Chy6G106150 (gene) Cucumber (hystrix) v1

Overview


Name	Chy6G106150
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Pyridoxal 5'-phosphate synthase
Location	chrH06: 584034 .. 585396 (-)
RNA-Seq Expression	Chy6G106150
Synteny	Chy6G106150

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGATCGGCAGTGGCGCCATGGAAGTCCCTTCTTCTCAGTGCTTTGGAATCTAATGGCCGTTTCAAGCATTCCAAATTCTTGCAGCTGGTACATTTCCCTCTCTATTTCTCTCAAGTTCAAGTTTCCTTTAATATATCTTCTTCACGGTCGATTTCTATGTTGAATTTGTTTTCAGGCAACGATAGGAACTAATGGAAGGCCCTCAAATCGAACAGTCGTTTTCAGAGGATTTGAAGAAGGCACCGACAGGATCCATATTTACACAGATTCTAGAAATCGCAAGGTTTTATTTTTTATTTTTTATTTAGGGGGAAGCTCTATATTTCGTCTTAGATCGTTCAATTCATGAGGCCATTGCTGTTTTTCTATGTATTTTGATGTAATGATTATATGGGTTTCTTGATTTTGAGGGCAATCTGTAGTATGTGTGTTGTGTTGGTGTTTTCAATTACGTAATGCATGTGTCTGGGAACAAGACAAGCGATAAAATAAGCTCAGGGGAATTGTTTGTGATGGATTAGGTCAGAATTTTTTATATTAAGCATCTGGGTTTTGTACTGCAAATGAAATTCACTTTTGGTTGATTCTGCAGATTGAAGAGCTTAAGAATTGTCCATTTGCTGAGGTAACTATTCTCGTCTCTCCCTGGCTCTTAACACAGTTTAGAATACCAATTATTTATTCATGCCAGTCTTTGTACCTTATAATCTTTAGATTACTACTGAAATATGCGCCAATTTGAGTCAAATTTTTGATTTTGTATGCTTCGTTCTGTAAGATTTGTTGGTATTTCACCGATTCATGGGAGCAATTTCGCATCAGTGGGAGAATGGAGGTTGTCGATGCATCATGTGTTGATGCTACAAAGTTTAAGGTTGTGGCCATGGCCCTTTCTTCTTATGACTTAAAGCTTGTTCTAAATTTTCAACAGTTCACTTGTTCAATTGGGTATGGTCTTATACATCTTATTGTGGTCATTTGGATTCTGAATGCAGCAAAGAGCAGAAGCCTGGTCCTCCATTTCTCCAAAGTCAAGAATGCAGTATTTGGGGCCTAGTCCAGGTCTTCCTCACCTTGCTGAACAACCAGCCAAGGAACCTTTTCTAGATTCTTGTTCAGGTCCTGTTGATGCATTTTGTTTGCTGGTCTTCGATCCTGATCAGGTTTGTAATGGTTTCTTTCTAGATTAGCACATAATTCTTGCATTTCCATCTTGTTATTTTCCTTTATGTTACCTTTTATCCTTTTTCGTTCGCAGGTTGATTATCTGAATCTGAGGAGTGATGAAAGGAATTCGTTTAGAACTATTTCAAGTTTTGGAGGGGAGAAATTATGGGAAACGGAGAGGATAAATTGCTAG

mRNA sequence

ATGGGATCGGCAGTGGCGCCATGGAAGTCCCTTCTTCTCAGTGCTTTGGAATCTAATGGCCGTTTCAAGCATTCCAAATTCTTGCAGCTGGCAACGATAGGAACTAATGGAAGGCCCTCAAATCGAACAGTCGTTTTCAGAGGATTTGAAGAAGGCACCGACAGGATCCATATTTACACAGATTCTAGAAATCGCAAGATTGAAGAGCTTAAGAATTGTCCATTTGCTGAGATTTGTTGGTATTTCACCGATTCATGGGAGCAATTTCGCATCAGTGGGAGAATGGAGGTTGTCGATGCATCATGTGTTGATGCTACAAAGTTTAAGCAAAGAGCAGAAGCCTGGTCCTCCATTTCTCCAAAGTCAAGAATGCAGTATTTGGGGCCTAGTCCAGGTCTTCCTCACCTTGCTGAACAACCAGCCAAGGAACCTTTTCTAGATTCTTGTTCAGGTCCTGTTGATGCATTTTGTTTGCTGGTCTTCGATCCTGATCAGGTTGATTATCTGAATCTGAGGAGTGATGAAAGGAATTCGTTTAGAACTATTTCAAGTTTTGGAGGGGAGAAATTATGGGAAACGGAGAGGATAAATTGCTAG

Coding sequence (CDS)

ATGGGATCGGCAGTGGCGCCATGGAAGTCCCTTCTTCTCAGTGCTTTGGAATCTAATGGCCGTTTCAAGCATTCCAAATTCTTGCAGCTGGCAACGATAGGAACTAATGGAAGGCCCTCAAATCGAACAGTCGTTTTCAGAGGATTTGAAGAAGGCACCGACAGGATCCATATTTACACAGATTCTAGAAATCGCAAGATTGAAGAGCTTAAGAATTGTCCATTTGCTGAGATTTGTTGGTATTTCACCGATTCATGGGAGCAATTTCGCATCAGTGGGAGAATGGAGGTTGTCGATGCATCATGTGTTGATGCTACAAAGTTTAAGCAAAGAGCAGAAGCCTGGTCCTCCATTTCTCCAAAGTCAAGAATGCAGTATTTGGGGCCTAGTCCAGGTCTTCCTCACCTTGCTGAACAACCAGCCAAGGAACCTTTTCTAGATTCTTGTTCAGGTCCTGTTGATGCATTTTGTTTGCTGGTCTTCGATCCTGATCAGGTTGATTATCTGAATCTGAGGAGTGATGAAAGGAATTCGTTTAGAACTATTTCAAGTTTTGGAGGGGAGAAATTATGGGAAACGGAGAGGATAAATTGCTAG

Protein sequence

MGSAVAPWKSLLLSALESNGRFKHSKFLQLATIGTNGRPSNRTVVFRGFEEGTDRIHIYTDSRNRKIEELKNCPFAEICWYFTDSWEQFRISGRMEVVDASCVDATKFKQRAEAWSSISPKSRMQYLGPSPGLPHLAEQPAKEPFLDSCSGPVDAFCLLVFDPDQVDYLNLRSDERNSFRTISSFGGEKLWETERINC*

Homology

[Close]

BLAST of Chy6G106150 vs. ExPASy Swiss-Prot
Match: Q9ZPY1 (Pyridoxine/pyridoxamine 5'-phosphate oxidase 2 OS=Arabidopsis thaliana OX=3702 GN=PPOX2 PE=1 SV=2)

HSP 1 Score: 250.8 bits (639), Expect = 1.3e-65
Identity = 113/197 (57.36%), Postives = 155/197 (78.68%), Query Frame = 0


Query: 1   MGSAVAPWKSLLLSALESNGRFKHSKFLQLATIGTNGRPSNRTVVFRGFEEGTDRIHIYT 60
           MG+ VAPWK LL  A+E+N    HS ++QLATIG NGRPSNRTVVFRGFEE +DRI I T
Sbjct: 1   MGTHVAPWKQLLFGAIEANSHLSHSSYVQLATIGLNGRPSNRTVVFRGFEENSDRIQINT 60

Query: 61  DSRNRKIEELKNCPFAEICWYFTDSWEQFRISGRMEVVDASCVDATKFKQRAEAWSSISP 120
           D R+RKIEELK+CPF+E+CWYF+D+WEQFRI+GR+EV+DAS  D TK +QR +AW + S 
Sbjct: 61  DLRSRKIEELKHCPFSEMCWYFSDTWEQFRINGRIEVIDASNPDQTKLQQREKAWFANSL 120

Query: 121 KSRMQYLGPSPGLPHLAEQPAKEPFLDSCSGPVDAFCLLVFDPDQVDYLNLRSDERNSFR 180
           +SR+ Y+ P+PG P  +EQ +++  LD  SGPV  +CLL+ +P++VDYLNL++++R  F 
Sbjct: 121 RSRLIYVCPTPGSPCNSEQSSQQVKLDPSSGPVPEYCLLLLEPEKVDYLNLKTNQRLFFS 180

Query: 181 TISSFGGEKLWETERIN 198
           ++++  GEK W +E++N
Sbjct: 181 SMATGTGEKCWTSEKVN 197

[Close]

BLAST of Chy6G106150 vs. ExPASy Swiss-Prot
Match: P21159 (Pyridoxine/pyridoxamine 5'-phosphate oxidase OS=Myxococcus xanthus OX=34 GN=pdxH PE=1 SV=2)

HSP 1 Score: 57.4 bits (137), Expect = 2.2e-07
Identity = 34/94 (36.17%), Postives = 53/94 (56.38%), Query Frame = 0


Query: 30  LATIGTNGRPSNRTVVFRGFEEGTDRIHIYTDSRNRKIEELKNCPFAEICWYFTDSWEQF 89
           +AT+G +GRPS R V+ + F+        YT+  +RK  E +  P+A +C+Y+    EQ 
Sbjct: 57  VATVGDDGRPSARVVLLKDFD--ARGFVFYTNHESRKGREARAHPYAALCFYWQPLNEQV 116

Query: 90  RISGRMEVVDASCVDATKFKQRAE-----AWSSI 119
           R+ GR+E V  +  DA  F+ RA      AW+S+
Sbjct: 117 RVEGRVERVTDAEADA-YFQSRARGSQVGAWASL 147

[Close]

BLAST of Chy6G106150 vs. ExPASy Swiss-Prot
Match: Q1DCS1 (Pyridoxine/pyridoxamine 5'-phosphate oxidase OS=Myxococcus xanthus (strain DK1622) OX=246197 GN=pdxH PE=3 SV=2)

HSP 1 Score: 57.4 bits (137), Expect = 2.2e-07
Identity = 34/94 (36.17%), Postives = 53/94 (56.38%), Query Frame = 0


Query: 30  LATIGTNGRPSNRTVVFRGFEEGTDRIHIYTDSRNRKIEELKNCPFAEICWYFTDSWEQF 89
           +AT+G +GRPS R V+ + F+        YT+  +RK  E +  P+A +C+Y+    EQ 
Sbjct: 43  VATVGDDGRPSARVVLLKDFD--ARGFVFYTNHESRKGREARAHPYAALCFYWQPLNEQV 102

Query: 90  RISGRMEVVDASCVDATKFKQRAE-----AWSSI 119
           R+ GR+E V  +  DA  F+ RA      AW+S+
Sbjct: 103 RVEGRVERVTDAEADA-YFQSRARGSQVGAWASL 133

[Close]

BLAST of Chy6G106150 vs. ExPASy Swiss-Prot
Match: P53210 (Uncharacterized protein YGR017W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=YGR017W PE=1 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 6.3e-07
Identity = 38/112 (33.93%), Postives = 56/112 (50.00%), Query Frame = 0


Query: 1   MGSAVAPWKSLLLSALESNGRFKHSKFLQLATIG-TNGRPSNRTVVFRGF---EEGTDRI 60
           M   +APW  + + + ++N     S   Q AT+     +P  RTVVFR F   ++ T+ +
Sbjct: 1   MSHQMAPWIPMFIQSCKNNTEPFVS--FQFATVDELTNKPRCRTVVFRDFLFHDKRTNVL 60

Query: 61  HIYTDSRNRKIEE------------LKNC--PFAEICWYFTDSWEQFRISGR 95
              TD R+ KI E             K C  PF E C+YF ++WEQ+R SG+
Sbjct: 61  TFNTDMRSSKITESFITPNSNNSSDSKRCETPFFEACFYFPETWEQYRFSGQ 110

[Close]

BLAST of Chy6G106150 vs. ExPASy Swiss-Prot
Match: Q7P203 (Pyridoxine/pyridoxamine 5'-phosphate oxidase OS=Chromobacterium violaceum (strain ATCC 12472 / DSM 30191 / JCM 1249 / NBRC 12614 / NCIMB 9131 / NCTC 9757) OX=243365 GN=pdxH PE=3 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 3.1e-06
Identity = 30/94 (31.91%), Postives = 52/94 (55.32%), Query Frame = 0


Query: 28  LQLATIGTNGRPSNRTVVFRGFEEGTDRIHIYTDSRNRKIEELKNCPFAEICWYFTDSWE 87
           + LA IG +GRPS+R V+ +G E+G  ++  YT+ ++RK + L+  P+  + +++ +   
Sbjct: 48  MNLAAIGADGRPSSRIVLLKGVEDG--QLLFYTNYQSRKGQALEANPYVALNFFWPELER 107

Query: 88  QFRISGRMEVVDASCVDA----TKFKQRAEAWSS 118
           Q RI G+   V     DA      +  R  AW+S
Sbjct: 108 QVRIEGKAARVAPEVSDAYFASRPYTSRLGAWAS 139

[Close]

BLAST of Chy6G106150 vs. ExPASy TrEMBL
Match: A0A0A0L745 (Pyridoxal 5'-phosphate synthase OS=Cucumis sativus OX=3659 GN=Csa_3G119450 PE=4 SV=1)

HSP 1 Score: 403.7 bits (1036), Expect = 4.5e-109
Identity = 190/197 (96.45%), Postives = 194/197 (98.48%), Query Frame = 0


Query: 1   MGSAVAPWKSLLLSALESNGRFKHSKFLQLATIGTNGRPSNRTVVFRGFEEGTDRIHIYT 60
           MGSAVAPWKSLLLSALESNG FKHSKFLQLATIGTNGRPSNRTVVFRGFEEGTDRIHIYT
Sbjct: 1   MGSAVAPWKSLLLSALESNGHFKHSKFLQLATIGTNGRPSNRTVVFRGFEEGTDRIHIYT 60

Query: 61  DSRNRKIEELKNCPFAEICWYFTDSWEQFRISGRMEVVDASCVDATKFKQRAEAWSSISP 120
           DSRNRKIEELKNCPFAEICWYFT+SWEQFRISGRMEVVDASCVDATKFKQRAEAWSSISP
Sbjct: 61  DSRNRKIEELKNCPFAEICWYFTESWEQFRISGRMEVVDASCVDATKFKQRAEAWSSISP 120

Query: 121 KSRMQYLGPSPGLPHLAEQPAKEPFLDSCSGPVDAFCLLVFDPDQVDYLNLRSDERNSFR 180
           KSRMQYLGPSPGLPHLAEQPAKEPFLDSCSGPVD FCLLVFDPDQVDYLN+RSDERNSF+
Sbjct: 121 KSRMQYLGPSPGLPHLAEQPAKEPFLDSCSGPVDTFCLLVFDPDQVDYLNVRSDERNSFK 180

Query: 181 TISSFGGEKLWETERIN 198
            I+SFGGEKLWETERIN
Sbjct: 181 AITSFGGEKLWETERIN 197

[Close]

BLAST of Chy6G106150 vs. ExPASy TrEMBL
Match: A0A5A7U3K2 (Pyridoxal 5'-phosphate synthase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold171G00920 PE=4 SV=1)

HSP 1 Score: 387.9 bits (995), Expect = 2.6e-104
Identity = 184/197 (93.40%), Postives = 190/197 (96.45%), Query Frame = 0


Query: 1   MGSAVAPWKSLLLSALESNGRFKHSKFLQLATIGTNGRPSNRTVVFRGFEEGTDRIHIYT 60
           MGSAVAPWKSLLL ALESNG+ KHSKFLQLATIGTNGRPSNRTVVFR FEEGTDRIHIYT
Sbjct: 1   MGSAVAPWKSLLLRALESNGQIKHSKFLQLATIGTNGRPSNRTVVFREFEEGTDRIHIYT 60

Query: 61  DSRNRKIEELKNCPFAEICWYFTDSWEQFRISGRMEVVDASCVDATKFKQRAEAWSSISP 120
           DSR+RKIEELKNCPFAEICWYFTD+WEQFRISGRMEVVDASC+DATKFKQRAEAWSSISP
Sbjct: 61  DSRSRKIEELKNCPFAEICWYFTDTWEQFRISGRMEVVDASCLDATKFKQRAEAWSSISP 120

Query: 121 KSRMQYLGPSPGLPHLAEQPAKEPFLDSCSGPVDAFCLLVFDPDQVDYLNLRSDERNSFR 180
           KSRMQYLGPSPGLPHLAEQPAKEPFLDS SGPVDAFCLLVFDPDQVDYLNL+S+ERN FR
Sbjct: 121 KSRMQYLGPSPGLPHLAEQPAKEPFLDSYSGPVDAFCLLVFDPDQVDYLNLKSEERNLFR 180

Query: 181 TISSFGGEKLWETERIN 198
            I SFGGEKLWETERIN
Sbjct: 181 AIPSFGGEKLWETERIN 197

[Close]

BLAST of Chy6G106150 vs. ExPASy TrEMBL
Match: A0A1S4DSQ7 (Pyridoxal 5'-phosphate synthase OS=Cucumis melo OX=3656 GN=LOC103483173 PE=4 SV=1)

HSP 1 Score: 387.5 bits (994), Expect = 3.4e-104
Identity = 183/197 (92.89%), Postives = 190/197 (96.45%), Query Frame = 0


Query: 1   MGSAVAPWKSLLLSALESNGRFKHSKFLQLATIGTNGRPSNRTVVFRGFEEGTDRIHIYT 60
           MGSAVAPWKSLLL ALESNG+ KHSKFLQLATIGTNGRPSNRTVVFR FEEGTDRIHIYT
Sbjct: 1   MGSAVAPWKSLLLRALESNGQIKHSKFLQLATIGTNGRPSNRTVVFREFEEGTDRIHIYT 60

Query: 61  DSRNRKIEELKNCPFAEICWYFTDSWEQFRISGRMEVVDASCVDATKFKQRAEAWSSISP 120
           DSR+RKIEELKNCPFAE+CWYFTD+WEQFRISGRMEVVDASC+DATKFKQRAEAWSSISP
Sbjct: 61  DSRSRKIEELKNCPFAEVCWYFTDTWEQFRISGRMEVVDASCLDATKFKQRAEAWSSISP 120

Query: 121 KSRMQYLGPSPGLPHLAEQPAKEPFLDSCSGPVDAFCLLVFDPDQVDYLNLRSDERNSFR 180
           KSRMQYLGPSPGLPHLAEQPAKEPFLDS SGPVDAFCLLVFDPDQVDYLNL+S+ERN FR
Sbjct: 121 KSRMQYLGPSPGLPHLAEQPAKEPFLDSYSGPVDAFCLLVFDPDQVDYLNLKSEERNLFR 180

Query: 181 TISSFGGEKLWETERIN 198
            I SFGGEKLWETERIN
Sbjct: 181 AIPSFGGEKLWETERIN 197

[Close]

BLAST of Chy6G106150 vs. ExPASy TrEMBL
Match: A0A5D3DBA0 (Pyridoxal 5'-phosphate synthase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold291G00900 PE=4 SV=1)

HSP 1 Score: 387.5 bits (994), Expect = 3.4e-104
Identity = 183/197 (92.89%), Postives = 190/197 (96.45%), Query Frame = 0


Query: 1   MGSAVAPWKSLLLSALESNGRFKHSKFLQLATIGTNGRPSNRTVVFRGFEEGTDRIHIYT 60
           MGSAVAPWKSLLL ALESNG+ KHSKFLQLATIGTNGRPSNRTVVFR FEEGTDRIHIYT
Sbjct: 1   MGSAVAPWKSLLLRALESNGQIKHSKFLQLATIGTNGRPSNRTVVFREFEEGTDRIHIYT 60

Query: 61  DSRNRKIEELKNCPFAEICWYFTDSWEQFRISGRMEVVDASCVDATKFKQRAEAWSSISP 120
           DSR+RKIEELKNCPFAE+CWYFTD+WEQFRISGRMEVVDASC+DATKFKQRAEAWSSISP
Sbjct: 61  DSRSRKIEELKNCPFAEVCWYFTDTWEQFRISGRMEVVDASCLDATKFKQRAEAWSSISP 120

Query: 121 KSRMQYLGPSPGLPHLAEQPAKEPFLDSCSGPVDAFCLLVFDPDQVDYLNLRSDERNSFR 180
           KSRMQYLGPSPGLPHLAEQPAKEPFLDS SGPVDAFCLLVFDPDQVDYLNL+S+ERN FR
Sbjct: 121 KSRMQYLGPSPGLPHLAEQPAKEPFLDSYSGPVDAFCLLVFDPDQVDYLNLKSEERNLFR 180

Query: 181 TISSFGGEKLWETERIN 198
            I SFGGEKLWETERIN
Sbjct: 181 AIPSFGGEKLWETERIN 197

[Close]

BLAST of Chy6G106150 vs. ExPASy TrEMBL
Match: A0A6J1EFU0 (Pyridoxal 5'-phosphate synthase OS=Cucurbita moschata OX=3662 GN=LOC111432127 PE=4 SV=1)

HSP 1 Score: 350.5 bits (898), Expect = 4.6e-93
Identity = 166/197 (84.26%), Postives = 177/197 (89.85%), Query Frame = 0


Query: 1   MGSAVAPWKSLLLSALESNGRFKHSKFLQLATIGTNGRPSNRTVVFRGFEEGTDRIHIYT 60
           MGSA APWKSLLLSALESN + KHS FL LATIG NGRPSNRTVVFRGFEEGTDRIHIYT
Sbjct: 24  MGSAAAPWKSLLLSALESNAQIKHSTFLHLATIGANGRPSNRTVVFRGFEEGTDRIHIYT 83

Query: 61  DSRNRKIEELKNCPFAEICWYFTDSWEQFRISGRMEVVDASCVDATKFKQRAEAWSSISP 120
           DSR+RKIEELK CPFAEI WYFT+SWEQFRISGR+EVVDASC+DATKFK+RAEAWSSISP
Sbjct: 84  DSRSRKIEELKTCPFAEISWYFTESWEQFRISGRIEVVDASCLDATKFKKRAEAWSSISP 143

Query: 121 KSRMQYLGPSPGLPHLAEQPAKEPFLDSCSGPVDAFCLLVFDPDQVDYLNLRSDERNSFR 180
           KSRMQYLGPSP LP++AEQPAKEP LDSCSGPVDAFCLLV DPDQVDYLNL+S ER  F+
Sbjct: 144 KSRMQYLGPSPNLPYIAEQPAKEPVLDSCSGPVDAFCLLVLDPDQVDYLNLKSAERKLFK 203

Query: 181 TISSFGGEKLWETERIN 198
            I   G E LWE+ERIN
Sbjct: 204 AIPCVGRETLWESERIN 220

[Close]

BLAST of Chy6G106150 vs. NCBI nr
Match: XP_004133803.1 (pyridoxine/pyridoxamine 5'-phosphate oxidase 2 isoform X1 [Cucumis sativus] >KGN56412.1 hypothetical protein Csa_010621 [Cucumis sativus])

HSP 1 Score: 401 bits (1031), Expect = 4.03e-141
Identity = 190/197 (96.45%), Postives = 194/197 (98.48%), Query Frame = 0


Query: 1   MGSAVAPWKSLLLSALESNGRFKHSKFLQLATIGTNGRPSNRTVVFRGFEEGTDRIHIYT 60
           MGSAVAPWKSLLLSALESNG FKHSKFLQLATIGTNGRPSNRTVVFRGFEEGTDRIHIYT
Sbjct: 1   MGSAVAPWKSLLLSALESNGHFKHSKFLQLATIGTNGRPSNRTVVFRGFEEGTDRIHIYT 60

Query: 61  DSRNRKIEELKNCPFAEICWYFTDSWEQFRISGRMEVVDASCVDATKFKQRAEAWSSISP 120
           DSRNRKIEELKNCPFAEICWYFT+SWEQFRISGRMEVVDASCVDATKFKQRAEAWSSISP
Sbjct: 61  DSRNRKIEELKNCPFAEICWYFTESWEQFRISGRMEVVDASCVDATKFKQRAEAWSSISP 120

Query: 121 KSRMQYLGPSPGLPHLAEQPAKEPFLDSCSGPVDAFCLLVFDPDQVDYLNLRSDERNSFR 180
           KSRMQYLGPSPGLPHLAEQPAKEPFLDSCSGPVD FCLLVFDPDQVDYLN+RSDERNSF+
Sbjct: 121 KSRMQYLGPSPGLPHLAEQPAKEPFLDSCSGPVDTFCLLVFDPDQVDYLNVRSDERNSFK 180

Query: 181 TISSFGGEKLWETERIN 197
            I+SFGGEKLWETERIN
Sbjct: 181 AITSFGGEKLWETERIN 197

[Close]

BLAST of Chy6G106150 vs. NCBI nr
Match: KAA0048877.1 (pyridoxine/pyridoxamine 5'-phosphate oxidase 2 [Cucumis melo var. makuwa])

HSP 1 Score: 385 bits (990), Expect = 7.20e-135
Identity = 184/197 (93.40%), Postives = 190/197 (96.45%), Query Frame = 0


Query: 1   MGSAVAPWKSLLLSALESNGRFKHSKFLQLATIGTNGRPSNRTVVFRGFEEGTDRIHIYT 60
           MGSAVAPWKSLLL ALESNG+ KHSKFLQLATIGTNGRPSNRTVVFR FEEGTDRIHIYT
Sbjct: 1   MGSAVAPWKSLLLRALESNGQIKHSKFLQLATIGTNGRPSNRTVVFREFEEGTDRIHIYT 60

Query: 61  DSRNRKIEELKNCPFAEICWYFTDSWEQFRISGRMEVVDASCVDATKFKQRAEAWSSISP 120
           DSR+RKIEELKNCPFAEICWYFTD+WEQFRISGRMEVVDASC+DATKFKQRAEAWSSISP
Sbjct: 61  DSRSRKIEELKNCPFAEICWYFTDTWEQFRISGRMEVVDASCLDATKFKQRAEAWSSISP 120

Query: 121 KSRMQYLGPSPGLPHLAEQPAKEPFLDSCSGPVDAFCLLVFDPDQVDYLNLRSDERNSFR 180
           KSRMQYLGPSPGLPHLAEQPAKEPFLDS SGPVDAFCLLVFDPDQVDYLNL+S+ERN FR
Sbjct: 121 KSRMQYLGPSPGLPHLAEQPAKEPFLDSYSGPVDAFCLLVFDPDQVDYLNLKSEERNLFR 180

Query: 181 TISSFGGEKLWETERIN 197
            I SFGGEKLWETERIN
Sbjct: 181 AIPSFGGEKLWETERIN 197

[Close]

BLAST of Chy6G106150 vs. NCBI nr
Match: XP_008437871.1 (PREDICTED: pyridoxine/pyridoxamine 5'-phosphate oxidase 2 [Cucumis melo] >XP_016898998.1 PREDICTED: pyridoxine/pyridoxamine 5'-phosphate oxidase 2 [Cucumis melo] >TYK20828.1 pyridoxine/pyridoxamine 5'-phosphate oxidase 2 [Cucumis melo var. makuwa])

HSP 1 Score: 385 bits (989), Expect = 1.02e-134
Identity = 183/197 (92.89%), Postives = 190/197 (96.45%), Query Frame = 0


Query: 1   MGSAVAPWKSLLLSALESNGRFKHSKFLQLATIGTNGRPSNRTVVFRGFEEGTDRIHIYT 60
           MGSAVAPWKSLLL ALESNG+ KHSKFLQLATIGTNGRPSNRTVVFR FEEGTDRIHIYT
Sbjct: 1   MGSAVAPWKSLLLRALESNGQIKHSKFLQLATIGTNGRPSNRTVVFREFEEGTDRIHIYT 60

Query: 61  DSRNRKIEELKNCPFAEICWYFTDSWEQFRISGRMEVVDASCVDATKFKQRAEAWSSISP 120
           DSR+RKIEELKNCPFAE+CWYFTD+WEQFRISGRMEVVDASC+DATKFKQRAEAWSSISP
Sbjct: 61  DSRSRKIEELKNCPFAEVCWYFTDTWEQFRISGRMEVVDASCLDATKFKQRAEAWSSISP 120

Query: 121 KSRMQYLGPSPGLPHLAEQPAKEPFLDSCSGPVDAFCLLVFDPDQVDYLNLRSDERNSFR 180
           KSRMQYLGPSPGLPHLAEQPAKEPFLDS SGPVDAFCLLVFDPDQVDYLNL+S+ERN FR
Sbjct: 121 KSRMQYLGPSPGLPHLAEQPAKEPFLDSYSGPVDAFCLLVFDPDQVDYLNLKSEERNLFR 180

Query: 181 TISSFGGEKLWETERIN 197
            I SFGGEKLWETERIN
Sbjct: 181 AIPSFGGEKLWETERIN 197

[Close]

BLAST of Chy6G106150 vs. NCBI nr
Match: XP_038874699.1 (pyridoxine/pyridoxamine 5'-phosphate oxidase 2-like isoform X2 [Benincasa hispida])

HSP 1 Score: 367 bits (943), Expect = 1.05e-127
Identity = 173/197 (87.82%), Postives = 184/197 (93.40%), Query Frame = 0


Query: 1   MGSAVAPWKSLLLSALESNGRFKHSKFLQLATIGTNGRPSNRTVVFRGFEEGTDRIHIYT 60
           MGSA APWKSLLL ALESNGR KHSKFLQLATIG NGRPSNRTVVFRGFEEGTDRIHIYT
Sbjct: 1   MGSAAAPWKSLLLGALESNGRIKHSKFLQLATIGINGRPSNRTVVFRGFEEGTDRIHIYT 60

Query: 61  DSRNRKIEELKNCPFAEICWYFTDSWEQFRISGRMEVVDASCVDATKFKQRAEAWSSISP 120
           DSR RKIEELKNCPFAEICWYFT+SWEQFRISGR+EVVDA C+DATKFKQRAEAWSSISP
Sbjct: 61  DSRTRKIEELKNCPFAEICWYFTESWEQFRISGRIEVVDALCLDATKFKQRAEAWSSISP 120

Query: 121 KSRMQYLGPSPGLPHLAEQPAKEPFLDSCSGPVDAFCLLVFDPDQVDYLNLRSDERNSFR 180
           KSR+QYLGPSPGLP+  EQP KEPF+DS SGPVD+FCLLVF+PDQVDYLNL+S+ERN F+
Sbjct: 121 KSRLQYLGPSPGLPYPGEQPVKEPFVDSYSGPVDSFCLLVFNPDQVDYLNLKSEERNLFK 180

Query: 181 TISSFGGEKLWETERIN 197
            I SFGGEKLWETERIN
Sbjct: 181 AIPSFGGEKLWETERIN 197

[Close]

BLAST of Chy6G106150 vs. NCBI nr
Match: XP_038899249.1 (pyridoxine/pyridoxamine 5'-phosphate oxidase 2 isoform X1 [Benincasa hispida])

HSP 1 Score: 366 bits (939), Expect = 4.29e-127
Identity = 172/197 (87.31%), Postives = 184/197 (93.40%), Query Frame = 0


Query: 1   MGSAVAPWKSLLLSALESNGRFKHSKFLQLATIGTNGRPSNRTVVFRGFEEGTDRIHIYT 60
           MGSA APWKSLLL ALESNGR KHSKFLQLATIG NGRPSNRTVVFRGFEEGTD+IHIYT
Sbjct: 1   MGSAAAPWKSLLLGALESNGRIKHSKFLQLATIGINGRPSNRTVVFRGFEEGTDKIHIYT 60

Query: 61  DSRNRKIEELKNCPFAEICWYFTDSWEQFRISGRMEVVDASCVDATKFKQRAEAWSSISP 120
           DSR RKIEELKNCPFAEICWYFT+SWEQFRISGR+EVVDASC+DATKFKQRAEAWSSISP
Sbjct: 61  DSRTRKIEELKNCPFAEICWYFTESWEQFRISGRIEVVDASCLDATKFKQRAEAWSSISP 120

Query: 121 KSRMQYLGPSPGLPHLAEQPAKEPFLDSCSGPVDAFCLLVFDPDQVDYLNLRSDERNSFR 180
           KSR+QYLGPSPGLP+  EQP KEPF+DS SGPVD+FCLLVF+PDQVDYLNL+S+ERN F+
Sbjct: 121 KSRLQYLGPSPGLPYPGEQPVKEPFVDSYSGPVDSFCLLVFNPDQVDYLNLKSEERNLFK 180

Query: 181 TISSFGGEKLWETERIN 197
            I SFGGEKLWET RIN
Sbjct: 181 AIPSFGGEKLWETGRIN 197

[Close]

BLAST of Chy6G106150 vs. TAIR 10
Match: AT2G46580.1 (Pyridoxamine 5'-phosphate oxidase family protein )

HSP 1 Score: 250.8 bits (639), Expect = 9.5e-67
Identity = 113/197 (57.36%), Postives = 155/197 (78.68%), Query Frame = 0


Query: 1   MGSAVAPWKSLLLSALESNGRFKHSKFLQLATIGTNGRPSNRTVVFRGFEEGTDRIHIYT 60
           MG+ VAPWK LL  A+E+N    HS ++QLATIG NGRPSNRTVVFRGFEE +DRI I T
Sbjct: 1   MGTHVAPWKQLLFGAIEANSHLSHSSYVQLATIGLNGRPSNRTVVFRGFEENSDRIQINT 60

Query: 61  DSRNRKIEELKNCPFAEICWYFTDSWEQFRISGRMEVVDASCVDATKFKQRAEAWSSISP 120
           D R+RKIEELK+CPF+E+CWYF+D+WEQFRI+GR+EV+DAS  D TK +QR +AW + S 
Sbjct: 61  DLRSRKIEELKHCPFSEMCWYFSDTWEQFRINGRIEVIDASNPDQTKLQQREKAWFANSL 120

Query: 121 KSRMQYLGPSPGLPHLAEQPAKEPFLDSCSGPVDAFCLLVFDPDQVDYLNLRSDERNSFR 180
           +SR+ Y+ P+PG P  +EQ +++  LD  SGPV  +CLL+ +P++VDYLNL++++R  F 
Sbjct: 121 RSRLIYVCPTPGSPCNSEQSSQQVKLDPSSGPVPEYCLLLLEPEKVDYLNLKTNQRLFFS 180

Query: 181 TISSFGGEKLWETERIN 198
           ++++  GEK W +E++N
Sbjct: 181 SMATGTGEKCWTSEKVN 197

The following BLAST results are available for this feature:

BLAST of Chy6G106150 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZPY1	1.3e-65	57.36	Pyridoxine/pyridoxamine 5'-phosphate oxidase 2 OS=Arabidopsis thaliana OX=3702 G...	[more]
P21159	2.2e-07	36.17	Pyridoxine/pyridoxamine 5'-phosphate oxidase OS=Myxococcus xanthus OX=34 GN=pdxH...	[more]
Q1DCS1	2.2e-07	36.17	Pyridoxine/pyridoxamine 5'-phosphate oxidase OS=Myxococcus xanthus (strain DK162...	[more]
P53210	6.3e-07	33.93	Uncharacterized protein YGR017W OS=Saccharomyces cerevisiae (strain ATCC 204508 ...	[more]
Q7P203	3.1e-06	31.91	Pyridoxine/pyridoxamine 5'-phosphate oxidase OS=Chromobacterium violaceum (strai...	[more]

BLAST of Chy6G106150 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L745	4.5e-109	96.45	Pyridoxal 5'-phosphate synthase OS=Cucumis sativus OX=3659 GN=Csa_3G119450 PE=4 ...	[more]
A0A5A7U3K2	2.6e-104	93.40	Pyridoxal 5'-phosphate synthase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_...	[more]
A0A1S4DSQ7	3.4e-104	92.89	Pyridoxal 5'-phosphate synthase OS=Cucumis melo OX=3656 GN=LOC103483173 PE=4 SV=...	[more]
A0A5D3DBA0	3.4e-104	92.89	Pyridoxal 5'-phosphate synthase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A6J1EFU0	4.6e-93	84.26	Pyridoxal 5'-phosphate synthase OS=Cucurbita moschata OX=3662 GN=LOC111432127 PE...	[more]

BLAST of Chy6G106150 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004133803.1	4.03e-141	96.45	pyridoxine/pyridoxamine 5'-phosphate oxidase 2 isoform X1 [Cucumis sativus] >KGN...	[more]
KAA0048877.1	7.20e-135	93.40	pyridoxine/pyridoxamine 5'-phosphate oxidase 2 [Cucumis melo var. makuwa]	[more]
XP_008437871.1	1.02e-134	92.89	PREDICTED: pyridoxine/pyridoxamine 5'-phosphate oxidase 2 [Cucumis melo] >XP_016...	[more]
XP_038874699.1	1.05e-127	87.82	pyridoxine/pyridoxamine 5'-phosphate oxidase 2-like isoform X2 [Benincasa hispid...	[more]
XP_038899249.1	4.29e-127	87.31	pyridoxine/pyridoxamine 5'-phosphate oxidase 2 isoform X1 [Benincasa hispida]	[more]

BLAST of Chy6G106150 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G46580.1	9.5e-67	57.36	Pyridoxamine 5'-phosphate oxidase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR024624	Pyridoxamine 5'-phosphate oxidase, Alr4036 family, FMN-binding domain	PFAM	PF12766	Pyridox_oxase_2	coord: 6..98 e-value: 1.3E-27 score: 96.4
IPR024015	Pyridoxamine 5'-phosphate oxidase, probable FMN-dependent, Alr4036 family	TIGRFAM	TIGR04026	TIGR04026	coord: 6..197 e-value: 7.5E-51 score: 170.7
IPR012349	FMN-binding split barrel	GENE3D	2.30.110.10		coord: 3..197 e-value: 3.0E-55 score: 189.1
None	No IPR available	PIRSR	PIRSR000190-2	PIRSR000190-2	coord: 25..114 e-value: 3.5E-8 score: 31.1
None	No IPR available	PANTHER	PTHR10851:SF3	PYRIDOXINE/PYRIDOXAMINE 5'-PHOSPHATE OXIDASE 2	coord: 2..197
None	No IPR available	SUPERFAMILY	50475	FMN-binding split barrel	coord: 2..196
IPR000659	Pyridoxamine 5'-phosphate oxidase	PANTHER	PTHR10851	PYRIDOXINE-5-PHOSPHATE OXIDASE	coord: 2..197

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy6G106150.1	Chy6G106150.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009443	pyridoxal 5'-phosphate salvage
biological_process	GO:0008615	pyridoxine biosynthetic process
molecular_function	GO:0010181	FMN binding
molecular_function	GO:0004733	pyridoxamine-phosphate oxidase activity