Chy5G103830 (gene) Cucumber (hystrix) v1

Overview


Name	Chy5G103830
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Protein sickie like
Location	chrH05: 17509133 .. 17511011 (+)
RNA-Seq Expression	Chy5G103830
Synteny	Chy5G103830

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCCCGCCGCCCGTCGATCCCAGTTCTCGGTCAGTCTTTCAATTACTCTTCTCTGTTTCTTCGTAGATGTCCTCGCTTCATTTTCATTCTCGTTTGTTTCGATTTGCTGAATCTTCCCATGTGAAAATTTTCTCGTTCTTTTGTTCTGAAAAGGGAGGCTTTTCCGAGGAAGCAATCGGCCCCATACAAGTTCTTGGTTCCTCTCGTTTACGCCCCTGTTCTTCCTCTCAGTAAGTACAATTTTCTGAGGTTTTCGTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGCATTTCTGGTTATTTTTTCATCTGAGTTTTGTTCGAACGAGATTCTAAATTTGTGGGACTGTTTTGTTTTGTCTTTTTCAGTTAGAATTGCGCTGCGGAAAAACCCTGTTGTGAGGGATCGGCTGTTCACGGCGGTTTTGGCTGGTGCTTTTGCCCATGGCTTTTACTTGGTGTATCCTCTTAACCCTTATATTTACTTTTATCATTGCCCCTATCATATTGAATTCACATTCTTGAATCTTGCGATTTCCATGTTTCTCTGTTCATTTGTTGATGATATGCCTCTGCTGTTCTGTAAAATTATCTTCTTATCTAAGAATTTTTACGTTTGGCCCACCATTGATTGCTATGTATTGTAGAACCGAATTGGTCACGAGGAATAGGGGATCTGGCTACATTTTGGTGGGGTATTTAGACTAATGTGGAGTTGGAAATTAACGTAGTCAAAGTTCAAAAGTTTCCAGAGTTGTTGATTGATCTGTTAACTACAAAAGTAGTACAGAAATTGTTGATTTTGATTTCTCTGAGAAATGTGATTTCTCATCATTCTTAGAGTATGTGAGTATTACGGGCCCTGGGAAAAGGCACAGATGTAAATTACTACTTGATTAACGTCTAGCCGATTAGTCATACAAGTGCAAATCTGAGGAGGAATGAAATCACTATGACTTGGCCTACTCGTCGAAAAGAACCATACAAATAATAAAGAGCTTAGAGGGAATAAGATCAAGTCACCTTAGTCACCTACCTAATATTTTATATCCAACAAGTTACCTTTTGGTGGAACCAAATGTAGTTGGGTTAAACAGTTGACTTGTCAGAATAGTCCAAATAAGAGCAAGCGAGCTTGGACTCTCATGTATGTGTGTGTCCATTCATAAGGTAGGAGGTTAGAGTTTAATTATGGGGAATTATGTGCTACTTCATGAGTGACATTCATAGGTTGCTCCGTCAATTTGCTGGGTTTCTAAATGTTGTTGAGCAATTGACCATGTGATCAAGACTTTGACACAGGTGATGTCTCTTGAGATTTGCTGCTCGTTTTAAAGATAAACTAGCAATTTCCGAGGTTATTGCTTATTGTCAAAGAGTAACATTATGGATTCAATTTTGAAGTCCTCTCTACCATAGAAAATTGAGTTATGTTCTTAGACAAAACTTGTCCACGTTTGTATTCTCACGTTCAATTCCTGCCTGTAACTTAGAAATCCCTCACAGTTGAGATCTAGAAAAGTATTATTTGAAGCCTTGTACATTTGGTTCTTGCAAACTCGTTGGCCAACAAGTTCTATGGGAATGCTCGTAAATATTCGAGCATGTCCTTGCTTGCAATGAAACTTTTCTCAATGACATAATGTAGTAGGTAGTAGTATATATTGTGCGATTGATGTTCTCATTGCTATTGCTTGATTGAATTCCTCTTCACTTTATTCATGTTTGAGCTTAAACTTTGCTCAAACATGAGGTGGATTTTTTTTAATGGTTTTTTTAACTTTTAAAATATAATTAAATTGTTCAATTACAAAATTGAGTTGTGTTCCTTGATGAGTATGATCAGAACTGATATCTACGATGCTGAGAGCAAGTAA

mRNA sequence

ATGGCCCCGCCGCCCGTCGATCCCAGTTCTCGGGAGGCTTTTCCGAGGAAGCAATCGGCCCCATACAAGTTCTTGGTTCCTCTCGTTTACGCCCCTGTTCTTCCTCTCATTAGAATTGCGCTGCGGAAAAACCCTGTTGTGAGGGATCGGCTGTTCACGGCGGTTTTGGCTGGTGCTTTTGCCCATGGCTTTTACTTGGTAACTGATATCTACGATGCTGAGAGCAAGTAA

Coding sequence (CDS)

ATGGCCCCGCCGCCCGTCGATCCCAGTTCTCGGGAGGCTTTTCCGAGGAAGCAATCGGCCCCATACAAGTTCTTGGTTCCTCTCGTTTACGCCCCTGTTCTTCCTCTCATTAGAATTGCGCTGCGGAAAAACCCTGTTGTGAGGGATCGGCTGTTCACGGCGGTTTTGGCTGGTGCTTTTGCCCATGGCTTTTACTTGGTAACTGATATCTACGATGCTGAGAGCAAGTAA

Protein sequence

MAPPPVDPSSREAFPRKQSAPYKFLVPLVYAPVLPLIRIALRKNPVVRDRLFTAVLAGAFAHGFYLVTDIYDAESK*

Homology

[Close]

BLAST of Chy5G103830 vs. ExPASy TrEMBL
Match: A0A0A0LF45 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G006000 PE=4 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 7.1e-34
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 0


Query: 1  MAPPPVDPSSREAFPRKQSAPYKFLVPLVYAPVLPLIRIALRKNPVVRDRLFTAVLAGAF 60
          MAPPPVDPSSREAFPRKQSAPYKFLVPLVYAPVLPLIRIALRKNPVVRDRLFTAVLAGAF
Sbjct: 1  MAPPPVDPSSREAFPRKQSAPYKFLVPLVYAPVLPLIRIALRKNPVVRDRLFTAVLAGAF 60

Query: 61 AHGFYLVTDIYDAESK 77
          AHGFYLVTDIYDAESK
Sbjct: 61 AHGFYLVTDIYDAESK 76

[Close]

BLAST of Chy5G103830 vs. ExPASy TrEMBL
Match: A0A1S3C7Y6 (uncharacterized protein LOC103497503 OS=Cucumis melo OX=3656 GN=LOC103497503 PE=4 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 1.7e-32
Identity = 74/76 (97.37%), Postives = 75/76 (98.68%), Query Frame = 0


Query: 1  MAPPPVDPSSREAFPRKQSAPYKFLVPLVYAPVLPLIRIALRKNPVVRDRLFTAVLAGAF 60
          MA PPVDPSSREAFPRKQSAP+KFLVPLVYAPVLPLIRIALRKNPVVRDRLFTAVLAGAF
Sbjct: 1  MASPPVDPSSREAFPRKQSAPFKFLVPLVYAPVLPLIRIALRKNPVVRDRLFTAVLAGAF 60

Query: 61 AHGFYLVTDIYDAESK 77
          AHGFYLVTDIYDAESK
Sbjct: 61 AHGFYLVTDIYDAESK 76

[Close]

BLAST of Chy5G103830 vs. ExPASy TrEMBL
Match: A0A6J1HSI9 (uncharacterized protein LOC111465738 OS=Cucurbita maxima OX=3661 GN=LOC111465738 PE=4 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 3.1e-29
Identity = 66/72 (91.67%), Postives = 71/72 (98.61%), Query Frame = 0


Query: 5  PVDPSSREAFPRKQSAPYKFLVPLVYAPVLPLIRIALRKNPVVRDRLFTAVLAGAFAHGF 64
          P DP+SREAFP+K+SAP+KFLVPL+YAPVLPLIRIALRKNPVVRDRLFTAVLAGAFAHGF
Sbjct: 4  PYDPTSREAFPKKKSAPFKFLVPLIYAPVLPLIRIALRKNPVVRDRLFTAVLAGAFAHGF 63

Query: 65 YLVTDIYDAESK 77
          YLVTDIYDAESK
Sbjct: 64 YLVTDIYDAESK 75

[Close]

BLAST of Chy5G103830 vs. ExPASy TrEMBL
Match: A0A6J1FDN8 (uncharacterized protein LOC111444436 OS=Cucurbita moschata OX=3662 GN=LOC111444436 PE=4 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 3.1e-29
Identity = 66/72 (91.67%), Postives = 71/72 (98.61%), Query Frame = 0


