Chy5G103370 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCTGCCATCGTGTGCGGGAAGAGATCCTTATTTGAAGACCTGCCTACGCCTCCCGTTTCTAAGAGAATTCGTTGTTCGTCTTCTTCGCCTGTGCGGTTTTCGCCTCCAAGATCATCGAATCAGTCTGTTTCTCCCTTTCCCCAGACGTCTTCCTCGCAATCGGCTTACTTAGTCGATTATCTTCGAGCGATTTTTCCTGATATGGATAAGCAGGTCTGTTTGTATATGCACCTTTTTTCCCTTTTCCTCTAGAATTAAGGTTAATTTATGCAATGGATGGATGTTATGAATCGAAATATGAACTACTTGTTTTGTTGTATTCTCAAGACATTTCTGATGATAGATTTTTTGCTTTTGTTTTTAATTCAATGGGAAATGTATTTGAATGCTTACTGTTTGCTTTGAAATTGATATTCTAGCTTCTAGAAAGGGCACTTGAAGAATGTGGTGATGATCTAGATTTAGCCATAAGAAGCTTGAACCAGCTTCATTTAGGGTATAATGACAGAAACTTGGGAGGTGCTTCAAACTCCTCTGATGTGGCTTTGGAAGCAAATGTTCAACCTCAATCTCAAGGTTTGTATTCTACGTGAACTGAACCTTGGACTTAATAATTCTATTCTCAATGCTCTGTAATTGTCTTTATGGGAAATATTTTCAATTTTACGACTGTGACTCTGTGAGTGCACGAGAGAAGATTTCAATGTTTGGTTCATTTATGAATATTTACTTGTGACATTCTTGACATATTCTGAAGTTGTATACTTTCTTGATAAACCCTTTATTTTACAGACCAATTATTTTTCATAGGAGAAGGAATGGTAGTGATTCATTGTTTGAATTCATAACAAGCTTGGGTGCTTGGCTTGCTGGTTAGATTAGTATAACCAAAAGTTAAGAAATCAAATTTATATTTGGTACATGGATTTGCACTCAAAACTATGGGTCGTGAGTTTACTAATACCTTAGGTGACTTAACCTCTGAAGCCATGAATACAAATTTGTTCAATGGACCTCTTATACTGTGCAATGACTTTTGCAAAAGCATATTACACAAACCAAAAATCGTTCATGCTGAACCAAGCTTCAACATCAGATTCATTTGCATTAGCCATACACAGATTAAACAAATTTAAGCATTACAATTCAAACCAACAAGTTTCCAGCAAAGCAAAGAAGAGGCTAGAGAGAATTACATCGAAAGCTCCATTTCTTATGATAAAAGGCACAAACTAAGCATAGAGAGGGGTTTTTTTTTTATCAAAATGACTATTGCTCATCGAGTGCTTTGGTTTGATCGTGGTGCTGCTTATGTCTTTTCATCATCTCTGCCCTTCCTTTGCTGATCTTTGGTTGTATCTCTCTTGTTTGGTTATTCTGCTTTTGTTTGCTTATCCGGTTGTTCTCCCTAATGGGGTCTTCCCTCTGCACTCTTTGGCTATCTCATTCATCTATAAAATTGTTTCTTATCCAAAAAAAAAAAAAAAAAAAAGAAAGAAAAAGAAAAGAAAAAAAAAATCCCTTAAGCTTGAACTTAGGGAAACCGAACATCCTGAAATTGTGCATTTTGTTTTTGTTTTACATTTTTCAGTGAAGCTTGGATTGTCTCGTTTGCCACAGTTGGCTTTTGATATCATTTTTATTCCTCAAATCTATTTGACCTGGATTATAGTGGTAGTTCCATCCAAATCTGCAACCCCAACCAGTAGAGAGTGACTGAGCGAAATGAGTGATCTTTTATTGTCTTTCCTGAATATTCACGACACTCATAGTTTGGGGCTAAGCATTTTTAGGTCGTTAGGACATTGACTGGTGTGGAAGTTACTAAATTTAGTCAGCTTTGATTGGTATCAGAGAGTGCCTAGGATCAACCTTGGTGATGTCATGCAGAGCTTTCTCAATTCTGATGAGAAGTTTTCAAACCTTGAAATTTTTTGTTTAAGCTCATTTATATCAGAGGCAGGTTTTTGTTAATAAAGACATTCCCAATATCATTCCTGGAAAATTTTCTTCAGTTTTTGTTGGTGGAACTTGGAAGTTAGTTTGCTGCCAATCAATTTAGGATATGTTTATTTTTTAGCCTTCTCTACAGAGTGATTTGTCTGTTAGGTTTCGTTGTTTCTAATATTCAGTGGATTGGAGCACTTTTTGTAACTTCCGTTTGATGTGGAGTGCACCTCCTTGTCCGCCTACTCCCCGTTGGTGATTATCTTTTCTTTCAGCATAGTGTTTCTTACCTCCCCGAATTGGGCATTAAGTGAACCCTCATGATGAATAGTATACTGCAGTACACCCCTTTGTTGATCTTTTATTCGTTTTTTGCAAGCAGAAACCTTTTTACTGCCCCCCTTCATATTTGTGCCTTTTAGAATAAAATTTTCTTGTTAGAGATACTGATATATTCTCTCAAATAAAGCAGACACGCAAGGAGAAGCTGCAATTGCCGAGGATGCAACAGCCTCTGAGAATCTTCCCACAAATGGTGCAGAATGGGTGGATCTCTTTGTGAACGAAATGACAAGTGCCTCAAACATGGATGACGCGCGCAGCCGTGCTTCAAGAGTTCTTGAGGTTCTAGAAAAGTCTATCTGTGCCCGTGCAAATGCAGAAGCAGCAAATAATTTTCATCAGGTCTCGAAACGTTTACAATTTCTGCTACTTGTCTGTGCCACCGATATTTTCTGCCACTACAATTTCCTGGGGGCCTTATTGTGATTCTTATTTCGTTTATCTAATCTAGGAAAACAAGATGCTTAGGGAACAAGTGGAAGCCCTTATCCAGGAAAACACTATTCTCAAACGAGCTGTCTCTATCCAGCACGAACGTCAAAAGGAATTTGAAGGCAGGAACCAGGAGTTGCAACAACTCAAAGAATTAGTCTCTCAATACCAGGAGCAGTTGAAAACACTTGAGGTTGGTTCCATAAATGCTCTAAGATCTTACTTCCTTAGTTATTAAAAGTAAAGGCCACGGTTTTAATATCCTTAGAAACAATTTCTCATTAAAAAAAACCATTATCACAATACTTCATAGTCTGATAAACTCTTGCATCTTTTAATGAACTATTAGGTGAATAACTATGCACTTACAGTGCATCTTAAACAAGCTCAACAGAGTAGCTCCATTCCAGGGCGTTTCCATCCTGACGTTTTTTAA ATGTCTGCCATCGTGTGCGGGAAGAGATCCTTATTTGAAGACCTGCCTACGCCTCCCGTTTCTAAGAGAATTCGTTGTTCGTCTTCTTCGCCTGTGCGGTTTTCGCCTCCAAGATCATCGAATCAGTCTGTTTCTCCCTTTCCCCAGACGTCTTCCTCGCAATCGGCTTACTTAGTCGATTATCTTCGAGCGATTTTTCCTGATATGGATAAGCAGCTTCTAGAAAGGGCACTTGAAGAATGTGGTGATGATCTAGATTTAGCCATAAGAAGCTTGAACCAGCTTCATTTAGGGTATAATGACAGAAACTTGGGAGGTGCTTCAAACTCCTCTGATGTGGCTTTGGAAGCAAATGTTCAACCTCAATCTCAAGACACGCAAGGAGAAGCTGCAATTGCCGAGGATGCAACAGCCTCTGAGAATCTTCCCACAAATGGTGCAGAATGGGTGGATCTCTTTGTGAACGAAATGACAAGTGCCTCAAACATGGATGACGCGCGCAGCCGTGCTTCAAGAGTTCTTGAGGTTCTAGAAAAGTCTATCTGTGCCCGTGCAAATGCAGAAGCAGCAAATAATTTTCATCAGGAAAACAAGATGCTTAGGGAACAAGTGGAAGCCCTTATCCAGGAAAACACTATTCTCAAACGAGCTGTCTCTATCCAGCACGAACGTCAAAAGGAATTTGAAGGCAGGAACCAGGAGTTGCAACAACTCAAAGAATTAGTCTCTCAATACCAGGAGCAGTTGAAAACACTTGAGGTGAATAACTATGCACTTACAGTGCATCTTAAACAAGCTCAACAGAGTAGCTCCATTCCAGGGCGTTTCCATCCTGACGTTTTTTAA ATGTCTGCCATCGTGTGCGGGAAGAGATCCTTATTTGAAGACCTGCCTACGCCTCCCGTTTCTAAGAGAATTCGTTGTTCGTCTTCTTCGCCTGTGCGGTTTTCGCCTCCAAGATCATCGAATCAGTCTGTTTCTCCCTTTCCCCAGACGTCTTCCTCGCAATCGGCTTACTTAGTCGATTATCTTCGAGCGATTTTTCCTGATATGGATAAGCAGCTTCTAGAAAGGGCACTTGAAGAATGTGGTGATGATCTAGATTTAGCCATAAGAAGCTTGAACCAGCTTCATTTAGGGTATAATGACAGAAACTTGGGAGGTGCTTCAAACTCCTCTGATGTGGCTTTGGAAGCAAATGTTCAACCTCAATCTCAAGACACGCAAGGAGAAGCTGCAATTGCCGAGGATGCAACAGCCTCTGAGAATCTTCCCACAAATGGTGCAGAATGGGTGGATCTCTTTGTGAACGAAATGACAAGTGCCTCAAACATGGATGACGCGCGCAGCCGTGCTTCAAGAGTTCTTGAGGTTCTAGAAAAGTCTATCTGTGCCCGTGCAAATGCAGAAGCAGCAAATAATTTTCATCAGGAAAACAAGATGCTTAGGGAACAAGTGGAAGCCCTTATCCAGGAAAACACTATTCTCAAACGAGCTGTCTCTATCCAGCACGAACGTCAAAAGGAATTTGAAGGCAGGAACCAGGAGTTGCAACAACTCAAAGAATTAGTCTCTCAATACCAGGAGCAGTTGAAAACACTTGAGGTGAATAACTATGCACTTACAGTGCATCTTAAACAAGCTCAACAGAGTAGCTCCATTCCAGGGCGTTTCCATCCTGACGTTTTTTAA MSAIVCGKRSLFEDLPTPPVSKRIRCSSSSPVRFSPPRSSNQSVSPFPQTSSSQSAYLVDYLRAIFPDMDKQLLERALEECGDDLDLAIRSLNQLHLGYNDRNLGGASNSSDVALEANVQPQSQDTQGEAAIAEDATASENLPTNGAEWVDLFVNEMTSASNMDDARSRASRVLEVLEKSICARANAEAANNFHQENKMLREQVEALIQENTILKRAVSIQHERQKEFEGRNQELQQLKELVSQYQEQLKTLEVNNYALTVHLKQAQQSSSIPGRFHPDVF* Homology
BLAST of Chy5G103370 vs. ExPASy TrEMBL
Match: A0A5D3BFF3 (CUE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold285G00690 PE=4 SV=1) HSP 1 Score: 528.1 bits (1359), Expect = 2.3e-146 Identity = 279/281 (99.29%), Postives = 279/281 (99.29%), Query Frame = 0
BLAST of Chy5G103370 vs. ExPASy TrEMBL
Match: A0A0A0LI42 (CUE domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G007970 PE=4 SV=1) HSP 1 Score: 528.1 bits (1359), Expect = 2.3e-146 Identity = 279/281 (99.29%), Postives = 279/281 (99.29%), Query Frame = 0
BLAST of Chy5G103370 vs. ExPASy TrEMBL
Match: A0A1S3C471 (uncharacterized protein LOC103496812 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103496812 PE=4 SV=1) HSP 1 Score: 528.1 bits (1359), Expect = 2.3e-146 Identity = 279/281 (99.29%), Postives = 279/281 (99.29%), Query Frame = 0
BLAST of Chy5G103370 vs. ExPASy TrEMBL
Match: A0A5A7V8M8 (CUE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold329G00350 PE=4 SV=1) HSP 1 Score: 523.5 bits (1347), Expect = 5.6e-145 Identity = 279/282 (98.94%), Postives = 279/282 (98.94%), Query Frame = 0
BLAST of Chy5G103370 vs. ExPASy TrEMBL
Match: A0A1S3C4J9 (uncharacterized protein LOC103496812 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103496812 PE=4 SV=1) HSP 1 Score: 523.5 bits (1347), Expect = 5.6e-145 Identity = 279/282 (98.94%), Postives = 279/282 (98.94%), Query Frame = 0
BLAST of Chy5G103370 vs. NCBI nr
Match: XP_011648697.1 (uncharacterized protein LOC101217268 isoform X2 [Cucumis sativus] >KGN60704.1 hypothetical protein Csa_019372 [Cucumis sativus]) HSP 1 Score: 530 bits (1365), Expect = 2.87e-189 Identity = 279/281 (99.29%), Postives = 279/281 (99.29%), Query Frame = 0
BLAST of Chy5G103370 vs. NCBI nr
Match: XP_008457047.1 (PREDICTED: uncharacterized protein LOC103496812 isoform X2 [Cucumis melo] >TYJ97857.1 uncharacterized protein E5676_scaffold285G00690 [Cucumis melo var. makuwa]) HSP 1 Score: 530 bits (1365), Expect = 2.87e-189 Identity = 279/281 (99.29%), Postives = 279/281 (99.29%), Query Frame = 0
BLAST of Chy5G103370 vs. NCBI nr
Match: XP_008457037.1 (PREDICTED: uncharacterized protein LOC103496812 isoform X1 [Cucumis melo] >KAA0063530.1 uncharacterized protein E6C27_scaffold329G00350 [Cucumis melo var. makuwa]) HSP 1 Score: 525 bits (1353), Expect = 2.01e-187 Identity = 279/282 (98.94%), Postives = 279/282 (98.94%), Query Frame = 0
BLAST of Chy5G103370 vs. NCBI nr
Match: XP_011648696.1 (uncharacterized protein LOC101217268 isoform X1 [Cucumis sativus]) HSP 1 Score: 525 bits (1353), Expect = 2.01e-187 Identity = 279/282 (98.94%), Postives = 279/282 (98.94%), Query Frame = 0
BLAST of Chy5G103370 vs. NCBI nr
Match: XP_038890913.1 (uncharacterized protein LOC120080344 [Benincasa hispida]) HSP 1 Score: 522 bits (1344), Expect = 4.56e-186 Identity = 273/281 (97.15%), Postives = 279/281 (99.29%), Query Frame = 0
BLAST of Chy5G103370 vs. TAIR 10
Match: AT5G32440.3 (Ubiquitin system component Cue protein ) HSP 1 Score: 290.8 bits (743), Expect = 1.2e-78 Identity = 171/285 (60.00%), Postives = 211/285 (74.04%), Query Frame = 0
BLAST of Chy5G103370 vs. TAIR 10
Match: AT5G32440.1 (Ubiquitin system component Cue protein ) HSP 1 Score: 289.7 bits (740), Expect = 2.6e-78 Identity = 169/285 (59.30%), Postives = 209/285 (73.33%), Query Frame = 0
BLAST of Chy5G103370 vs. TAIR 10
Match: AT1G80040.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin system component Cue (InterPro:IPR003892); BEST Arabidopsis thaliana protein match is: Ubiquitin system component Cue protein (TAIR:AT5G32440.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 195.3 bits (495), Expect = 6.7e-50 Identity = 126/285 (44.21%), Postives = 169/285 (59.30%), Query Frame = 0
BLAST of Chy5G103370 vs. TAIR 10
Match: AT1G80040.3 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: Ubiquitin system component Cue protein (TAIR:AT5G32440.1). ) HSP 1 Score: 188.7 bits (478), Expect = 6.3e-48 Identity = 127/286 (44.41%), Postives = 172/286 (60.14%), Query Frame = 0
BLAST of Chy5G103370 vs. TAIR 10
Match: AT5G32440.2 (Ubiquitin system component Cue protein ) HSP 1 Score: 169.9 bits (429), Expect = 3.0e-42 Identity = 108/200 (54.00%), Postives = 131/200 (65.50%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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