Chy6G106690 (gene) Cucumber (hystrix) v1

Overview


Name	Chy6G106690
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	RING-type domain-containing protein
Location	chrH06: 912301 .. 913804 (-)
RNA-Seq Expression	Chy6G106690
Synteny	Chy6G106690

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCCTCCCCTTCTTCCACTTATTCCTTCTCCAGGATCGGCCTCGGCTACTCCATTGCCATAGCACTCGCCTTCCTCGTCCTCCTCTCCGCCCTTCTCCTCGCTTTCTACGTCTGCTGTCGCGCATCCCGTTCCCGCCACCTCCGCCGCCCTCCCCCTCCTTCTTCCCGCTCCGACGCCGGCATCATTCTCCCCCAGATCATTTTCGTTGCTGAGGATGACGCCGCTCCAGATCGCGACGATGACAACGGGGTTGTGGGTCTTGACCAGTCCGTTATTAACTCTTACCCTAAATTCCCTTTCTCCAGAGATAAATCCATGGCTGGAGCTAATTGTGTCTGCTCTATCTGTCTCTGTGAGTATAAGGATGCGGAGATGTTGAGGATGATGCCTGAGTGTAGACACTACTTCCATCTCTGTTGCATCGATGCTTGGTTGAAGCTTAATGGTTCTTGTCCGGTTTGTCGGAATTCGCCACTCCCAACTCCGCTTTCTACTCCTCTTCAAGAGGTTGTTCCACTCTCTCAATACATGGCGGATCGGAGAAGGAGATGACTCATTCATTGGTATTGCATCGATTAGGTTCTTCTTTTACTTCTCTTCTCTTGATTTTCATATTTCTCTGTTTGTTTTTGCCTGTTTTTACTCTTAAGAAATTGTAAATTCTTTGGTTAGATCCTTAGTTTTTTTTCTTCTTATTCTGAATGTTCTAGTAACTGTTCGACCCATAGATGAAATTTTCGATTTACTTTTTGATCAATTTTCTGAGTGGTCATGAATCAATATTCTTGTGTAGATCTGATAGTGTTGGATTCAATTATTCGAAAATTTTGAGACAAGAAGAACTTTTCCATTTCTCTTCCTTACTTTTTGAGCGAAAAAAGTTGGATTGACCCATCTCAAGGGTCCTCTTCATTTTCACTGTTGTCTGCTTAAGCTGGCCCAGAATGTCTTGTTGCATCCATTTTTTTCCCGTTTCAAAATTTCAACTCCATCATCATTTGCTAATGGGTTTGGTAAAGCGTGCAAAAAAAAAGGGGGGGGGGGGGGGGCTGCGCAGGGGAAATCCTCTTGTTTTTCCCTTTCTTCTTAATAAACCTGTTGACATTGAGAAGTAGAACTGTTGATGGGGTTTTTCAATTTCTTCATCATACCTCTGTTCTTTAGTTCTAAATCATCTTGGAGAATGGAGACACCGAATCCTCTGTTTTGAAGTTGGATTTGGAAGAAGAACTAGAAGGGTTTTGGTATAGATGTGAGTTGGAATGATTGGATTATTATTTTGAATAGGGATTGTGTATGATTTCACTAAATTTTAAAAGGACTGAAACACACTCGAGATTGAACTTCACTTTAGCATTTGCTTTTGTTCTCTTTTTTAGTCCTTCAACAGTGGAGGATTACTGATGATATTATGATTTGGATAGGCATCTTGGTTACCTTTCCCGAGTTCAATCATGAACCCATTGATTTCACTGCTTTTTCTCTGCAAATTTCAGACTAG

mRNA sequence

ATGTCCTCCCCTTCTTCCACTTATTCCTTCTCCAGGATCGGCCTCGGCTACTCCATTGCCATAGCACTCGCCTTCCTCGTCCTCCTCTCCGCCCTTCTCCTCGCTTTCTACGTCTGCTGTCGCGCATCCCGTTCCCGCCACCTCCGCCGCCCTCCCCCTCCTTCTTCCCGCTCCGACGCCGGCATCATTCTCCCCCAGATCATTTTCGTTGCTGAGGATGACGCCGCTCCAGATCGCGACGATGACAACGGGGTTGTGGGTCTTGACCAGTCCGTTATTAACTCTTACCCTAAATTCCCTTTCTCCAGAGATAAATCCATGGCTGGAGCTAATTGTGTCTGCTCTATCTGTCTCTGTGAGTATAAGGATGCGGAGATGTTGAGGATGATGCCTGAGTGTAGACACTACTTCCATCTCTGTTGCATCGATGCTTGGTTGAAGCTTAATGGTTCTTGTCCGGTTTGTCGGAATTCGCCACTCCCAACTCCGCTTTCTACTCCTCTTCAAGAGTGGAGGATTACTGATGATATTATGATTTGGATAGGCATCTTGGTTACCTTTCCCGAGTTCAATCATGAACCCATTGATTTCACTGCTTTTTCTCTGCAAATTTCAGACTAG

Coding sequence (CDS)

ATGTCCTCCCCTTCTTCCACTTATTCCTTCTCCAGGATCGGCCTCGGCTACTCCATTGCCATAGCACTCGCCTTCCTCGTCCTCCTCTCCGCCCTTCTCCTCGCTTTCTACGTCTGCTGTCGCGCATCCCGTTCCCGCCACCTCCGCCGCCCTCCCCCTCCTTCTTCCCGCTCCGACGCCGGCATCATTCTCCCCCAGATCATTTTCGTTGCTGAGGATGACGCCGCTCCAGATCGCGACGATGACAACGGGGTTGTGGGTCTTGACCAGTCCGTTATTAACTCTTACCCTAAATTCCCTTTCTCCAGAGATAAATCCATGGCTGGAGCTAATTGTGTCTGCTCTATCTGTCTCTGTGAGTATAAGGATGCGGAGATGTTGAGGATGATGCCTGAGTGTAGACACTACTTCCATCTCTGTTGCATCGATGCTTGGTTGAAGCTTAATGGTTCTTGTCCGGTTTGTCGGAATTCGCCACTCCCAACTCCGCTTTCTACTCCTCTTCAAGAGTGGAGGATTACTGATGATATTATGATTTGGATAGGCATCTTGGTTACCTTTCCCGAGTTCAATCATGAACCCATTGATTTCACTGCTTTTTCTCTGCAAATTTCAGACTAG

Protein sequence

MSSPSSTYSFSRIGLGYSIAIALAFLVLLSALLLAFYVCCRASRSRHLRRPPPPSSRSDAGIILPQIIFVAEDDAAPDRDDDNGVVGLDQSVINSYPKFPFSRDKSMAGANCVCSICLCEYKDAEMLRMMPECRHYFHLCCIDAWLKLNGSCPVCRNSPLPTPLSTPLQEWRITDDIMIWIGILVTFPEFNHEPIDFTAFSLQISD*

Homology

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BLAST of Chy6G106690 vs. ExPASy Swiss-Prot
Match: O82353 (RING-H2 finger protein ATL67 OS=Arabidopsis thaliana OX=3702 GN=ATL67 PE=2 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 2.1e-53
Identity = 110/165 (66.67%), Postives = 125/165 (75.76%), Query Frame = 0


Query: 13  IGLGYSIAIALAFLVLLSALLLAFYVCCRASRSRHLRRPPPPSSRSDAG--IILPQIIFV 72
           +G GYSIAIAL FLVLLS +LL+ Y+CCR SR    RR     S  D G  +ILP+IIFV
Sbjct: 33  LGFGYSIAIALGFLVLLSTVLLSSYICCRDSR----RRTTAVESTGDRGGSVILPRIIFV 92

Query: 73  AEDDAAPDRDDDNGVVGLDQSVINSYPKFPFSRDKSMA-------GANCVCSICLCEYKD 132
           AE+D   D +  + VVGLDQ+VINSYPKF FS+D S A       G +  CSICLCEYK+
Sbjct: 93  AEED-NEDLEAGDVVVGLDQAVINSYPKFHFSKDTSAASSDGFGGGGDTTCSICLCEYKE 152

Query: 133 AEMLRMMPECRHYFHLCCIDAWLKLNGSCPVCRNSPLPTPLSTPL 169
           AEMLRMMPEC+HYFHLCC+DAWLKLNGSCPVCRNSPLPTP STPL
Sbjct: 153 AEMLRMMPECKHYFHLCCLDAWLKLNGSCPVCRNSPLPTPTSTPL 192

[Close]

BLAST of Chy6G106690 vs. ExPASy Swiss-Prot
Match: Q9M313 (RING-H2 finger protein ATL68 OS=Arabidopsis thaliana OX=3702 GN=ATL68 PE=2 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 2.4e-49
Identity = 106/178 (59.55%), Postives = 125/178 (70.22%), Query Frame = 0


Query: 4   PSSTYSFSRIGLGYSIAIALAFLVLLSALLLAFYVCCRASR---SRHLRRPPPPSSRSDA 63
           P  TY  + +GLGYSIAIAL FLVL+S ++L+ Y+CCRASR   S         +S SD 
Sbjct: 16  PIPTY-ITSLGLGYSIAIALGFLVLISTIILSSYICCRASRLRFSASAANANANASFSDR 75

Query: 64  GIILPQIIFVAEDDAAPDRDDDNGVV-GLDQSVINSYPKFPFSRDKSMA----------G 123
           G+I+P+IIFVAEDD   D +  N VV GLD SVINSYPKF F++D +            G
Sbjct: 76  GVIVPRIIFVAEDD---DLESGNVVVGGLDHSVINSYPKFHFTKDITAVVNGDGFHDGEG 135

Query: 124 ANCVCSICLCEYKDAEMLRMMPECRHYFHLCCIDAWLKLNGSCPVCRNSPLPTPLSTP 168
               CSICLCEY + EMLRMMPEC+HYFH+ C+DAWLKLNGSCPVCRNSPLPTP STP
Sbjct: 136 RETTCSICLCEYMEEEMLRMMPECKHYFHVYCLDAWLKLNGSCPVCRNSPLPTPQSTP 189

[Close]

BLAST of Chy6G106690 vs. ExPASy Swiss-Prot
Match: Q8RX29 (RING-H2 finger protein ATL70 OS=Arabidopsis thaliana OX=3702 GN=ATL70 PE=2 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 6.3e-26
Identity = 66/157 (42.04%), Postives = 85/157 (54.14%), Query Frame = 0


Query: 14  GLGYSIAIALAFLVLLSALLLAFYVCCRASRSRHLRRPPPPSSRSDAGIILPQIIFVAED 73
           G  Y I +++  L+L++ + L  Y C R   S       P  +  D+  I      V  D
Sbjct: 63  GFRYGIGVSIGVLLLITTITLTSYYCTRNQLS-----SSPSQTNQDSTRIHHHHHHVIID 122

Query: 74  DAAPDRDDDNGVVGLDQSVINSYPKFPFSRDKSMAGANCVCSICLCEYKDAEMLRMMPEC 133
                      V GLD+  I SYPK  +S  K    A+C C+ICL +YK   +LR +P+C
Sbjct: 123 ----------VVPGLDEDTIQSYPKILYSEAKGPTTASC-CAICLGDYKGKHLLRQLPDC 182

Query: 134 RHYFHLCCIDAWLKLNGSCPVCRNSPLPTPLSTPLQE 171
            H FHL CID WL+LN +CPVCR SPLPTPLSTPL E
Sbjct: 183 NHLFHLKCIDTWLRLNPTCPVCRTSPLPTPLSTPLAE 203

[Close]

BLAST of Chy6G106690 vs. ExPASy Swiss-Prot
Match: Q9FL42 (Putative RING-H2 finger protein ATL69 OS=Arabidopsis thaliana OX=3702 GN=ATL69 PE=3 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 7.0e-25
Identity = 64/161 (39.75%), Postives = 93/161 (57.76%), Query Frame = 0


Query: 11  SRIGLGYSIAIALAFLVLLSALLLAFYVCCRASRSRHLRRPPPPSSRSDAGIILPQIIFV 70
           S +GLGY IAIA++ LVL+S ++LA Y+C R+  +          + SD  + LP     
Sbjct: 9   SGVGLGYGIAIAVSILVLISFIMLASYICIRSKSTGR------DEATSDVVLDLP----- 68

Query: 71  AEDDAAPDRDDDNGVVGLDQSVINSYPKFPFSRDKSMAGA-NCVCSICLCEYKDAEMLRM 130
               AA  +      +GLD+ VI SYP+      + +    N  CSICLC+Y+  E +R 
Sbjct: 69  --SPAAEVK------LGLDRPVIESYPRIVLGDSRRLPRPNNGPCSICLCDYEAREPVRC 128

Query: 131 MPECRHYFHLCCIDAWLKLNGSCPVCRNSPLPTPLSTPLQE 171
           +PEC H FH  C+D WL+ + +CP+CRNSP P+ L+TPL +
Sbjct: 129 IPECNHCFHTDCVDEWLRTSATCPLCRNSPAPSRLATPLSD 150

[Close]

BLAST of Chy6G106690 vs. ExPASy Swiss-Prot
Match: Q9FG21 (Putative RING-H2 finger protein ATL71 OS=Arabidopsis thaliana OX=3702 GN=ATL71 PE=3 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 3.8e-23
Identity = 62/167 (37.13%), Postives = 92/167 (55.09%), Query Frame = 0


Query: 14  GLGYSIAIALAFLVLLSALLLAFYVCCRASRSRHLRRPPPP--SSRSDAGIILP-QIIFV 73
           GL Y I +++  L+L++ + L  Y C R+  S      P      R   G + P Q  F 
Sbjct: 22  GLAYGIGVSIGILMLITTITLTSYYCTRSHISASPTTTPRTRRRQRESNGTLPPGQERFD 81

Query: 74  AEDDAAPDRDDDNGVVGLDQSVINSYPKFP-------FSRDKSMAGANCVCSICLCEYKD 133
            EDD +     +  V+GL + VI  +PK P       +S  K  +  +C CSICL +YK 
Sbjct: 82  FEDDESDTVVVE--VLGLTEEVIKGFPKLPYEEARVSYSLQKESSTTSC-CSICLADYKK 141

Query: 134 AEMLRMMPECRHYFHLCCIDAWLKLNGSCPVCRNSPLPTPLSTPLQE 171
            +M+R++P+C H FH  C+D WL+L+ +CPVCR SPLP+P  TP+ +
Sbjct: 142 MDMIRVLPDCNHLFHDNCVDPWLRLHPTCPVCRTSPLPSPAMTPVAD 185

[Close]

BLAST of Chy6G106690 vs. ExPASy TrEMBL
Match: A0A0A0L7B6 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G121045 PE=4 SV=1)

HSP 1 Score: 349.7 bits (896), Expect = 8.1e-93
Identity = 169/170 (99.41%), Postives = 170/170 (100.00%), Query Frame = 0


Query: 1   MSSPSSTYSFSRIGLGYSIAIALAFLVLLSALLLAFYVCCRASRSRHLRRPPPPSSRSDA 60
           MSSPSSTYSFSRIGLGYSIAIALAFLVLLSALLLAFYVCCRASRSRHLRRPPPPSSRSDA
Sbjct: 1   MSSPSSTYSFSRIGLGYSIAIALAFLVLLSALLLAFYVCCRASRSRHLRRPPPPSSRSDA 60

Query: 61  GIILPQIIFVAEDDAAPDRDDDNGVVGLDQSVINSYPKFPFSRDKSMAGANCVCSICLCE 120
           GIILPQIIFVAEDDAAPDRDDDNGVVGLDQ+VINSYPKFPFSRDKSMAGANCVCSICLCE
Sbjct: 61  GIILPQIIFVAEDDAAPDRDDDNGVVGLDQTVINSYPKFPFSRDKSMAGANCVCSICLCE 120

Query: 121 YKDAEMLRMMPECRHYFHLCCIDAWLKLNGSCPVCRNSPLPTPLSTPLQE 171
           YKDAEMLRMMPECRHYFHLCCIDAWLKLNGSCPVCRNSPLPTPLSTPLQE
Sbjct: 121 YKDAEMLRMMPECRHYFHLCCIDAWLKLNGSCPVCRNSPLPTPLSTPLQE 170

[Close]

BLAST of Chy6G106690 vs. ExPASy TrEMBL
Match: A0A1S3AVV0 (RING-H2 finger protein ATL67 OS=Cucumis melo OX=3656 GN=LOC103483238 PE=4 SV=1)

HSP 1 Score: 345.9 bits (886), Expect = 1.2e-91
Identity = 167/170 (98.24%), Postives = 168/170 (98.82%), Query Frame = 0


Query: 1   MSSPSSTYSFSRIGLGYSIAIALAFLVLLSALLLAFYVCCRASRSRHLRRPPPPSSRSDA 60
           MSSPSSTYSFSRIGLGYSIAIALAFLVLLSALLLAFYVCCRASRSRHLRRPPPP SRS+ 
Sbjct: 1   MSSPSSTYSFSRIGLGYSIAIALAFLVLLSALLLAFYVCCRASRSRHLRRPPPPPSRSET 60

Query: 61  GIILPQIIFVAEDDAAPDRDDDNGVVGLDQSVINSYPKFPFSRDKSMAGANCVCSICLCE 120
           GIILPQIIFVAEDDAAPDRDDDNGVVGLDQSVINSYPKFPFSRDKSMAGANCVCSICLCE
Sbjct: 61  GIILPQIIFVAEDDAAPDRDDDNGVVGLDQSVINSYPKFPFSRDKSMAGANCVCSICLCE 120

Query: 121 YKDAEMLRMMPECRHYFHLCCIDAWLKLNGSCPVCRNSPLPTPLSTPLQE 171
           YKDAEMLRMMPECRHYFHLCCIDAWLKLNGSCPVCRNSPLPTPLSTPLQE
Sbjct: 121 YKDAEMLRMMPECRHYFHLCCIDAWLKLNGSCPVCRNSPLPTPLSTPLQE 170

[Close]

BLAST of Chy6G106690 vs. ExPASy TrEMBL
Match: A0A6J1EYX3 (RING-H2 finger protein ATL67-like OS=Cucurbita moschata OX=3662 GN=LOC111440819 PE=4 SV=1)

HSP 1 Score: 314.3 bits (804), Expect = 3.8e-82
Identity = 154/173 (89.02%), Postives = 164/173 (94.80%), Query Frame = 0


Query: 2   SSPSSTYSFSRIGLGYSIAIALAFLVLLSALLLAFYVCCRASRSRHLR----RPPPPSSR 61
           ++ SS YSF+++GLGY+IAIALAFLVLLSALLLAFYVCCRASRSR+LR    RPPP  SR
Sbjct: 6   TASSSNYSFAKLGLGYAIAIALAFLVLLSALLLAFYVCCRASRSRNLRLSSSRPPP--SR 65

Query: 62  SDAGIILPQIIFVAEDDAAPDRDDDNGVVGLDQSVINSYPKFPFSRDKSMAGANCVCSIC 121
           SDAGIILPQIIFVAEDD APDRDDDNGVVGLDQ+VINSYPKFPFS+DKSMAGANCVCSIC
Sbjct: 66  SDAGIILPQIIFVAEDDGAPDRDDDNGVVGLDQAVINSYPKFPFSKDKSMAGANCVCSIC 125

Query: 122 LCEYKDAEMLRMMPECRHYFHLCCIDAWLKLNGSCPVCRNSPLPTPLSTPLQE 171
           LCEYK+AEMLRMMPECRHYFHLCCIDAWLKLNGSCPVCRNSPLPTPLSTPLQE
Sbjct: 126 LCEYKEAEMLRMMPECRHYFHLCCIDAWLKLNGSCPVCRNSPLPTPLSTPLQE 176

[Close]

BLAST of Chy6G106690 vs. ExPASy TrEMBL
Match: A0A6J1IH02 (RING-H2 finger protein ATL67-like OS=Cucurbita maxima OX=3661 GN=LOC111473352 PE=4 SV=1)

HSP 1 Score: 312.8 bits (800), Expect = 1.1e-81
Identity = 153/173 (88.44%), Postives = 163/173 (94.22%), Query Frame = 0


Query: 2   SSPSSTYSFSRIGLGYSIAIALAFLVLLSALLLAFYVCCRASRSRHLR----RPPPPSSR 61
           ++ SS YSF+++G GY+IAIALAFLVLLSALLLAFYVCCRASRSR+LR    RPPP  SR
Sbjct: 5   TASSSNYSFAKLGFGYAIAIALAFLVLLSALLLAFYVCCRASRSRNLRLSSSRPPP--SR 64

Query: 62  SDAGIILPQIIFVAEDDAAPDRDDDNGVVGLDQSVINSYPKFPFSRDKSMAGANCVCSIC 121
           SDAGIILPQIIFVAEDD APDRDDDNGVVGLDQ+VINSYPKFPFS+DKSMAGANCVCSIC
Sbjct: 65  SDAGIILPQIIFVAEDDGAPDRDDDNGVVGLDQAVINSYPKFPFSKDKSMAGANCVCSIC 124

Query: 122 LCEYKDAEMLRMMPECRHYFHLCCIDAWLKLNGSCPVCRNSPLPTPLSTPLQE 171
           LCEYK+AEMLRMMPECRHYFHLCCIDAWLKLNGSCPVCRNSPLPTPLSTPLQE
Sbjct: 125 LCEYKEAEMLRMMPECRHYFHLCCIDAWLKLNGSCPVCRNSPLPTPLSTPLQE 175

[Close]

BLAST of Chy6G106690 vs. ExPASy TrEMBL
Match: A0A6J1IAW3 (RING-H2 finger protein ATL67-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111473352 PE=4 SV=1)

HSP 1 Score: 312.8 bits (800), Expect = 1.1e-81
Identity = 153/173 (88.44%), Postives = 163/173 (94.22%), Query Frame = 0


Query: 2   SSPSSTYSFSRIGLGYSIAIALAFLVLLSALLLAFYVCCRASRSRHLR----RPPPPSSR 61
           ++ SS YSF+++G GY+IAIALAFLVLLSALLLAFYVCCRASRSR+LR    RPPP  SR
Sbjct: 45  TASSSNYSFAKLGFGYAIAIALAFLVLLSALLLAFYVCCRASRSRNLRLSSSRPPP--SR 104

Query: 62  SDAGIILPQIIFVAEDDAAPDRDDDNGVVGLDQSVINSYPKFPFSRDKSMAGANCVCSIC 121
           SDAGIILPQIIFVAEDD APDRDDDNGVVGLDQ+VINSYPKFPFS+DKSMAGANCVCSIC
Sbjct: 105 SDAGIILPQIIFVAEDDGAPDRDDDNGVVGLDQAVINSYPKFPFSKDKSMAGANCVCSIC 164

Query: 122 LCEYKDAEMLRMMPECRHYFHLCCIDAWLKLNGSCPVCRNSPLPTPLSTPLQE 171
           LCEYK+AEMLRMMPECRHYFHLCCIDAWLKLNGSCPVCRNSPLPTPLSTPLQE
Sbjct: 165 LCEYKEAEMLRMMPECRHYFHLCCIDAWLKLNGSCPVCRNSPLPTPLSTPLQE 215

[Close]

BLAST of Chy6G106690 vs. NCBI nr
Match: KGN56511.2 (hypothetical protein Csa_011308 [Cucumis sativus])

HSP 1 Score: 421 bits (1081), Expect = 1.77e-148
Identity = 202/206 (98.06%), Postives = 205/206 (99.51%), Query Frame = 0


Query: 1   MSSPSSTYSFSRIGLGYSIAIALAFLVLLSALLLAFYVCCRASRSRHLRRPPPPSSRSDA 60
           MSSPSSTYSFSRIGLGYSIAIALAFLVLLSALLLAFYVCCRASRSRHLRRPPPPSSRSDA
Sbjct: 1   MSSPSSTYSFSRIGLGYSIAIALAFLVLLSALLLAFYVCCRASRSRHLRRPPPPSSRSDA 60

Query: 61  GIILPQIIFVAEDDAAPDRDDDNGVVGLDQSVINSYPKFPFSRDKSMAGANCVCSICLCE 120
           GIILPQIIFVAEDDAAPDRDDDNGVVGLDQ+VINSYPKFPFSRDKSMAGANCVCSICLCE
Sbjct: 61  GIILPQIIFVAEDDAAPDRDDDNGVVGLDQTVINSYPKFPFSRDKSMAGANCVCSICLCE 120

Query: 121 YKDAEMLRMMPECRHYFHLCCIDAWLKLNGSCPVCRNSPLPTPLSTPLQEWRITDDIMIW 180
           YKDAEMLRMMPECRHYFHLCCIDAWLKLNGSCPVCRNSPLPTPLSTPLQEWRITD+IMIW
Sbjct: 121 YKDAEMLRMMPECRHYFHLCCIDAWLKLNGSCPVCRNSPLPTPLSTPLQEWRITDEIMIW 180

Query: 181 IGILVTFPEFNHEPIDFTAFSLQISD 206
           IGILVTFPEFNHE IDFTAFSLQIS+
Sbjct: 181 IGILVTFPEFNHESIDFTAFSLQISE 206

[Close]

BLAST of Chy6G106690 vs. NCBI nr
Match: XP_004133841.1 (RING-H2 finger protein ATL67 [Cucumis sativus])

HSP 1 Score: 348 bits (893), Expect = 3.71e-120
Identity = 169/170 (99.41%), Postives = 170/170 (100.00%), Query Frame = 0


Query: 1   MSSPSSTYSFSRIGLGYSIAIALAFLVLLSALLLAFYVCCRASRSRHLRRPPPPSSRSDA 60
           MSSPSSTYSFSRIGLGYSIAIALAFLVLLSALLLAFYVCCRASRSRHLRRPPPPSSRSDA
Sbjct: 1   MSSPSSTYSFSRIGLGYSIAIALAFLVLLSALLLAFYVCCRASRSRHLRRPPPPSSRSDA 60

Query: 61  GIILPQIIFVAEDDAAPDRDDDNGVVGLDQSVINSYPKFPFSRDKSMAGANCVCSICLCE 120
           GIILPQIIFVAEDDAAPDRDDDNGVVGLDQ+VINSYPKFPFSRDKSMAGANCVCSICLCE
Sbjct: 61  GIILPQIIFVAEDDAAPDRDDDNGVVGLDQTVINSYPKFPFSRDKSMAGANCVCSICLCE 120

Query: 121 YKDAEMLRMMPECRHYFHLCCIDAWLKLNGSCPVCRNSPLPTPLSTPLQE 170
           YKDAEMLRMMPECRHYFHLCCIDAWLKLNGSCPVCRNSPLPTPLSTPLQE
Sbjct: 121 YKDAEMLRMMPECRHYFHLCCIDAWLKLNGSCPVCRNSPLPTPLSTPLQE 170

[Close]

BLAST of Chy6G106690 vs. NCBI nr
Match: XP_008437981.1 (PREDICTED: RING-H2 finger protein ATL67 [Cucumis melo])

HSP 1 Score: 344 bits (883), Expect = 1.24e-118
Identity = 167/170 (98.24%), Postives = 168/170 (98.82%), Query Frame = 0


Query: 1   MSSPSSTYSFSRIGLGYSIAIALAFLVLLSALLLAFYVCCRASRSRHLRRPPPPSSRSDA 60
           MSSPSSTYSFSRIGLGYSIAIALAFLVLLSALLLAFYVCCRASRSRHLRRPPPP SRS+ 
Sbjct: 1   MSSPSSTYSFSRIGLGYSIAIALAFLVLLSALLLAFYVCCRASRSRHLRRPPPPPSRSET 60

Query: 61  GIILPQIIFVAEDDAAPDRDDDNGVVGLDQSVINSYPKFPFSRDKSMAGANCVCSICLCE 120
           GIILPQIIFVAEDDAAPDRDDDNGVVGLDQSVINSYPKFPFSRDKSMAGANCVCSICLCE
Sbjct: 61  GIILPQIIFVAEDDAAPDRDDDNGVVGLDQSVINSYPKFPFSRDKSMAGANCVCSICLCE 120

Query: 121 YKDAEMLRMMPECRHYFHLCCIDAWLKLNGSCPVCRNSPLPTPLSTPLQE 170
           YKDAEMLRMMPECRHYFHLCCIDAWLKLNGSCPVCRNSPLPTPLSTPLQE
Sbjct: 121 YKDAEMLRMMPECRHYFHLCCIDAWLKLNGSCPVCRNSPLPTPLSTPLQE 170

[Close]

BLAST of Chy6G106690 vs. NCBI nr
Match: XP_038877453.1 (RING-H2 finger protein ATL67 [Benincasa hispida])

HSP 1 Score: 336 bits (861), Expect = 2.80e-115
Identity = 164/170 (96.47%), Postives = 166/170 (97.65%), Query Frame = 0


Query: 1   MSSPSSTYSFSRIGLGYSIAIALAFLVLLSALLLAFYVCCRASRSRHLRRPPPPSSRSDA 60
           MSSPSS YSFSRIGLGYSIAIALAFLVLLSALLLAFYVCCRASRSR+LRRPPP S+  DA
Sbjct: 1   MSSPSSNYSFSRIGLGYSIAIALAFLVLLSALLLAFYVCCRASRSRNLRRPPPSSAPPDA 60

Query: 61  GIILPQIIFVAEDDAAPDRDDDNGVVGLDQSVINSYPKFPFSRDKSMAGANCVCSICLCE 120
           GIILPQIIFVAEDDAAPDRDDDNGVVGLDQSVINSYPKFPFSRDKSMAGANCVCSICLCE
Sbjct: 61  GIILPQIIFVAEDDAAPDRDDDNGVVGLDQSVINSYPKFPFSRDKSMAGANCVCSICLCE 120

Query: 121 YKDAEMLRMMPECRHYFHLCCIDAWLKLNGSCPVCRNSPLPTPLSTPLQE 170
           YKDAEMLRMMPECRHYFHLCCIDAWLKLNGSCPVCRNSPLPTPLSTPLQE
Sbjct: 121 YKDAEMLRMMPECRHYFHLCCIDAWLKLNGSCPVCRNSPLPTPLSTPLQE 170

[Close]

BLAST of Chy6G106690 vs. NCBI nr
Match: XP_022933391.1 (RING-H2 finger protein ATL67-like [Cucurbita moschata])

HSP 1 Score: 313 bits (802), Expect = 3.37e-106
Identity = 154/170 (90.59%), Postives = 162/170 (95.29%), Query Frame = 0


Query: 5   SSTYSFSRIGLGYSIAIALAFLVLLSALLLAFYVCCRASRSRHLR----RPPPPSSRSDA 64
           SS YSF+++GLGY+IAIALAFLVLLSALLLAFYVCCRASRSR+LR    RPPP  SRSDA
Sbjct: 9   SSNYSFAKLGLGYAIAIALAFLVLLSALLLAFYVCCRASRSRNLRLSSSRPPP--SRSDA 68

Query: 65  GIILPQIIFVAEDDAAPDRDDDNGVVGLDQSVINSYPKFPFSRDKSMAGANCVCSICLCE 124
           GIILPQIIFVAEDD APDRDDDNGVVGLDQ+VINSYPKFPFS+DKSMAGANCVCSICLCE
Sbjct: 69  GIILPQIIFVAEDDGAPDRDDDNGVVGLDQAVINSYPKFPFSKDKSMAGANCVCSICLCE 128

Query: 125 YKDAEMLRMMPECRHYFHLCCIDAWLKLNGSCPVCRNSPLPTPLSTPLQE 170
           YK+AEMLRMMPECRHYFHLCCIDAWLKLNGSCPVCRNSPLPTPLSTPLQE
Sbjct: 129 YKEAEMLRMMPECRHYFHLCCIDAWLKLNGSCPVCRNSPLPTPLSTPLQE 176

[Close]

BLAST of Chy6G106690 vs. TAIR 10
Match: AT2G46160.1 (RING/U-box superfamily protein )

HSP 1 Score: 210.3 bits (534), Expect = 1.5e-54
Identity = 110/165 (66.67%), Postives = 125/165 (75.76%), Query Frame = 0


Query: 13  IGLGYSIAIALAFLVLLSALLLAFYVCCRASRSRHLRRPPPPSSRSDAG--IILPQIIFV 72
           +G GYSIAIAL FLVLLS +LL+ Y+CCR SR    RR     S  D G  +ILP+IIFV
Sbjct: 33  LGFGYSIAIALGFLVLLSTVLLSSYICCRDSR----RRTTAVESTGDRGGSVILPRIIFV 92

Query: 73  AEDDAAPDRDDDNGVVGLDQSVINSYPKFPFSRDKSMA-------GANCVCSICLCEYKD 132
           AE+D   D +  + VVGLDQ+VINSYPKF FS+D S A       G +  CSICLCEYK+
Sbjct: 93  AEED-NEDLEAGDVVVGLDQAVINSYPKFHFSKDTSAASSDGFGGGGDTTCSICLCEYKE 152

Query: 133 AEMLRMMPECRHYFHLCCIDAWLKLNGSCPVCRNSPLPTPLSTPL 169
           AEMLRMMPEC+HYFHLCC+DAWLKLNGSCPVCRNSPLPTP STPL
Sbjct: 153 AEMLRMMPECKHYFHLCCLDAWLKLNGSCPVCRNSPLPTPTSTPL 192

[Close]

BLAST of Chy6G106690 vs. TAIR 10
Match: AT3G61550.1 (RING/U-box superfamily protein )

HSP 1 Score: 196.8 bits (499), Expect = 1.7e-50
Identity = 106/178 (59.55%), Postives = 125/178 (70.22%), Query Frame = 0


Query: 4   PSSTYSFSRIGLGYSIAIALAFLVLLSALLLAFYVCCRASR---SRHLRRPPPPSSRSDA 63
           P  TY  + +GLGYSIAIAL FLVL+S ++L+ Y+CCRASR   S         +S SD 
Sbjct: 16  PIPTY-ITSLGLGYSIAIALGFLVLISTIILSSYICCRASRLRFSASAANANANASFSDR 75

Query: 64  GIILPQIIFVAEDDAAPDRDDDNGVV-GLDQSVINSYPKFPFSRDKSMA----------G 123
           G+I+P+IIFVAEDD   D +  N VV GLD SVINSYPKF F++D +            G
Sbjct: 76  GVIVPRIIFVAEDD---DLESGNVVVGGLDHSVINSYPKFHFTKDITAVVNGDGFHDGEG 135

Query: 124 ANCVCSICLCEYKDAEMLRMMPECRHYFHLCCIDAWLKLNGSCPVCRNSPLPTPLSTP 168
               CSICLCEY + EMLRMMPEC+HYFH+ C+DAWLKLNGSCPVCRNSPLPTP STP
Sbjct: 136 RETTCSICLCEYMEEEMLRMMPECKHYFHVYCLDAWLKLNGSCPVCRNSPLPTPQSTP 189

[Close]

BLAST of Chy6G106690 vs. TAIR 10
Match: AT2G35910.1 (RING/U-box superfamily protein )

HSP 1 Score: 119.0 bits (297), Expect = 4.5e-27
Identity = 66/157 (42.04%), Postives = 85/157 (54.14%), Query Frame = 0


Query: 14  GLGYSIAIALAFLVLLSALLLAFYVCCRASRSRHLRRPPPPSSRSDAGIILPQIIFVAED 73
           G  Y I +++  L+L++ + L  Y C R   S       P  +  D+  I      V  D
Sbjct: 63  GFRYGIGVSIGVLLLITTITLTSYYCTRNQLS-----SSPSQTNQDSTRIHHHHHHVIID 122

Query: 74  DAAPDRDDDNGVVGLDQSVINSYPKFPFSRDKSMAGANCVCSICLCEYKDAEMLRMMPEC 133
                      V GLD+  I SYPK  +S  K    A+C C+ICL +YK   +LR +P+C
Sbjct: 123 ----------VVPGLDEDTIQSYPKILYSEAKGPTTASC-CAICLGDYKGKHLLRQLPDC 182

Query: 134 RHYFHLCCIDAWLKLNGSCPVCRNSPLPTPLSTPLQE 171
            H FHL CID WL+LN +CPVCR SPLPTPLSTPL E
Sbjct: 183 NHLFHLKCIDTWLRLNPTCPVCRTSPLPTPLSTPLAE 203

[Close]

BLAST of Chy6G106690 vs. TAIR 10
Match: AT5G07040.1 (RING/U-box superfamily protein )

HSP 1 Score: 115.5 bits (288), Expect = 4.9e-26
Identity = 64/161 (39.75%), Postives = 93/161 (57.76%), Query Frame = 0


Query: 11  SRIGLGYSIAIALAFLVLLSALLLAFYVCCRASRSRHLRRPPPPSSRSDAGIILPQIIFV 70
           S +GLGY IAIA++ LVL+S ++LA Y+C R+  +          + SD  + LP     
Sbjct: 9   SGVGLGYGIAIAVSILVLISFIMLASYICIRSKSTGR------DEATSDVVLDLP----- 68

Query: 71  AEDDAAPDRDDDNGVVGLDQSVINSYPKFPFSRDKSMAGA-NCVCSICLCEYKDAEMLRM 130
               AA  +      +GLD+ VI SYP+      + +    N  CSICLC+Y+  E +R 
Sbjct: 69  --SPAAEVK------LGLDRPVIESYPRIVLGDSRRLPRPNNGPCSICLCDYEAREPVRC 128

Query: 131 MPECRHYFHLCCIDAWLKLNGSCPVCRNSPLPTPLSTPLQE 171
           +PEC H FH  C+D WL+ + +CP+CRNSP P+ L+TPL +
Sbjct: 129 IPECNHCFHTDCVDEWLRTSATCPLCRNSPAPSRLATPLSD 150

[Close]

BLAST of Chy6G106690 vs. TAIR 10
Match: AT5G06490.1 (RING/U-box superfamily protein )

HSP 1 Score: 109.8 bits (273), Expect = 2.7e-24
Identity = 62/167 (37.13%), Postives = 92/167 (55.09%), Query Frame = 0


Query: 14  GLGYSIAIALAFLVLLSALLLAFYVCCRASRSRHLRRPPPP--SSRSDAGIILP-QIIFV 73
           GL Y I +++  L+L++ + L  Y C R+  S      P      R   G + P Q  F 
Sbjct: 22  GLAYGIGVSIGILMLITTITLTSYYCTRSHISASPTTTPRTRRRQRESNGTLPPGQERFD 81

Query: 74  AEDDAAPDRDDDNGVVGLDQSVINSYPKFP-------FSRDKSMAGANCVCSICLCEYKD 133
            EDD +     +  V+GL + VI  +PK P       +S  K  +  +C CSICL +YK 
Sbjct: 82  FEDDESDTVVVE--VLGLTEEVIKGFPKLPYEEARVSYSLQKESSTTSC-CSICLADYKK 141

Query: 134 AEMLRMMPECRHYFHLCCIDAWLKLNGSCPVCRNSPLPTPLSTPLQE 171
            +M+R++P+C H FH  C+D WL+L+ +CPVCR SPLP+P  TP+ +
Sbjct: 142 MDMIRVLPDCNHLFHDNCVDPWLRLHPTCPVCRTSPLPSPAMTPVAD 185

The following BLAST results are available for this feature:

BLAST of Chy6G106690 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O82353	2.1e-53	66.67	RING-H2 finger protein ATL67 OS=Arabidopsis thaliana OX=3702 GN=ATL67 PE=2 SV=1	[more]
Q9M313	2.4e-49	59.55	RING-H2 finger protein ATL68 OS=Arabidopsis thaliana OX=3702 GN=ATL68 PE=2 SV=1	[more]
Q8RX29	6.3e-26	42.04	RING-H2 finger protein ATL70 OS=Arabidopsis thaliana OX=3702 GN=ATL70 PE=2 SV=1	[more]
Q9FL42	7.0e-25	39.75	Putative RING-H2 finger protein ATL69 OS=Arabidopsis thaliana OX=3702 GN=ATL69 P...	[more]
Q9FG21	3.8e-23	37.13	Putative RING-H2 finger protein ATL71 OS=Arabidopsis thaliana OX=3702 GN=ATL71 P...	[more]

BLAST of Chy6G106690 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L7B6	8.1e-93	99.41	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G121045 P...	[more]
A0A1S3AVV0	1.2e-91	98.24	RING-H2 finger protein ATL67 OS=Cucumis melo OX=3656 GN=LOC103483238 PE=4 SV=1	[more]
A0A6J1EYX3	3.8e-82	89.02	RING-H2 finger protein ATL67-like OS=Cucurbita moschata OX=3662 GN=LOC111440819 ...	[more]
A0A6J1IH02	1.1e-81	88.44	RING-H2 finger protein ATL67-like OS=Cucurbita maxima OX=3661 GN=LOC111473352 PE...	[more]
A0A6J1IAW3	1.1e-81	88.44	RING-H2 finger protein ATL67-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC1...	[more]

BLAST of Chy6G106690 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN56511.2	1.77e-148	98.06	hypothetical protein Csa_011308 [Cucumis sativus]	[more]
XP_004133841.1	3.71e-120	99.41	RING-H2 finger protein ATL67 [Cucumis sativus]	[more]
XP_008437981.1	1.24e-118	98.24	PREDICTED: RING-H2 finger protein ATL67 [Cucumis melo]	[more]
XP_038877453.1	2.80e-115	96.47	RING-H2 finger protein ATL67 [Benincasa hispida]	[more]
XP_022933391.1	3.37e-106	90.59	RING-H2 finger protein ATL67-like [Cucurbita moschata]	[more]

BLAST of Chy6G106690 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G46160.1	1.5e-54	66.67	RING/U-box superfamily protein	[more]
AT3G61550.1	1.7e-50	59.55	RING/U-box superfamily protein	[more]
AT2G35910.1	4.5e-27	42.04	RING/U-box superfamily protein	[more]
AT5G07040.1	4.9e-26	39.75	RING/U-box superfamily protein	[more]
AT5G06490.1	2.7e-24	37.13	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 114..155 e-value: 1.7E-5 score: 34.3
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 114..156 e-value: 8.0E-10 score: 38.9
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 114..156 score: 12.179465
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 75..160 e-value: 3.1E-21 score: 76.8
IPR044289	RING-H2 finger protein ATL67/ATL68/ATL70	PANTHER	PTHR46592	RING-H2 FINGER PROTEIN ATL67	coord: 7..170
None	No IPR available	PANTHER	PTHR46592:SF6	RING-H2 FINGER PROTEIN ATL67	coord: 7..170
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 113..161

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy6G106690.1	Chy6G106690.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0016740	transferase activity