Chy6G106670 (gene) Cucumber (hystrix) v1

Overview


Name	Chy6G106670
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	U11/U12 small nuclear ribonucleoprotein 59 kDa protein isoform X1
Location	chrH06: 894945 .. 903201 (+)
RNA-Seq Expression	Chy6G106670
Synteny	Chy6G106670

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATGACCCCCGACCTCTAGCAGTTGAAAGCTTTTCTAACAGTTGGCTTTTGAATGTGAAGCAGTCCTATGATGCCACATCCAAAGTGATGGATTATCAGATTGTTAAGCCTTCAAGGTTACTGGATGAAACCCAAAGCTTCAAATTCAACACTTCAATCCATCCATCCGTTCTTTTATCCCATGCCGATGAACTTTTTTTTGATGGCTCTGTCAGACCAGTTAATATAAACCACATAACAGGAGCCTCCAATACATCTGATTTTGTTCCAGTTGAGCTCAATTCTTCACTCTCTTCTTTAACTTCTAGTCCAGCCATAGAAAACAGATGTCATTCTGGAAGATGGAGAAAAACATTATGTATGCTACAGAAGTCTTTAGGATGTCTCAGTCCCATATGCCATAAAGTAGACCCAGCTGAAGTTAACTGGGATGATGACATTAAACAAAAATCCTGTGATGTTAGGAGTCAACGCCAATCCCCACGAGTATCTCCACAAAGCAACATTGGCCCCTCATCAGGTGATTGGTGCCATCTAGAGAACTCAATTTATGAAGCAATACTTCACTGCAAAAAATCAATAGGTTTGTTGCATGTTTCCTTGTTTTATGGTTAATTAATCTCCATTTGTTCACCACATAGTATTCTCATTATCTTCTTGATTTAGGGAATGATATCTCGGACCAAAATTAAAGGGCGATGGATTGATGAAGTACCAGACTTCTGGAATGGTTCCAGCATGGCAACGTGTTCTTTGTCTTCTTTTTCTCTGGCAGTATGCCTTTTCACTTCATTTTCTAAGGAGAAGTTATATTTTGTCAGTCCTTTGAGAATGAACGACATGTATAGGATCTCAGATGTGTTTCTAAGGGAAGTATCTCATGCATCCTTGAGAGTGATGTAACTATGATGCTACCTTGTCTTGTTTGATATGCTGTGTACCGTAGAGTGAGAGAAACAAGTTATTGTTCAAGAAAAACAGGGCGTCTGTTTTATACGGAATAGGAATGCTCGTTTCTATTCAATGTTGTGCGTTTTCAGATATACACATTCAAGTTTCCTGACGGCTATGGAAAATTCTATATTTACTTTGGACTTACTTTTTCGCATATTCATACCAACTCTTCCATCTTTATAAAATGGAAGTTTGTGAGGTGCTCAATTGCATGTTTTACATGGCTAATTTCTGTCGTAGGAAGTTTCTATCTCAATTTCTATCCCTGGAATGCAGTCAGAAAACTACCATTTCTGTCTCTGGAGAGAGAGAGACAGAGACAGAGACGAAGTGAGAGTTATGTTAAGCTGGTTGCAAGTGACCAAGGACAGGACATGGACAAAATATGTTAGGAGAAAGGCCACGAAGTTCAACCTCACCCCTTCATTGCTTTCACACCCTTTTGTTGTTTTCCTTTTTGTTCAATCTATCCTTGATCTTTGCGGTGGAGTCCCCGCCCATACACATTACGCACACACACACACAAAGAGAGAGAACAAAAAAGAAAACAAAGAAAATAATGCATGTCACCCTAACCCTTCCTTGTATTTCAAACACAATCCAAATATTTGAATCCTTACTGAGGGGACCAACCAAAGTCTTATCTTCACTGCTGGTTATGACCTTTGCCCATGGCCAGGGGTCACATGAATATGACACCGTCAAAATTCATCTCGCCTTAATCTTGAATTTTGGTAGCGTTTGTTTATATCATATTTTGTTATGGTAACGATGGATGGATAAAGAAAATAGAACCTTTTATCCACTATGCTTCCAAATATTCTTGTGCAAACATAGGCTAATACTGCACTGTAACAAAACCTTGTTTGGGGGATGTCCATTGATGGAACTCATTGCAAAATAGGCAGAAACTATTAGACCTAGTAATTCAAGCTTATGACCACAAAACACTGACTATGAAATTAGATTAGATTTAATGAGAAAGAATGTCAGTTAGAAGGATGCATACCAAAAAGAGAAAATTATATGTGTGTTTAATTATGAAGTTGCTTCGTGGAGTTTCAATTTCTTTCTATGGATAGACTACATACCTGTGAATCAATACATTGTTGTTAGGACCAACAACTTTAGTTGGTAATTGAGCAGAGAGAGGAAAAAAGGTTGGGAAAAGGTCATTCAAAGAGTTAGAATTGTGATGAAGCTTTCCCTGTAAAGAGTGAAAGAACACCCTCCCTAGTAGAAAATTATCTCCTTGTAAAATGACATAGTTTCCCTGAGTGTTTGTAACAAAGATAAACAAGTCGCAGTGATTCGTAGTCCTAAGCCTATTCCAGCTCAAATGTCCATATCTTGAGTCTTTCAAAATCTATCGTACCTAAGGTGTACCTAAAGTGAAAAAAGATGATTTCTTTGGTCTAGATATCTCTTTTTCCTCATCGACTCGAAAGGTGTCCCTCCAAAATAAACTTCTGATTCAACTTATTCACAAATATTGAGTTCAAGTTATTGTTTACATAGATCAGGTGGATGTTGGGAGAGAGAATTTCACTACTTGTGCTAGTTTCATAATTGGATTTTCCCTTAAGCTTTTAGACTAAAGCATATCATCCACTCTATTTAAAGAAATTGGCACATCCTCTCTTCAAAACTTATTTCAAGAAGATAAAAGAGGAGGAAACAAGGAGAGAACCCCACCAGAATCGACCATCATAGATGTCTATAATCACGAAAAGCGCGTAACTTACCAATACGAAACATCTCTATTTGATGCAAAATTACAAAATATGAAGCTACGAGTCCTACAAAACCCAAAAACAAAAAAACAAAAAGAAGAAGAAGAATAATTCCCCACCACACAAGCCTTTTGGGCCAGCAGGGGGACCAAAGACATTGATATGGGAGGCATGTCCCATATGTCAGGCAATGAGTAGCTGTTGTTGCCAATGACGCGGCGGCAAATGCCTAAGATTTCACTCTGTTCAGACTCCCAAATGCCATTTTTAGGAGTTGGATTCTTTGTTTCTATGAGATATTGAACTCTAGAGTTTATGAGTCTTCAGAAGCTGCCAAAGCCAAAAGAGGTTGGGTTGGCGTTTTGGTATGCCATTCTAACTTTCATATTTTTCTTTTGACGAATCGTTGCACATGGAGTTTTTAGTTGGAATCGTAATTGGGGACCAAAGTTCTAATATTTGTCTTTGGTTTATCAAGATCAGATCATACTGAGTTACTTTGTCTGCCTTCTGATTATGATTGAAATCAAATGGTCTATATAGTTTGTCCCACAAGTTGAAATTGGAATTGAAGAGATTTCAAACCTGTGACATATATCCAAGTTCAATGAAAAAGCCAGGTTAATTCATTAATTTTTAGGGAATCTACGATTTAAGGGCCTAGCCAATGACTCCTCATTATTCTCTTAGTATGCTAATCTAAACACAATATAAGTAAACTAAATTTCAATTTCACTGAAAATTCATCCAAACCAAATCCGATTTTTGTTTAATAAGATTATTTTATTCAGACAACATTTAATTAGATTTGTGTTTATATATATACATATATATATAAACAACAACAATTTTGTAAAATTACTGTGTCATATTCTCTTACTTCTCTTACTGGTCTTTATAAACACCAATGAATCTCACGTTACTATGAGTAAATTCTGCTTTATGTACAAGAATATACTAGTTGCAAATATAACAATTAGATTTAATATAATTAAGTATGTAGCACAAATTTTTAAAAATTACAAATATAGTAAAATTTATAATCTATAAAGAGTTTATCACCAATAGATTATGTTGCAAATATTGATCTATGATCGATAAATCATAAAAGTCTATCAATGATAAAATTCTATCACTATATACTTTGCTATATATTTAAAAAAATTTAAAGGGTAATTATAATTGATGGTCATTTGAGGAATAATAATTAAGATATAGCAACATTTAAAAAAAATTACAAATATAGCAAAACTATCGTGGATAAACTTGTATTGTTGATAGATTCGTACGATCTATACCAATATTTACAGTATGTCTATCGGTCATAGGCTTCTATCGTTAATAAAATTTGACAGATTTTTACTATATTTGCAAATTTTTTAAAATATTACTACATACTTAAATCCCAATTATTATAAACTATTTTGAAATGAAAACCCAAGCCCATAAAAGAATAAAGCCCAACTATATGGATCGTCTCGTCATTTTGTTAGCCCAATTTGTTTAGATAGATTAATCATTCTAATTTAATTTCTGACCATTATCAATTTGTTCGTACAAATTTATTTACATAAAAATTCGAAGTTCATATTTTCGAGCTGAATACTGAAGCTTCGCAATTTACAGAGAAAATTCGGAAGAGTTTCGTTTTGGCGCATCTCCTTCCTTCTTCGCATCAGTTATCCTAATCTACTTGACATTTTTTCTTCTTAATCTATTTGGTTTTCATCGATTGTTGCTCTCAGTAGCAATGAATCCAGTTCCGCATCAGTTTACACCTCAACGTCCGTGGTTCCCGGTGCCGCCACCGAATCCGCCGCCGTCTTCTTCTTCTTCTTCTTCTTCATTTTTCTGGGACAACCTCAATGTGCGTGATCGTTTAAGGGAATTGCAAGACACTCTCAATCTCGCCAAGTCAATGTATGTGTGTTCGTAATTTTTTTTTCTTAGACATTATTTGTTTGTTCGTAATTTGCTTACTACGTCTCAGTTCAATTACTTCTTGTCCTAAATTGTGGTTGAATTTTAAATATTGATAGGCAGAAAGAGCTGGAAATGTTGATGTTGGTTAAAGAGGCCAAATTATCCGAGCAGAGTGCTGATAGTCTGCCTAATGGTTCTTCTATTGGTGAATTTTGTGATTACTTGGAAGATAGAAGGATTAGTTTGGAGTTGCAAGAATCGCGTTCGGTTGAAGCTGCAGCTGGTTTGATGGAAAAGTTGAGAGCTCAGCTTCATCCATTTAGGCTTGATACTGATGAATCGAGTCTCTGGGAAGCAGTTAGGTTATCTGGTAAATTATCAAAGGCCAAGAGAAATAAGCAATGGAGAAAGAGAAAGAGGAAGCGCATTGCTGAATCACTTGCAAAGGTTGCCTTTATTTATTTCCCAAATTATCTAACATATTTACTGTAATCTTACTTCTTATTTTTTCCCCCTTTTATTCTGAAATCTCAGGAACGAGAAAGTTTTGATCAAGTTGATCTGGAGGCTGATGAATGGAGGGCCAGGGAGATTGCCAAGGATATTGCAAAACGCAAGGTGCTAAAGTATCAACTGATTTTTTTTTTTTTCTTTCTATTCTCCCACTGGTAGCTGAGAATTTAAAGTCCTTTTTTGGCTTCTCTTTTAGGTTGGATAAGCGAGTTCTATTGTAATCTGATCTTTATTCTAGACATATAAAAATATTTAGGGAGTTATTTATTCGTTTATATTTTAGTAAGAAACTAGGTGTTGAGGAGATAAATAGTTATAAGCAATAGGGCCATTGGAAGATGGTTTTCTATTTCAAATTCAGAACCAGTAACCAAATTTGTGGTCGTGCCTGAATTTCATGGACGTAGGGTCGTGTCCCAAGAACATCAAAGTACAGTACAGGATGGGGTTTATAGAAATATATTGATAAAAATATTGAAACTCTGCTTTTAACTGCTGCCAGCTCTCACGTTCATATAAATTCTATTGTTTCCTCATCTCATGAACGGGTTATTTACCTCCAATAAAAAAAAATATGTAGACAGCTCTTTACATTTTCACAGTTTTTTTCTAGACAAATAAAATCTTCCCCCACCCAATGTGTTGTACTTGATTACTATCGTGCTTTTGCTTGTCTAGCTCTGAAATATGGAACATCGGCACCATGTATTTACAGAATGATGTTAATTGTTGATGAGCAAAAAATTTCAGGTGGAGAAGATGAACGAAATTGCAAGAATTAAAGCAAAAGAGGAGAAAAAGAAGCTAGATTCTGAGGTGAGAATCAATCAAACTGTAGTATTAAAACTATTCTCAGCAGTTTTTTTCCCTCTTCTTATGAACTTCTAGCTAATGTTGGATATCATGTAGCTTGAACTGGCACTAATAGTGGAAAAGTTGCAAGAATTACGCTCCATCAGGATCCAAAAATTGAAGAAACAAGGTTCAATTTCTTACTTCTTCATTTATAACTGTATCGTTATCCTTCATAACATGCAAGTGGTTTGTTTTGCTGGTTTAGCAGATTTGTTACATTCGTTTTGGTCTTTGGCACTTTGTTAGGTGTAGGATAGAAGACAAATTCTAAATTGTTTTTAATTTTAATGGTTCCCAAGAGATTTTTCATGGTTCTATCAGAGTCATTGTAGAATCATGAAACCTTGAGAAACTTAGGAACATTTACGGAAGCTTACAACTGGGGATACAAAAGCAATTGGTTTAGGCTAGCGGAATTTAGTATGTGGTTTTTTTCTTCCGCTGTCTGCTGAGGTGGTTATTGAAGGCTTAAAAATTTGGGGAAAATTTGACATTTTCTATAGGATAAAAATAATGTTGTGTACCAGAAGTTACAGGGTTGAAAAGGGTATGTCTTATTTTCATGGATTGTATTATTTAATTATTGGGTAAGTCAAGATTTTGAGGTTTAGTTTGGTCCTTGGAACTATTTTCTTTCTGACTTTACTATGTGAATGAATTTCTTTTTTTTCTCTATTTAAAAGGAAAAAATGATCGCTGTTGTGAGTTCTTATTACTTTCTCTATCATTAAATTGCCCTCTCTATGTATAAATGCATGTATTATGAAAAGTAGTATGCTGTCTCCGCTTCAAAAAAAATATGAAAAGTAGTATGTTGCTGTCTCTATATGCAATGGTACTTTTGAATCCTGTGTTTGAGCCAAGAAATTTTGACGCTTGGATCTGGTTATATCCTAATGATAGTAGTAGTTGGTAATCTATTTGTCCAGGTCATTTTCTACCTGAGGAGGATGATAAGTTTCTAGAGAAGGTTCGAGCTGCAGTTGAGGAAGAGGAACGTCAAGCCCTTGCTACAGCTGATACGGATGCTGCCAAGGATGCCATTGCTACTGCAGAGGTCTCTAGGAAAACTGTTCCAACTTACCCTGAATCAAGGGATCCAGATAGTGCTACAGATAGGTCTGAAGAAAGAAATGATCAAAGATCTGCGGGTGCAGATGATAAGGTCTCCAACACCAGCATTAATAAAGAGCCTGGGAAACAGTTTGGAGAAGTACAAGGTTACGGAAGAATGTATGATTATGCAGCCAACTTACCGATGGAATTCTATCATTATTATTATGGAAGTAACACCGATATGGGCACGTTAATTGAGGTAATTGCAATAATTGTTTCTGTGCTCTTCACTTATTGCAGAATTTTTGTGGCATAGTTTAGTGAAATTCATGCAGTTGGTGCATACTTTGATCTTTTATGTCCACCGTTGAGTTGAATTTGGAAGTCTCATTGTATCTTCTCTAGCATTTGTAGAAAAGCTAAGCATACTTTTATTAGCTTTTCTGAAAAAATTACAGTATAATATTGGATCACGAATTTGGGAAATCTAGATTATTTTTATTGTACAAAGTAGTGAGTCTTAGAAGTATGAATTGTTATAGCATGTAGTTTCGGTTTTGTATTTCTAAAGGATAGCTTGAGGCCTGAGAGATTTGTGACTTGCGAGAGATGGTGAAAGCCTAGTGTAGCTTTGTTATTCCAATTTGTGGAATTAGGAAGATTGTAGTATGAGATAAGCAAATTTAAATTTTAACCGACTGCATGCTAAACGGTAAACAGACTTGCTTGAAGCTAACCCAAAAGTTCGAAACTCTTCCTTCTCTAGAAAAACAATACCCCCTTGGTTCATGACATACACATAACCCTAGCACGGTGCCGAACTAGTCAACTGTTTTTGTGATTCTGAAACATTCCCTTGCGTCAGTTTACTAAAAGAAACCAATAACACTCTTGATTTTTGAACCACAACTATTACCGTTTTGTGTGCAGGTAAGACGATCATGGGATGCATTTATAAGGCCAGGAGGAAGGTAAGATACGATTTCTTACTCACAAATACCTACAATAGCTTCTCAAGTGTGCTAGTTATATAATCCTCAACAGTTTCACAATTGTATATATTTAAATATTTGAATCCATTGATAGCCCAGAGAGGTGGGAGAGTTGTGCTAATCGAATGTTCCTACGAAATTATGTGCAGCCGAATACCAGGGCATTGGGTTGAACCACCACCACCCGCAGATGAAATATGGGCAGCATATTTGGTTCAACAAAAATGA

