Chy5G103780 (gene) Cucumber (hystrix) v1

Overview


Name	Chy5G103780
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	zinc finger Ran-binding domain-containing protein 2-like
Location	chrH05: 17452482 .. 17453475 (+)
RNA-Seq Expression	Chy5G103780
Synteny	Chy5G103780

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATATGAATTGGTCAGGAGGAGATTGGATGTGTGGTGTTTGTGAACATGTAAACTTCAAGAAAAGAGAAGCTTGTCAAAGATGTGGATATCCAAAATATGGAGGACCTGACCCAACAACATATGATCAATACAATATCATTCATTCTAAAAGCACAGATGAAGTTTTGGCTGGTGATTGGTATTGCAATTGTGGAGCTCATAACTATGCTAGTAGATCATCTTGTTATAGATGTAATAGTAATGCTTATAAAAGTTTTGATATCGGTGCTTTGCCTGGGTGGAAATCTGGCGATTGGATCTGCTCTAGGTATGTTTAATTTCTCTTCTAACCACGTACTGCGTTTCAATTCTGCTTTTCGACTTTCGAATGTTTCCCTTTTATCGTCTTTCAACTTTCACTTTCCAAACACGATTCTTCTCGATAGTTGAGAGAGATCTACATTAGGTATATGTATGTATATATGCTCTCTTACAACCGTTGTTAGCTCAGCAAGAGATCTAGACATTCCAAACACCATTTTTTAAAGACGTTGGAGATGTACTTTATCCCAACAACGATTTCATTCGCATCAAACTAAGTTTTAGATATAAAAATAATGTAGTATTTTTCGATGCCATGTTTTGTATAATTTAACTCAAATGGTTTGAAATGGAAATATGTTGAAATTTTGTGCAGAATAGGATGTGAAACCCACAATTATGCCTGTAGAATGGAATGTTACAAATGCAAAGCTCCGAGGCATTTTGGTAAGAACATCAAATTTTCTTCACTCTTTTTATTTCTTTAGTTCCAAAAGCTCCTTCCAAACTTTTGACATATGGATCGAATGCAAACGTATATGCATCGTAATACCTCAATGCTAAATAATATATACATATATTTTCACAAATATAATAAAATCGTGTCGAGATTTTTAGTTAACTAGTTGAGCTATGCTCGAGTAGTAAAACAAATCGTTTCTCTTTTTTGTTTCAGGAGGAGCTGTTTGA

mRNA sequence

ATGAATATGAATTGGTCAGGAGGAGATTGGATGTGTGGTGTTTGTGAACATGTAAACTTCAAGAAAAGAGAAGCTTGTCAAAGATGTGGATATCCAAAATATGGAGGACCTGACCCAACAACATATGATCAATACAATATCATTCATTCTAAAAGCACAGATGAAGTTTTGGCTGGTGATTGGTATTGCAATTGTGGAGCTCATAACTATGCTAGTAGATCATCTTGTTATAGATGTAATAGTAATGCTTATAAAAGTTTTGATATCGGTGCTTTGCCTGGGTGGAAATCTGGCGATTGGATCTGCTCTAGAATAGGATGTGAAACCCACAATTATGCCTGTAGAATGGAATGTTACAAATGCAAAGCTCCGAGGCATTTTGGAGGAGCTGTTTGA

Coding sequence (CDS)

ATGAATATGAATTGGTCAGGAGGAGATTGGATGTGTGGTGTTTGTGAACATGTAAACTTCAAGAAAAGAGAAGCTTGTCAAAGATGTGGATATCCAAAATATGGAGGACCTGACCCAACAACATATGATCAATACAATATCATTCATTCTAAAAGCACAGATGAAGTTTTGGCTGGTGATTGGTATTGCAATTGTGGAGCTCATAACTATGCTAGTAGATCATCTTGTTATAGATGTAATAGTAATGCTTATAAAAGTTTTGATATCGGTGCTTTGCCTGGGTGGAAATCTGGCGATTGGATCTGCTCTAGAATAGGATGTGAAACCCACAATTATGCCTGTAGAATGGAATGTTACAAATGCAAAGCTCCGAGGCATTTTGGAGGAGCTGTTTGA

Protein sequence

MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYDQYNIIHSKSTDEVLAGDWYCNCGAHNYASRSSCYRCNSNAYKSFDIGALPGWKSGDWICSRIGCETHNYACRMECYKCKAPRHFGGAV*

Homology

[Close]

BLAST of Chy5G103780 vs. ExPASy TrEMBL
Match: A0A1S3C6B6 (uncharacterized RNA-binding protein C17H9.04c OS=Cucumis melo OX=3656 GN=LOC103497392 PE=4 SV=1)

HSP 1 Score: 297.0 bits (759), Expect = 4.0e-77
Identity = 126/131 (96.18%), Postives = 127/131 (96.95%), Query Frame = 0


Query: 1   MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYDQYNIIHSKSTDEVLAGD 60
           MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDP+TYDQYNIIHSKSTDEVLAGD
Sbjct: 1   MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPSTYDQYNIIHSKSTDEVLAGD 60

Query: 61  WYCNCGAHNYASRSSCYRCNSNAYKSFDIGALPGWKSGDWICSRIGCETHNYACRMECYK 120
           WYCNCGAHNYASRSSCYRCNSNAYKS DIGALPGWKSGDWICSRIGCETHNYA RMECYK
Sbjct: 61  WYCNCGAHNYASRSSCYRCNSNAYKSLDIGALPGWKSGDWICSRIGCETHNYASRMECYK 120

Query: 121 CKAPRHFGGAV 132
           CK PR FGGAV
Sbjct: 121 CKTPRDFGGAV 131

[Close]

BLAST of Chy5G103780 vs. ExPASy TrEMBL
Match: A0A0A0LIX1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G006080 PE=4 SV=1)

HSP 1 Score: 296.6 bits (758), Expect = 5.2e-77
Identity = 125/128 (97.66%), Postives = 126/128 (98.44%), Query Frame = 0


Query: 1   MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYDQYNIIHSKSTDEVLAGD 60
           MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYDQYNIIHSKSTDEVLAGD
Sbjct: 1   MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYDQYNIIHSKSTDEVLAGD 60

Query: 61  WYCNCGAHNYASRSSCYRCNSNAYKSFDIGALPGWKSGDWICSRIGCETHNYACRMECYK 120
           WYCNCGAHNYASRSSCY+CNSNAYKS DIGALPGWKSGDWICSRIGCETHNYA RMECYK
Sbjct: 61  WYCNCGAHNYASRSSCYKCNSNAYKSLDIGALPGWKSGDWICSRIGCETHNYASRMECYK 120

Query: 121 CKAPRHFG 129
           CKAPRHFG
Sbjct: 121 CKAPRHFG 128

[Close]

BLAST of Chy5G103780 vs. ExPASy TrEMBL
Match: A0A5D3BFH7 (Putative RNA-binding protein C17H9.04c OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold285G00090 PE=4 SV=1)

HSP 1 Score: 273.1 bits (697), Expect = 6.1e-70
Identity = 117/121 (96.69%), Postives = 118/121 (97.52%), Query Frame = 0


Query: 11  MCGVCEHVNFKKREACQRCGYPKYGGPDPTTYDQYNIIHSKSTDEVLAGDWYCNCGAHNY 70
           MCGVCEHVNFKKREACQRCGYPKYGGPDP+TYDQYNIIHSKSTDEVLAGDWYCNCGAHNY
Sbjct: 1   MCGVCEHVNFKKREACQRCGYPKYGGPDPSTYDQYNIIHSKSTDEVLAGDWYCNCGAHNY 60

Query: 71  ASRSSCYRCNSNAYKSFDIGALPGWKSGDWICSRIGCETHNYACRMECYKCKAPRHFGGA 130
           ASRSSCYRCNSNAYKS DIGALPGWKSGDWICSRIGCETHNYA RMECYKCKAPR FGGA
Sbjct: 61  ASRSSCYRCNSNAYKSLDIGALPGWKSGDWICSRIGCETHNYASRMECYKCKAPRDFGGA 120

Query: 131 V 132
           V
Sbjct: 121 V 121

[Close]

BLAST of Chy5G103780 vs. ExPASy TrEMBL
Match: A0A5A7V2V3 (Putative RNA-binding protein C17H9.04c OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold41G001550 PE=4 SV=1)

HSP 1 Score: 271.6 bits (693), Expect = 1.8e-69
Identity = 116/121 (95.87%), Postives = 117/121 (96.69%), Query Frame = 0


Query: 11  MCGVCEHVNFKKREACQRCGYPKYGGPDPTTYDQYNIIHSKSTDEVLAGDWYCNCGAHNY 70
           MCGVCEHVNFKKREACQRCGYPKYGGPDP+TYDQYNIIHSKSTDEVLAGDWYCNCGAHNY
Sbjct: 1   MCGVCEHVNFKKREACQRCGYPKYGGPDPSTYDQYNIIHSKSTDEVLAGDWYCNCGAHNY 60

Query: 71  ASRSSCYRCNSNAYKSFDIGALPGWKSGDWICSRIGCETHNYACRMECYKCKAPRHFGGA 130
           ASRSSCYRCNSNAYKS DIGALPGWKSGDWICSRIGCETHNYA RMECYKCK PR FGGA
Sbjct: 61  ASRSSCYRCNSNAYKSLDIGALPGWKSGDWICSRIGCETHNYASRMECYKCKTPRDFGGA 120

Query: 131 V 132
           V
Sbjct: 121 V 121

[Close]

BLAST of Chy5G103780 vs. ExPASy TrEMBL
Match: A0A6J1HSH3 (zinc finger Ran-binding domain-containing protein 2-like OS=Cucurbita maxima OX=3661 GN=LOC111465727 PE=4 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 6.6e-64
Identity = 111/131 (84.73%), Postives = 115/131 (87.79%), Query Frame = 0


Query: 1   MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYDQYNIIHSKSTDEVLAGD 60
           MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTY+        +  EVLAGD
Sbjct: 1   MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYE-------FNKTEVLAGD 60

Query: 61  WYCNCGAHNYASRSSCYRCNSNAYKSFDIGALPGWKSGDWICSRIGCETHNYACRMECYK 120
           WYC+CGAHNYASRSSCYRC  NAYKS DIGALPGWKSGDWIC+RIGCETHNYA RMECYK
Sbjct: 61  WYCHCGAHNYASRSSCYRC--NAYKSADIGALPGWKSGDWICNRIGCETHNYASRMECYK 120

Query: 121 CKAPRHFGGAV 132
           CK PR FGGAV
Sbjct: 121 CKTPRDFGGAV 122

[Close]

BLAST of Chy5G103780 vs. NCBI nr
Match: XP_004139322.1 (zinc finger Ran-binding domain-containing protein 2 [Cucumis sativus] >XP_031736555.1 zinc finger Ran-binding domain-containing protein 2 [Cucumis sativus] >KAE8651526.1 hypothetical protein Csa_019441 [Cucumis sativus])

HSP 1 Score: 303 bits (775), Expect = 2.73e-104
Identity = 128/131 (97.71%), Postives = 129/131 (98.47%), Query Frame = 0


Query: 1   MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYDQYNIIHSKSTDEVLAGD 60
           MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYDQYNIIHSKSTDEVLAGD
Sbjct: 1   MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYDQYNIIHSKSTDEVLAGD 60

Query: 61  WYCNCGAHNYASRSSCYRCNSNAYKSFDIGALPGWKSGDWICSRIGCETHNYACRMECYK 120
           WYCNCGAHNYASRSSCY+CNSNAYKS DIGALPGWKSGDWICSRIGCETHNYA RMECYK
Sbjct: 61  WYCNCGAHNYASRSSCYKCNSNAYKSLDIGALPGWKSGDWICSRIGCETHNYASRMECYK 120

Query: 121 CKAPRHFGGAV 131
           CKAPRHFGGAV
Sbjct: 121 CKAPRHFGGAV 131

[Close]

BLAST of Chy5G103780 vs. NCBI nr
Match: XP_008457786.1 (PREDICTED: uncharacterized RNA-binding protein C17H9.04c [Cucumis melo] >XP_008457794.1 PREDICTED: uncharacterized RNA-binding protein C17H9.04c [Cucumis melo])

HSP 1 Score: 297 bits (761), Expect = 3.74e-102
Identity = 126/131 (96.18%), Postives = 127/131 (96.95%), Query Frame = 0


Query: 1   MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYDQYNIIHSKSTDEVLAGD 60
           MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDP+TYDQYNIIHSKSTDEVLAGD
Sbjct: 1   MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPSTYDQYNIIHSKSTDEVLAGD 60

Query: 61  WYCNCGAHNYASRSSCYRCNSNAYKSFDIGALPGWKSGDWICSRIGCETHNYACRMECYK 120
           WYCNCGAHNYASRSSCYRCNSNAYKS DIGALPGWKSGDWICSRIGCETHNYA RMECYK
Sbjct: 61  WYCNCGAHNYASRSSCYRCNSNAYKSLDIGALPGWKSGDWICSRIGCETHNYASRMECYK 120

Query: 121 CKAPRHFGGAV 131
           CK PR FGGAV
Sbjct: 121 CKTPRDFGGAV 131

[Close]

BLAST of Chy5G103780 vs. NCBI nr
Match: TYJ97799.1 (putative RNA-binding protein C17H9.04c [Cucumis melo var. makuwa])

HSP 1 Score: 273 bits (699), Expect = 7.71e-93
Identity = 117/121 (96.69%), Postives = 118/121 (97.52%), Query Frame = 0


Query: 11  MCGVCEHVNFKKREACQRCGYPKYGGPDPTTYDQYNIIHSKSTDEVLAGDWYCNCGAHNY 70
           MCGVCEHVNFKKREACQRCGYPKYGGPDP+TYDQYNIIHSKSTDEVLAGDWYCNCGAHNY
Sbjct: 1   MCGVCEHVNFKKREACQRCGYPKYGGPDPSTYDQYNIIHSKSTDEVLAGDWYCNCGAHNY 60

Query: 71  ASRSSCYRCNSNAYKSFDIGALPGWKSGDWICSRIGCETHNYACRMECYKCKAPRHFGGA 130
           ASRSSCYRCNSNAYKS DIGALPGWKSGDWICSRIGCETHNYA RMECYKCKAPR FGGA
Sbjct: 61  ASRSSCYRCNSNAYKSLDIGALPGWKSGDWICSRIGCETHNYASRMECYKCKAPRDFGGA 120

[Close]

BLAST of Chy5G103780 vs. NCBI nr
Match: KAA0061590.1 (putative RNA-binding protein C17H9.04c [Cucumis melo var. makuwa])

HSP 1 Score: 272 bits (695), Expect = 3.14e-92
Identity = 116/121 (95.87%), Postives = 117/121 (96.69%), Query Frame = 0


Query: 11  MCGVCEHVNFKKREACQRCGYPKYGGPDPTTYDQYNIIHSKSTDEVLAGDWYCNCGAHNY 70
           MCGVCEHVNFKKREACQRCGYPKYGGPDP+TYDQYNIIHSKSTDEVLAGDWYCNCGAHNY
Sbjct: 1   MCGVCEHVNFKKREACQRCGYPKYGGPDPSTYDQYNIIHSKSTDEVLAGDWYCNCGAHNY 60

Query: 71  ASRSSCYRCNSNAYKSFDIGALPGWKSGDWICSRIGCETHNYACRMECYKCKAPRHFGGA 130
           ASRSSCYRCNSNAYKS DIGALPGWKSGDWICSRIGCETHNYA RMECYKCK PR FGGA
Sbjct: 61  ASRSSCYRCNSNAYKSLDIGALPGWKSGDWICSRIGCETHNYASRMECYKCKTPRDFGGA 120

[Close]

BLAST of Chy5G103780 vs. NCBI nr
Match: XP_038890693.1 (zinc finger Ran-binding domain-containing protein 2-like [Benincasa hispida])

HSP 1 Score: 269 bits (687), Expect = 6.18e-91
Identity = 117/131 (89.31%), Postives = 122/131 (93.13%), Query Frame = 0


Query: 1   MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYDQYNIIHSKSTDEVLAGD 60
           MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDP+ YDQY  IHSK TDEVLAGD
Sbjct: 1   MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPSAYDQY--IHSK-TDEVLAGD 60

Query: 61  WYCNCGAHNYASRSSCYRCNSNAYKSFDIGALPGWKSGDWICSRIGCETHNYACRMECYK 120
           WYCNCGAHNYASRS+CYRCN  AYK+ D+GALPGWKSGDWIC+RIGCETHNYA RMECYK
Sbjct: 61  WYCNCGAHNYASRSTCYRCN--AYKTLDVGALPGWKSGDWICTRIGCETHNYASRMECYK 120

Query: 121 CKAPRHFGGAV 131
           CKAPR FGGAV
Sbjct: 121 CKAPRDFGGAV 126

[Close]

BLAST of Chy5G103780 vs. TAIR 10
Match: AT2G26695.1 (Ran BP2/NZF zinc finger-like superfamily protein )

HSP 1 Score: 178.3 bits (451), Expect = 4.0e-45
Identity = 78/144 (54.17%), Postives = 95/144 (65.97%), Query Frame = 0


Query: 3   MNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYDQYNIIHSKSTDEVLAGDWY 62
           M+W+GGDW+CG C+H NFKKRE+CQ+CGYPK+GG D +TY  YN        EV+AGDWY
Sbjct: 1   MSWTGGDWLCGACQHANFKKRESCQKCGYPKFGGVDVSTY-LYN------RTEVMAGDWY 60

Query: 63  C---NCGAHNYASRSSCYRC--------------NSNAYKSFDIGALPGWKSGDWICSRI 122
           C   NCG+HNYASR+SCYRC                 AY +      PGWK+GDW+C R+
Sbjct: 61  CGALNCGSHNYASRTSCYRCGMIKVEYTEQYYGAQMVAYGNDGAACPPGWKTGDWVCPRV 120

Query: 123 GCETHNYACRMECYKCKAPRHFGG 130
           GC  HNYA R EC+KCK  R +GG
Sbjct: 121 GCGVHNYASRAECFKCKTTRDYGG 137

[Close]

BLAST of Chy5G103780 vs. TAIR 10
Match: AT3G15680.1 (Ran BP2/NZF zinc finger-like superfamily protein )

HSP 1 Score: 123.6 bits (309), Expect = 1.2e-28
Identity = 62/154 (40.26%), Postives = 79/154 (51.30%), Query Frame = 0


Query: 8   GDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYDQYNI-------IHSKSTDEVLAGD 67
           GDW C  C H+NF++R++CQRCG  + G       D  N            +  +V  GD
Sbjct: 5   GDWNCRSCSHLNFQRRDSCQRCGDSRSGPGGVGGLDFGNFGGRAMSAFGFTTGSDVRPGD 64

Query: 68  WYC---NCGAHNYASRSSCYRCNS----------------NAYKSFDI--------GALP 127
           WYC   NCG HN+ASRS+C++C +                 A    DI        G   
Sbjct: 65  WYCTVGNCGTHNFASRSTCFKCGTFKDETGAGGGGGGIGGPAMFDADIMRSRVPGNGGRS 124

[Close]

BLAST of Chy5G103780 vs. TAIR 10
Match: AT5G25490.1 (Ran BP2/NZF zinc finger-like superfamily protein )

HSP 1 Score: 117.1 bits (292), Expect = 1.1e-26
Identity = 55/158 (34.81%), Postives = 78/158 (49.37%), Query Frame = 0


Query: 8   GDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYDQY------NIIHSKSTDEVLAGDW 67
           GDW C +C H+NF++R++CQRC  P+ GG        +      +     +  +V  GDW
Sbjct: 5   GDWNCRLCSHLNFQRRDSCQRCREPRPGGISTDLLSGFGGRPVSSSFGFNTGPDVRPGDW 64

Query: 68  YCN---CGAHNYASRSSCYRCN-------------SNAYKSFDIGALPG----------- 126
           YCN   CG HN+A+RSSC++C              +  +   ++G   G           
Sbjct: 65  YCNLGDCGTHNFANRSSCFKCGAAKDEFSCSSAAATTGFMDMNVGPRRGLFGFGGSSSGG 124

[Close]

BLAST of Chy5G103780 vs. TAIR 10
Match: AT2G17975.1 (zinc finger (Ran-binding) family protein )

HSP 1 Score: 75.1 bits (183), Expect = 4.7e-14
Identity = 56/208 (26.92%), Postives = 74/208 (35.58%), Query Frame = 0


Query: 8   GDWMCGVCEHVNFKKREACQRCGYPK--------------------YGGPDPTTYDQYN- 67
           GDW+C  C + N+  RE C++CG  K                    Y    P ++DQ   
Sbjct: 50  GDWICTGCTNNNYASREKCKKCGQSKEVAALSALAIPGASLQTHLHYFTRGPESHDQPGS 109

Query: 68  -IIHSKSTD------EVLAGDWYCNCGAHNYASRSSCYRCN------------------- 126
            +  S +T+      E  +GDW C CG HNY+SR  C +CN                   
Sbjct: 110 LLAFSNATNQASVHKEWRSGDWICRCGFHNYSSRIQCKKCNEIAPLALGTKRLASEALAH 169

The following BLAST results are available for this feature:

BLAST of Chy5G103780 vs.


Match Name	E-value	Identity	Description

BLAST of Chy5G103780 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3C6B6	4.0e-77	96.18	uncharacterized RNA-binding protein C17H9.04c OS=Cucumis melo OX=3656 GN=LOC1034...	[more]
A0A0A0LIX1	5.2e-77	97.66	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G006080 PE=4 SV=1	[more]
A0A5D3BFH7	6.1e-70	96.69	Putative RNA-binding protein C17H9.04c OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A5A7V2V3	1.8e-69	95.87	Putative RNA-binding protein C17H9.04c OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A6J1HSH3	6.6e-64	84.73	zinc finger Ran-binding domain-containing protein 2-like OS=Cucurbita maxima OX=...	[more]

BLAST of Chy5G103780 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004139322.1	2.73e-104	97.71	zinc finger Ran-binding domain-containing protein 2 [Cucumis sativus] >XP_031736...	[more]
XP_008457786.1	3.74e-102	96.18	PREDICTED: uncharacterized RNA-binding protein C17H9.04c [Cucumis melo] >XP_0084...	[more]
TYJ97799.1	7.71e-93	96.69	putative RNA-binding protein C17H9.04c [Cucumis melo var. makuwa]	[more]
KAA0061590.1	3.14e-92	95.87	putative RNA-binding protein C17H9.04c [Cucumis melo var. makuwa]	[more]
XP_038890693.1	6.18e-91	89.31	zinc finger Ran-binding domain-containing protein 2-like [Benincasa hispida]	[more]

BLAST of Chy5G103780 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G26695.1	4.0e-45	54.17	Ran BP2/NZF zinc finger-like superfamily protein	[more]
AT3G15680.1	1.2e-28	40.26	Ran BP2/NZF zinc finger-like superfamily protein	[more]
AT5G25490.1	1.1e-26	34.81	Ran BP2/NZF zinc finger-like superfamily protein	[more]
AT2G17975.1	4.7e-14	26.92	zinc finger (Ran-binding) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001876	Zinc finger, RanBP2-type	SMART	SM00547	zf_4	coord: 98..124 e-value: 0.0046 score: 26.2 coord: 8..32 e-value: 4.3E-6 score: 36.2 coord: 59..82 e-value: 0.002 score: 27.4
IPR001876	Zinc finger, RanBP2-type	PFAM	PF00641	zf-RanBP	coord: 96..125 e-value: 2.4E-6 score: 26.7 coord: 8..34 e-value: 3.2E-4 score: 20.0
IPR001876	Zinc finger, RanBP2-type	PROSITE	PS01358	ZF_RANBP2_1	coord: 10..29
IPR001876	Zinc finger, RanBP2-type	PROSITE	PS01358	ZF_RANBP2_1	coord: 100..121
IPR001876	Zinc finger, RanBP2-type	PROSITE	PS50199	ZF_RANBP2_2	coord: 6..35 score: 8.817719
IPR001876	Zinc finger, RanBP2-type	PROSITE	PS50199	ZF_RANBP2_2	coord: 96..127 score: 9.246823
None	No IPR available	GENE3D	4.10.1060.10		coord: 1..37 e-value: 7.7E-10 score: 39.9 coord: 49..85 e-value: 2.7E-9 score: 38.1 coord: 93..127 e-value: 1.6E-9 score: 38.9
None	No IPR available	PANTHER	PTHR23111	ZINC FINGER PROTEIN	coord: 2..128
None	No IPR available	PANTHER	PTHR23111:SF41	ZINC FINGER, RANBP2-TYPE-RELATED	coord: 2..128
IPR036443	Zinc finger, RanBP2-type superfamily	SUPERFAMILY	90209	Ran binding protein zinc finger-like	coord: 55..84
IPR036443	Zinc finger, RanBP2-type superfamily	SUPERFAMILY	90209	Ran binding protein zinc finger-like	coord: 94..127
IPR036443	Zinc finger, RanBP2-type superfamily	SUPERFAMILY	90209	Ran binding protein zinc finger-like	coord: 2..36

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy5G103780.1	Chy5G103780.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046872	metal ion binding