Chy6G105740 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGCACAGTTGAGGTCTTTAATGGTGCTGATTTAAATCCTAATGCAAAAGAATGGAACCCTATTTACGATTGCGCTCCGGAGGAAGACCGATGCCTCTTTCTCACCTTCTCAAATGGCTTCCCCCTCACAGAGAACCAAATAGTCACCTTCTTCACCCGGTACGTGTACGTCTACCTATCTTTCTTTTTACCAACAATATACCTTAAATCAAGCAAATAGTATATGAGGTTTATGCAAGTTAAGAACCAGACCATGTTTTAAGTGATATATATATATATAATACATATATATATATATATATGTTGTTTTAGGTTCGCTCTGGATTTGTTAATGTTATAGAACTTATCCACTTTTAAGTAATGTAGAAAATTCGGAGAGTGCATCGAAAGGGTGTACGTGCATTATCCGGAGGGAGGGAAACAACTGCCATTGTTTGGGAAGGTGGTGTTTGTTGCATCTTCAATTCCAGCAATCGTTCTTGGAGGAAAAGAAGAAGCTAAGTTTTCTATTGATAGCAAAACGATGTGGTGTAAGAAATTCGAGGCTCGAAAAGCTCGGTCAAGGGCTTCAGCCCCAGCTTCTCGACGACGATAA ATGGGCACAGTTGAGGTCTTTAATGGTGCTGATTTAAATCCTAATGCAAAAGAATGGAACCCTATTTACGATTGCGCTCCGGAGGAAGACCGATGCCTCTTTCTCACCTTCTCAAATGGCTTCCCCCTCACAGAGAACCAAATAGTCACCTTCTTCACCCGAAAATTCGGAGAGTGCATCGAAAGGGTGTACGTGCATTATCCGGAGGGAGGGAAACAACTGCCATTGTTTGGGAAGGTGGTGTTTGTTGCATCTTCAATTCCAGCAATCGTTCTTGGAGGAAAAGAAGAAGCTAAGTTTTCTATTGATAGCAAAACGATGTGGTGTAAGAAATTCGAGGCTCGAAAAGCTCGGTCAAGGGCTTCAGCCCCAGCTTCTCGACGACGATAA ATGGGCACAGTTGAGGTCTTTAATGGTGCTGATTTAAATCCTAATGCAAAAGAATGGAACCCTATTTACGATTGCGCTCCGGAGGAAGACCGATGCCTCTTTCTCACCTTCTCAAATGGCTTCCCCCTCACAGAGAACCAAATAGTCACCTTCTTCACCCGAAAATTCGGAGAGTGCATCGAAAGGGTGTACGTGCATTATCCGGAGGGAGGGAAACAACTGCCATTGTTTGGGAAGGTGGTGTTTGTTGCATCTTCAATTCCAGCAATCGTTCTTGGAGGAAAAGAAGAAGCTAAGTTTTCTATTGATAGCAAAACGATGTGGTGTAAGAAATTCGAGGCTCGAAAAGCTCGGTCAAGGGCTTCAGCCCCAGCTTCTCGACGACGATAA MGTVEVFNGADLNPNAKEWNPIYDCAPEEDRCLFLTFSNGFPLTENQIVTFFTRKFGECIERVYVHYPEGGKQLPLFGKVVFVASSIPAIVLGGKEEAKFSIDSKTMWCKKFEARKARSRASAPASRRR* Homology
BLAST of Chy6G105740 vs. ExPASy TrEMBL
Match: A0A5A7U0U8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold291G00510 PE=4 SV=1) HSP 1 Score: 265.4 bits (677), Expect = 1.3e-67 Identity = 127/129 (98.45%), Postives = 128/129 (99.22%), Query Frame = 0
BLAST of Chy6G105740 vs. ExPASy TrEMBL
Match: A0A0A0L3N4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G118030 PE=4 SV=1) HSP 1 Score: 242.3 bits (617), Expect = 1.1e-60 Identity = 119/129 (92.25%), Postives = 121/129 (93.80%), Query Frame = 0
BLAST of Chy6G105740 vs. ExPASy TrEMBL
Match: A0A6J1FZ16 (uncharacterized protein LOC111449194 OS=Cucurbita moschata OX=3662 GN=LOC111449194 PE=4 SV=1) HSP 1 Score: 209.1 bits (531), Expect = 1.1e-50 Identity = 95/121 (78.51%), Postives = 110/121 (90.91%), Query Frame = 0
BLAST of Chy6G105740 vs. ExPASy TrEMBL
Match: A0A6J1E9T6 (uncharacterized protein LOC111432088 OS=Cucurbita moschata OX=3662 GN=LOC111432088 PE=4 SV=1) HSP 1 Score: 202.2 bits (513), Expect = 1.3e-48 Identity = 93/112 (83.04%), Postives = 104/112 (92.86%), Query Frame = 0
BLAST of Chy6G105740 vs. ExPASy TrEMBL
Match: A0A6J1IWW8 (uncharacterized protein LOC111479214 OS=Cucurbita maxima OX=3661 GN=LOC111479214 PE=4 SV=1) HSP 1 Score: 198.7 bits (504), Expect = 1.4e-47 Identity = 91/112 (81.25%), Postives = 103/112 (91.96%), Query Frame = 0
BLAST of Chy6G105740 vs. NCBI nr
Match: KAA0048838.1 (hypothetical protein E6C27_scaffold171G00510 [Cucumis melo var. makuwa] >TYK20790.1 hypothetical protein E5676_scaffold291G00510 [Cucumis melo var. makuwa]) HSP 1 Score: 264 bits (675), Expect = 4.26e-89 Identity = 127/129 (98.45%), Postives = 128/129 (99.22%), Query Frame = 0
BLAST of Chy6G105740 vs. NCBI nr
Match: KAE8650218.1 (hypothetical protein Csa_011746 [Cucumis sativus]) HSP 1 Score: 264 bits (674), Expect = 6.05e-89 Identity = 126/129 (97.67%), Postives = 128/129 (99.22%), Query Frame = 0
BLAST of Chy6G105740 vs. NCBI nr
Match: XP_023540960.1 (uncharacterized protein LOC111801189 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 209 bits (532), Expect = 2.18e-67 Identity = 96/121 (79.34%), Postives = 111/121 (91.74%), Query Frame = 0
BLAST of Chy6G105740 vs. NCBI nr
Match: XP_022944781.1 (uncharacterized protein LOC111449194 [Cucurbita moschata] >KAG6597035.1 hypothetical protein SDJN03_10215, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 207 bits (527), Expect = 1.26e-66 Identity = 95/121 (78.51%), Postives = 110/121 (90.91%), Query Frame = 0
BLAST of Chy6G105740 vs. NCBI nr
Match: XP_022924654.1 (uncharacterized protein LOC111432088 [Cucurbita moschata] >KAG6582708.1 hypothetical protein SDJN03_22710, partial [Cucurbita argyrosperma subsp. sororia] >KAG7020697.1 hypothetical protein SDJN02_17384, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 201 bits (510), Expect = 6.58e-64 Identity = 93/112 (83.04%), Postives = 104/112 (92.86%), Query Frame = 0
BLAST of Chy6G105740 vs. TAIR 10
Match: AT5G13620.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G49290.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 79.0 bits (193), Expect = 3.2e-15 Identity = 40/100 (40.00%), Postives = 62/100 (62.00%), Query Frame = 0
BLAST of Chy6G105740 vs. TAIR 10
Match: AT1G64870.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G45200.1); Has 99 Blast hits to 91 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 99; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 69.7 bits (169), Expect = 2.0e-12 Identity = 39/112 (34.82%), Postives = 63/112 (56.25%), Query Frame = 0
BLAST of Chy6G105740 vs. TAIR 10
Match: AT1G49290.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G13620.1); Has 99 Blast hits to 93 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 97; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 69.7 bits (169), Expect = 2.0e-12 Identity = 34/86 (39.53%), Postives = 55/86 (63.95%), Query Frame = 0
BLAST of Chy6G105740 vs. TAIR 10
Match: AT3G45200.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G64870.1); Has 95 Blast hits to 91 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 95; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 63.5 bits (153), Expect = 1.4e-10 Identity = 36/110 (32.73%), Postives = 61/110 (55.45%), Query Frame = 0
BLAST of Chy6G105740 vs. TAIR 10
Match: AT5G11220.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G64870.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 62.4 bits (150), Expect = 3.1e-10 Identity = 30/98 (30.61%), Postives = 57/98 (58.16%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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