mRNA sequence

ATGGATGACCCCCGACCTCTAGCAGTTGAAAGCTTTTCTAACAGTTGGCTTTTGAATGTGAAGCAGTCCTATGATGCCACATCCAAAGTGATGGATTATCAGATTGTTAAGCCTTCAAGGTTACTGGATGAAACCCAAAGCTTCAAATTCAACACTTCAATCCATCCATCCGTTCTTTTATCCCATGCCGATGAACTTTTTTTTGATGGCTCTGTCAGACCAGTTAATATAAACCACATAACAGGAGCCTCCAATACATCTGATTTTGTTCCAGTTGAGCTCAATTCTTCACTCTCTTCTTTAACTTCTAGTCCAGCCATAGAAAACAGATGTCATTCTGGAAGATGGAGAAAAACATTATGTATGCTACAGAAGTCTTTAGGATGTCTCAGTCCCATATGCCATAAAGTAGACCCAGCTGAAGTTAACTGGGATGATGACATTAAACAAAAATCCTGTGATGTTAGGAGTCAACGCCAATCCCCACGAGTATCTCCACAAAGCAACATTGGCCCCTCATCAGGTGATTGGTGCCATCTAGAGAACTCAATTTATGAAGCAATACTTCACTGCAAAAAATCAATAGTAGCAATGAATCCAGTTCCGCATCAGTTTACACCTCAACGTCCGTGGTTCCCGGTGCCGCCACCGAATCCGCCGCCGTCTTCTTCTTCTTCTTCTTCTTCATTTTTCTGGGACAACCTCAATGTGCGTGATCGTTTAAGGGAATTGCAAGACACTCTCAATCTCGCCAAGTCAATGCAGAAAGAGCTGGAAATGTTGATGTTGGTTAAAGAGGCCAAATTATCCGAGCAGAGTGCTGATAGTCTGCCTAATGGTTCTTCTATTGGTGAATTTTGTGATTACTTGGAAGATAGAAGGATTAGTTTGGAGTTGCAAGAATCGCGTTCGGTTGAAGCTGCAGCTGGTTTGATGGAAAAGTTGAGAGCTCAGCTTCATCCATTTAGGCTTGATACTGATGAATCGAGTCTCTGGGAAGCAGTTAGGTTATCTGGTAAATTATCAAAGGCCAAGAGAAATAAGCAATGGAGAAAGAGAAAGAGGAAGCGCATTGCTGAATCACTTGCAAAGGAACGAGAAAGTTTTGATCAAGTTGATCTGGAGGCTGATGAATGGAGGGCCAGGGAGATTGCCAAGGATATTGCAAAACGCAAGGTGGAGAAGATGAACGAAATTGCAAGAATTAAAGCAAAAGAGGAGAAAAAGAAGCTAGATTCTGAGCTTGAACTGGCACTAATAGTGGAAAAGTTGCAAGAATTACGCTCCATCAGGATCCAAAAATTGAAGAAACAAGGTCATTTTCTACCTGAGGAGGATGATAAGTTTCTAGAGAAGGTTCGAGCTGCAGTTGAGGAAGAGGAACGTCAAGCCCTTGCTACAGCTGATACGGATGCTGCCAAGGATGCCATTGCTACTGCAGAGGTCTCTAGGAAAACTGTTCCAACTTACCCTGAATCAAGGGATCCAGATAGTGCTACAGATAGGTCTGAAGAAAGAAATGATCAAAGATCTGCGGGTGCAGATGATAAGGTCTCCAACACCAGCATTAATAAAGAGCCTGGGAAACAGTTTGGAGAAGTACAAGGTTACGGAAGAATGTATGATTATGCAGCCAACTTACCGATGGAATTCTATCATTATTATTATGGAAGTAACACCGATATGGGCACGTTAATTGAGGTAAGACGATCATGGGATGCATTTATAAGGCCAGGAGGAAGCCGAATACCAGGGCATTGGGTTGAACCACCACCACCCGCAGATGAAATATGGGCAGCATATTTGGTTCAACAAAAATGA

Coding sequence (CDS)

ATGGATGACCCCCGACCTCTAGCAGTTGAAAGCTTTTCTAACAGTTGGCTTTTGAATGTGAAGCAGTCCTATGATGCCACATCCAAAGTGATGGATTATCAGATTGTTAAGCCTTCAAGGTTACTGGATGAAACCCAAAGCTTCAAATTCAACACTTCAATCCATCCATCCGTTCTTTTATCCCATGCCGATGAACTTTTTTTTGATGGCTCTGTCAGACCAGTTAATATAAACCACATAACAGGAGCCTCCAATACATCTGATTTTGTTCCAGTTGAGCTCAATTCTTCACTCTCTTCTTTAACTTCTAGTCCAGCCATAGAAAACAGATGTCATTCTGGAAGATGGAGAAAAACATTATGTATGCTACAGAAGTCTTTAGGATGTCTCAGTCCCATATGCCATAAAGTAGACCCAGCTGAAGTTAACTGGGATGATGACATTAAACAAAAATCCTGTGATGTTAGGAGTCAACGCCAATCCCCACGAGTATCTCCACAAAGCAACATTGGCCCCTCATCAGGTGATTGGTGCCATCTAGAGAACTCAATTTATGAAGCAATACTTCACTGCAAAAAATCAATAGTAGCAATGAATCCAGTTCCGCATCAGTTTACACCTCAACGTCCGTGGTTCCCGGTGCCGCCACCGAATCCGCCGCCGTCTTCTTCTTCTTCTTCTTCTTCATTTTTCTGGGACAACCTCAATGTGCGTGATCGTTTAAGGGAATTGCAAGACACTCTCAATCTCGCCAAGTCAATGCAGAAAGAGCTGGAAATGTTGATGTTGGTTAAAGAGGCCAAATTATCCGAGCAGAGTGCTGATAGTCTGCCTAATGGTTCTTCTATTGGTGAATTTTGTGATTACTTGGAAGATAGAAGGATTAGTTTGGAGTTGCAAGAATCGCGTTCGGTTGAAGCTGCAGCTGGTTTGATGGAAAAGTTGAGAGCTCAGCTTCATCCATTTAGGCTTGATACTGATGAATCGAGTCTCTGGGAAGCAGTTAGGTTATCTGGTAAATTATCAAAGGCCAAGAGAAATAAGCAATGGAGAAAGAGAAAGAGGAAGCGCATTGCTGAATCACTTGCAAAGGAACGAGAAAGTTTTGATCAAGTTGATCTGGAGGCTGATGAATGGAGGGCCAGGGAGATTGCCAAGGATATTGCAAAACGCAAGGTGGAGAAGATGAACGAAATTGCAAGAATTAAAGCAAAAGAGGAGAAAAAGAAGCTAGATTCTGAGCTTGAACTGGCACTAATAGTGGAAAAGTTGCAAGAATTACGCTCCATCAGGATCCAAAAATTGAAGAAACAAGGTCATTTTCTACCTGAGGAGGATGATAAGTTTCTAGAGAAGGTTCGAGCTGCAGTTGAGGAAGAGGAACGTCAAGCCCTTGCTACAGCTGATACGGATGCTGCCAAGGATGCCATTGCTACTGCAGAGGTCTCTAGGAAAACTGTTCCAACTTACCCTGAATCAAGGGATCCAGATAGTGCTACAGATAGGTCTGAAGAAAGAAATGATCAAAGATCTGCGGGTGCAGATGATAAGGTCTCCAACACCAGCATTAATAAAGAGCCTGGGAAACAGTTTGGAGAAGTACAAGGTTACGGAAGAATGTATGATTATGCAGCCAACTTACCGATGGAATTCTATCATTATTATTATGGAAGTAACACCGATATGGGCACGTTAATTGAGGTAAGACGATCATGGGATGCATTTATAAGGCCAGGAGGAAGCCGAATACCAGGGCATTGGGTTGAACCACCACCACCCGCAGATGAAATATGGGCAGCATATTTGGTTCAACAAAAATGA

Protein sequence

MDDPRPLAVESFSNSWLLNVKQSYDATSKVMDYQIVKPSRLLDETQSFKFNTSIHPSVLLSHADELFFDGSVRPVNINHITGASNTSDFVPVELNSSLSSLTSSPAIENRCHSGRWRKTLCMLQKSLGCLSPICHKVDPAEVNWDDDIKQKSCDVRSQRQSPRVSPQSNIGPSSGDWCHLENSIYEAILHCKKSIVAMNPVPHQFTPQRPWFPVPPPNPPPSSSSSSSSFFWDNLNVRDRLRELQDTLNLAKSMQKELEMLMLVKEAKLSEQSADSLPNGSSIGEFCDYLEDRRISLELQESRSVEAAAGLMEKLRAQLHPFRLDTDESSLWEAVRLSGKLSKAKRNKQWRKRKRKRIAESLAKERESFDQVDLEADEWRAREIAKDIAKRKVEKMNEIARIKAKEEKKKLDSELELALIVEKLQELRSIRIQKLKKQGHFLPEEDDKFLEKVRAAVEEEERQALATADTDAAKDAIATAEVSRKTVPTYPESRDPDSATDRSEERNDQRSAGADDKVSNTSINKEPGKQFGEVQGYGRMYDYAANLPMEFYHYYYGSNTDMGTLIEVRRSWDAFIRPGGSRIPGHWVEPPPPADEIWAAYLVQQK*

Homology

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BLAST of Chy6G106670 vs. ExPASy Swiss-Prot
Match: Q8VYD3 (U11/U12 small nuclear ribonucleoprotein 59 kDa protein OS=Arabidopsis thaliana OX=3702 GN=SNRNP59 PE=2 SV=1)

HSP 1 Score: 337.0 bits (863), Expect = 4.3e-91
Identity = 204/409 (49.88%), Postives = 266/409 (65.04%), Query Frame = 0


Query: 202 PHQFTPQRP---WFPVPPPNPPPSSSSSSSSFFWDNLNVRDRLRELQDTLNLAKSMQKEL 261
           P  F P  P   W P+ PP+PP          FW+  N+ D+L++LQDTLNLAKSM+KEL
Sbjct: 3   PANFQPPNPPFHWAPMLPPDPP------RCGMFWNTKNITDQLKQLQDTLNLAKSMEKEL 62

Query: 262 EMLMLVKEAKLSEQSADSLPNGSSIGEFCDYLEDRRISLELQESRSVEAAAGLMEKLRAQ 321
           E L ++K+AK S ++A      S +    +YLE R++ L  QE  SV+AA  LM  LRAQ
Sbjct: 63  EALKMIKDAKGSVENA---VQDSGV----EYLEARKMDLGQQEMLSVDAANSLMSTLRAQ 122

Query: 322 LHPFRLDTDESSLWE----AVRLSGKLSKAKRNKQWRKRKRKRIAESLAKERESFDQVDL 381
           L PFR   DE+S WE    AVRL+ K+ K+ RNK W+KRKR+  AE  AKE E F+Q D 
Sbjct: 123 LEPFRFVVDENSPWEEKSAAVRLTCKMKKSIRNKLWKKRKRRCAAEMRAKEPERFEQADR 182

Query: 382 EADEWRAREIAKDIAKRKVEKMNEIARIKAKEEKKKLDSELELALIVEKLQELRSIRIQK 441
           EADEWR +E+AKD+A RKV++M  I +IKAK E+K+L+ ELELALIVE++QELRS+RI+K
Sbjct: 183 EADEWREKEMAKDMANRKVDEMKAIEKIKAKRERKRLEPELELALIVEEMQELRSLRIEK 242

Query: 442 LKKQGHFLPEEDDKFLEKVRAAVEEEERQALATADTDAAKDAIATAEVSRKTVPTYPESR 501
           LKKQGHFLPEEDDKF E VRAAVE+EE QA +  +T+  +  IA+ E +  T        
Sbjct: 243 LKKQGHFLPEEDDKFFESVRAAVEQEENQAQSLINTETEEHVIASEENTTLTT------- 302

Query: 502 DPDSATDRSEERNDQRSAGADDKVSNTSINKEPGKQFGEVQGYGRMYDYAANLPMEFYHY 561
              + T+   +++   +A + ++      N                 D  +NLP+E YHY
Sbjct: 303 --SNKTNNDTDKDSNTNAASCERTMKAPDNG---------------CDNISNLPVEVYHY 362

Query: 562 YYGSNTDMGTLIEVRRSWDAFIRPGGSRIPGHWVEPPPPADEIWAAYLV 604
           YYGSN DMG LIE+RR WDA++  GGSRIPGHWV+P PPA+EIWA+ LV
Sbjct: 363 YYGSNIDMGRLIEIRREWDAYLSAGGSRIPGHWVQPSPPANEIWASCLV 374

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BLAST of Chy6G106670 vs. ExPASy Swiss-Prot
Match: Q84JK8 (Probable membrane-associated kinase regulator 6 OS=Arabidopsis thaliana OX=3702 GN=MAKR6 PE=2 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 3.5e-08
Identity = 66/225 (29.33%), Postives = 97/225 (43.11%), Query Frame = 0


Query: 9   VESFSNSWLLNV----------KQSYDATSK-----VMDYQIVKPSRLLDET---QSFKF 68
           ++SFS SWL+N            Q+Y+ +S       MD ++    R   +T    SFKF
Sbjct: 15  IDSFSYSWLVNFPSLEATIDDHHQTYEDSSSSSSFIEMDPRLPPSRRFFIKTSHESSFKF 74

Query: 69  NTSIHPS---VLLSHADELFFDGSVRPVNINHITGASNTSDFVPVELNSS-------LSS 128
           +  +  S     L HADELF DG V P  +   T A+   +  P++  +S       L+S
Sbjct: 75  DNFVSFSDEDHSLVHADELFRDGYVMPYRLKP-TSAATEEESEPLDTTTSEKIDTRGLNS 134

Query: 129 LTSSPAIENRCHSGRWRKTLCMLQKSLGCLSPICHK-------VDPAEVNWDDDIK-QKS 188
             S  +        +W     +L K L  L+P+C +       V    +  D  I+   S
Sbjct: 135 KPSPTSSRKLRRVSKW-----VLLKYLDFLTPLCKRLRRCRSAVTTGSIGMDSRIRVTTS 194

Query: 189 CDVRSQRQSPRVSPQSNIGPSSGDW---CHLENSIYEAILHCKKS 195
           C  R        SP+ ++      W   C  E+SIYEA+LHCKKS
Sbjct: 195 CRSRVYSDEMTSSPRISVA-DDYYWRRSCDSESSIYEAVLHCKKS 232

[Close]

BLAST of Chy6G106670 vs. ExPASy TrEMBL
Match: A0A0A0L417 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G121010 PE=4 SV=1)

HSP 1 Score: 761.1 bits (1964), Expect = 3.4e-216
Identity = 400/409 (97.80%), Postives = 404/409 (98.78%), Query Frame = 0


Query: 198 MNPVPHQFTPQRPWFPVPPPNPPPSSSSSSSSFFWDNLNVRDRLRELQDTLNLAKSMQKE 257
           MNPVPHQFTPQRPWFPVPPPNPPP SSSSSSSFFWDNLNVRDRLRELQDTLNLAKSMQKE
Sbjct: 1   MNPVPHQFTPQRPWFPVPPPNPPP-SSSSSSSFFWDNLNVRDRLRELQDTLNLAKSMQKE 60

Query: 258 LEMLMLVKEAKLSEQSADSLPNGSSIGEFCDYLEDRRISLELQESRSVEAAAGLMEKLRA 317
           LEMLMLVKEAKLSEQS DSLPNGSSIGEFCDYLEDRRISLELQESRSVEAAAGLMEKLRA
Sbjct: 61  LEMLMLVKEAKLSEQSTDSLPNGSSIGEFCDYLEDRRISLELQESRSVEAAAGLMEKLRA 120

Query: 318 QLHPFRLDTDESSLWEAVRLSGKLSKAKRNKQWRKRKRKRIAESLAKERESFDQVDLEAD 377
           QLHPFRLDTDESSLWEAVRLSGKLSKAKRNKQWRKRKRKR+AESLAKERESFDQVDLEAD
Sbjct: 121 QLHPFRLDTDESSLWEAVRLSGKLSKAKRNKQWRKRKRKRVAESLAKERESFDQVDLEAD 180

Query: 378 EWRAREIAKDIAKRKVEKMNEIARIKAKEEKKKLDSELELALIVEKLQELRSIRIQKLKK 437
           EWRAREIAKDIAKRKVEKMNEIARIKAKEEKKKLDSELELALIVEKLQELRSIRIQKLKK
Sbjct: 181 EWRAREIAKDIAKRKVEKMNEIARIKAKEEKKKLDSELELALIVEKLQELRSIRIQKLKK 240

Query: 438 QGHFLPEEDDKFLEKVRAAVEEEERQALATADTDAAKDAIATAEVSRKTVPTYPESRDPD 497
           QGHFLPEEDDKFLEKVRAAVEEEERQALA ADTDAAKDAIATAEVSRKTVPTYPESRDPD
Sbjct: 241 QGHFLPEEDDKFLEKVRAAVEEEERQALAAADTDAAKDAIATAEVSRKTVPTYPESRDPD 300

Query: 498 SATDRSEERNDQRSAGADDKVSNTSINKEPGKQFGEVQGYGRMYDYAANLPMEFYHYYYG 557
           SATDRSEERNDQRSAGAD+KVSNTS NKEPGKQFGE+QGYGRMYDYAANLPMEFYHYYYG
Sbjct: 301 SATDRSEERNDQRSAGADEKVSNTSTNKEPGKQFGELQGYGRMYDYAANLPMEFYHYYYG 360

Query: 558 SNTDMGTLIEVRRSWDAFIRPGGSRIPGHWVEPPPPADEIWAAYLVQQK 607
           SNTDMGTLIEVRRSWDAFIRPGGSRIPGHWVEPPPP+DEIWAAYLV QK
Sbjct: 361 SNTDMGTLIEVRRSWDAFIRPGGSRIPGHWVEPPPPSDEIWAAYLVPQK 408

[Close]

BLAST of Chy6G106670 vs. ExPASy TrEMBL
Match: A0A5D3D0C0 (U11/U12 small nuclear ribonucleoprotein 59 kDa protein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G005040 PE=4 SV=1)

HSP 1 Score: 737.6 bits (1903), Expect = 4.0e-209
Identity = 391/409 (95.60%), Postives = 397/409 (97.07%), Query Frame = 0


Query: 198 MNPVPHQFTPQRPWFPVPPPNPPPSSSSSSSSFFWDNLNVRDRLRELQDTLNLAKSMQKE 257
           MN VPHQFTPQRPWFPVPPPNPP SSSSSS   FWDNLNVRDRLR+LQ+TL+LAKSMQKE
Sbjct: 1   MNSVPHQFTPQRPWFPVPPPNPPLSSSSSS---FWDNLNVRDRLRDLQETLDLAKSMQKE 60

Query: 258 LEMLMLVKEAKLSEQSADSLPNGSSIGEFCDYLEDRRISLELQESRSVEAAAGLMEKLRA 317
           LEMLML+KE KLSEQSADSLPNGSSIGEFCDYL+DRRISLELQESRSVEAAAGLMEKLRA
Sbjct: 61  LEMLMLIKEGKLSEQSADSLPNGSSIGEFCDYLKDRRISLELQESRSVEAAAGLMEKLRA 120

Query: 318 QLHPFRLDTDESSLWEAVRLSGKLSKAKRNKQWRKRKRKRIAESLAKERESFDQVDLEAD 377
           QL PFRLDTDESSLWEAVRLSGKLSKAKRNKQWRKRKRKRIAESLAKERESFDQVD+EAD
Sbjct: 121 QLQPFRLDTDESSLWEAVRLSGKLSKAKRNKQWRKRKRKRIAESLAKERESFDQVDMEAD 180

Query: 378 EWRAREIAKDIAKRKVEKMNEIARIKAKEEKKKLDSELELALIVEKLQELRSIRIQKLKK 437
           EWRAREIAKDIAKRKVEKM EIARIKAKEEKKKLDSELELALIVEKLQELRSIRIQKLKK
Sbjct: 181 EWRAREIAKDIAKRKVEKMKEIARIKAKEEKKKLDSELELALIVEKLQELRSIRIQKLKK 240

Query: 438 QGHFLPEEDDKFLEKVRAAVEEEERQALATADTDAAKDAIATAEVSRKTVPTYPESRDPD 497
           QGHFLPEEDDKFLEKVRAAVEEEERQALA ADTDAAKDAIATAEVSRKTVPTYPESRDPD
Sbjct: 241 QGHFLPEEDDKFLEKVRAAVEEEERQALAAADTDAAKDAIATAEVSRKTVPTYPESRDPD 300

Query: 498 SATDRSEERNDQRSAGADDKVSNTSINKEPGKQFGEVQGYGRMYDYAANLPMEFYHYYYG 557
           SATDRSEER DQRSAGADDKVSNTS NKEPGKQFGEVQGYGRMYDYAANLPMEFYHYYYG
Sbjct: 301 SATDRSEERIDQRSAGADDKVSNTSTNKEPGKQFGEVQGYGRMYDYAANLPMEFYHYYYG 360

Query: 558 SNTDMGTLIEVRRSWDAFIRPGGSRIPGHWVEPPPPADEIWAAYLVQQK 607
           SNTDMGTLIEVRRSWDAFIRPGGSRIPGHWVEPPPPADEIWAAYLV QK
Sbjct: 361 SNTDMGTLIEVRRSWDAFIRPGGSRIPGHWVEPPPPADEIWAAYLVPQK 406

[Close]

BLAST of Chy6G106670 vs. ExPASy TrEMBL
Match: A0A1S3AVD0 (U11/U12 small nuclear ribonucleoprotein 59 kDa protein isoform X1 OS=Cucumis melo OX=3656 GN=LOC103483235 PE=4 SV=1)

HSP 1 Score: 737.6 bits (1903), Expect = 4.0e-209
Identity = 391/409 (95.60%), Postives = 397/409 (97.07%), Query Frame = 0


Query: 198 MNPVPHQFTPQRPWFPVPPPNPPPSSSSSSSSFFWDNLNVRDRLRELQDTLNLAKSMQKE 257
           MN VPHQFTPQRPWFPVPPPNPP SSSSSS   FWDNLNVRDRLR+LQ+TL+LAKSMQKE
Sbjct: 1   MNSVPHQFTPQRPWFPVPPPNPPLSSSSSS---FWDNLNVRDRLRDLQETLDLAKSMQKE 60

Query: 258 LEMLMLVKEAKLSEQSADSLPNGSSIGEFCDYLEDRRISLELQESRSVEAAAGLMEKLRA 317
           LEMLML+KE KLSEQSADSLPNGSSIGEFCDYL+DRRISLELQESRSVEAAAGLMEKLRA
Sbjct: 61  LEMLMLIKEGKLSEQSADSLPNGSSIGEFCDYLKDRRISLELQESRSVEAAAGLMEKLRA 120

Query: 318 QLHPFRLDTDESSLWEAVRLSGKLSKAKRNKQWRKRKRKRIAESLAKERESFDQVDLEAD 377
           QL PFRLDTDESSLWEAVRLSGKLSKAKRNKQWRKRKRKRIAESLAKERESFDQVD+EAD
Sbjct: 121 QLQPFRLDTDESSLWEAVRLSGKLSKAKRNKQWRKRKRKRIAESLAKERESFDQVDMEAD 180

Query: 378 EWRAREIAKDIAKRKVEKMNEIARIKAKEEKKKLDSELELALIVEKLQELRSIRIQKLKK 437
           EWRAREIAKDIAKRKVEKM EIARIKAKEEKKKLDSELELALIVEKLQELRSIRIQKLKK
Sbjct: 181 EWRAREIAKDIAKRKVEKMKEIARIKAKEEKKKLDSELELALIVEKLQELRSIRIQKLKK 240

Query: 438 QGHFLPEEDDKFLEKVRAAVEEEERQALATADTDAAKDAIATAEVSRKTVPTYPESRDPD 497
           QGHFLPEEDDKFLEKVRAAVEEEERQALA ADTDAAKDAIATAEVSRKTVPTYPESRDPD
Sbjct: 241 QGHFLPEEDDKFLEKVRAAVEEEERQALAAADTDAAKDAIATAEVSRKTVPTYPESRDPD 300

Query: 498 SATDRSEERNDQRSAGADDKVSNTSINKEPGKQFGEVQGYGRMYDYAANLPMEFYHYYYG 557
           SATDRSEER DQRSAGADDKVSNTS NKEPGKQFGEVQGYGRMYDYAANLPMEFYHYYYG
Sbjct: 301 SATDRSEERIDQRSAGADDKVSNTSTNKEPGKQFGEVQGYGRMYDYAANLPMEFYHYYYG 360

Query: 558 SNTDMGTLIEVRRSWDAFIRPGGSRIPGHWVEPPPPADEIWAAYLVQQK 607
           SNTDMGTLIEVRRSWDAFIRPGGSRIPGHWVEPPPPADEIWAAYLV QK
Sbjct: 361 SNTDMGTLIEVRRSWDAFIRPGGSRIPGHWVEPPPPADEIWAAYLVPQK 406

[Close]

BLAST of Chy6G106670 vs. ExPASy TrEMBL
Match: A0A5A7U5M4 (U11/U12 small nuclear ribonucleoprotein 59 kDa protein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold171G001550 PE=4 SV=1)

HSP 1 Score: 719.2 bits (1855), Expect = 1.5e-203
Identity = 390/438 (89.04%), Postives = 396/438 (90.41%), Query Frame = 0


Query: 198 MNPVPHQFTPQRPWFPVPPPNPPPSSSSSSSSFFWDNLNVRDRLRELQDTLNLAKSMQKE 257
           MN VPHQFTPQRPWFPVPPPNPP SSSSSS   FWDNLNVRDRLR+LQ+TL+LAKSMQKE
Sbjct: 1   MNSVPHQFTPQRPWFPVPPPNPPLSSSSSS---FWDNLNVRDRLRDLQETLDLAKSMQKE 60

Query: 258 LEMLMLVKEAKLSEQSADSLPNGSSIGEFCDYLEDRRISLELQESRSVEAAAGLMEKLRA 317
           LEMLML+KE KLSEQSADSLPNGSSIGEFCDYL+DRRISLELQESRSVEAAAGLMEKLRA
Sbjct: 61  LEMLMLIKEGKLSEQSADSLPNGSSIGEFCDYLKDRRISLELQESRSVEAAAGLMEKLRA 120

Query: 318 QLHPFRLDTDESSLWEAVRLSGKLSKAKRNKQWRKRKRKRIAESLAK------------- 377
           QL PFRLDTDESSLWEAVRLSGKLSKAKRNKQWRKRKRK IAESLAK             
Sbjct: 121 QLQPFRLDTDESSLWEAVRLSGKLSKAKRNKQWRKRKRKCIAESLAKVVFFFLYPKLSNI 180

Query: 378 ----------------ERESFDQVDLEADEWRAREIAKDIAKRKVEKMNEIARIKAKEEK 437
                           ERESFDQVD+EADEWRAREIAKDIAKRKVEKM EIARIKAKEEK
Sbjct: 181 FTVILLFSPFFIVKSQERESFDQVDMEADEWRAREIAKDIAKRKVEKMKEIARIKAKEEK 240

Query: 438 KKLDSELELALIVEKLQELRSIRIQKLKKQGHFLPEEDDKFLEKVRAAVEEEERQALATA 497
           KKLDSELELALIVEKLQELRSIRIQKLKKQGHFLPEEDDKFLEKVRAAVEEEERQALA A
Sbjct: 241 KKLDSELELALIVEKLQELRSIRIQKLKKQGHFLPEEDDKFLEKVRAAVEEEERQALAAA 300

Query: 498 DTDAAKDAIATAEVSRKTVPTYPESRDPDSATDRSEERNDQRSAGADDKVSNTSINKEPG 557
           DTDAAKDAIATAEVSRKTVPTYPESRDPDSATDRSEER DQRSAGADDKVSNTS NKEPG
Sbjct: 301 DTDAAKDAIATAEVSRKTVPTYPESRDPDSATDRSEERIDQRSAGADDKVSNTSTNKEPG 360

Query: 558 KQFGEVQGYGRMYDYAANLPMEFYHYYYGSNTDMGTLIEVRRSWDAFIRPGGSRIPGHWV 607
           KQFGEVQGYGRMYDYAANLPMEFYHYYYGSNTDMGTLIEVRRSWDAFIRPGGSRIPGHWV
Sbjct: 361 KQFGEVQGYGRMYDYAANLPMEFYHYYYGSNTDMGTLIEVRRSWDAFIRPGGSRIPGHWV 420

[Close]

BLAST of Chy6G106670 vs. ExPASy TrEMBL
Match: A0A6J1EAK8 (U11/U12 small nuclear ribonucleoprotein 59 kDa protein isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111432209 PE=4 SV=1)

HSP 1 Score: 662.5 bits (1708), Expect = 1.7e-186
Identity = 357/410 (87.07%), Postives = 376/410 (91.71%), Query Frame = 0


Query: 198 MNPVPHQFTPQRPWFPVPPPNPPPSSSSSSSSFFWDNLNVRDRLRELQDTLNLAKSMQKE 257
           MNPVPHQF  Q P F +PPPN PPS SS     FWDNLNVRDRLR+LQD+L+LAKSMQKE
Sbjct: 1   MNPVPHQFAAQPPRFLMPPPNQPPSCSS-----FWDNLNVRDRLRDLQDSLDLAKSMQKE 60

Query: 258 LEMLMLVKEAKLSEQSADSLPNGSSIGEFCDYLEDRRISLELQESRSVEAAAGLMEKLRA 317
           LEML ++KE K SEQSAD+LP  SSIGEF DYLED+RISLELQESRSVE AA LM++LR 
Sbjct: 61  LEMLTIIKEGKSSEQSADNLPYDSSIGEFSDYLEDKRISLELQESRSVEVAAALMKRLRE 120

Query: 318 QLHPFRLDTDESSLWEAVRLSGKLSKAKRNKQWRKRKRKRIAESLAKERESFDQVDLEAD 377
           QLHPFR+DTDESSL EAV+LS KLSKAKRNKQWRKRKRKRIAESLAKERESFDQVD EAD
Sbjct: 121 QLHPFRIDTDESSLREAVKLSTKLSKAKRNKQWRKRKRKRIAESLAKERESFDQVDREAD 180

Query: 378 EWRAREIAKDIAKRKVEKMNEIARIKAKEEKKKLDSELELALIVEKLQELRSIRIQKLKK 437
           EWRAREIAKDIAKRKVEKM EIARIKAKEEKKKLDSELELALIVEKLQELRSIRIQKLKK
Sbjct: 181 EWRAREIAKDIAKRKVEKMKEIARIKAKEEKKKLDSELELALIVEKLQELRSIRIQKLKK 240

Query: 438 QGHFLPEEDDKFLEKVRAAVEEEERQALATADTDAAKDAIATAEVSRKTVPTYP-ESRDP 497
           QGHFLPEEDDKFLEKVRAAVEEEERQALA ADTDAAKDAIATAEVSRKT+P+Y  ESRDP
Sbjct: 241 QGHFLPEEDDKFLEKVRAAVEEEERQALAAADTDAAKDAIATAEVSRKTIPSYNLESRDP 300

Query: 498 DSATDRSEERNDQRSAGADDKVSNTSINKEPGKQFGEVQGYGRMYDYAANLPMEFYHYYY 557
           DSAT+RSEERNDQR+A  DDKVSN S NKEPGKQFGEVQG+GR YDYAANLPMEFYHYYY
Sbjct: 301 DSATERSEERNDQRTASVDDKVSNISTNKEPGKQFGEVQGFGRAYDYAANLPMEFYHYYY 360

Query: 558 GSNTDMGTLIEVRRSWDAFIRPGGSRIPGHWVEPPPPADEIWAAYLVQQK 607
           GSNTDMGTLIEVRRSWDAFIRPGGSRIPGHWV+PPPPADEIWAAYLV+ K
Sbjct: 361 GSNTDMGTLIEVRRSWDAFIRPGGSRIPGHWVQPPPPADEIWAAYLVRPK 405

[Close]

BLAST of Chy6G106670 vs. NCBI nr
Match: XP_004134317.1 (U11/U12 small nuclear ribonucleoprotein 59 kDa protein isoform X1 [Cucumis sativus] >KGN56473.1 hypothetical protein Csa_009926 [Cucumis sativus])

HSP 1 Score: 757 bits (1954), Expect = 2.06e-271
Identity = 400/409 (97.80%), Postives = 404/409 (98.78%), Query Frame = 0


Query: 198 MNPVPHQFTPQRPWFPVPPPNPPPSSSSSSSSFFWDNLNVRDRLRELQDTLNLAKSMQKE 257
           MNPVPHQFTPQRPWFPVPPPNPPPSSSSSSS FFWDNLNVRDRLRELQDTLNLAKSMQKE
Sbjct: 1   MNPVPHQFTPQRPWFPVPPPNPPPSSSSSSS-FFWDNLNVRDRLRELQDTLNLAKSMQKE 60

Query: 258 LEMLMLVKEAKLSEQSADSLPNGSSIGEFCDYLEDRRISLELQESRSVEAAAGLMEKLRA 317
           LEMLMLVKEAKLSEQS DSLPNGSSIGEFCDYLEDRRISLELQESRSVEAAAGLMEKLRA
Sbjct: 61  LEMLMLVKEAKLSEQSTDSLPNGSSIGEFCDYLEDRRISLELQESRSVEAAAGLMEKLRA 120

Query: 318 QLHPFRLDTDESSLWEAVRLSGKLSKAKRNKQWRKRKRKRIAESLAKERESFDQVDLEAD 377
           QLHPFRLDTDESSLWEAVRLSGKLSKAKRNKQWRKRKRKR+AESLAKERESFDQVDLEAD
Sbjct: 121 QLHPFRLDTDESSLWEAVRLSGKLSKAKRNKQWRKRKRKRVAESLAKERESFDQVDLEAD 180

Query: 378 EWRAREIAKDIAKRKVEKMNEIARIKAKEEKKKLDSELELALIVEKLQELRSIRIQKLKK 437
           EWRAREIAKDIAKRKVEKMNEIARIKAKEEKKKLDSELELALIVEKLQELRSIRIQKLKK
Sbjct: 181 EWRAREIAKDIAKRKVEKMNEIARIKAKEEKKKLDSELELALIVEKLQELRSIRIQKLKK 240

Query: 438 QGHFLPEEDDKFLEKVRAAVEEEERQALATADTDAAKDAIATAEVSRKTVPTYPESRDPD 497
           QGHFLPEEDDKFLEKVRAAVEEEERQALA ADTDAAKDAIATAEVSRKTVPTYPESRDPD
Sbjct: 241 QGHFLPEEDDKFLEKVRAAVEEEERQALAAADTDAAKDAIATAEVSRKTVPTYPESRDPD 300

Query: 498 SATDRSEERNDQRSAGADDKVSNTSINKEPGKQFGEVQGYGRMYDYAANLPMEFYHYYYG 557
           SATDRSEERNDQRSAGAD+KVSNTS NKEPGKQFGE+QGYGRMYDYAANLPMEFYHYYYG
Sbjct: 301 SATDRSEERNDQRSAGADEKVSNTSTNKEPGKQFGELQGYGRMYDYAANLPMEFYHYYYG 360

Query: 558 SNTDMGTLIEVRRSWDAFIRPGGSRIPGHWVEPPPPADEIWAAYLVQQK 606
           SNTDMGTLIEVRRSWDAFIRPGGSRIPGHWVEPPPP+DEIWAAYLV QK
Sbjct: 361 SNTDMGTLIEVRRSWDAFIRPGGSRIPGHWVEPPPPSDEIWAAYLVPQK 408

[Close]

BLAST of Chy6G106670 vs. NCBI nr
Match: XP_008437978.1 (PREDICTED: U11/U12 small nuclear ribonucleoprotein 59 kDa protein isoform X1 [Cucumis melo] >TYK17633.1 U11/U12 small nuclear ribonucleoprotein 59 kDa protein isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 733 bits (1893), Expect = 3.63e-262
Identity = 391/409 (95.60%), Postives = 397/409 (97.07%), Query Frame = 0


Query: 198 MNPVPHQFTPQRPWFPVPPPNPPPSSSSSSSSFFWDNLNVRDRLRELQDTLNLAKSMQKE 257
           MN VPHQFTPQRPWFPVPPPNPP SSSSSS   FWDNLNVRDRLR+LQ+TL+LAKSMQKE
Sbjct: 1   MNSVPHQFTPQRPWFPVPPPNPPLSSSSSS---FWDNLNVRDRLRDLQETLDLAKSMQKE 60

Query: 258 LEMLMLVKEAKLSEQSADSLPNGSSIGEFCDYLEDRRISLELQESRSVEAAAGLMEKLRA 317
           LEMLML+KE KLSEQSADSLPNGSSIGEFCDYL+DRRISLELQESRSVEAAAGLMEKLRA
Sbjct: 61  LEMLMLIKEGKLSEQSADSLPNGSSIGEFCDYLKDRRISLELQESRSVEAAAGLMEKLRA 120

Query: 318 QLHPFRLDTDESSLWEAVRLSGKLSKAKRNKQWRKRKRKRIAESLAKERESFDQVDLEAD 377
           QL PFRLDTDESSLWEAVRLSGKLSKAKRNKQWRKRKRKRIAESLAKERESFDQVD+EAD
Sbjct: 121 QLQPFRLDTDESSLWEAVRLSGKLSKAKRNKQWRKRKRKRIAESLAKERESFDQVDMEAD 180

Query: 378 EWRAREIAKDIAKRKVEKMNEIARIKAKEEKKKLDSELELALIVEKLQELRSIRIQKLKK 437
           EWRAREIAKDIAKRKVEKM EIARIKAKEEKKKLDSELELALIVEKLQELRSIRIQKLKK
Sbjct: 181 EWRAREIAKDIAKRKVEKMKEIARIKAKEEKKKLDSELELALIVEKLQELRSIRIQKLKK 240

Query: 438 QGHFLPEEDDKFLEKVRAAVEEEERQALATADTDAAKDAIATAEVSRKTVPTYPESRDPD 497
           QGHFLPEEDDKFLEKVRAAVEEEERQALA ADTDAAKDAIATAEVSRKTVPTYPESRDPD
Sbjct: 241 QGHFLPEEDDKFLEKVRAAVEEEERQALAAADTDAAKDAIATAEVSRKTVPTYPESRDPD 300

Query: 498 SATDRSEERNDQRSAGADDKVSNTSINKEPGKQFGEVQGYGRMYDYAANLPMEFYHYYYG 557
           SATDRSEER DQRSAGADDKVSNTS NKEPGKQFGEVQGYGRMYDYAANLPMEFYHYYYG
Sbjct: 301 SATDRSEERIDQRSAGADDKVSNTSTNKEPGKQFGEVQGYGRMYDYAANLPMEFYHYYYG 360

Query: 558 SNTDMGTLIEVRRSWDAFIRPGGSRIPGHWVEPPPPADEIWAAYLVQQK 606
           SNTDMGTLIEVRRSWDAFIRPGGSRIPGHWVEPPPPADEIWAAYLV QK
Sbjct: 361 SNTDMGTLIEVRRSWDAFIRPGGSRIPGHWVEPPPPADEIWAAYLVPQK 406

[Close]

BLAST of Chy6G106670 vs. NCBI nr
Match: KAA0048935.1 (U11/U12 small nuclear ribonucleoprotein 59 kDa protein isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 715 bits (1845), Expect = 2.13e-254
Identity = 390/438 (89.04%), Postives = 396/438 (90.41%), Query Frame = 0


Query: 198 MNPVPHQFTPQRPWFPVPPPNPPPSSSSSSSSFFWDNLNVRDRLRELQDTLNLAKSMQKE 257
           MN VPHQFTPQRPWFPVPPPNPP SSSSSS   FWDNLNVRDRLR+LQ+TL+LAKSMQKE
Sbjct: 1   MNSVPHQFTPQRPWFPVPPPNPPLSSSSSS---FWDNLNVRDRLRDLQETLDLAKSMQKE 60

Query: 258 LEMLMLVKEAKLSEQSADSLPNGSSIGEFCDYLEDRRISLELQESRSVEAAAGLMEKLRA 317
           LEMLML+KE KLSEQSADSLPNGSSIGEFCDYL+DRRISLELQESRSVEAAAGLMEKLRA
Sbjct: 61  LEMLMLIKEGKLSEQSADSLPNGSSIGEFCDYLKDRRISLELQESRSVEAAAGLMEKLRA 120

Query: 318 QLHPFRLDTDESSLWEAVRLSGKLSKAKRNKQWRKRKRKRIAESLAK------------- 377
           QL PFRLDTDESSLWEAVRLSGKLSKAKRNKQWRKRKRK IAESLAK             
Sbjct: 121 QLQPFRLDTDESSLWEAVRLSGKLSKAKRNKQWRKRKRKCIAESLAKVVFFFLYPKLSNI 180

Query: 378 ----------------ERESFDQVDLEADEWRAREIAKDIAKRKVEKMNEIARIKAKEEK 437
                           ERESFDQVD+EADEWRAREIAKDIAKRKVEKM EIARIKAKEEK
Sbjct: 181 FTVILLFSPFFIVKSQERESFDQVDMEADEWRAREIAKDIAKRKVEKMKEIARIKAKEEK 240

Query: 438 KKLDSELELALIVEKLQELRSIRIQKLKKQGHFLPEEDDKFLEKVRAAVEEEERQALATA 497
           KKLDSELELALIVEKLQELRSIRIQKLKKQGHFLPEEDDKFLEKVRAAVEEEERQALA A
Sbjct: 241 KKLDSELELALIVEKLQELRSIRIQKLKKQGHFLPEEDDKFLEKVRAAVEEEERQALAAA 300

Query: 498 DTDAAKDAIATAEVSRKTVPTYPESRDPDSATDRSEERNDQRSAGADDKVSNTSINKEPG 557
           DTDAAKDAIATAEVSRKTVPTYPESRDPDSATDRSEER DQRSAGADDKVSNTS NKEPG
Sbjct: 301 DTDAAKDAIATAEVSRKTVPTYPESRDPDSATDRSEERIDQRSAGADDKVSNTSTNKEPG 360

Query: 558 KQFGEVQGYGRMYDYAANLPMEFYHYYYGSNTDMGTLIEVRRSWDAFIRPGGSRIPGHWV 606
           KQFGEVQGYGRMYDYAANLPMEFYHYYYGSNTDMGTLIEVRRSWDAFIRPGGSRIPGHWV
Sbjct: 361 KQFGEVQGYGRMYDYAANLPMEFYHYYYGSNTDMGTLIEVRRSWDAFIRPGGSRIPGHWV 420

[Close]

BLAST of Chy6G106670 vs. NCBI nr
Match: XP_031737698.1 (U11/U12 small nuclear ribonucleoprotein 59 kDa protein isoform X2 [Cucumis sativus])

HSP 1 Score: 705 bits (1820), Expect = 2.71e-251
Identity = 379/390 (97.18%), Postives = 382/390 (97.95%), Query Frame = 0


Query: 198 MNPVPHQFTPQRPWFPVPPPNPPPSSSSSSSSFFWDNLNVRDRLRELQDTLNLAKSMQKE 257
           MNPVPHQFTPQRPWFPVPPPNPPPSSSSSSS FFWDNLNVRDRLRELQDTLNLAKSMQKE
Sbjct: 1   MNPVPHQFTPQRPWFPVPPPNPPPSSSSSSS-FFWDNLNVRDRLRELQDTLNLAKSMQKE 60

Query: 258 LEMLMLVKEAKLSEQSADSLPNGSSIGEFCDYLEDRRISLELQESRSVEAAAGLMEKLRA 317
           LEMLMLVKEAKLSEQS DSLPNGSSIGEFCDYLEDRRISLELQESRSVEAAAGLMEKLRA
Sbjct: 61  LEMLMLVKEAKLSEQSTDSLPNGSSIGEFCDYLEDRRISLELQESRSVEAAAGLMEKLRA 120

Query: 318 QLHPFRLDTDESSLWEAVRLSGKLSKAKRNKQWRKRKRKRIAESLAKERESFDQVDLEAD 377
           QLHPFRLDTDESSLWEAVRLSGKLSKAKRNKQWRKRKRKR+AESLAKERESFDQVDLEAD
Sbjct: 121 QLHPFRLDTDESSLWEAVRLSGKLSKAKRNKQWRKRKRKRVAESLAKERESFDQVDLEAD 180

Query: 378 EWRAREIAKDIAKRKVEKMNEIARIKAKEEKKKLDSELELALIVEKLQELRSIRIQKLKK 437
           EWRAREIAKDIAKRKVEKMNEIARIKAKEEKKKLDSELELALIVEKLQELRSIRIQKLKK
Sbjct: 181 EWRAREIAKDIAKRKVEKMNEIARIKAKEEKKKLDSELELALIVEKLQELRSIRIQKLKK 240

Query: 438 QGHFLPEEDDKFLEKVRAAVEEEERQALATADTDAAKDAIATAEVSRKTVPTYPESRDPD 497
           QGHFLPEEDDKFLEKVRAAVEEEERQALA ADTDAAKDAIATAEVSRKTVPTYPESRDPD
Sbjct: 241 QGHFLPEEDDKFLEKVRAAVEEEERQALAAADTDAAKDAIATAEVSRKTVPTYPESRDPD 300

Query: 498 SATDRSEERNDQRSAGADDKVSNTSINKEPGKQFGEVQGYGRMYDYAANLPMEFYHYYYG 557
           SATDRSEERNDQRSAGAD+KVSNTS NKEPGKQFGE+QGYGRMYDYAANLPMEFYHYYYG
Sbjct: 301 SATDRSEERNDQRSAGADEKVSNTSTNKEPGKQFGELQGYGRMYDYAANLPMEFYHYYYG 360

Query: 558 SNTDMGTLIEVRRSWDAFIRPGGSRIPGHW 587
           SNTDMGTLIEVRRSWDAFIRPGGS  P  W
Sbjct: 361 SNTDMGTLIEVRRSWDAFIRPGGS--PERW 387

[Close]

BLAST of Chy6G106670 vs. NCBI nr
Match: XP_038877454.1 (U11/U12 small nuclear ribonucleoprotein 59 kDa protein isoform X1 [Benincasa hispida] >XP_038877455.1 U11/U12 small nuclear ribonucleoprotein 59 kDa protein isoform X1 [Benincasa hispida] >XP_038877456.1 U11/U12 small nuclear ribonucleoprotein 59 kDa protein isoform X1 [Benincasa hispida])

HSP 1 Score: 677 bits (1747), Expect = 5.72e-240
Identity = 363/410 (88.54%), Postives = 382/410 (93.17%), Query Frame = 0


Query: 198 MNPVPHQFTPQRPWFPVPPPNPPPSSSSSSSSFFWDNLNVRDRLRELQDTLNLAKSMQKE 257
           MNPVPHQF PQ PWFPVPPPNPPPSS SS    FWDNLNVRDRLR+LQDTL+LAKSMQKE
Sbjct: 1   MNPVPHQFAPQPPWFPVPPPNPPPSSCSS----FWDNLNVRDRLRDLQDTLDLAKSMQKE 60

Query: 258 LEMLMLVKEAKLSEQSADSLPNGSSIGEFCDYLEDRRISLELQESRSVEAAAGLMEKLRA 317
           LEMLM+VKE   SEQSAD+LPNGSSIGEF DYL+DRRI+ ELQESRSVE AA LM++LRA
Sbjct: 61  LEMLMIVKEGNSSEQSADNLPNGSSIGEFSDYLKDRRINSELQESRSVEIAAALMKRLRA 120

Query: 318 QLHPFRLDTDESSLWEAVRLSGKLSKAKRNKQWRKRKRKRIAESLAKERESFDQVDLEAD 377
           QLHPF L TDESSL EAV+LSGKL KAKRNKQWRK+KRKRIAESLAKERESFDQVD EAD
Sbjct: 121 QLHPFSLATDESSLSEAVKLSGKLLKAKRNKQWRKKKRKRIAESLAKERESFDQVDQEAD 180

Query: 378 EWRAREIAKDIAKRKVEKMNEIARIKAKEEKKKLDSELELALIVEKLQELRSIRIQKLKK 437
           +WRAREIAKDIAKRKVEKM EIARIKAKEEKKKLDSELELALIVEKLQELRSIRIQKLKK
Sbjct: 181 KWRAREIAKDIAKRKVEKMKEIARIKAKEEKKKLDSELELALIVEKLQELRSIRIQKLKK 240

Query: 438 QGHFLPEEDDKFLEKVRAAVEEEERQALATADTDAAKDAIATAEVSRKTVPTY-PESRDP 497
           QGHFLPEEDDKFLEKVRAAVEEEERQALA ADTDAAKDAIATAEVSRKT+P+Y PESRDP
Sbjct: 241 QGHFLPEEDDKFLEKVRAAVEEEERQALAAADTDAAKDAIATAEVSRKTIPSYNPESRDP 300

Query: 498 DSATDRSEERNDQRSAGADDKVSNTSINKEPGKQFGEVQGYGRMYDYAANLPMEFYHYYY 557
            SAT+ SEERNDQR+A ADDK+SNTS +KEPGKQFGEVQGYGRMYDYA NLPMEFYHYYY
Sbjct: 301 ASATNGSEERNDQRTASADDKISNTSTDKEPGKQFGEVQGYGRMYDYAVNLPMEFYHYYY 360

Query: 558 GSNTDMGTLIEVRRSWDAFIRPGGSRIPGHWVEPPPPADEIWAAYLVQQK 606
           GSNTDMGTLIEVRRSWDAFIRPGGSRIPGHWV+PPPPADEIWAAYLV+ K
Sbjct: 361 GSNTDMGTLIEVRRSWDAFIRPGGSRIPGHWVQPPPPADEIWAAYLVRPK 406

[Close]

BLAST of Chy6G106670 vs. TAIR 10
Match: AT2G46200.1 (unknown protein; Has 2968 Blast hits to 2381 proteins in 310 species: Archae - 16; Bacteria - 188; Metazoa - 1070; Fungi - 227; Plants - 145; Viruses - 4; Other Eukaryotes - 1318 (source: NCBI BLink). )

HSP 1 Score: 337.0 bits (863), Expect = 3.1e-92
Identity = 204/409 (49.88%), Postives = 266/409 (65.04%), Query Frame = 0


Query: 202 PHQFTPQRP---WFPVPPPNPPPSSSSSSSSFFWDNLNVRDRLRELQDTLNLAKSMQKEL 261
           P  F P  P   W P+ PP+PP          FW+  N+ D+L++LQDTLNLAKSM+KEL
Sbjct: 3   PANFQPPNPPFHWAPMLPPDPP------RCGMFWNTKNITDQLKQLQDTLNLAKSMEKEL 62

Query: 262 EMLMLVKEAKLSEQSADSLPNGSSIGEFCDYLEDRRISLELQESRSVEAAAGLMEKLRAQ 321
           E L ++K+AK S ++A      S +    +YLE R++ L  QE  SV+AA  LM  LRAQ
Sbjct: 63  EALKMIKDAKGSVENA---VQDSGV----EYLEARKMDLGQQEMLSVDAANSLMSTLRAQ 122

Query: 322 LHPFRLDTDESSLWE----AVRLSGKLSKAKRNKQWRKRKRKRIAESLAKERESFDQVDL 381
           L PFR   DE+S WE    AVRL+ K+ K+ RNK W+KRKR+  AE  AKE E F+Q D 
Sbjct: 123 LEPFRFVVDENSPWEEKSAAVRLTCKMKKSIRNKLWKKRKRRCAAEMRAKEPERFEQADR 182

Query: 382 EADEWRAREIAKDIAKRKVEKMNEIARIKAKEEKKKLDSELELALIVEKLQELRSIRIQK 441
           EADEWR +E+AKD+A RKV++M  I +IKAK E+K+L+ ELELALIVE++QELRS+RI+K
Sbjct: 183 EADEWREKEMAKDMANRKVDEMKAIEKIKAKRERKRLEPELELALIVEEMQELRSLRIEK 242

Query: 442 LKKQGHFLPEEDDKFLEKVRAAVEEEERQALATADTDAAKDAIATAEVSRKTVPTYPESR 501
           LKKQGHFLPEEDDKF E VRAAVE+EE QA +  +T+  +  IA+ E +  T        
Sbjct: 243 LKKQGHFLPEEDDKFFESVRAAVEQEENQAQSLINTETEEHVIASEENTTLTT------- 302

Query: 502 DPDSATDRSEERNDQRSAGADDKVSNTSINKEPGKQFGEVQGYGRMYDYAANLPMEFYHY 561
              + T+   +++   +A + ++      N                 D  +NLP+E YHY
Sbjct: 303 --SNKTNNDTDKDSNTNAASCERTMKAPDNG---------------CDNISNLPVEVYHY 362

Query: 562 YYGSNTDMGTLIEVRRSWDAFIRPGGSRIPGHWVEPPPPADEIWAAYLV 604
           YYGSN DMG LIE+RR WDA++  GGSRIPGHWV+P PPA+EIWA+ LV
Sbjct: 363 YYGSNIDMGRLIEIRREWDAYLSAGGSRIPGHWVQPSPPANEIWASCLV 374

[Close]

BLAST of Chy6G106670 vs. TAIR 10
Match: AT2G46200.2 (unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 337.0 bits (863), Expect = 3.1e-92
Identity = 204/409 (49.88%), Postives = 266/409 (65.04%), Query Frame = 0


Query: 202 PHQFTPQRP---WFPVPPPNPPPSSSSSSSSFFWDNLNVRDRLRELQDTLNLAKSMQKEL 261
           P  F P  P   W P+ PP+PP          FW+  N+ D+L++LQDTLNLAKSM+KEL
Sbjct: 3   PANFQPPNPPFHWAPMLPPDPP------RCGMFWNTKNITDQLKQLQDTLNLAKSMEKEL 62

Query: 262 EMLMLVKEAKLSEQSADSLPNGSSIGEFCDYLEDRRISLELQESRSVEAAAGLMEKLRAQ 321
           E L ++K+AK S ++A      S +    +YLE R++ L  QE  SV+AA  LM  LRAQ
Sbjct: 63  EALKMIKDAKGSVENA---VQDSGV----EYLEARKMDLGQQEMLSVDAANSLMSTLRAQ 122

Query: 322 LHPFRLDTDESSLWE----AVRLSGKLSKAKRNKQWRKRKRKRIAESLAKERESFDQVDL 381
           L PFR   DE+S WE    AVRL+ K+ K+ RNK W+KRKR+  AE  AKE E F+Q D 
Sbjct: 123 LEPFRFVVDENSPWEEKSAAVRLTCKMKKSIRNKLWKKRKRRCAAEMRAKEPERFEQADR 182

Query: 382 EADEWRAREIAKDIAKRKVEKMNEIARIKAKEEKKKLDSELELALIVEKLQELRSIRIQK 441
           EADEWR +E+AKD+A RKV++M  I +IKAK E+K+L+ ELELALIVE++QELRS+RI+K
Sbjct: 183 EADEWREKEMAKDMANRKVDEMKAIEKIKAKRERKRLEPELELALIVEEMQELRSLRIEK 242

Query: 442 LKKQGHFLPEEDDKFLEKVRAAVEEEERQALATADTDAAKDAIATAEVSRKTVPTYPESR 501
           LKKQGHFLPEEDDKF E VRAAVE+EE QA +  +T+  +  IA+ E +  T        
Sbjct: 243 LKKQGHFLPEEDDKFFESVRAAVEQEENQAQSLINTETEEHVIASEENTTLTT------- 302

Query: 502 DPDSATDRSEERNDQRSAGADDKVSNTSINKEPGKQFGEVQGYGRMYDYAANLPMEFYHY 561
              + T+   +++   +A + ++      N                 D  +NLP+E YHY
Sbjct: 303 --SNKTNNDTDKDSNTNAASCERTMKAPDNG---------------CDNISNLPVEVYHY 362

Query: 562 YYGSNTDMGTLIEVRRSWDAFIRPGGSRIPGHWVEPPPPADEIWAAYLV 604
           YYGSN DMG LIE+RR WDA++  GGSRIPGHWV+P PPA+EIWA+ LV
Sbjct: 363 YYGSNIDMGRLIEIRREWDAYLSAGGSRIPGHWVQPSPPANEIWASCLV 374

[Close]

BLAST of Chy6G106670 vs. TAIR 10
Match: AT5G52900.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 61.6 bits (148), Expect = 2.5e-09
Identity = 66/225 (29.33%), Postives = 97/225 (43.11%), Query Frame = 0


Query: 9   VESFSNSWLLNV----------KQSYDATSK-----VMDYQIVKPSRLLDET---QSFKF 68
           ++SFS SWL+N            Q+Y+ +S       MD ++    R   +T    SFKF
Sbjct: 15  IDSFSYSWLVNFPSLEATIDDHHQTYEDSSSSSSFIEMDPRLPPSRRFFIKTSHESSFKF 74

Query: 69  NTSIHPS---VLLSHADELFFDGSVRPVNINHITGASNTSDFVPVELNSS-------LSS 128
           +  +  S     L HADELF DG V P  +   T A+   +  P++  +S       L+S
Sbjct: 75  DNFVSFSDEDHSLVHADELFRDGYVMPYRLKP-TSAATEEESEPLDTTTSEKIDTRGLNS 134

Query: 129 LTSSPAIENRCHSGRWRKTLCMLQKSLGCLSPICHK-------VDPAEVNWDDDIK-QKS 188
             S  +        +W     +L K L  L+P+C +       V    +  D  I+   S
Sbjct: 135 KPSPTSSRKLRRVSKW-----VLLKYLDFLTPLCKRLRRCRSAVTTGSIGMDSRIRVTTS 194

Query: 189 CDVRSQRQSPRVSPQSNIGPSSGDW---CHLENSIYEAILHCKKS 195
           C  R        SP+ ++      W   C  E+SIYEA+LHCKKS
Sbjct: 195 CRSRVYSDEMTSSPRISVA-DDYYWRRSCDSESSIYEAVLHCKKS 232

The following BLAST results are available for this feature:

BLAST of Chy6G106670 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8VYD3	4.3e-91	49.88	U11/U12 small nuclear ribonucleoprotein 59 kDa protein OS=Arabidopsis thaliana O...	[more]
Q84JK8	3.5e-08	29.33	Probable membrane-associated kinase regulator 6 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of Chy6G106670 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L417	3.4e-216	97.80	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G121010 PE=4 SV=1	[more]
A0A5D3D0C0	4.0e-209	95.60	U11/U12 small nuclear ribonucleoprotein 59 kDa protein isoform X1 OS=Cucumis mel...	[more]
A0A1S3AVD0	4.0e-209	95.60	U11/U12 small nuclear ribonucleoprotein 59 kDa protein isoform X1 OS=Cucumis mel...	[more]
A0A5A7U5M4	1.5e-203	89.04	U11/U12 small nuclear ribonucleoprotein 59 kDa protein isoform X1 OS=Cucumis mel...	[more]
A0A6J1EAK8	1.7e-186	87.07	U11/U12 small nuclear ribonucleoprotein 59 kDa protein isoform X2 OS=Cucurbita m...	[more]

BLAST of Chy6G106670 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004134317.1	2.06e-271	97.80	U11/U12 small nuclear ribonucleoprotein 59 kDa protein isoform X1 [Cucumis sativ...	[more]
XP_008437978.1	3.63e-262	95.60	PREDICTED: U11/U12 small nuclear ribonucleoprotein 59 kDa protein isoform X1 [Cu...	[more]
KAA0048935.1	2.13e-254	89.04	U11/U12 small nuclear ribonucleoprotein 59 kDa protein isoform X1 [Cucumis melo ...	[more]
XP_031737698.1	2.71e-251	97.18	U11/U12 small nuclear ribonucleoprotein 59 kDa protein isoform X2 [Cucumis sativ...	[more]
XP_038877454.1	5.72e-240	88.54	U11/U12 small nuclear ribonucleoprotein 59 kDa protein isoform X1 [Benincasa his...	[more]

BLAST of Chy6G106670 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G46200.1	3.1e-92	49.88	unknown protein; Has 2968 Blast hits to 2381 proteins in 310 species: Archae - 1...	[more]
AT2G46200.2	3.1e-92	49.88	unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae ...	[more]
AT5G52900.1	2.5e-09	29.33	unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae -...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 390..410
None	No IPR available	COILS	Coil	Coil	coord: 241..261
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 479..531
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 153..172
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 209..223
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 209..229
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 157..172
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 514..528
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 488..513
None	No IPR available	PANTHER	PTHR48190	FAMILY NOT NAMED	coord: 200..606
IPR031974	Programmed cell death protein 7	PFAM	PF16021	PDCD7	coord: 303..602 e-value: 3.3E-19 score: 69.2

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy6G106670.1	Chy6G106670.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane