Chy5G105020 (gene) Cucumber (hystrix) v1

Overview


Name	Chy5G105020
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Ribosomal protein L18ae family
Location	chrH05: 18385879 .. 18387605 (+)
RNA-Seq Expression	Chy5G105020
Synteny	Chy5G105020

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGTCTAGTTTTGGTCAAGCTAGGTTACCTATTCATCTGACGGCTTTTGGAAGATTGAAAAGTTCCATAAGGTTGTTGTGCTCAACTGAACTAGTGTTTTATTAACATGAGGTTTAATGAACTAATTGGTATAAGAATATTGGATTGTTTAGAGCTATTTGGAATGTAAATACCAAACTTAGGTAAATTTTCAAGCCAGTTTCAATCTTCTGTTTGCCGCATTTGAAGAATATATAGCTGTCTTGTTGGGTGTCTTTTGATTATTTCCTTCAGACTTCCGAGTAGATTTTGATCTTTGACACAGGTTAACAAAGTGGATACTGCGAATTCGAAGAGTTCATCCTTCCATAAACACCGGCTTCAGCATGGATCCAAGTAACTTAATTCTTCTTATAACTTGGGTTGCTCATGATATCACTTACGGTTGGGGGCATAACCTAAAATTTAAAAAGAAGAAAAGAAAAGAAAAAGGCATGACTATGTATATTGGGTGCATTAGATGATTTTATTTGTGAGTTTGTAGCATGGTTCTTACTTAAGTAATTTATTTGATCTTGAGAATCTTTAGGTGTCTTTGACATCCATACATGCCTATACTCATTCTTATGCTTTCACTGCATGGTTATACTTTTTATTGAAGAATCTGGCCACATTCAGAGTTTTAAGCTTGTTGATTTAGTGTCCGTCCTTTTATGATACACGTTTGCGGTCTTCGTCAAACCAATAATACACATCGAACTGTAAATAGTTTTTACGAAATAGTTTGAACGATTACTTGAGTTGTGAACATGTTTTGGCGATGTTACAGATGGAAAAATGGACCAGACGGTGCAACTGGTGAAATCGGTCTCTGATAAGCATCTTGATCTTTTGAGACCATCTGCCCGAATTTGTTCAATATTCAAAGGTAAGTCGGGAATAAAAAGAGAACCATTTATGATATATGATGCATATATTATTACCTTGTATTGGTGGCTCTAGAATGAAATTATTTTTCGTAAAAAAAAAGGGAATGAAATTAGCTGAACCATTTTCAAAATGCCCTTATATCATAATGGACGCATTGCGACGCCACATTACTGTGGAATTTCTGGAATCGATAGGGGTTCGTTTTTTATTGCTCCATTATGAGGGAAGGTCGAGATGATACTTAATAATATGGTCTTGATGGTAGGGTTTTATCACTCCGGTAGTCCATTTTCTTTGTACTGACCTATGAATTACAGAAATCTCTTAAGATTTTCATGTCGTTTTCAATTGGAGATGTTGATTACGAGTGTTTTTTGCTTGTATATTCATCTATGCTCAAAATGGTTGATAATACACCTAGGCCAAGGAAAAGATGCTCCAGACCACATAAGGAGCAAATACACACTTCTCAGAGATGTAGAGGATGCTCAAGTAGGGCTATATGACAAGCCTCTCCCGTGTTTTGGCTGCGGCATAGGATGGTTTTCGTGAGTATTGTGAAACTCTCTCGTATACTTACATTTCATGGAACGTCTATCTTTGCCTACATCCAGTTTTTCGAGTTTTCTAATCTTACCTTTGTATCTGTCTTTCCATTCAGTTTCCTCCTGGGGTTTTTTTTCCCACTAATGTGGTACTATGCCACGATTCTCTACTTCTGGAATGCTCGCAGAGATCCAAGGGAACGAGCTGGATTAGCTGCGTCTGCCATTGCTGTAAGTGACTCCTTCGTTTCTCCCAGTCCCTACTCATAA

mRNA sequence

ATGAAGTCTAGTTTTGGTCAAGCTAGGTTACCTATTCATCTGACGGCTTTTGGAAGATTGAAAAGTTCCATAAGGTTAACAAAGTGGATACTGCGAATTCGAAGAGTTCATCCTTCCATAAACACCGGCTTCAGCATGGATCCAAATGGAAAAATGGACCAGACGGTGCAACTGGTGAAATCGGTCTCTGATAAGCATCTTGATCTTTTGAGACCATCTGCCCGAATTTGTTCAATATTCAAAGGCCAAGGAAAAGATGCTCCAGACCACATAAGGAGCAAATACACACTTCTCAGAGATGTAGAGGATGCTCAAGTAGGGCTATATGACAAGCCTCTCCCGTGTTTTGGCTGCGGCATAGGATGGTTTTCTTTCCTCCTGGGGTTTTTTTTCCCACTAATGTGGTACTATGCCACGATTCTCTACTTCTGGAATGCTCGCAGAGATCCAAGGGAACGAGCTGGATTAGCTGCGTCTGCCATTGCTGTAAGTGACTCCTTCGTTTCTCCCAGTCCCTACTCATAA

Coding sequence (CDS)

ATGAAGTCTAGTTTTGGTCAAGCTAGGTTACCTATTCATCTGACGGCTTTTGGAAGATTGAAAAGTTCCATAAGGTTAACAAAGTGGATACTGCGAATTCGAAGAGTTCATCCTTCCATAAACACCGGCTTCAGCATGGATCCAAATGGAAAAATGGACCAGACGGTGCAACTGGTGAAATCGGTCTCTGATAAGCATCTTGATCTTTTGAGACCATCTGCCCGAATTTGTTCAATATTCAAAGGCCAAGGAAAAGATGCTCCAGACCACATAAGGAGCAAATACACACTTCTCAGAGATGTAGAGGATGCTCAAGTAGGGCTATATGACAAGCCTCTCCCGTGTTTTGGCTGCGGCATAGGATGGTTTTCTTTCCTCCTGGGGTTTTTTTTCCCACTAATGTGGTACTATGCCACGATTCTCTACTTCTGGAATGCTCGCAGAGATCCAAGGGAACGAGCTGGATTAGCTGCGTCTGCCATTGCTGTAAGTGACTCCTTCGTTTCTCCCAGTCCCTACTCATAA

Protein sequence

MKSSFGQARLPIHLTAFGRLKSSIRLTKWILRIRRVHPSINTGFSMDPNGKMDQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDAPDHIRSKYTLLRDVEDAQVGLYDKPLPCFGCGIGWFSFLLGFFFPLMWYYATILYFWNARRDPRERAGLAASAIAVSDSFVSPSPYS*

Homology

[Close]

BLAST of Chy5G105020 vs. ExPASy TrEMBL
Match: A0A0A0LKM2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G000300 PE=4 SV=1)

HSP 1 Score: 325.5 bits (833), Expect = 1.4e-85
Identity = 156/160 (97.50%), Postives = 157/160 (98.12%), Query Frame = 0


Query: 3   SSFGQARLPIHLTAFGRLKSSIRLTKWILRIRRVHPSINTGFSMDPNGKMDQTVQLVKSV 62
           SSFGQARLPIHLTAFGRLKSSIR TKWILRI RVH SINTGFSMDPNGKMDQTVQLVKSV
Sbjct: 19  SSFGQARLPIHLTAFGRLKSSIRFTKWILRILRVHSSINTGFSMDPNGKMDQTVQLVKSV 78

Query: 63  SDKHLDLLRPSARICSIFKGQGKDAPDHIRSKYTLLRDVEDAQVGLYDKPLPCFGCGIGW 122
           SDKHLDLLRPSARICSIFKGQGKDAPDHIRSKYTLLRDVEDAQVGLYDKPLPCFGCGIGW
Sbjct: 79  SDKHLDLLRPSARICSIFKGQGKDAPDHIRSKYTLLRDVEDAQVGLYDKPLPCFGCGIGW 138

Query: 123 FSFLLGFFFPLMWYYATILYFWNARRDPRERAGLAASAIA 163
           FSFLLGFFFPL+WYYATILYFWNARRDPRERAGLAASAIA
Sbjct: 139 FSFLLGFFFPLLWYYATILYFWNARRDPRERAGLAASAIA 178

[Close]

BLAST of Chy5G105020 vs. ExPASy TrEMBL
Match: A0A1S3CAZ9 (uncharacterized protein LOC103498658 OS=Cucumis melo OX=3656 GN=LOC103498658 PE=4 SV=1)

HSP 1 Score: 247.7 bits (631), Expect = 3.7e-62
Identity = 116/117 (99.15%), Postives = 117/117 (100.00%), Query Frame = 0


Query: 46  MDPNGKMDQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDAPDHIRSKYTLLRDVEDAQ 105
           MDPNGKMDQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDAPDHIRSKYTLLRDVED+Q
Sbjct: 1   MDPNGKMDQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDAPDHIRSKYTLLRDVEDSQ 60

Query: 106 VGLYDKPLPCFGCGIGWFSFLLGFFFPLMWYYATILYFWNARRDPRERAGLAASAIA 163
           VGLYDKPLPCFGCGIGWFSFLLGFFFPLMWYYATILYFWNARRDPRERAGLAASAIA
Sbjct: 61  VGLYDKPLPCFGCGIGWFSFLLGFFFPLMWYYATILYFWNARRDPRERAGLAASAIA 117

[Close]

BLAST of Chy5G105020 vs. ExPASy TrEMBL
Match: A0A5D3CGZ6 (60S ribosomal protein L18a-1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold332G001100 PE=4 SV=1)

HSP 1 Score: 247.7 bits (631), Expect = 3.7e-62
Identity = 116/117 (99.15%), Postives = 117/117 (100.00%), Query Frame = 0


Query: 46  MDPNGKMDQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDAPDHIRSKYTLLRDVEDAQ 105
           MDPNGKMDQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDAPDHIRSKYTLLRDVED+Q
Sbjct: 1   MDPNGKMDQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDAPDHIRSKYTLLRDVEDSQ 60

Query: 106 VGLYDKPLPCFGCGIGWFSFLLGFFFPLMWYYATILYFWNARRDPRERAGLAASAIA 163
           VGLYDKPLPCFGCGIGWFSFLLGFFFPLMWYYATILYFWNARRDPRERAGLAASAIA
Sbjct: 61  VGLYDKPLPCFGCGIGWFSFLLGFFFPLMWYYATILYFWNARRDPRERAGLAASAIA 117

[Close]

BLAST of Chy5G105020 vs. ExPASy TrEMBL
Match: A0A6J1G4J6 (uncharacterized protein LOC111450686 OS=Cucurbita moschata OX=3662 GN=LOC111450686 PE=4 SV=1)

HSP 1 Score: 231.5 bits (589), Expect = 2.7e-57
Identity = 107/117 (91.45%), Postives = 113/117 (96.58%), Query Frame = 0


Query: 46  MDPNGKMDQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDAPDHIRSKYTLLRDVEDAQ 105
           MDPN K+D TVQLVKSVSD+HLDLLRPSARICSIFKGQGKDA DHIRSKYTLLRDVED+Q
Sbjct: 1   MDPNAKIDPTVQLVKSVSDRHLDLLRPSARICSIFKGQGKDASDHIRSKYTLLRDVEDSQ 60

Query: 106 VGLYDKPLPCFGCGIGWFSFLLGFFFPLMWYYATILYFWNARRDPRERAGLAASAIA 163
           VGLYDKPLPCFGCGIGWFSFLLGF FP+MWYYATILYFWN+RRDPRERAGLAAS+IA
Sbjct: 61  VGLYDKPLPCFGCGIGWFSFLLGFLFPVMWYYATILYFWNSRRDPRERAGLAASSIA 117

[Close]

BLAST of Chy5G105020 vs. ExPASy TrEMBL
Match: A0A6J1KAT7 (uncharacterized protein LOC111493795 OS=Cucurbita maxima OX=3661 GN=LOC111493795 PE=4 SV=1)

HSP 1 Score: 230.3 bits (586), Expect = 6.1e-57
Identity = 106/117 (90.60%), Postives = 113/117 (96.58%), Query Frame = 0


Query: 46  MDPNGKMDQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDAPDHIRSKYTLLRDVEDAQ 105
           MDPN K+D TVQLVKSVSD+HLDLLRP+ARICSIFKGQGKDA DHIRSKYTLLRDVED+Q
Sbjct: 1   MDPNAKIDPTVQLVKSVSDRHLDLLRPTARICSIFKGQGKDASDHIRSKYTLLRDVEDSQ 60

Query: 106 VGLYDKPLPCFGCGIGWFSFLLGFFFPLMWYYATILYFWNARRDPRERAGLAASAIA 163
           VGLYDKPLPCFGCGIGWFSFLLGF FP+MWYYATILYFWN+RRDPRERAGLAAS+IA
Sbjct: 61  VGLYDKPLPCFGCGIGWFSFLLGFLFPVMWYYATILYFWNSRRDPRERAGLAASSIA 117

[Close]

BLAST of Chy5G105020 vs. NCBI nr
Match: XP_011648592.1 (uncharacterized protein LOC101207093 isoform X1 [Cucumis sativus])

HSP 1 Score: 328 bits (841), Expect = 6.99e-113
Identity = 158/163 (96.93%), Postives = 159/163 (97.55%), Query Frame = 0


Query: 1   MKSSFGQARLPIHLTAFGRLKSSIRLTKWILRIRRVHPSINTGFSMDPNGKMDQTVQLVK 60
           MKSSFGQARLPIHLTAFGRLKSSIR TKWILRI RVH SINTGFSMDPNGKMDQTVQLVK
Sbjct: 1   MKSSFGQARLPIHLTAFGRLKSSIRFTKWILRILRVHSSINTGFSMDPNGKMDQTVQLVK 60

Query: 61  SVSDKHLDLLRPSARICSIFKGQGKDAPDHIRSKYTLLRDVEDAQVGLYDKPLPCFGCGI 120
           SVSDKHLDLLRPSARICSIFKGQGKDAPDHIRSKYTLLRDVEDAQVGLYDKPLPCFGCGI
Sbjct: 61  SVSDKHLDLLRPSARICSIFKGQGKDAPDHIRSKYTLLRDVEDAQVGLYDKPLPCFGCGI 120

Query: 121 GWFSFLLGFFFPLMWYYATILYFWNARRDPRERAGLAASAIAV 163
           GWFSFLLGFFFPL+WYYATILYFWNARRDPRERAGLAASAIA 
Sbjct: 121 GWFSFLLGFFFPLLWYYATILYFWNARRDPRERAGLAASAIAA 163

[Close]

BLAST of Chy5G105020 vs. NCBI nr
Match: XP_008459564.1 (PREDICTED: uncharacterized protein LOC103498658 [Cucumis melo] >XP_008459572.1 PREDICTED: uncharacterized protein LOC103498658 [Cucumis melo] >KAA0061479.1 60S ribosomal protein L18a-1 [Cucumis melo var. makuwa] >TYK10795.1 60S ribosomal protein L18a-1 [Cucumis melo var. makuwa])

HSP 1 Score: 246 bits (629), Expect = 3.09e-81
Identity = 116/118 (98.31%), Postives = 117/118 (99.15%), Query Frame = 0


Query: 46  MDPNGKMDQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDAPDHIRSKYTLLRDVEDAQ 105
           MDPNGKMDQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDAPDHIRSKYTLLRDVED+Q
Sbjct: 1   MDPNGKMDQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDAPDHIRSKYTLLRDVEDSQ 60

Query: 106 VGLYDKPLPCFGCGIGWFSFLLGFFFPLMWYYATILYFWNARRDPRERAGLAASAIAV 163
           VGLYDKPLPCFGCGIGWFSFLLGFFFPLMWYYATILYFWNARRDPRERAGLAASAIA 
Sbjct: 61  VGLYDKPLPCFGCGIGWFSFLLGFFFPLMWYYATILYFWNARRDPRERAGLAASAIAA 118

[Close]

BLAST of Chy5G105020 vs. NCBI nr
Match: XP_004141063.1 (uncharacterized protein LOC101207093 isoform X2 [Cucumis sativus] >KGN60545.2 hypothetical protein Csa_019181 [Cucumis sativus])

HSP 1 Score: 246 bits (629), Expect = 3.09e-81
Identity = 116/118 (98.31%), Postives = 117/118 (99.15%), Query Frame = 0


Query: 46  MDPNGKMDQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDAPDHIRSKYTLLRDVEDAQ 105
           MDPNGKMDQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDAPDHIRSKYTLLRDVEDAQ
Sbjct: 1   MDPNGKMDQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDAPDHIRSKYTLLRDVEDAQ 60

Query: 106 VGLYDKPLPCFGCGIGWFSFLLGFFFPLMWYYATILYFWNARRDPRERAGLAASAIAV 163
           VGLYDKPLPCFGCGIGWFSFLLGFFFPL+WYYATILYFWNARRDPRERAGLAASAIA 
Sbjct: 61  VGLYDKPLPCFGCGIGWFSFLLGFFFPLLWYYATILYFWNARRDPRERAGLAASAIAA 118

[Close]

BLAST of Chy5G105020 vs. NCBI nr
Match: XP_038889607.1 (uncharacterized protein LOC120079478 [Benincasa hispida])

HSP 1 Score: 242 bits (617), Expect = 2.08e-79
Identity = 114/118 (96.61%), Postives = 116/118 (98.31%), Query Frame = 0


Query: 46  MDPNGKMDQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDAPDHIRSKYTLLRDVEDAQ 105
           MDPNGK+DQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDA DHIRSKYTLLRDVED+Q
Sbjct: 1   MDPNGKIDQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDASDHIRSKYTLLRDVEDSQ 60

Query: 106 VGLYDKPLPCFGCGIGWFSFLLGFFFPLMWYYATILYFWNARRDPRERAGLAASAIAV 163
           VGLYDKPLPCFGCGIGWFSFLLGFFFPLMWYYATILYFWNARRDPRERAGLAASAIA 
Sbjct: 61  VGLYDKPLPCFGCGIGWFSFLLGFFFPLMWYYATILYFWNARRDPRERAGLAASAIAA 118

[Close]

BLAST of Chy5G105020 vs. NCBI nr
Match: XP_022946692.1 (uncharacterized protein LOC111450686 [Cucurbita moschata] >XP_022946693.1 uncharacterized protein LOC111450686 [Cucurbita moschata])

HSP 1 Score: 230 bits (587), Expect = 7.99e-75
Identity = 107/118 (90.68%), Postives = 113/118 (95.76%), Query Frame = 0


Query: 46  MDPNGKMDQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDAPDHIRSKYTLLRDVEDAQ 105
           MDPN K+D TVQLVKSVSD+HLDLLRPSARICSIFKGQGKDA DHIRSKYTLLRDVED+Q
Sbjct: 1   MDPNAKIDPTVQLVKSVSDRHLDLLRPSARICSIFKGQGKDASDHIRSKYTLLRDVEDSQ 60

Query: 106 VGLYDKPLPCFGCGIGWFSFLLGFFFPLMWYYATILYFWNARRDPRERAGLAASAIAV 163
           VGLYDKPLPCFGCGIGWFSFLLGF FP+MWYYATILYFWN+RRDPRERAGLAAS+IA 
Sbjct: 61  VGLYDKPLPCFGCGIGWFSFLLGFLFPVMWYYATILYFWNSRRDPRERAGLAASSIAA 118

[Close]

BLAST of Chy5G105020 vs. TAIR 10
Match: AT4G26060.1 (Ribosomal protein L18ae family )

HSP 1 Score: 140.2 bits (352), Expect = 1.6e-33
Identity = 69/110 (62.73%), Postives = 85/110 (77.27%), Query Frame = 0


Query: 53  DQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDAPDHIRSKYTLLRDVEDAQVGLYDKP 112
           D + +LVKSV+DKH  L+RP A+  S      KDA    + +YTL++DV++ + G+YDKP
Sbjct: 10  DGSAELVKSVADKHAGLVRPVAKYYSAV----KDAMVCGKGRYTLVKDVDEVENGVYDKP 69

Query: 113 LPCFGCGIGWFSFLLGFFFPLMWYYATILYFWN-ARRDPRERAGLAASAI 162
           LPCFGCGIGWFSFLLGF FP +WYYAT+LYF N  R+DPRERAGLAASAI
Sbjct: 70  LPCFGCGIGWFSFLLGFVFPFLWYYATLLYFGNYYRKDPRERAGLAASAI 115

[Close]

BLAST of Chy5G105020 vs. TAIR 10
Match: AT5G57060.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: defense response to Gram-negative bacterium, cytolysis; LOCATED IN: integral to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Channel forming colicin, C-terminal cytotoxic (InterPro:IPR000293); BEST Arabidopsis thaliana protein match is: Ribosomal protein L18ae family (TAIR:AT4G26060.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 134.4 bits (337), Expect = 8.7e-32
Identity = 67/120 (55.83%), Postives = 84/120 (70.00%), Query Frame = 0


Query: 46  MDPNGKM---DQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDAPDHIRSKYTLLRDVE 105
           MD N K    +   +LVK ++D+H  L++ ++R  S      KDA    + +YTL++DV+
Sbjct: 1   MDENSKFVSGNGRTELVKFIADRHAKLMKQASRHYSAI----KDAMARGKKRYTLVKDVD 60

Query: 106 DAQVGLYDKPLPCFGCGIGWFSFLLGFFFPLMWYYATILYFWN-ARRDPRERAGLAASAI 162
           D + G YDKPLPCFGCGIGWFSFLLGF FP +WYYA  LYF N  R+DPRERAGLAASAI
Sbjct: 61  DMETGAYDKPLPCFGCGIGWFSFLLGFMFPFLWYYAAFLYFGNYYRKDPRERAGLAASAI 116

[Close]

BLAST of Chy5G105020 vs. TAIR 10
Match: AT5G57060.2 (BEST Arabidopsis thaliana protein match is: Ribosomal protein L18ae family (TAIR:AT4G26060.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 120.9 bits (302), Expect = 9.9e-28
Identity = 55/78 (70.51%), Postives = 63/78 (80.77%), Query Frame = 0


Query: 85  KDAPDHIRSKYTLLRDVEDAQVGLYDKPLPCFGCGIGWFSFLLGFFFPLMWYYATILYFW 144
           KDA    + +YTL++DV+D + G YDKPLPCFGCGIGWFSFLLGF FP +WYYA  LYF 
Sbjct: 12  KDAMARGKKRYTLVKDVDDMETGAYDKPLPCFGCGIGWFSFLLGFMFPFLWYYAAFLYFG 71

Query: 145 N-ARRDPRERAGLAASAI 162
           N  R+DPRERAGLAASAI
Sbjct: 72  NYYRKDPRERAGLAASAI 89

[Close]

BLAST of Chy5G105020 vs. TAIR 10
Match: AT1G54217.2 (Ribosomal protein L18ae family )

HSP 1 Score: 99.0 bits (245), Expect = 4.0e-21
Identity = 49/79 (62.03%), Postives = 58/79 (73.42%), Query Frame = 0


Query: 86  DAPDHIRSKYTLLR-DVEDAQVGLYDKPLPCFGCGIGWFSFLLGFFFPLMWYYATILYFW 145
           D  +  + KY L+R D ED+++G + KPLPCFG GIGWFSFLLGF FP  WY AT LY  
Sbjct: 5   DLEEQKKGKYVLIRDDAEDSELGQFYKPLPCFGFGIGWFSFLLGFVFPFAWYVATFLYLI 64

Query: 146 N-ARRDPRERAGLAASAIA 163
           +   RDPRER+GLAASAIA
Sbjct: 65  SYYHRDPRERSGLAASAIA 83

[Close]

BLAST of Chy5G105020 vs. TAIR 10
Match: AT1G54217.1 (Ribosomal protein L18ae family )

HSP 1 Score: 97.4 bits (241), Expect = 1.2e-20
Identity = 48/73 (65.75%), Postives = 56/73 (76.71%), Query Frame = 0


Query: 92  RSKYTLLR-DVEDAQVGLYDKPLPCFGCGIGWFSFLLGFFFPLMWYYATILYFWN-ARRD 151
           + KY L+R D ED+++G + KPLPCFG GIGWFSFLLGF FP  WY AT LY  +   RD
Sbjct: 10  KGKYVLIRDDAEDSELGQFYKPLPCFGFGIGWFSFLLGFVFPFAWYVATFLYLISYYHRD 69

Query: 152 PRERAGLAASAIA 163
           PRER+GLAASAIA
Sbjct: 70  PRERSGLAASAIA 82

The following BLAST results are available for this feature:

BLAST of Chy5G105020 vs.


Match Name	E-value	Identity	Description

BLAST of Chy5G105020 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LKM2	1.4e-85	97.50	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G000300 PE=4 SV=1	[more]
A0A1S3CAZ9	3.7e-62	99.15	uncharacterized protein LOC103498658 OS=Cucumis melo OX=3656 GN=LOC103498658 PE=...	[more]
A0A5D3CGZ6	3.7e-62	99.15	60S ribosomal protein L18a-1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A6J1G4J6	2.7e-57	91.45	uncharacterized protein LOC111450686 OS=Cucurbita moschata OX=3662 GN=LOC1114506...	[more]
A0A6J1KAT7	6.1e-57	90.60	uncharacterized protein LOC111493795 OS=Cucurbita maxima OX=3661 GN=LOC111493795...	[more]

BLAST of Chy5G105020 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011648592.1	6.99e-113	96.93	uncharacterized protein LOC101207093 isoform X1 [Cucumis sativus]	[more]
XP_008459564.1	3.09e-81	98.31	PREDICTED: uncharacterized protein LOC103498658 [Cucumis melo] >XP_008459572.1 P...	[more]
XP_004141063.1	3.09e-81	98.31	uncharacterized protein LOC101207093 isoform X2 [Cucumis sativus] >KGN60545.2 hy...	[more]
XP_038889607.1	2.08e-79	96.61	uncharacterized protein LOC120079478 [Benincasa hispida]	[more]
XP_022946692.1	7.99e-75	90.68	uncharacterized protein LOC111450686 [Cucurbita moschata] >XP_022946693.1 unchar...	[more]

BLAST of Chy5G105020 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G26060.1	1.6e-33	62.73	Ribosomal protein L18ae family	[more]
AT5G57060.1	8.7e-32	55.83	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: defense response to Gram-...	[more]
AT5G57060.2	9.9e-28	70.51	BEST Arabidopsis thaliana protein match is: Ribosomal protein L18ae family (TAIR...	[more]
AT1G54217.2	4.0e-21	62.03	Ribosomal protein L18ae family	[more]
AT1G54217.1	1.2e-20	65.75	Ribosomal protein L18ae family	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR46666:SF7	SUBFAMILY NOT NAMED	coord: 54..166
None	No IPR available	PANTHER	PTHR46666	60S RIBOSOMAL L18A-LIKE PROTEIN	coord: 54..166

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy5G105020.1	Chy5G105020.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane