Chy6G105910 (gene) Cucumber (hystrix) v1

Overview


Name	Chy6G105910
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Unknown protein
Location	chrH06: 434338 .. 435050 (+)
RNA-Seq Expression	Chy6G105910
Synteny	Chy6G105910

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGAAAGGGGGCAGTAGCCAGGTGGGTGCAGTGGCACATAATGTCATCAAAGGCAATAAATCAATCAAACTCTACCCCAGATACAAGCTACGCCAATTACTGATGCCTGCCAACAAATGCCAATCCTTTTTTTTTTTGTTTATATTTATATTCCTTTAATTGACAAAACCAACTTGGATAAGCCACGCGTGACGATATACTCAATGCGATTCCCTTATTTTACTACCAAAATCTCCCCCTCCCAGTCTCTTTCTCTCTCTCTGAAAATCTCTCTCCAGTATCTTCAATCACAGCATGGGTTTTTTCCCTTAAATCTAGCAGAGCTAATTGGAGTTTCTTCCAATGAATCATTTGTGAGATTCTTCTTCTTCCTGTTCTTTTGAGAAATGCAGGTGGGAATAGAAATTGAAGATGTGATGAAGGGGGAGGGAGAACAGAAGAAACAGAAGAACAGAAAGCTTAAGGCTGTGTGGGGATGTGTGGTATTAGTTTTGGTGAGTGTGTCAGGGGCGTTTTTAATGGGTTGGTGGGCAGTTCGATTCCATAGATCACAGAAGCAACAGTGGATGGTACCTTTTAGTCTTGTTTTGATGATTGCTCCCATCTTCGTTTTGATCTCTGTTTCCATCTCCAGTTTCTGCAATTCCATGGACAGAATTTCTTCTTTAGTTTCATCCTTGGATCACGATCGCCCACCTGAAATTAGATGA

mRNA sequence

ATGAAGAAAGGGGGCAGTAGCCAGGTGGGAATAGAAATTGAAGATGTGATGAAGGGGGAGGGAGAACAGAAGAAACAGAAGAACAGAAAGCTTAAGGCTGTGTGGGGATGTGTGGTATTAGTTTTGGTGAGTGTGTCAGGGGCGTTTTTAATGGGTTGGTGGGCAGTTCGATTCCATAGATCACAGAAGCAACAGTGGATGGTACCTTTTAGTCTTGTTTTGATGATTGCTCCCATCTTCGTTTTGATCTCTGTTTCCATCTCCAGTTTCTGCAATTCCATGGACAGAATTTCTTCTTTAGTTTCATCCTTGGATCACGATCGCCCACCTGAAATTAGATGA

Coding sequence (CDS)

ATGAAGAAAGGGGGCAGTAGCCAGGTGGGAATAGAAATTGAAGATGTGATGAAGGGGGAGGGAGAACAGAAGAAACAGAAGAACAGAAAGCTTAAGGCTGTGTGGGGATGTGTGGTATTAGTTTTGGTGAGTGTGTCAGGGGCGTTTTTAATGGGTTGGTGGGCAGTTCGATTCCATAGATCACAGAAGCAACAGTGGATGGTACCTTTTAGTCTTGTTTTGATGATTGCTCCCATCTTCGTTTTGATCTCTGTTTCCATCTCCAGTTTCTGCAATTCCATGGACAGAATTTCTTCTTTAGTTTCATCCTTGGATCACGATCGCCCACCTGAAATTAGATGA

Protein sequence

MKKGGSSQVGIEIEDVMKGEGEQKKQKNRKLKAVWGCVVLVLVSVSGAFLMGWWAVRFHRSQKQQWMVPFSLVLMIAPIFVLISVSISSFCNSMDRISSLVSSLDHDRPPEIR*

Homology

[Close]

BLAST of Chy6G105910 vs. ExPASy TrEMBL
Match: A0A0A0L8F5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G118220 PE=4 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 4.2e-51
Identity = 106/106 (100.00%), Postives = 106/106 (100.00%), Query Frame = 0


Query: 8   QVGIEIEDVMKGEGEQKKQKNRKLKAVWGCVVLVLVSVSGAFLMGWWAVRFHRSQKQQWM 67
           QVGIEIEDVMKGEGEQKKQKNRKLKAVWGCVVLVLVSVSGAFLMGWWAVRFHRSQKQQWM
Sbjct: 2   QVGIEIEDVMKGEGEQKKQKNRKLKAVWGCVVLVLVSVSGAFLMGWWAVRFHRSQKQQWM 61

Query: 68  VPFSLVLMIAPIFVLISVSISSFCNSMDRISSLVSSLDHDRPPEIR 114
           VPFSLVLMIAPIFVLISVSISSFCNSMDRISSLVSSLDHDRPPEIR
Sbjct: 62  VPFSLVLMIAPIFVLISVSISSFCNSMDRISSLVSSLDHDRPPEIR 107

[Close]

BLAST of Chy6G105910 vs. ExPASy TrEMBL
Match: A0A5D3DB24 (Putative permease/transmembrane protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold291G00680 PE=4 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 1.6e-50
Identity = 105/106 (99.06%), Postives = 105/106 (99.06%), Query Frame = 0


Query: 8   QVGIEIEDVMKGEGEQKKQKNRKLKAVWGCVVLVLVSVSGAFLMGWWAVRFHRSQKQQWM 67
           QVG EIEDVMKGEGEQKKQKNRKLKAVWGCVVLVLVSVSGAFLMGWWAVRFHRSQKQQWM
Sbjct: 2   QVGTEIEDVMKGEGEQKKQKNRKLKAVWGCVVLVLVSVSGAFLMGWWAVRFHRSQKQQWM 61

Query: 68  VPFSLVLMIAPIFVLISVSISSFCNSMDRISSLVSSLDHDRPPEIR 114
           VPFSLVLMIAPIFVLISVSISSFCNSMDRISSLVSSLDHDRPPEIR
Sbjct: 62  VPFSLVLMIAPIFVLISVSISSFCNSMDRISSLVSSLDHDRPPEIR 107

[Close]

BLAST of Chy6G105910 vs. ExPASy TrEMBL
Match: A0A0A0L5S1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G118200 PE=4 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 2.2e-15
Identity = 47/107 (43.93%), Postives = 67/107 (62.62%), Query Frame = 0


Query: 3   KGGSSQVGIEIEDVMKGEGEQKKQKN--RKLKAVWGCVVLVLVSVSGAFLMGWWAVRFHR 62
           +GG  + G  +E  MK E   KK+    +  K     + +V+  ++G  + GWW  +FH 
Sbjct: 9   RGGDEEAGFPMESAMKEEDRDKKRNGNMKSCKIATWVISMVVACLTGGLVFGWWVFQFHP 68

Query: 63  SQKQQWMVPFSLVLMIAPIFVLISVSISSFCNSMDR-ISSLVSSLDH 107
           + +Q WMVPFSLVLMIAPIFV++S+ IS+FCNSMD+  +S   S DH
Sbjct: 69  TNRQLWMVPFSLVLMIAPIFVMMSLLISAFCNSMDQTTTSAAPSSDH 115

[Close]

BLAST of Chy6G105910 vs. ExPASy TrEMBL
Match: A0A2P6SIS7 (Putative ATP-synthase-associated protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr1g0360861 PE=4 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 1.3e-07
Identity = 34/84 (40.48%), Postives = 46/84 (54.76%), Query Frame = 0


Query: 12 EIEDVMKGEGEQKKQKNRKLKAVWGCVVLVLVSVSGAFLMGWWAVRFHRSQKQQWMVPFS 71
          E ED    + E+   K R       C   +LVSV+G  L+GWW  ++H S +Q WMVPF 
Sbjct: 6  EDEDTSYSDLERSVVKRRA-----ACFGSILVSVAGGLLLGWWEYQYHPSYRQLWMVPFG 65

Query: 72 LVLMIAPIFVLISVSISSFCNSMD 96
          L+L   P+ V  S+ +S  CNS D
Sbjct: 66 LILFATPVIVWFSLVVSHICNSKD 84

[Close]

BLAST of Chy6G105910 vs. ExPASy TrEMBL
Match: A0A1Q3DED5 (Uncharacterized protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_34193 PE=4 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 1.7e-07
Identity = 33/88 (37.50%), Postives = 51/88 (57.95%), Query Frame = 0


Query: 20  EGEQKKQKNRKLKAVW-GCVVLVLVSVSGAFLMGWWAVRFHRSQKQQWMVPFSLVLMIAP 79
           E E  K++   +   W  CV   LVS++G   +GWW  + H +  Q WMVPFSL+L++ P
Sbjct: 7   EKEIIKKEQENIGRTWIACVWSFLVSMTGGLTLGWWEYKHHPTNSQLWMVPFSLILLVTP 66

Query: 80  IFVLISVSISSFCNSMDRISSLVSSLDH 107
           + +  SV  S+ C+S    S  V+SL++
Sbjct: 67  VIIWFSVFSSAICDSRGGESQRVTSLNN 94

[Close]

BLAST of Chy6G105910 vs. NCBI nr
Match: KGN56386.1 (hypothetical protein Csa_010779 [Cucumis sativus])

HSP 1 Score: 210 bits (535), Expect = 2.43e-68
Identity = 106/106 (100.00%), Postives = 106/106 (100.00%), Query Frame = 0


Query: 8   QVGIEIEDVMKGEGEQKKQKNRKLKAVWGCVVLVLVSVSGAFLMGWWAVRFHRSQKQQWM 67
           QVGIEIEDVMKGEGEQKKQKNRKLKAVWGCVVLVLVSVSGAFLMGWWAVRFHRSQKQQWM
Sbjct: 2   QVGIEIEDVMKGEGEQKKQKNRKLKAVWGCVVLVLVSVSGAFLMGWWAVRFHRSQKQQWM 61

Query: 68  VPFSLVLMIAPIFVLISVSISSFCNSMDRISSLVSSLDHDRPPEIR 113
           VPFSLVLMIAPIFVLISVSISSFCNSMDRISSLVSSLDHDRPPEIR
Sbjct: 62  VPFSLVLMIAPIFVLISVSISSFCNSMDRISSLVSSLDHDRPPEIR 107

[Close]

BLAST of Chy6G105910 vs. NCBI nr
Match: KAA0048855.1 (putative permease/transmembrane protein [Cucumis melo var. makuwa] >TYK20807.1 putative permease/transmembrane protein [Cucumis melo var. makuwa])

HSP 1 Score: 208 bits (530), Expect = 1.41e-67
Identity = 105/106 (99.06%), Postives = 105/106 (99.06%), Query Frame = 0


Query: 8   QVGIEIEDVMKGEGEQKKQKNRKLKAVWGCVVLVLVSVSGAFLMGWWAVRFHRSQKQQWM 67
           QVG EIEDVMKGEGEQKKQKNRKLKAVWGCVVLVLVSVSGAFLMGWWAVRFHRSQKQQWM
Sbjct: 2   QVGTEIEDVMKGEGEQKKQKNRKLKAVWGCVVLVLVSVSGAFLMGWWAVRFHRSQKQQWM 61

Query: 68  VPFSLVLMIAPIFVLISVSISSFCNSMDRISSLVSSLDHDRPPEIR 113
           VPFSLVLMIAPIFVLISVSISSFCNSMDRISSLVSSLDHDRPPEIR
Sbjct: 62  VPFSLVLMIAPIFVLISVSISSFCNSMDRISSLVSSLDHDRPPEIR 107

[Close]

BLAST of Chy6G105910 vs. NCBI nr
Match: KGN56384.1 (hypothetical protein Csa_011278 [Cucumis sativus])

HSP 1 Score: 92.4 bits (228), Expect = 2.16e-21
Identity = 50/109 (45.87%), Postives = 70/109 (64.22%), Query Frame = 0


Query: 3   KGGSSQVGIEIEDVMKGEGEQKKQKNRKLK----AVWGCVVLVLVSVSGAFLMGWWAVRF 62
           +GG  + G  +E  MK E   KK +N  +K    A W  + +V+  ++G  + GWW  +F
Sbjct: 9   RGGDEEAGFPMESAMKEEDRDKK-RNGNMKSCKIATW-VISMVVACLTGGLVFGWWVFQF 68

Query: 63  HRSQKQQWMVPFSLVLMIAPIFVLISVSISSFCNSMDRIS-SLVSSLDH 106
           H + +Q WMVPFSLVLMIAPIFV++S+ IS+FCNSMD+ + S   S DH
Sbjct: 69  HPTNRQLWMVPFSLVLMIAPIFVMMSLLISAFCNSMDQTTTSAAPSSDH 115

[Close]

BLAST of Chy6G105910 vs. NCBI nr
Match: KAF3973370.1 (hypothetical protein CMV_003195 [Castanea mollissima])

HSP 1 Score: 68.2 bits (165), Expect = 6.47e-12
Identity = 33/77 (42.86%), Postives = 50/77 (64.94%), Query Frame = 0


Query: 20 EGEQKKQKNRKLKAVWGCVVL---VLVSVSGAFLMGWWAVRFHRSQKQQWMVPFSLVLMI 79
          EG+++    RK + V  C+V    ++VS+ G  +MGWW   +HR+ +Q WMVPF LVL+I
Sbjct: 6  EGKEESHGERK-ERVKSCIVYSWSLMVSMIGGLIMGWWEYEYHRTNRQLWMVPFGLVLLI 65

Query: 80 APIFVLISVSISSFCNS 93
           P FV  S+ +S +C+S
Sbjct: 66 TPPFVWFSIFVSDWCSS 81

[Close]

BLAST of Chy6G105910 vs. NCBI nr
Match: GAV90789.1 (hypothetical protein CFOL_v3_34193 [Cephalotus follicularis])

HSP 1 Score: 66.6 bits (161), Expect = 1.55e-11
Identity = 33/88 (37.50%), Postives = 51/88 (57.95%), Query Frame = 0


Query: 20  EGEQKKQKNRKLKAVW-GCVVLVLVSVSGAFLMGWWAVRFHRSQKQQWMVPFSLVLMIAP 79
           E E  K++   +   W  CV   LVS++G   +GWW  + H +  Q WMVPFSL+L++ P
Sbjct: 7   EKEIIKKEQENIGRTWIACVWSFLVSMTGGLTLGWWEYKHHPTNSQLWMVPFSLILLVTP 66

Query: 80  IFVLISVSISSFCNSMDRISSLVSSLDH 106
           + +  SV  S+ C+S    S  V+SL++
Sbjct: 67  VIIWFSVFSSAICDSRGGESQRVTSLNN 94

The following BLAST results are available for this feature:

BLAST of Chy6G105910 vs.


Match Name	E-value	Identity	Description

BLAST of Chy6G105910 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L8F5	4.2e-51	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G118220 PE=4 SV=1	[more]
A0A5D3DB24	1.6e-50	99.06	Putative permease/transmembrane protein OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A0A0L5S1	2.2e-15	43.93	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G118200 PE=4 SV=1	[more]
A0A2P6SIS7	1.3e-07	40.48	Putative ATP-synthase-associated protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_...	[more]
A0A1Q3DED5	1.7e-07	37.50	Uncharacterized protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_34193 PE=4...	[more]

BLAST of Chy6G105910 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN56386.1	2.43e-68	100.00	hypothetical protein Csa_010779 [Cucumis sativus]	[more]
KAA0048855.1	1.41e-67	99.06	putative permease/transmembrane protein [Cucumis melo var. makuwa] >TYK20807.1 p...	[more]
KGN56384.1	2.16e-21	45.87	hypothetical protein Csa_011278 [Cucumis sativus]	[more]
KAF3973370.1	6.47e-12	42.86	hypothetical protein CMV_003195 [Castanea mollissima]	[more]
GAV90789.1	1.55e-11	37.50	hypothetical protein CFOL_v3_34193 [Cephalotus follicularis]	[more]

BLAST of Chy6G105910 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR032238	Putative ATP-synthase-associated protein	PFAM	PF16594	ATP-synt_Z	coord: 37..88 e-value: 1.0E-16 score: 60.2
None	No IPR available	PANTHER	PTHR35165	OS08G0113900 PROTEIN	coord: 13..110
None	No IPR available	PANTHER	PTHR35165:SF1	OS08G0113900 PROTEIN	coord: 13..110

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy6G105910.1	Chy6G105910.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane