Chy5G102790 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTTCAGCCTCAGCAGCTTCCGCAGTCGCCAAACCTCCCTCCACTTCTCTGCCTCCTCGCACTTTCAACTACACCACTTCTCATTCTTCGCTCTCCTTTCGCCTACCCAACAAGCCCAAACTCCGAATCTTCACAAGGGTATGCGCCAATTCATCTTTCTTTCTTTTTTTTCTTCCACTTTTAACTAGAATTTTTCTATCTTATTTCTCCCAATTGTTGCCATTTTATGTGATGCGTTTCTGATTTACGATTCTCCTGCAATTTTTTCTTTTTCTGGGTTGGTTTTAAATTTCTCTGGGTGCTAATTGGTTTTGTGATTTGGAAAGAATCTGGAAGAGTGTCTTTGGAGGGTTCTTTTGAATGGAATTCTTGGACTGTTTTTGTTGTTATATTGAAGTTTGAAAGCGATTTTAAAGAGTGAAAGAGACGTAGATTTGGTGTAAGTCGGGTACAAGTAGCATAATTCAGGGGGCCATGTTACTGGAAACGTATACAAAACAAACTCCTCCAACTTTTGTAATGGCATGTAGTTTGAGAGAGAAGCAAGGATATCGTCAGAAGCTCCCAAATGAATAAAATCTTTAGAAGGGTAGTTATGTATAGAAAGGGAAAGTGTCCTTTTTGGTGGTTGTTATAGTTTGTAACTAGTGATGTAAGCATATATCACAGATATGTTTTTAAGTAGTTTTCGGAGTATTTTGTGCTTCCTTTTTCACAAATGGCCATGGTTCAGGTTCAGTGAAGTCTATTTCATCTGTCTATTGTCTATCAGATTCAAAATCCATCTGTTATAGCATTTTAGGTGGAACAACCAATGAACTCTAACTAATAAAAACTAAATCTTTTGGTGATCTCAATACTCATTACTCAATTTACTTGAGATCCATTGTTATTTATTTGGAGTTTTGTCAATGCTAATATGATTGCATTGAACTATACCACTTCAGCTGAAAATCTATTTTCCATGCCATGCTGTTACCCTCTCATGATTAGAGCATGTGATATACGTTAGCATTATGTTGCAGGGGGTGCAGCCTGTTCGTAAGCATTCAACTCTCATTCGAGCACAATTGAACGAGGTATGTATGCTTACTTCAAATTCTAATTGTAAAAGGATTTTATTTTGTTGAAGTATTCACTCCTTCCTAACGTCCTGTCCTTGAAGTTGTCTGTTTCATTGAAGGATCCTGTTGATGTACCTACTGTTGCAAAGATTACATCTGAATCTGATGTTTTAGCATCAGATGGAAGTGCTAAGCCATCGAGTGATCAATCTTCTAAAATTTTGGCAACGGAAGAGTCCATCTCTGAGTTCATTACTCAAGTTTCAAGCCTTATCAAGTTAGCTAGCTCAATCTGTGAACTTTTTCTCTAAAGTAACCTACATATGGATGTGGTTATAACATGTTCTTTTATCTGCTCCCAGACTGGTTGATTCCAGAGATATTGTAGAGTTACAATTGAAACAGCTCGACTGTGAAGTGGTGATCCGGAAAAAGGAGGCCTTACCACAGCCACCACCTCCTGCTGCCGTTCCAATGATGTATGCACCCCCACCGTCAGTAGCACAGTCAGCTCCTCCCCCTGCTGCACTACCTGCACTACCAGCTCCTGCTTCTGCTTCAAGTCCTCCATCTTCACCTCCGCCTGCCAAGTCAGCTGCGTCCTCCCTTCCACCTCTTAAATGTCCTATGGCTGGCACATTCTACCGTTGTCCAGGACCTGGACAACCACCATTTGTGAAGGTAAATTTTTATGGCTAATGCTAAATAGTATTTCATAAATCAATTTATTTGAATGGTTCTGCTGCAACATCTATTTTAATTGTAAATCTGTTTTTGGGAATATTTGTGGAATTCTTCCCCTAGGTTGGCGATCAAGTTAAGAAGGGACAAATTTTATGCATCATTGAGGCCATGAAATTAATGAACGAAATAGAAGTAAGATTTCCCATCTCCATCCACTTAAATCTCATGAATATGAGAAGTTATTTTGAATTTTACAGTTGATAGAGTCAATCCATATTCTACCACTGCTTGCTAACTCACTGTCTTCCTTCAGTTTTATGCCCCGTTCCCTGTTTTCCTTGCTAACAGTATATTCTATACTTACCATTTGGTATTGTCTATTGATGAGGGAATGTACTAGAACCACTATCGGATTCACATAGTTTCCGAATTTTACATTCACTGTTTATAATGGCTTCATTATGGATGAAACAATCACTAAATACAGGAAAGATGGAACAATAATCTACTAATTATGAGTTAACATTCATAAAAACAATATACGGGGAACAAAATTAGATCAGACCATTGTAGTTTGCTTCTTATTCTTACATGTGAACATTTACCCCACAATATATCTGTGAATCAGGGTAAATCTCCTATTAGTCCTGCCCAATCCACAACTTTATTTGGTTCTTTGATAATTTCTAGTGATTCCATTTATTGATCAACGAACTTTCATACAACAAATTATAAACAACCACAAAGGGAACTTACACAAAGGTGTTCGCACTGGCGTTAATTACAAAAGGAGGGGAAAAAAGGAGAGAAGGAAGAGAGGCATCAAGAAGAAACCTTACAACTCTTGGACACATTTGGACATATGTAACTGGATCCTATTAAAGTAAGATTGTAGCATCAAGATGAAACCCTGAAGTGAATAGCCTCCCACACATGGTCAATCCTCTCTATTTTAGAAGAGTTGACAGTTTCTTTCCTTCCTAATATCCAAAGTGTAGCATTAATGGCTGCAATCCAAATAAATCTTAGCTTTATGATTCATATCCAAACCATAAAGCTTTTGGTCCAAGGACCTAACACCATCCGTATGGGAGCACCAAGAGACACCAAAAGGATTAAGTAGATTAGTCCACAATTTTTAGCTAACCTAGAACCACAAAAATATATCCTCCTCATTCTTAAAGCATAAATAAGCAATAATAGTGGCCATGCAAAAAAGTGAGCTTAAAAATACGAAAGAACACGAAGACATACGAAAAAGCGAACCTACAAAAGCTAGAGTTAACCTAATTGAGGAGGAAACAATATCATTGGAGTTTCAATGTAGGACGATACTAATGTTAAATCACTACTAAACCCAAAATTTTCAGTTGATGGGTTGTGGTGCATTTTATAGTATGGAAAATTTTAGGAAGTATGTTTACATGAGTTTAGAAGTTCAGTAAAATTGTAAAACATTTTAATTTTAGAAGTTACATTATCGTATGAAGTGTATATTGCAATATATTACATAAAAAGATGTAATAAATCTGCCCACAATGAAGACATACATTCGACCATGGACATCTGTTCGGTCAATTGAACTTGAGAATAAGTTTATTGATTCTGATTTTGAATTCCTAGAATGCTGTTATCGAGCCACCCTTAAAGTTAATATAGAGTTGAATAATGTCTCGTTGTTAGCTACTACTCAGAACACTAGTTTGAGTCACAACATATGCTAATGTTTGCTCTTAAATAAATTAATCTTCAGGCTGATCGATCGGGCACCATAGTCGAGGTTATTGCAGAGGATGGGAAGCCTGTTAGTGTTGGCACGGTAAGTCATTCAAACGATTACAATTAATTGTAATGAATAGCTTAACTCTACATACATTATTTGTTTTCCTGGATTCATGGACTTGTTGTGTCTTCTGGTTTCTTTGCAGCCTTTGTTTGTCATTCAACCTTAG ATGGCTTCAGCCTCAGCAGCTTCCGCAGTCGCCAAACCTCCCTCCACTTCTCTGCCTCCTCGCACTTTCAACTACACCACTTCTCATTCTTCGCTCTCCTTTCGCCTACCCAACAAGCCCAAACTCCGAATCTTCACAAGGGGGGTGCAGCCTGTTCGTAAGCATTCAACTCTCATTCGAGCACAATTGAACGAGTTGTCTGTTTCATTGAAGGATCCTGTTGATGTACCTACTGTTGCAAAGATTACATCTGAATCTGATGTTTTAGCATCAGATGGAAGTGCTAAGCCATCGAGTGATCAATCTTCTAAAATTTTGGCAACGGAAGAGTCCATCTCTGAGTTCATTACTCAAGTTTCAAGCCTTATCAAACTGGTTGATTCCAGAGATATTGTAGAGTTACAATTGAAACAGCTCGACTGTGAAGTGGTGATCCGGAAAAAGGAGGCCTTACCACAGCCACCACCTCCTGCTGCCGTTCCAATGATGTATGCACCCCCACCGTCAGTAGCACAGTCAGCTCCTCCCCCTGCTGCACTACCTGCACTACCAGCTCCTGCTTCTGCTTCAAGTCCTCCATCTTCACCTCCGCCTGCCAAGTCAGCTGCGTCCTCCCTTCCACCTCTTAAATGTCCTATGGCTGGCACATTCTACCGTTGTCCAGGACCTGGACAACCACCATTTGTGAAGGTTGGCGATCAAGTTAAGAAGGGACAAATTTTATGCATCATTGAGGCCATGAAATTAATGAACGAAATAGAAGCTGATCGATCGGGCACCATAGTCGAGGTTATTGCAGAGGATGGGAAGCCTGTTAGTGTTGGCACGCCTTTGTTTGTCATTCAACCTTAG ATGGCTTCAGCCTCAGCAGCTTCCGCAGTCGCCAAACCTCCCTCCACTTCTCTGCCTCCTCGCACTTTCAACTACACCACTTCTCATTCTTCGCTCTCCTTTCGCCTACCCAACAAGCCCAAACTCCGAATCTTCACAAGGGGGGTGCAGCCTGTTCGTAAGCATTCAACTCTCATTCGAGCACAATTGAACGAGTTGTCTGTTTCATTGAAGGATCCTGTTGATGTACCTACTGTTGCAAAGATTACATCTGAATCTGATGTTTTAGCATCAGATGGAAGTGCTAAGCCATCGAGTGATCAATCTTCTAAAATTTTGGCAACGGAAGAGTCCATCTCTGAGTTCATTACTCAAGTTTCAAGCCTTATCAAACTGGTTGATTCCAGAGATATTGTAGAGTTACAATTGAAACAGCTCGACTGTGAAGTGGTGATCCGGAAAAAGGAGGCCTTACCACAGCCACCACCTCCTGCTGCCGTTCCAATGATGTATGCACCCCCACCGTCAGTAGCACAGTCAGCTCCTCCCCCTGCTGCACTACCTGCACTACCAGCTCCTGCTTCTGCTTCAAGTCCTCCATCTTCACCTCCGCCTGCCAAGTCAGCTGCGTCCTCCCTTCCACCTCTTAAATGTCCTATGGCTGGCACATTCTACCGTTGTCCAGGACCTGGACAACCACCATTTGTGAAGGTTGGCGATCAAGTTAAGAAGGGACAAATTTTATGCATCATTGAGGCCATGAAATTAATGAACGAAATAGAAGCTGATCGATCGGGCACCATAGTCGAGGTTATTGCAGAGGATGGGAAGCCTGTTAGTGTTGGCACGCCTTTGTTTGTCATTCAACCTTAG MASASAASAVAKPPSTSLPPRTFNYTTSHSSLSFRLPNKPKLRIFTRGVQPVRKHSTLIRAQLNELSVSLKDPVDVPTVAKITSESDVLASDGSAKPSSDQSSKILATEESISEFITQVSSLIKLVDSRDIVELQLKQLDCEVVIRKKEALPQPPPPAAVPMMYAPPPSVAQSAPPPAALPALPAPASASSPPSSPPPAKSAASSLPPLKCPMAGTFYRCPGPGQPPFVKVGDQVKKGQILCIIEAMKLMNEIEADRSGTIVEVIAEDGKPVSVGTPLFVIQP* Homology
BLAST of Chy5G102790 vs. ExPASy Swiss-Prot
Match: Q42533 (Biotin carboxyl carrier protein of acetyl-CoA carboxylase 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=BCCP1 PE=1 SV=2) HSP 1 Score: 235.3 bits (599), Expect = 8.3e-61 Identity = 154/287 (53.66%), Postives = 194/287 (67.60%), Query Frame = 0
BLAST of Chy5G102790 vs. ExPASy Swiss-Prot
Match: Q42783 (Biotin carboxyl carrier protein of acetyl-CoA carboxylase, chloroplastic OS=Glycine max OX=3847 GN=ACCB-1 PE=1 SV=1) HSP 1 Score: 232.6 bits (592), Expect = 5.4e-60 Identity = 150/270 (55.56%), Postives = 186/270 (68.89%), Query Frame = 0
BLAST of Chy5G102790 vs. ExPASy Swiss-Prot
Match: Q9LLC1 (Biotin carboxyl carrier protein of acetyl-CoA carboxylase 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=BCCP2 PE=1 SV=1) HSP 1 Score: 199.5 bits (506), Expect = 5.0e-50 Identity = 114/172 (66.28%), Postives = 141/172 (81.98%), Query Frame = 0
BLAST of Chy5G102790 vs. ExPASy Swiss-Prot
Match: Q06881 (Biotin carboxyl carrier protein of acetyl-CoA carboxylase OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) OX=103690 GN=accB PE=1 SV=2) HSP 1 Score: 96.3 bits (238), Expect = 6.0e-19 Identity = 70/179 (39.11%), Postives = 100/179 (55.87%), Query Frame = 0
BLAST of Chy5G102790 vs. ExPASy Swiss-Prot
Match: P37799 (Biotin carboxyl carrier protein of acetyl-CoA carboxylase OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) OX=208964 GN=accB PE=3 SV=1) HSP 1 Score: 89.0 bits (219), Expect = 9.6e-17 Identity = 70/166 (42.17%), Postives = 93/166 (56.02%), Query Frame = 0
BLAST of Chy5G102790 vs. ExPASy TrEMBL
Match: A0A0A0LFE8 (Biotin carboxyl carrier protein of acetyl-CoA carboxylase OS=Cucumis sativus OX=3659 GN=Csa_2G009520 PE=4 SV=1) HSP 1 Score: 491.5 bits (1264), Expect = 2.4e-135 Identity = 273/283 (96.47%), Postives = 277/283 (97.88%), Query Frame = 0
BLAST of Chy5G102790 vs. ExPASy TrEMBL
Match: A0A5A7VAX5 (Biotin carboxyl carrier protein of acetyl-CoA carboxylase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold329G00740 PE=4 SV=1) HSP 1 Score: 467.6 bits (1202), Expect = 3.7e-128 Identity = 261/283 (92.23%), Postives = 270/283 (95.41%), Query Frame = 0
BLAST of Chy5G102790 vs. ExPASy TrEMBL
Match: A0A1S3C4K6 (Biotin carboxyl carrier protein of acetyl-CoA carboxylase OS=Cucumis melo OX=3656 GN=LOC103496408 PE=4 SV=1) HSP 1 Score: 467.6 bits (1202), Expect = 3.7e-128 Identity = 261/283 (92.23%), Postives = 270/283 (95.41%), Query Frame = 0
BLAST of Chy5G102790 vs. ExPASy TrEMBL
Match: A0A5D3BDP1 (Biotin carboxyl carrier protein of acetyl-CoA carboxylase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold285G001070 PE=4 SV=1) HSP 1 Score: 451.4 bits (1160), Expect = 2.7e-123 Identity = 255/283 (90.11%), Postives = 264/283 (93.29%), Query Frame = 0
BLAST of Chy5G102790 vs. ExPASy TrEMBL
Match: A0A1S3C3B6 (Biotin carboxyl carrier protein of acetyl-CoA carboxylase OS=Cucumis melo OX=3656 GN=LOC103496408 PE=4 SV=1) HSP 1 Score: 451.4 bits (1160), Expect = 2.7e-123 Identity = 255/283 (90.11%), Postives = 264/283 (93.29%), Query Frame = 0
BLAST of Chy5G102790 vs. NCBI nr
Match: XP_011648731.1 (biotin carboxyl carrier protein of acetyl-CoA carboxylase, chloroplastic isoform X1 [Cucumis sativus]) HSP 1 Score: 492 bits (1267), Expect = 2.78e-174 Identity = 273/283 (96.47%), Postives = 277/283 (97.88%), Query Frame = 0
BLAST of Chy5G102790 vs. NCBI nr
Match: XP_004139256.1 (biotin carboxyl carrier protein of acetyl-CoA carboxylase, chloroplastic isoform X2 [Cucumis sativus] >KAE8651545.1 hypothetical protein Csa_019229 [Cucumis sativus]) HSP 1 Score: 476 bits (1225), Expect = 5.59e-168 Identity = 267/283 (94.35%), Postives = 271/283 (95.76%), Query Frame = 0
BLAST of Chy5G102790 vs. NCBI nr
Match: XP_008456465.1 (PREDICTED: biotin carboxyl carrier protein of acetyl-CoA carboxylase, chloroplastic isoform X1 [Cucumis melo] >KAA0063566.1 biotin carboxyl carrier protein of acetyl-CoA carboxylase [Cucumis melo var. makuwa]) HSP 1 Score: 468 bits (1205), Expect = 8.95e-165 Identity = 261/283 (92.23%), Postives = 270/283 (95.41%), Query Frame = 0
BLAST of Chy5G102790 vs. NCBI nr
Match: XP_008456473.1 (PREDICTED: biotin carboxyl carrier protein of acetyl-CoA carboxylase, chloroplastic isoform X2 [Cucumis melo] >TYJ97892.1 biotin carboxyl carrier protein of acetyl-CoA carboxylase [Cucumis melo var. makuwa]) HSP 1 Score: 452 bits (1163), Expect = 1.80e-158 Identity = 255/283 (90.11%), Postives = 264/283 (93.29%), Query Frame = 0
BLAST of Chy5G102790 vs. NCBI nr
Match: XP_038891208.1 (biotin carboxyl carrier protein of acetyl-CoA carboxylase, chloroplastic-like isoform X1 [Benincasa hispida]) HSP 1 Score: 428 bits (1101), Expect = 6.36e-149 Identity = 244/285 (85.61%), Postives = 259/285 (90.88%), Query Frame = 0
BLAST of Chy5G102790 vs. TAIR 10
Match: AT5G16390.1 (chloroplastic acetylcoenzyme A carboxylase 1 ) HSP 1 Score: 235.3 bits (599), Expect = 5.9e-62 Identity = 154/287 (53.66%), Postives = 194/287 (67.60%), Query Frame = 0
BLAST of Chy5G102790 vs. TAIR 10
Match: AT5G15530.1 (biotin carboxyl carrier protein 2 ) HSP 1 Score: 199.5 bits (506), Expect = 3.6e-51 Identity = 114/172 (66.28%), Postives = 141/172 (81.98%), Query Frame = 0
BLAST of Chy5G102790 vs. TAIR 10
Match: AT5G16390.2 (chloroplastic acetylcoenzyme A carboxylase 1 ) HSP 1 Score: 190.3 bits (482), Expect = 2.2e-48 Identity = 135/258 (52.33%), Postives = 167/258 (64.73%), Query Frame = 0
BLAST of Chy5G102790 vs. TAIR 10
Match: AT3G15690.2 (Single hybrid motif superfamily protein ) HSP 1 Score: 47.8 bits (112), Expect = 1.7e-05 Identity = 76/263 (28.90%), Postives = 112/263 (42.59%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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