query: 241 DDFSKGIFEMELEDDDDTTDDINEDSSELPRELSRRSLGGNVIAETLDSLIVLTFEHLES 300
           DDFSKGIFEMELEDDDDTTDDINEDSSELPRELSRRSLGGNVIAETLDSLIVLTFEHLES
Sbjct: 241 DDFSKGIFEMELEDDDDTTDDINEDSSELPRELSRRSLGGNVIAETLDSLIVLTFEHLES 300

Query: 301 CERDGRLNEVFDILLLSFQRTVLTAYKSKFAQFIVFYACSLDPEVCGARFAVSLADMFVS 360
           CERDGRLNEVFDILLLSFQRTVLTAYKSKFAQFIVFYACSLDPEVCGARFA+SLADMFVS
Sbjct: 301 CERDGRLNEVFDILLLSFQRTVLTAYKSKFAQFIVFYACSLDPEVCGARFAISLADMFVS 360

Query: 361 CNDPPLIRMSAVSYLASFLSRGKFLTTSLVTTILKRLVDWCLEYGKTLNVDPNPKAHKVF 420
           CNDPPLIRMSAVSYLASFLSRGKFLTTSLVTTILKRLVDWCLEYGKTLNVDPNPKAHKVF
Sbjct: 361 CNDPPLIRMSAVSYLASFLSRGKFLTTSLVTTILKRLVDWCLEYGKTLNVDPNPKAHKVF 420

Query: 421 YSGCQAIMYVLCFRMRSILEIPRLKSQLLLMPIGPLLTHRLSPLKVCLPSIVEEFLRQAK 480
           YSGCQAIMYVLCFRMRSILEIPRLKSQLLLMPIGPLLTHRLSPLKVCLPSIVEEFLRQAK
Sbjct: 421 YSGCQAIMYVLCFRMRSILEIPRLKSQLLLMPIGPLLTHRLSPLKVCLPSIVEEFLRQAK 480

Query: 481 VANLFTPSETFIFNGLLESDYSRSFGGLERLDMFFPFDPCLLKKCDR------------- 540
           VANLFTPSE FIFNGLLESDYSRSFGGLERLDMFFPFDPCLLKKCDR             
Sbjct: 481 VANLFTPSENFIFNGLLESDYSRSFGGLERLDMFFPFDPCLLKKCDRYLRPHFVYWSMVR 540

Query: 541 ---------------------------IDENLMDDEAMARSYDDQDFDLDSGLNKMSITP 567
                                      IDENLMDDEAMA SYDDQDFDLDSGLNKMSITP
Sbjct: 541 PTYDEEEEEEEDDGGSSDEDAEIFPDRIDENLMDDEAMAISYDDQDFDLDSGLNKMSITP 600

[Close]

BLAST of Chy6G106970 vs. NCBI nr
Match: XP_008438040.1 (PREDICTED: RNA polymerase I-specific transcription initiation factor RRN3 [Cucumis melo] >XP_008438041.1 PREDICTED: RNA polymerase I-specific transcription initiation factor RRN3 [Cucumis melo] >XP_008438044.1 PREDICTED: RNA polymerase I-specific transcription initiation factor RRN3 [Cucumis melo] >TYK17601.1 RNA polymerase I-specific transcription initiation factor RRN3 [Cucumis melo var. makuwa])

HSP 1 Score: 1053 bits (2723), Expect = 0.0
Identity = 547/606 (90.26%), Postives = 559/606 (92.24%), Query Frame = 0


Query: 1   MGAELENNQAQLHAMEDINLTDAQLVDFIRGFLSSVSLGDIDGYNQLVGVIHHRDRLSPD 60
           MGAELENNQAQLH MED+NLTDAQLVDFIRGFLSSVSLGD DGYNQLVGVIHHRDRLSPD
Sbjct: 1   MGAELENNQAQLHDMEDVNLTDAQLVDFIRGFLSSVSLGDTDGYNQLVGVIHHRDRLSPD 60

Query: 61  EVALLVTCLKALSGAVSCIDIILHESLLAAIFKMSLWDYGPNVMDALIELIISLAVSNGK 120
           EVALLVTCLKALSGAVSCIDII HESLLAAIFKMSLWDYGPNVMD+LIELIISLAVSNGK
Sbjct: 61  EVALLVTCLKALSGAVSCIDIIQHESLLAAIFKMSLWDYGPNVMDSLIELIISLAVSNGK 120

Query: 121 YVDSCLDMLVNNFMPPNSYMDFLKKPHGLTIKEEVLSRVHTALKDISDLVPLAPLRLEQK 180
           YV+SCLDMLVNNFMPPNSYMDFLKKPHGLT K+EVLSRVHTALKDISDLVPLAPLRLEQ 
Sbjct: 121 YVNSCLDMLVNNFMPPNSYMDFLKKPHGLTKKDEVLSRVHTALKDISDLVPLAPLRLEQI 180

Query: 181 VVHKMQRVFFNESLTTIYVENMLRLEKGALSEFVGRKILTALVDKLLDLDVEIGWDDILK 240
           VVHKMQRVFF ESLTTIYVENMLRLEKGALSEFVGRKILTALVDKLLDLDVEIGWDDIL+
Sbjct: 181 VVHKMQRVFFKESLTTIYVENMLRLEKGALSEFVGRKILTALVDKLLDLDVEIGWDDILQ 240

Query: 241 DDFSKGIFEMELEDDDDTTDDINEDSSELPRELSRRSLGGNVIAETLDSLIVLTFEHLES 300
           DDFSKGIFEMELEDDD+TTDDINEDSSELPRELSRRSLGGNVIAETLDSLIVLTFEHLES
Sbjct: 241 DDFSKGIFEMELEDDDETTDDINEDSSELPRELSRRSLGGNVIAETLDSLIVLTFEHLES 300

Query: 301 CERDGRLNEVFDILLLSFQRTVLTAYKSKFAQFIVFYACSLDPEVCGARFAVSLADMFVS 360
           CERDGRLNEVFDILLLSFQRTVLTAYKSKFAQF++FYACSLDPEVCGARFAVSLADMFVS
Sbjct: 301 CERDGRLNEVFDILLLSFQRTVLTAYKSKFAQFVIFYACSLDPEVCGARFAVSLADMFVS 360

Query: 361 CNDPPLIRMSAVSYLASFLSRGKFLTTSLVTTILKRLVDWCLEYGKTLNVDPNPKAHKVF 420
           CNDPPLIRMSAVSYLASFLSRGKFLTTSLVTTILKRLVDWCLEYG+TLNVDPNPKAHKVF
Sbjct: 361 CNDPPLIRMSAVSYLASFLSRGKFLTTSLVTTILKRLVDWCLEYGETLNVDPNPKAHKVF 420

Query: 421 YSGCQAIMYVLCFRMRSILEIPRLKSQLLLMPIGPLLTHRLSPLKVCLPSIVEEFLRQAK 480
           YSGCQAIMYVLCFRMRSILEIPRLKSQLLLMPIGPLLTHRLSPLKVCLPSIVEEFL+QAK
Sbjct: 421 YSGCQAIMYVLCFRMRSILEIPRLKSQLLLMPIGPLLTHRLSPLKVCLPSIVEEFLQQAK 480

Query: 481 VANLFTPSETFIFNGLLESDYSRSFGGLERLDMFFPFDPCLLKKCDR------------- 540
           VANLFTPSETFIFNGLLES+YSRSFGGLERLDMFFPFDPCLLKKCDR             
Sbjct: 481 VANLFTPSETFIFNGLLESEYSRSFGGLERLDMFFPFDPCLLKKCDRYLRPHFVYWSMVR 540

Query: 541 --------------------------IDENLMDDEAMARSYDDQDFDLDSGLNKMSITPR 567
                                     I+ENLMDD AMARSYDDQDFDLDSGLN MSITPR
Sbjct: 541 PTYAEEEEQEEDGGSSDEDAEVFPDIIEENLMDDVAMARSYDDQDFDLDSGLNNMSITPR 600

[Close]

BLAST of Chy6G106970 vs. NCBI nr
Match: KAA0048966.1 (RNA polymerase I-specific transcription initiation factor RRN3 [Cucumis melo var. makuwa])

HSP 1 Score: 1040 bits (2689), Expect = 0.0
Identity = 547/629 (86.96%), Postives = 559/629 (88.87%), Query Frame = 0


Query: 1   MGAELENNQAQLHAMEDINLTDAQLVDFIRGFLSSVSLGDIDGYNQLVGVIHHRDRLSPD 60
           MGAELENNQAQLH MED+NLTDAQLVDFIRGFLSSVSLGD DGYNQLVGVIHHRDRLSPD
Sbjct: 1   MGAELENNQAQLHDMEDVNLTDAQLVDFIRGFLSSVSLGDTDGYNQLVGVIHHRDRLSPD 60

Query: 61  EVALLVTCLKALSGAVSCIDIILHESLLAA-----------------------IFKMSLW 120
           EVALLVTCLKALSGAVSCIDII HESLLAA                       IFKMSLW
Sbjct: 61  EVALLVTCLKALSGAVSCIDIIQHESLLAAVSLCLNSESLSCNFVVVMEVLSQIFKMSLW 120

Query: 121 DYGPNVMDALIELIISLAVSNGKYVDSCLDMLVNNFMPPNSYMDFLKKPHGLTIKEEVLS 180
           DYGPNVMD+LIELIISLAVSNGKYV+SCLDMLVNNFMPPNSYMDFLKKPHGLT K+EVLS
Sbjct: 121 DYGPNVMDSLIELIISLAVSNGKYVNSCLDMLVNNFMPPNSYMDFLKKPHGLTKKDEVLS 180

Query: 181 RVHTALKDISDLVPLAPLRLEQKVVHKMQRVFFNESLTTIYVENMLRLEKGALSEFVGRK 240
           RVHTALKDISDLVPLAPLRLEQ VVHKMQRVFF ESLTTIYVENMLRLEKGALSEFVGRK
Sbjct: 181 RVHTALKDISDLVPLAPLRLEQIVVHKMQRVFFKESLTTIYVENMLRLEKGALSEFVGRK 240

Query: 241 ILTALVDKLLDLDVEIGWDDILKDDFSKGIFEMELEDDDDTTDDINEDSSELPRELSRRS 300
           ILTALVDKLLDLDVEIGWDDIL+DDFSKGIFEMELEDDD+TTDDINEDSSELPRELSRRS
Sbjct: 241 ILTALVDKLLDLDVEIGWDDILQDDFSKGIFEMELEDDDETTDDINEDSSELPRELSRRS 300

Query: 301 LGGNVIAETLDSLIVLTFEHLESCERDGRLNEVFDILLLSFQRTVLTAYKSKFAQFIVFY 360
           LGGNVIAETLDSLIVLTFEHLESCERDGRLNEVFDILLLSFQRTVLTAYKSKFAQF++FY
Sbjct: 301 LGGNVIAETLDSLIVLTFEHLESCERDGRLNEVFDILLLSFQRTVLTAYKSKFAQFVIFY 360

Query: 361 ACSLDPEVCGARFAVSLADMFVSCNDPPLIRMSAVSYLASFLSRGKFLTTSLVTTILKRL 420
           ACSLDPEVCGARFAVSLADMFVSCNDPPLIRMSAVSYLASFLSRGKFLTTSLVTTILKRL
Sbjct: 361 ACSLDPEVCGARFAVSLADMFVSCNDPPLIRMSAVSYLASFLSRGKFLTTSLVTTILKRL 420

Query: 421 VDWCLEYGKTLNVDPNPKAHKVFYSGCQAIMYVLCFRMRSILEIPRLKSQLLLMPIGPLL 480
           VDWCLEYG+TLNVDPNPKAHKVFYSGCQAIMYVLCFRMRSILEIPRLKSQLLLMPIGPLL
Sbjct: 421 VDWCLEYGETLNVDPNPKAHKVFYSGCQAIMYVLCFRMRSILEIPRLKSQLLLMPIGPLL 480

Query: 481 THRLSPLKVCLPSIVEEFLRQAKVANLFTPSETFIFNGLLESDYSRSFGGLERLDMFFPF 540
           THRLSPLKVCLPSIVEEFL+QAKVANLFTPSETFIFNGLLES+YSRSFGGLERLDMFFPF
Sbjct: 481 THRLSPLKVCLPSIVEEFLQQAKVANLFTPSETFIFNGLLESEYSRSFGGLERLDMFFPF 540

Query: 541 DPCLLKKCDR---------------------------------------IDENLMDDEAM 567
           DPCLLKKCDR                                       I+ENLMDD AM
Sbjct: 541 DPCLLKKCDRYLRPHFVYWSMVRPTYAEEEEQEEDGGSSDEDAEVFPDIIEENLMDDVAM 600

[Close]

BLAST of Chy6G106970 vs. NCBI nr
Match: XP_038896673.1 (RNA polymerase I-specific transcription initiation factor RRN3-like [Benincasa hispida])

HSP 1 Score: 1016 bits (2628), Expect = 0.0
Identity = 526/608 (86.51%), Postives = 551/608 (90.62%), Query Frame = 0


Query: 1   MGAELENNQAQLHAMEDINLTDAQLVDFIRGFLSSVSLGDIDGYNQLVGVIHHRDRLSPD 60
           MGAE EN QAQLH MED+NLTDAQLVDFIRGFLSSVSLGD DGYNQL+GVIHH+DRLSPD
Sbjct: 1   MGAEFENGQAQLHDMEDVNLTDAQLVDFIRGFLSSVSLGDNDGYNQLIGVIHHKDRLSPD 60

Query: 61  EVALLVTCLKALSGAVSCIDIILHESLLAAIFKMSLWDYGPNVMDALIELIISLAVSNGK 120
           E+ALLVTCLKALSGAVSCIDIILHESLL+AIFKMSLWDYGPNVMDALIELIISLAVS+G 
Sbjct: 61  EIALLVTCLKALSGAVSCIDIILHESLLSAIFKMSLWDYGPNVMDALIELIISLAVSSGN 120

Query: 121 YVDSCLDMLVNNFMPPNSYMDFLKKPHGLTIKEEVLSRVHTALKDISDLVPLAPLRLEQK 180
           YVDSCLDMLVNNFMPP SY DFLKKPHGLT K+EVLSRVHTALKDISDLVPLAPLRLEQ 
Sbjct: 121 YVDSCLDMLVNNFMPPYSYKDFLKKPHGLTRKDEVLSRVHTALKDISDLVPLAPLRLEQI 180

Query: 181 VVHKMQRVFFNESLTTIYVENMLRLEKGALSEFVGRKILTALVDKLLDLDVEIGWDDILK 240
           VVHKMQRVFF ESLTTIYVENMLRLEKGA+SEFVGRKILTALVDKLLDLDVEIGWDDIL+
Sbjct: 181 VVHKMQRVFFKESLTTIYVENMLRLEKGAMSEFVGRKILTALVDKLLDLDVEIGWDDILQ 240

Query: 241 DDFSKGIFEMELEDDDDTTDDINEDSSELPRELSRRSLGGNVIAETLDSLIVLTFEHLES 300
           DDFSKGIFEMELEDDD+T DD NEDSSELPRELSR+SLGGNVIAETLDSLIVLTFEHLES
Sbjct: 241 DDFSKGIFEMELEDDDETADDSNEDSSELPRELSRKSLGGNVIAETLDSLIVLTFEHLES 300

Query: 301 CERDGRLNEVFDILLLSFQRTVLTAYKSKFAQFIVFYACSLDPEVCGARFAVSLADMFVS 360
           CERDGRLNEVFDILLLSFQRTVLTAYKSKFAQF++FYAC+L PEVCG RFAVSLADMFVS
Sbjct: 301 CERDGRLNEVFDILLLSFQRTVLTAYKSKFAQFVIFYACALYPEVCGERFAVSLADMFVS 360

Query: 361 CNDPPLIRMSAVSYLASFLSRGKFLTTSLVTTILKRLVDWCLEYGKTLNVDPNPKAHKVF 420
           CNDPPL RMSAVSYLAS+LSRGKFL+TSLVT+ILKRLVDWCLEYGKTL+V+PNPKAHKVF
Sbjct: 361 CNDPPLTRMSAVSYLASYLSRGKFLSTSLVTSILKRLVDWCLEYGKTLDVEPNPKAHKVF 420

Query: 421 YSGCQAIMYVLCFRMRSILEIPRLKSQLLLMPIGPLLTHRLSPLKVCLPSIVEEFLRQAK 480
           YSGCQAIMYVLCFRMRSILEIPRLKSQLLLMPIGP+LTHRLSPLKVCLPSIVEEFLRQAK
Sbjct: 421 YSGCQAIMYVLCFRMRSILEIPRLKSQLLLMPIGPVLTHRLSPLKVCLPSIVEEFLRQAK 480

Query: 481 VANLFTPSETFIFNGLLESDYSRSFGGLERLDMFFPFDPCLLKKCDR------------- 540
           VANLFTPSET++FNGLLESDYSR+FGG+ERLDMFFPFDPCLLKKCDR             
Sbjct: 481 VANLFTPSETYVFNGLLESDYSRTFGGIERLDMFFPFDPCLLKKCDRYLRPHFVYWSMVR 540

Query: 541 ------------------------IDENLMDDEAMARSYDDQDFDLD---SGLNKMSITP 568
                                   I+ENLMDDEAMARSYDDQDFDLD   S LN MSITP
Sbjct: 541 PTYDEEEGDGGSSDEDVAEVFPDRIEENLMDDEAMARSYDDQDFDLDEFDSALNNMSITP 600

[Close]

BLAST of Chy6G106970 vs. TAIR 10
Match: AT2G34750.1 (RNA polymerase I specific transcription initiation factor RRN3 protein )

HSP 1 Score: 542.3 bits (1396), Expect = 7.2e-154
Identity = 299/594 (50.34%), Postives = 410/594 (69.02%), Query Frame = 0


Query: 1   MGA-ELENNQAQLHAME----DINLTDAQLVDFIRGFLSSVSLGDIDGYNQLVGVIHH-- 60
           MGA EL ++ + L  +E    +++L+D QLV  +R  L+SV  GD D Y+++VGV+    
Sbjct: 1   MGAVELMSDPSSLCTVENYVDNVDLSDTQLVQTVRKALTSVKTGDSDLYSEMVGVMARDI 60

Query: 61  RDRLSPDEVALLVTCLKALSGAVSCIDIILHESLLAAIFKMSLWDYGPNVMDALIELIIS 120
           ++   PD VA L T LKALSGAV+CID++ H+ LL+A+F+M LWD+ P+VMDAL+ L+IS
Sbjct: 61  KEFKDPDVVAQLETVLKALSGAVACIDVLHHQKLLSALFRMKLWDHRPDVMDALVNLVIS 120

Query: 121 LAVSNGKYVDSCLDMLVNNFMPPNSYMDFLKKPHGLTIKEEVLSRVHTALKDISDLVPLA 180
           LAV++GKY+DSCL+MLV+NF+PP   ++ L     L  K +VLSRVH AL  IS LVPL 
Sbjct: 121 LAVTSGKYLDSCLNMLVSNFVPPPWVVNNLSHSRILNKKIDVLSRVHAALLKISILVPLT 180

Query: 181 PLRLEQKVVHKMQRVFFNESLTTIYVENMLRLEKGALSEFVGRKILTALVDKLLDLDVEI 240
           P RL   +  +M ++   +    IYVE++L+LE  ++ +  G  IL  ++++L DLD+EI
Sbjct: 181 PSRLVPMLFQQMPKMHKKDHSIVIYVESLLKLENSSIGQVGGSMILGMVMERLRDLDLEI 240

Query: 241 GWDDILKDDFSKGIFEMELEDDDDTTDDINEDSSELP-RELSRRSLGGNVIAETLDSLIV 300
            WDDI +DD S+G+F+MELED  + T     D  ELP   L + +  G+++++ LD L+V
Sbjct: 241 EWDDIPQDDSSRGMFDMELEDAAEGT---MNDGDELPVGPLKQDTSDGSIVSKLLDKLMV 300

Query: 301 LTFEHLESCERDGRLNEVFDILLLSFQRTVLTAYKSKFAQFIVFYACSLDPEVCGARFAV 360
           + FEHLESC+ DGRL++VF+ L  SF+  +L  YKSKF QF++FYACSLDPE CG +FA 
Sbjct: 301 VAFEHLESCQNDGRLDQVFESLFKSFENFILNTYKSKFTQFLIFYACSLDPENCGVKFAS 360

Query: 361 SLADMFVSCNDPPLIRMSAVSYLASFLSRGKFLTTSLVTTILKRLVDWCLEYGKTLNVDP 420
            L ++F+S N     RMSAV+YLASFL+RGKFL  S V ++LKRL+D C+ Y +T N D 
Sbjct: 361 KLVEIFLSSNKHVATRMSAVAYLASFLARGKFLPVSFVASMLKRLIDECVGYCRTCNDDT 420

Query: 421 NPKAHKVFYSGCQAIMYVLCFRMRSILEIPRLKSQLLLMPIGPLLTHRLSPLKVCLPSIV 480
            P+AH++F+SGCQAIMYVLCFRMRSIL++PR +SQ  L P+  +L H+L+PL VCLPS+V
Sbjct: 421 RPEAHQIFFSGCQAIMYVLCFRMRSILDVPRFRSQ--LTPLESILMHKLNPLMVCLPSVV 480

Query: 481 EEFLRQAKVANLFTPSETFIFNGLLESDYSRSFGGLERLDMFFPFDPCLLKKCDRI---- 540
            EFLRQAK   LF  S++FIF+ LLES+ SR+FGG ERLD FFPFDPCLLK  +      
Sbjct: 481 AEFLRQAKEGGLFIVSDSFIFDDLLESELSRAFGGFERLDTFFPFDPCLLKSSNSFISPN 540

Query: 541 -----------DENLMDDEAMA------RSYDDQDFDLDSGLNKMSITPRNSLQ 566
                      DE+  D++A         S +D + DLD  LNKMSITP++S +
Sbjct: 541 FIYWSMVKATYDEDDDDNDAEVIVNGDEDSDEDDEADLDYALNKMSITPKHSFK 589

[Close]

BLAST of Chy6G106970 vs. TAIR 10
Match: AT1G30590.1 (RNA polymerase I specific transcription initiation factor RRN3 protein )

HSP 1 Score: 478.4 bits (1230), Expect = 1.3e-134
Identity = 276/577 (47.83%), Postives = 373/577 (64.64%), Query Frame = 0


Query: 13  HAMEDINLTDAQLVDFIRGFLSSVSLGDIDGYNQLVGVIHHRDRLSPDEVALLVTCLKAL 72
           +AM++   TD  LV  +R  L+SV  GD D Y+QL  V+   +    D VA L T LK+L
Sbjct: 14  NAMDNAEYTDTDLVFAVRKALASVQNGDTDDYSQLKTVMCLTEDADFDAVAQLETVLKSL 73

Query: 73  SGAVSCIDIILHESLLAAIFKMSLW--DYGPNVMDALIELIISLAVSNGKYVDSCLDMLV 132
           S +V+ ID++ H+ LL A   MSLW   + P+VMDAL++LIISLA ++GKY+D CL+MLV
Sbjct: 74  SVSVAWIDLVHHKDLLEA---MSLWYHSHRPSVMDALVDLIISLAATSGKYLDPCLNMLV 133

Query: 133 NNFMPPNSYMDFLKKPHGLTIKEEVLSRVHTALKDISDLVPLAPLRLEQKVVHKMQRVFF 192
            NF  P ++   + +   +   +EV  RVH AL  IS L+PLAP  L   +   M+++  
Sbjct: 134 RNFSQP-TFKHKVSQTQLVKKMQEVHPRVHAALHKISYLIPLAPWNLVSILAQNMRKIDK 193

Query: 193 NESLTTIYVENMLRLEKGALSEFVGRKILTALVDKLLDLDVEIGWDDILKDDFSKGIFEM 252
            +     YV+N+LRLE  ++ E VG  IL  +++++LDLD+  G      DD + G+F+M
Sbjct: 194 KDPSIVTYVDNLLRLENSSIGEVVGSVILMMVMERMLDLDLVSGC-----DDSNGGMFDM 253

Query: 253 ELEDDDDTTDDINEDSSELPRELSRRSLGGNVIAETLDSLIVLTFEHLESCERDGRLNEV 312
           ELED  ++T  +NE        L + + GGNV++E LD L+VL F HLESC+   RL+EV
Sbjct: 254 ELEDAVEST--MNEGDEFPVGALKQNTSGGNVVSELLDKLMVLFFHHLESCQNSDRLDEV 313

Query: 313 FDILLLSFQRTVLTAYKSKFAQFIVFYACSLDPEVCGARFAVSLADMFVSCNDPPLIRMS 372
           F+IL  SF+  +L  YK+KF+QF++FYACSLDPE CG RFA  L D+++S N   L RMS
Sbjct: 314 FEILFKSFENYILNTYKTKFSQFLMFYACSLDPENCGVRFASKLLDIYLSSNTCRLTRMS 373

Query: 373 AVSYLASFLSRGKFLTTSLVTTILKRLVDWCLEYGKTLNVDPNPKAHKVFYSGCQAIMYV 432
           AV+YLAS+LSRGKFL  S V ++LKRLVD C EY  T N D  P+AH+VFYSGCQAI+YV
Sbjct: 374 AVAYLASYLSRGKFLPASFVASMLKRLVDECAEYCGTCNDDVKPEAHQVFYSGCQAILYV 433

Query: 433 LCFRMRSILEIPRLKSQLLLMPIGPLLTHRLSPLKVCLPSIVEEFLRQAKVANLFTPSET 492
           LCFRMRSI+EIPR +SQ     +  +L+H+L+PL VCLPS+V EFL+QAK   LF  SE+
Sbjct: 434 LCFRMRSIVEIPRFQSQ--FRSLESILSHKLNPLLVCLPSVVSEFLKQAKAGGLFIVSES 493

Query: 493 FIFNGLLESDYSRSFGGLERLDMFFPFDPCLLKKC------------------------D 552
           FIF+ L ES+ SR+FGG ERLD FFPFDPCLLK                          +
Sbjct: 494 FIFDDLHESELSRAFGGFERLDTFFPFDPCLLKMSSSYISPNFNFWSMVKTTYGEDGDEE 553

Query: 553 RIDENLMDDEAMARSYDDQDFDLDSGLNKMSITPRNS 564
             DE +++ +A +    D D +LDS +N MS TP++S
Sbjct: 554 LCDEVIVNGDADSAEEPDDDVELDSEMNTMSTTPKHS 577

[Close]

BLAST of Chy6G106970 vs. TAIR 10
Match: AT2G39240.1 (RNA polymerase I specific transcription initiation factor RRN3 protein )

HSP 1 Score: 400.6 bits (1028), Expect = 3.4e-111
Identity = 245/585 (41.88%), Postives = 346/585 (59.15%), Query Frame = 0


Query: 15  MEDINLTDAQLVDFIRGFLSSVSLGDIDGYNQLVGVIHHRDRLSPDE------------- 74
           +E  +L+D  LV  IR  L+S   GD D YN+LV +++ + + S D+             
Sbjct: 6   VETADLSDKALVSAIREVLASAQSGDTDQYNELVQLMYIKKKKSGDDAMAQPEVPDDVDV 65

Query: 75  VALLVTCLKALSGAVSCIDIILHESLLAAIFKMSLWDYGPNVMDALIELIISLAVSNGKY 134
           VA   T LK LS +V+C+D + H  LL  I    +WD+ PNV+ AL++LIISLA ++GK+
Sbjct: 66  VAQRETLLKILSHSVACLDDVHHNHLLQLILGTRIWDHKPNVIYALLDLIISLATTSGKH 125

Query: 135 VDSCLDMLVNNFMPPNSYMDFLKKPHGLTIKE-EVLSRVHTALKDISDLVPLAPLRLEQK 194
           + SCLD LV+N            +P  L  K  EVLSRVH AL  IS LVPLAP  L   
Sbjct: 126 LSSCLDTLVSNLR---------SQPRKLDNKMLEVLSRVHAALHKISYLVPLAPSILLPI 185

Query: 195 VVHKMQRVFFNESLTTI--YVENMLRLEKGA-LSEFVGRKILTALVDKLLDLDVEIGWDD 254
           +   M  V     L  +  YV+N+L+LE  + + + VG+ IL  ++ +  DLD EI  DD
Sbjct: 186 LAQSMPSVHDKARLQVVVPYVKNLLKLENSSIIGKVVGKDILMMVMGRFRDLDSEIECDD 245

Query: 255 ILKDDFSKGIFEMELEDDDDTTDDINEDSSELPRELSRRSLGGNVIAETLDSLIVLTFEH 314
            L++D S  +F+MEL+                       ++ G ++++ LD L+V +F H
Sbjct: 246 NLQNDSSLAMFDMELD----------------------VAVEGTLVSKLLDDLMVESFNH 305

Query: 315 LESCERDGRLNEVFDILLLSFQRTVLTAYKSKFAQFIVFYACSLDPEVCGARFAVSLADM 374
           L+SC+  GRL+EVF+ L  SF+  +L   K KF+QF++FYACSLDPE CG +FA  L + 
Sbjct: 306 LKSCQDAGRLDEVFENLFESFENLILNTQKLKFSQFLMFYACSLDPENCGVKFASKLLEK 365

Query: 375 FVSCNDPPLIRMSAVSYLASFLSRGKFLTTSLVTTILKRLVDWCLEYGKTLNVDPNPKAH 434
           F+S N+  + R +AV+YLAS+L+R  FL+ S V ++LKRLVD C +Y +T N D  P+ H
Sbjct: 366 FLSSNNNQVTRTNAVTYLASYLARANFLSASFVASMLKRLVDECADYCRTCNDDARPEVH 425

Query: 435 KVFYSGCQAIMYVLCFRMRSILEIPRLKSQLLLMPIGPLLTHRLSPLKVCLPSIVEEFLR 494
           +VFYSGCQAI+YVLCFRMRSILE+P  +SQ  L P+  +L+H+L PL+VCL S+V EFL 
Sbjct: 426 QVFYSGCQAILYVLCFRMRSILEVPHFQSQ--LTPLESVLSHKLDPLRVCLSSVVSEFLI 485

Query: 495 QAKVANLFTPSETFIFNGLLESDYSRSFGGLERLDMFFPFDPCLLKKCDRIDENLMDDEA 554
           QAK   LF  S+ FIF+ L ES+ SR+ GG      FFPF   L K    I  + +    
Sbjct: 486 QAKACGLFIVSDAFIFDDLSESELSRALGG------FFPFPWLLEKSNSLISPHFIKRSE 545

Query: 555 MARSYD----------------DQDFDLDSGLNKMSITPRNSLQY 567
           + ++Y+                D D D D+ +NKMSITP++S+ +
Sbjct: 546 VKKTYEQAEVTVYGDTDNEEDSDDDVDPDNEMNKMSITPKHSVMH 551

[Close]

BLAST of Chy6G106970 vs. TAIR 10
Match: AT1G01690.1 (putative recombination initiation defects 3 )

HSP 1 Score: 194.5 bits (493), Expect = 3.7e-49
Identity = 131/370 (35.41%), Postives = 213/370 (57.57%), Query Frame = 0


Query: 553 LNKMSITPRNSLQYRRLNALTTGQQASQLRSQPSQQSFSQGLSSQH---GMYSQLSQNSF 612
           L  +S+ P N      L      Q + QLRSQ SQQSFSQG SS     G +SQ++Q+S 
Sbjct: 11  LKSISVFPPN------LRRSAEPQASQQLRSQQSQQSFSQGPSSSQRGCGGFSQMTQSSI 70

Query: 613 DEVVTNEQRFSSQDRENSIKK-NSFFPPLSYSKEDCQLGISKSSNSLTQKWRPSPLPDSK 672
           DE++ N+QRFSSQ+R+ S+KK +S  PP+++ +ED QL  S+SS+ L+++W  + + +SK
Sbjct: 71  DELLINDQRFSSQERDLSLKKVSSCLPPINHKREDSQLVASRSSSGLSRRWSSASIGESK 130

Query: 673 CQVGEELDRRLGTIENSLNKFGKILDSLLSDILQLNKGMKQVSLDVESIWQKMLVNSSSL 732
            Q+ EEL++R G +E SL++FG +LDS+ SDI+Q N+G K+V L+ E I QK+ +  +SL
Sbjct: 131 SQISEELEQRFGMMETSLSRFGMMLDSIQSDIMQANRGTKEVFLETERIQQKLTLQDTSL 190

Query: 733 QSMNKDHDDMKAIIDGGFKLISDQLKKDAYQERLHEISDFLSSLEKQVQASQLKLKNDFI 792
           Q + K+  D KA +DGG K I ++  KD  QE+L +I   L+++ +QV+ +  K++ +  
Sbjct: 191 QQLRKEQADSKASLDGGVKFILEEFSKDPNQEKLQKILQMLTTIPEQVETALQKIQREIC 250

Query: 793 STFTKEMKAMIS-TLKNPLQKFPPHSIQSPESNACLDAPKQKQRRCKIQSA----APNVC 852
            TFT+E++ + S     P  + P     +P+  A  + P+Q+ +  K+ ++     P V 
Sbjct: 251 HTFTREIQVLASLRTPEPRVRVP----TAPQVKAKENLPEQRGQAAKVLTSLKMPEPRVQ 310

Query: 853 TQATAVQKEEVGMWKS-VKVGKAFCTSSVVKRDDPNKVIPFSEQICWTRVQGKFVSPRY- 909
             A    KE     +  V    +FC ++ +K   P    P +      R    ++SP+  
Sbjct: 311 VPAAPQAKENFPEQRGPVAKSNSFC-NTTLKTKQPQ--FPRNPNDASARAVKPYLSPKIQ 367

The following BLAST results are available for this feature:

BLAST of Chy6G106970 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q0WWX5	5.2e-48	35.41	Putative recombination initiation defects 3 OS=Arabidopsis thaliana OX=3702 GN=P...	[more]
B2RS91	1.2e-33	27.44	RNA polymerase I-specific transcription initiation factor RRN3 OS=Mus musculus O...	[more]
Q5R4N9	9.2e-29	27.39	RNA polymerase I-specific transcription initiation factor RRN3 OS=Pongo abelii O...	[more]
Q9NYV6	6.0e-28	26.82	RNA polymerase I-specific transcription initiation factor RRN3 OS=Homo sapiens O...	[more]
Q10110	6.2e-25	25.13	RNA polymerase I-specific transcription initiation factor rrn3 OS=Schizosaccharo...	[more]

BLAST of Chy6G106970 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L7G6	0.0e+00	92.09	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G122360 PE=3 SV=1	[more]
A0A1S3AV30	2.6e-305	90.26	RNA polymerase I-specific transcription initiation factor RRN3 OS=Cucumis melo O...	[more]
A0A5D3D051	2.6e-305	90.26	RNA polymerase I-specific transcription initiation factor RRN3 OS=Cucumis melo v...	[more]
A0A5A7U3Y2	2.3e-301	86.96	RNA polymerase I-specific transcription initiation factor RRN3 OS=Cucumis melo v...	[more]
A0A6J1F0A3	6.1e-278	82.07	RNA polymerase I-specific transcription initiation factor RRN3-like isoform X1 O...	[more]

BLAST of Chy6G106970 vs. NCBI nr


Match Name	Identity	Description
KAE8650250.1	96.52	hypothetical protein Csa_010750 [Cucumis sativus]	[more]
XP_004133864.1	92.09	RNA polymerase I-specific transcription initiation factor RRN3 [Cucumis sativus]...	[more]
XP_008438040.1	90.26	PREDICTED: RNA polymerase I-specific transcription initiation factor RRN3 [Cucum...	[more]
KAA0048966.1	86.96	RNA polymerase I-specific transcription initiation factor RRN3 [Cucumis melo var...	[more]
XP_038896673.1	86.51	RNA polymerase I-specific transcription initiation factor RRN3-like [Benincasa h...	[more]

BLAST of Chy6G106970 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G34750.1	7.2e-154	50.34	RNA polymerase I specific transcription initiation factor RRN3 protein	[more]
AT1G30590.1	1.3e-134	47.83	RNA polymerase I specific transcription initiation factor RRN3 protein	[more]
AT2G39240.1	3.4e-111	41.88	RNA polymerase I specific transcription initiation factor RRN3 protein	[more]
AT1G01690.1	3.7e-49	35.41	putative recombination initiation defects 3	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007991	RNA polymerase I specific transcription initiation factor RRN3	PFAM	PF05327	RRN3	coord: 20..528 e-value: 5.2E-115 score: 385.1
IPR007991	RNA polymerase I specific transcription initiation factor RRN3	PANTHER	PTHR12790	TRANSCRIPTION INITIATION FACTOR IA RRN3	coord: 6..565
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 575..597

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy6G106970.1	Chy6G106970.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006361	transcription initiation from RNA polymerase I promoter
biological_process	GO:0006413	translational initiation
cellular_component	GO:0005634	nucleus
molecular_function	GO:0001042	RNA polymerase I core binding
molecular_function	GO:0001181	RNA polymerase I general transcription initiation factor activity
molecular_function	GO:0003743	translation initiation factor activity