Query: 5   PVDPSSREAFPRKQSAPYKFLVPLVYAPVLPLIRIALRKNPVVRDRLFTAVLAGAFAHGF 64
           P DP+SREAFP+K+SAP+KFLVPL+YAPVLPLIRIALRKNPVVRDRLFTAVLAGAFAHGF
Sbjct: 82  PYDPTSREAFPKKKSAPFKFLVPLIYAPVLPLIRIALRKNPVVRDRLFTAVLAGAFAHGF 141

Query: 65  YLVTDIYDAESK 77
           YLVTDIYDAESK
Sbjct: 142 YLVTDIYDAESK 153

[Close]

BLAST of Chy5G103830 vs. ExPASy TrEMBL
Match: A0A6J1CPL9 (uncharacterized protein LOC111013138 OS=Momordica charantia OX=3673 GN=LOC111013138 PE=4 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 1.1e-26
Identity = 64/72 (88.89%), Postives = 67/72 (93.06%), Query Frame = 0


Query: 5  PVDPSSREAFPRKQSAPYKFLVPLVYAPVLPLIRIALRKNPVVRDRLFTAVLAGAFAHGF 64
          P DP++REA  +KQ AP KFLVPLVYAPVLPLIRIALRKNPVVRDRLFTAVLAGAFAHGF
Sbjct: 4  PYDPATREAVRKKQGAPIKFLVPLVYAPVLPLIRIALRKNPVVRDRLFTAVLAGAFAHGF 63

Query: 65 YLVTDIYDAESK 77
          YLVTDIYDAESK
Sbjct: 64 YLVTDIYDAESK 75

[Close]

BLAST of Chy5G103830 vs. NCBI nr
Match: XP_004139325.2 (uncharacterized protein LOC101204118 [Cucumis sativus] >KGN60655.1 hypothetical protein Csa_019484 [Cucumis sativus])

HSP 1 Score: 150 bits (378), Expect = 1.83e-45
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 0


Query: 1  MAPPPVDPSSREAFPRKQSAPYKFLVPLVYAPVLPLIRIALRKNPVVRDRLFTAVLAGAF 60
          MAPPPVDPSSREAFPRKQSAPYKFLVPLVYAPVLPLIRIALRKNPVVRDRLFTAVLAGAF
Sbjct: 1  MAPPPVDPSSREAFPRKQSAPYKFLVPLVYAPVLPLIRIALRKNPVVRDRLFTAVLAGAF 60

Query: 61 AHGFYLVTDIYDAESK 76
          AHGFYLVTDIYDAESK
Sbjct: 61 AHGFYLVTDIYDAESK 76

[Close]

BLAST of Chy5G103830 vs. NCBI nr
Match: XP_008457941.1 (PREDICTED: uncharacterized protein LOC103497503 [Cucumis melo])

HSP 1 Score: 145 bits (366), Expect = 1.24e-43
Identity = 74/76 (97.37%), Postives = 75/76 (98.68%), Query Frame = 0


Query: 1  MAPPPVDPSSREAFPRKQSAPYKFLVPLVYAPVLPLIRIALRKNPVVRDRLFTAVLAGAF 60
          MA PPVDPSSREAFPRKQSAP+KFLVPLVYAPVLPLIRIALRKNPVVRDRLFTAVLAGAF
Sbjct: 1  MASPPVDPSSREAFPRKQSAPFKFLVPLVYAPVLPLIRIALRKNPVVRDRLFTAVLAGAF 60

Query: 61 AHGFYLVTDIYDAESK 76
          AHGFYLVTDIYDAESK
Sbjct: 61 AHGFYLVTDIYDAESK 76

[Close]

BLAST of Chy5G103830 vs. NCBI nr
Match: XP_038891091.1 (uncharacterized protein LOC120080491 isoform X2 [Benincasa hispida])

HSP 1 Score: 136 bits (342), Expect = 5.56e-40
Identity = 69/72 (95.83%), Postives = 70/72 (97.22%), Query Frame = 0


Query: 5  PVDPSSREAFPRKQSAPYKFLVPLVYAPVLPLIRIALRKNPVVRDRLFTAVLAGAFAHGF 64
          P DPSSREA PRKQSAP+KFLVPLVYAPVLPLIRIALRKNPVVRDRLFTAVLAGAFAHGF
Sbjct: 4  PFDPSSREAVPRKQSAPFKFLVPLVYAPVLPLIRIALRKNPVVRDRLFTAVLAGAFAHGF 63

Query: 65 YLVTDIYDAESK 76
          YLVTDIYDAESK
Sbjct: 64 YLVTDIYDAESK 75

[Close]

BLAST of Chy5G103830 vs. NCBI nr
Match: XP_022966034.1 (uncharacterized protein LOC111465738 [Cucurbita maxima] >XP_023536899.1 uncharacterized protein LOC111798144 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 134 bits (338), Expect = 2.27e-39
Identity = 66/72 (91.67%), Postives = 71/72 (98.61%), Query Frame = 0


Query: 5  PVDPSSREAFPRKQSAPYKFLVPLVYAPVLPLIRIALRKNPVVRDRLFTAVLAGAFAHGF 64
          P DP+SREAFP+K+SAP+KFLVPL+YAPVLPLIRIALRKNPVVRDRLFTAVLAGAFAHGF
Sbjct: 4  PYDPTSREAFPKKKSAPFKFLVPLIYAPVLPLIRIALRKNPVVRDRLFTAVLAGAFAHGF 63

Query: 65 YLVTDIYDAESK 76
          YLVTDIYDAESK
Sbjct: 64 YLVTDIYDAESK 75

[Close]

BLAST of Chy5G103830 vs. NCBI nr
Match: KAG6586409.1 (hypothetical protein SDJN03_19142, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 134 bits (338), Expect = 7.90e-39
Identity = 66/72 (91.67%), Postives = 71/72 (98.61%), Query Frame = 0


Query: 5   PVDPSSREAFPRKQSAPYKFLVPLVYAPVLPLIRIALRKNPVVRDRLFTAVLAGAFAHGF 64
           P DP+SREAFP+K+SAP+KFLVPL+YAPVLPLIRIALRKNPVVRDRLFTAVLAGAFAHGF
Sbjct: 46  PYDPTSREAFPKKKSAPFKFLVPLIYAPVLPLIRIALRKNPVVRDRLFTAVLAGAFAHGF 105

Query: 65  YLVTDIYDAESK 76
           YLVTDIYDAESK
Sbjct: 106 YLVTDIYDAESK 117

[Close]

BLAST of Chy5G103830 vs. TAIR 10
Match: AT1G68680.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 16 growth stages; Has 20 Blast hits to 20 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 20; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 102.1 bits (253), Expect = 2.1e-22
Identity = 50/70 (71.43%), Postives = 56/70 (80.00%), Query Frame = 0


Query: 7  DPSSREAFPRKQSAPYKFLVPLVYAPVLPLIRIALRKNPVVRDRLFTAVLAGAFAHGFYL 66
          DPS      +K+ AP KFLVPL+YAP LPLIR++LR  PV+RDRLF  VL GAFAHGFYL
Sbjct: 6  DPSKPVMERKKKGAPIKFLVPLIYAPALPLIRLSLRHKPVLRDRLFGLVLVGAFAHGFYL 65

Query: 67 VTDIYDAESK 77
          VTDIYDAESK
Sbjct: 66 VTDIYDAESK 75

The following BLAST results are available for this feature:

BLAST of Chy5G103830 vs.


Match Name	E-value	Identity	Description

BLAST of Chy5G103830 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LF45	7.1e-34	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G006000 PE=4 SV=1	[more]
A0A1S3C7Y6	1.7e-32	97.37	uncharacterized protein LOC103497503 OS=Cucumis melo OX=3656 GN=LOC103497503 PE=...	[more]
A0A6J1HSI9	3.1e-29	91.67	uncharacterized protein LOC111465738 OS=Cucurbita maxima OX=3661 GN=LOC111465738...	[more]
A0A6J1FDN8	3.1e-29	91.67	uncharacterized protein LOC111444436 OS=Cucurbita moschata OX=3662 GN=LOC1114444...	[more]
A0A6J1CPL9	1.1e-26	88.89	uncharacterized protein LOC111013138 OS=Momordica charantia OX=3673 GN=LOC111013...	[more]

BLAST of Chy5G103830 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004139325.2	1.83e-45	100.00	uncharacterized protein LOC101204118 [Cucumis sativus] >KGN60655.1 hypothetical ...	[more]
XP_008457941.1	1.24e-43	97.37	PREDICTED: uncharacterized protein LOC103497503 [Cucumis melo]	[more]
XP_038891091.1	5.56e-40	95.83	uncharacterized protein LOC120080491 isoform X2 [Benincasa hispida]	[more]
XP_022966034.1	2.27e-39	91.67	uncharacterized protein LOC111465738 [Cucurbita maxima] >XP_023536899.1 uncharac...	[more]
KAG6586409.1	7.90e-39	91.67	hypothetical protein SDJN03_19142, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Chy5G103830 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G68680.1	2.1e-22	71.43	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR37713	OS05G0176600 PROTEIN	coord: 7..76

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy5G103830.1	Chy5G103830.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane