Chy5G102650 (gene) Cucumber (hystrix) v1

Overview


Name	Chy5G102650
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	GRF1-interacting factor 1
Location	chrH05: 16595764 .. 16598501 (-)
RNA-Seq Expression	Chy5G102650
Synteny	Chy5G102650

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGGTAATGCAAATCTTTTTTAACTTGACACTTCTTGTTATGACTTTTTTAAATCTATATAAGTAGAGAAGTTAAAAGTGTTTTAATATTATCTTATTATGACGCTAAGATGGAAGAGGGAAGCTTGAATAGTGATTGGTCAATCATGAAACAGTATTTTAAGTTGCTGTCTAGTTATGATTCTCCTGAGTTGCTTTCAAGGATCATACACTTCAGCACTTGCTTTTTATGGTTTATTATGTCTGATCAATCAAATCTAACAATATATGTTATATGTACTTGGAAGATTCTGCACAAACTTAGGAGTTTCAATCTGTTATTTTTTTGTGTGTCCAAAACAAGCTATTCTTTTTCAAGAATGACTTGTTAAACTAGTTAAATATGTTCATTTTCTTTCAAAACTGCCTTGTAGTTGGATTCTTTTTCCTTTTCCTTTCTTCTTATTCTACAAACACCAATACTATCGTCATTTAATTTTTCATCAAATGACTATTTTCGGCAACTTCTTGACGCGGTATTTTAATAATTGTCTAACTTATTATTTGATAATCTACGTTGCAGTATCTGGATGAGAACAAGTCGCTGATATTGAAGATTGTTGAAAGCCAAAACTCAGGAAAATTGAATGAATGTGCAGAGTAAGAATTTATGCTTTCTCTAATGATTCTACTTATCATACATGATTGCTATTGCTCTCATTCATTGTCAATTTTTTTATATGGTCGTGACTTCCATTGCATTCGTTCCAAATTATCCTCTCTGGCTCTCCCTACGTATCTTTGCTCTCTCTCTCTTTTTGTATATTTGGCTGCGGCTGTAATGGTCCAAGAAAGGATATACTATATAGTATAGCTGAATCGTTTCATTACATCACTCTTTAAGTAACTGTCTTAATTTGAATTTTCTTTTTCAGTTTAATATAATGGGTTTTAGGATGAAGAAACATGGATTTCGATATTTATCCTTGGGAAAATCATGTTATATAGTTCTGTTTAAACAAAGTTTTGCTGGGGATTAAAACAGGGTTCTTTTGGAGGCTTTTGTTGGGATCCCACCTAACAAGGATTATCTCAAGAACAAAGGATGAACTCAAGAATAGTTAAAGAACAATCAAATATAAAAATATATGAAATATATTCTAGAATATCATAAGAACAAGTAACAAAGTAGCCTTAGCCTTTCGAGAGGGCTAGACTCTTCCAAGGTCCCCTTACAAGGAAATCCCTTTACAAAATTCTTAACACCTCTCCCCAACCTCTCTTCTACTATTTAGAACAAAATGACCTAACTAACTTACTAACTATTTGCTAATATGCCCCCACTAATAGCCATGTTCATTTTCTACTAATAATCTACTTTCTTTGGTAGTAATCCTCCCTGATACTACTGCTAAGATCACTTTCTCTTTCTGCTTGATCATTTTGATATTTGATTCAAATTCATGGTGATCACAGTTTCTACTTGAGTAACAGCTATTCATGGATGTAAAGTGGAATGATATCTAAGTATCTAACCATTCACCAAATATTCGATTTTGATACAGACGTTGGGAAAACAAAACACTGTCATAGAATTTTCTTGAAAGGAAACCCAAAAATGAAAATATATGGCTTGGTTGTTAAAGTAGGCCTGTAGGCGTATGTCCAAGTAGTATGAACTTATCACATTTCCATAAATGAGTGGAATAATGTCAAGTTTCTCCGATGATATTGGCTTTAGTCACAAGCTTCTGAGGCTGACAACAGGGATTTGATTCATGTTGTTTAATTATCTTGTATTTCTAGACTTCATCAAATGACACAGTTAGTAGTTGAAGCGCAAAACTTACTCTCTCACCTTTTTCCTGTGCAGGAATCAAGCTAGGCTACAGAGAAACCTCATGTACTTGGCTGCCATTGCTGATTCTCAACCTCAACCTTCTGCGATGCATGCCCAGGTATGGACATAACTGTTTCAAGATGTAAATTTATCCAATCACCTGCCAGGCATAGTTATAGAAAACCCATTGTGATTCCGTTAGATCAACACCCTGATCGCTTTCGCCTTAAGAATCATTTTCATTACATCCATTTTTCTGCAACACTCTACAACTTTGGCCACAATTGCCCCTTGGAACATGAGTTCTAGGCCCTAATCCTCTGGATTTGTTTAGCCTACTTGATCATAAGGATTTTAAGTTATTTAAGTTATAGATTTAGGTGATTTATCCTTTTCTTTTTTCTCTTTTTTTCCCTTTTTCTCCTTCAAACTAAATGGAATTGAAATTAATCTAAGATGATTTGCTATTGTCATGTTCTCTTCAGTACTCTTCCAGTGGCATGATCCAACCAGGAGGGCATTACATTCAGCACCAGCAAGCTCAGCAGATGACGCCACAATCGCTGATGGCCGCCCGATCCTCTATGTTGTACTCCCAGCAGCCATTTTCAACACTGCAGCAACAAGCTTTGCACGGCCAACTCGGTATGAGCTCCGGAGGAGGCATAGGATTCAACATGCTGCAAAACGATGCTGCCAATGCAGGAGGAGGCAATGGAGGAGCACTTGGAGGAGGAGGGTTCCCAGATTTCGGCCATGGTGCTGCAAGTGACAGCTTGCACCGTAGCCTAGGCGGTGGGAGCAAGCAAGACATGGGAGGAACTGGGTCTGCAGAGGGACGAGGTGGGAGCTCAGGGAGCCATGGTGGTGATGGAGGCGAGACTCTGTACTTGAAATCAGCTGATGATGGGAACTGA

mRNA sequence

ATGGGGTATCTGGATGAGAACAAGTCGCTGATATTGAAGATTGTTGAAAGCCAAAACTCAGGAAAATTGAATGAATGTGCAGAGAATCAAGCTAGGCTACAGAGAAACCTCATGTACTTGGCTGCCATTGCTGATTCTCAACCTCAACCTTCTGCGATGCATGCCCAGTACTCTTCCAGTGGCATGATCCAACCAGGAGGGCATTACATTCAGCACCAGCAAGCTCAGCAGATGACGCCACAATCGCTGATGGCCGCCCGATCCTCTATGTTGTACTCCCAGCAGCCATTTTCAACACTGCAGCAACAAGCTTTGCACGGCCAACTCGGTATGAGCTCCGGAGGAGGCATAGGATTCAACATGCTGCAAAACGATGCTGCCAATGCAGGAGGAGGCAATGGAGGAGCACTTGGAGGAGGAGGGTTCCCAGATTTCGGCCATGGTGCTGCAAGTGACAGCTTGCACCGTAGCCTAGGCGGTGGGAGCAAGCAAGACATGGGAGGAACTGGGTCTGCAGAGGGACGAGGTGGGAGCTCAGGGAGCCATGGTGGTGATGGAGGCGAGACTCTGTACTTGAAATCAGCTGATGATGGGAACTGA

Coding sequence (CDS)

ATGGGGTATCTGGATGAGAACAAGTCGCTGATATTGAAGATTGTTGAAAGCCAAAACTCAGGAAAATTGAATGAATGTGCAGAGAATCAAGCTAGGCTACAGAGAAACCTCATGTACTTGGCTGCCATTGCTGATTCTCAACCTCAACCTTCTGCGATGCATGCCCAGTACTCTTCCAGTGGCATGATCCAACCAGGAGGGCATTACATTCAGCACCAGCAAGCTCAGCAGATGACGCCACAATCGCTGATGGCCGCCCGATCCTCTATGTTGTACTCCCAGCAGCCATTTTCAACACTGCAGCAACAAGCTTTGCACGGCCAACTCGGTATGAGCTCCGGAGGAGGCATAGGATTCAACATGCTGCAAAACGATGCTGCCAATGCAGGAGGAGGCAATGGAGGAGCACTTGGAGGAGGAGGGTTCCCAGATTTCGGCCATGGTGCTGCAAGTGACAGCTTGCACCGTAGCCTAGGCGGTGGGAGCAAGCAAGACATGGGAGGAACTGGGTCTGCAGAGGGACGAGGTGGGAGCTCAGGGAGCCATGGTGGTGATGGAGGCGAGACTCTGTACTTGAAATCAGCTGATGATGGGAACTGA

Protein sequence

MGYLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQPSAMHAQYSSSGMIQPGGHYIQHQQAQQMTPQSLMAARSSMLYSQQPFSTLQQQALHGQLGMSSGGGIGFNMLQNDAANAGGGNGGALGGGGFPDFGHGAASDSLHRSLGGGSKQDMGGTGSAEGRGGSSGSHGGDGGETLYLKSADDGN*

Homology

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BLAST of Chy5G102650 vs. ExPASy Swiss-Prot
Match: Q8L8A5 (GRF1-interacting factor 1 OS=Arabidopsis thaliana OX=3702 GN=GIF1 PE=1 SV=1)

HSP 1 Score: 191.4 bits (485), Expect = 9.6e-48
Identity = 132/214 (61.68%), Postives = 146/214 (68.22%), Query Frame = 0


Query: 3   YLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQPSAMHAQYSSS-- 62
           YLDENKSLILKIVESQNSGKL+ECAENQARLQRNLMYLAAIADSQPQP ++H+QY S+  
Sbjct: 28  YLDENKSLILKIVESQNSGKLSECAENQARLQRNLMYLAAIADSQPQPPSVHSQYGSAGG 87

Query: 63  GMIQ--PGGHYIQHQQA---QQMTPQSLMAARSSMLYS-----QQPFSTLQQQAL-HGQL 122
           GMIQ   G HY+Q QQA   QQMT QSLMAARSSMLY+     QQP++TLQ Q L H QL
Sbjct: 88  GMIQGEGGSHYLQQQQATQQQQMTQQSLMAARSSMLYAQQQQQQQPYATLQHQQLHHSQL 147

Query: 123 GMSS----GGGIGFNMLQNDAANAGGGNGGALGGGGFPDFGHGAASDSLHRSLGGGSKQD 182
           GMSS    GG  G ++LQ +A             GGF DFG G              K +
Sbjct: 148 GMSSSSGGGGSSGLHILQGEA-------------GGFHDFGRG--------------KPE 207

Query: 183 MGGTGSAEGRGGSSGSHGGDGGETLYLKSADDGN 200
           MG  G  EGRGGSS    GDGGETLYLKS+DDGN
Sbjct: 208 MGSGGGGEGRGGSS----GDGGETLYLKSSDDGN 210

[Close]

BLAST of Chy5G102650 vs. ExPASy Swiss-Prot
Match: Q6AVI1 (GRF-interacting factor 1 OS=Oryza sativa subsp. japonica OX=39947 GN=GIF1 PE=1 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 2.1e-34
Identity = 108/208 (51.92%), Postives = 131/208 (62.98%), Query Frame = 0


Query: 3   YLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQPSAMHAQYSSSGM 62
           YLDENK LIL I+++QN+GK+ ECA NQA+LQ NLMYLAAIADSQP  +A  +QY S+ M
Sbjct: 31  YLDENKQLILAILDNQNNGKVEECARNQAKLQHNLMYLAAIADSQPPQTAAMSQYPSNLM 90

Query: 63  IQPGGHYIQHQQAQQMTPQSLMAARSSMLYSQQPFSTLQQQ------ALHGQLGMSSGGG 122
           +Q G  Y+  Q AQ M PQSLMAARSSM+Y+Q   S LQQQ      A HGQLGM SGG 
Sbjct: 91  MQSGARYMPQQSAQMMAPQSLMAARSSMMYAQPALSPLQQQQQQQAAAAHGQLGMGSGGT 150

Query: 123 I-GFNMLQNDAANAGGGNGGALG-----GGGFPDFGHGAASDSLHRSLGGGSKQDMGGTG 182
             GF++L  +A+  GGG GG  G      G F DFG G          GGG K+  G T 
Sbjct: 151 TSGFSILHGEASMGGGGGGGGAGNSMMNAGVFSDFGRGG---------GGGGKE--GSTS 210

Query: 183 -SAEGRGGSSGSHGGDGGETLYLKSADD 198
            S + RG +SG+  GDG    YLK  ++
Sbjct: 211 LSVDVRGANSGAQSGDGE---YLKGTEE 224

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BLAST of Chy5G102650 vs. ExPASy Swiss-Prot
Match: A5HEH4 (GRF-interacting factor 1 OS=Zea mays OX=4577 GN=GIF1 PE=1 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 2.0e-29
Identity = 103/210 (49.05%), Postives = 130/210 (61.90%), Query Frame = 0


Query: 3   YLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQPSAMHAQYSSSGM 62
           YLDENK LIL I+++QN+GK  EC  +QA+LQ NLMYLAAIADSQP  +A  +QY S+ M
Sbjct: 31  YLDENKQLILAILDNQNNGKAEECERHQAKLQHNLMYLAAIADSQPPQTAPLSQYPSNLM 90

Query: 63  IQPGGHYIQHQQAQQMTPQSLMAARSSMLYSQQPFSTL-QQQALHGQLGMSSGGG----- 122
           +QPG  Y+  Q  Q M PQSLMAARSSM+Y+    S L QQQA HGQLGM+ GGG     
Sbjct: 91  MQPGPRYMPPQSGQMMNPQSLMAARSSMMYAHPSLSPLQQQQAAHGQLGMAPGGGGGGTT 150

Query: 123 IGFNMLQNDAANAGGGNGGALG-----GGGFPDFGHGAASDSLHRSLGGGSKQDMGGTG- 182
            GF++L  +A+  GGG G   G      G F  FG            G G+K+  G T  
Sbjct: 151 SGFSILHGEASMGGGGAGAGAGNNMMNAGMFSGFGRS----------GSGAKE--GSTSL 210

Query: 183 SAEGRGG-SSGSHGGDGGETLYLKSADDGN 200
           S + RGG SSG+  GD GE L + + ++G+
Sbjct: 211 SVDVRGGTSSGAQSGD-GEYLKVGTEEEGS 227

[Close]

BLAST of Chy5G102650 vs. ExPASy Swiss-Prot
Match: Q93VH6 (GRF1-interacting factor 3 OS=Arabidopsis thaliana OX=3702 GN=GIF3 PE=1 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 4.5e-13
Identity = 80/213 (37.56%), Postives = 103/213 (48.36%), Query Frame = 0


Query: 3   YLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQP-------SAMHA 62
           YLDENK LI+ I+E+QN GKL ECA+ QA LQ+NLMYLAAIAD+QPQP        AM  
Sbjct: 29  YLDENKKLIMAILENQNLGKLAECAQYQALLQKNLMYLAAIADAQPQPPAATLTSGAMTP 88

Query: 63  QY---SSSGMIQPGGHYIQHQQA---QQMTPQSLMAARSSMLYSQ-----QPFSTLQQQA 122
           Q    + S M  P  +++Q  QA    Q  P  +   R  + +        P   L QQA
Sbjct: 89  QAMAPNPSSMQPPPSYFMQQHQAVGMAQQIPPGIFPPRGPLQFGSPHQFLDPQQQLHQQA 148

Query: 123 LHGQLGMSSGGGIGFNMLQND--------AANAGGGNGGALGGGGFPDFGHGAASDSLHR 182
           + G +G+   G    N LQ+         AAN  G N  +  GGG PD            
Sbjct: 149 MQGHMGIRPMGLNNNNGLQHQMHHHETALAANNAGPNDAS--GGGKPD------------ 208

Query: 183 SLGGGSKQDMGGTGSAEGRGGSSGSHGGDGGET 190
               G+     G   A+G+GGS+  HGG   +T
Sbjct: 209 ----GTNMSQSG---ADGQGGSAARHGGGDAKT 220

[Close]

BLAST of Chy5G102650 vs. ExPASy Swiss-Prot
Match: Q9MAL9 (GRF1-interacting factor 2 OS=Arabidopsis thaliana OX=3702 GN=GIF2 PE=1 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 1.0e-12
Identity = 68/168 (40.48%), Postives = 93/168 (55.36%), Query Frame = 0


Query: 3   YLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQP--------SAMH 62
           YLDENK LI+ I+E+QN GKL ECA+ QA LQ+NLMYLAAIAD+QP P        +A+ 
Sbjct: 30  YLDENKKLIMAIMENQNLGKLAECAQYQALLQKNLMYLAAIADAQPPPPTPGPSPSTAVA 89

Query: 63  AQYSS--SGMIQPGGHYIQHQQAQQMTPQSLMAARSSMLYSQ-------QPFSTLQQQAL 122
           AQ ++  SGM QP  +++QH QA   +P  + A R  + +         Q    + QQA+
Sbjct: 90  AQMATPHSGM-QPPSYFMQHPQA---SPAGIFAPRGPLQFGSPLQFQDPQQQQQIHQQAM 149

Query: 123 HGQLGMSSGGGIGFNMLQNDAANAGGGNGGALG-GGGFPDFGHGAASD 153
            G +G+    G+  N +Q+       G GG +G  GG  D   G   D
Sbjct: 150 QGHMGIRP-MGMTNNGMQHAMQQPETGLGGNVGLRGGKQDGADGQGKD 192

[Close]

BLAST of Chy5G102650 vs. ExPASy TrEMBL
Match: A0A0A0LL92 (SSXT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G010170 PE=3 SV=1)

HSP 1 Score: 363.6 bits (932), Expect = 5.2e-97
Identity = 196/197 (99.49%), Postives = 196/197 (99.49%), Query Frame = 0


Query: 3   YLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQPSAMHAQYSSSGM 62
           YLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQPSAMHAQYSSSGM
Sbjct: 28  YLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQPSAMHAQYSSSGM 87

Query: 63  IQPGGHYIQHQQAQQMTPQSLMAARSSMLYSQQPFSTLQQQALHGQLGMSSGGGIGFNML 122
           IQPGGHYIQHQQAQQMTPQSLMAARSSMLYSQQPFSTLQQQALHGQLGMSSGGGIGFNML
Sbjct: 88  IQPGGHYIQHQQAQQMTPQSLMAARSSMLYSQQPFSTLQQQALHGQLGMSSGGGIGFNML 147

Query: 123 QNDAANAGGGNGGALGGGGFPDFGHGAASDSLHRSLGGGSKQDMGGTGSAEGRGGSSGSH 182
           QNDAANAGGGNGGALGGGGFPDFGHGAASDSLHRSL GGSKQDMGGTGSAEGRGGSSGSH
Sbjct: 148 QNDAANAGGGNGGALGGGGFPDFGHGAASDSLHRSLAGGSKQDMGGTGSAEGRGGSSGSH 207

Query: 183 GGDGGETLYLKSADDGN 200
           GGDGGETLYLKSADDGN
Sbjct: 208 GGDGGETLYLKSADDGN 224

[Close]

BLAST of Chy5G102650 vs. ExPASy TrEMBL
Match: A0A5A7V8S4 (GRF1-interacting factor 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold285G001230 PE=3 SV=1)

HSP 1 Score: 362.1 bits (928), Expect = 1.5e-96
Identity = 195/197 (98.98%), Postives = 195/197 (98.98%), Query Frame = 0


Query: 3   YLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQPSAMHAQYSSSGM 62
           YLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQPSAMHAQYSSSGM
Sbjct: 14  YLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQPSAMHAQYSSSGM 73

Query: 63  IQPGGHYIQHQQAQQMTPQSLMAARSSMLYSQQPFSTLQQQALHGQLGMSSGGGIGFNML 122
           IQPGGHYIQHQQAQQMTPQSLMAARSSMLYSQQPFSTLQQQALHGQLGMSSGGGIGFNML
Sbjct: 74  IQPGGHYIQHQQAQQMTPQSLMAARSSMLYSQQPFSTLQQQALHGQLGMSSGGGIGFNML 133

Query: 123 QNDAANAGGGNGGALGGGGFPDFGHGAASDSLHRSLGGGSKQDMGGTGSAEGRGGSSGSH 182
           QNDA NAGGGNGGALGGGGFPDFGHGAASDSLHRSL GGSKQDMGGTGSAEGRGGSSGSH
Sbjct: 134 QNDAGNAGGGNGGALGGGGFPDFGHGAASDSLHRSLAGGSKQDMGGTGSAEGRGGSSGSH 193

Query: 183 GGDGGETLYLKSADDGN 200
           GGDGGETLYLKSADDGN
Sbjct: 194 GGDGGETLYLKSADDGN 210

[Close]

BLAST of Chy5G102650 vs. ExPASy TrEMBL
Match: A0A1S3C305 (GRF1-interacting factor 1 OS=Cucumis melo OX=3656 GN=LOC103496282 PE=3 SV=1)

HSP 1 Score: 362.1 bits (928), Expect = 1.5e-96
Identity = 195/197 (98.98%), Postives = 195/197 (98.98%), Query Frame = 0


Query: 3   YLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQPSAMHAQYSSSGM 62
           YLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQPSAMHAQYSSSGM
Sbjct: 28  YLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQPSAMHAQYSSSGM 87

Query: 63  IQPGGHYIQHQQAQQMTPQSLMAARSSMLYSQQPFSTLQQQALHGQLGMSSGGGIGFNML 122
           IQPGGHYIQHQQAQQMTPQSLMAARSSMLYSQQPFSTLQQQALHGQLGMSSGGGIGFNML
Sbjct: 88  IQPGGHYIQHQQAQQMTPQSLMAARSSMLYSQQPFSTLQQQALHGQLGMSSGGGIGFNML 147

Query: 123 QNDAANAGGGNGGALGGGGFPDFGHGAASDSLHRSLGGGSKQDMGGTGSAEGRGGSSGSH 182
           QNDA NAGGGNGGALGGGGFPDFGHGAASDSLHRSL GGSKQDMGGTGSAEGRGGSSGSH
Sbjct: 148 QNDAGNAGGGNGGALGGGGFPDFGHGAASDSLHRSLAGGSKQDMGGTGSAEGRGGSSGSH 207

Query: 183 GGDGGETLYLKSADDGN 200
           GGDGGETLYLKSADDGN
Sbjct: 208 GGDGGETLYLKSADDGN 224

[Close]

BLAST of Chy5G102650 vs. ExPASy TrEMBL
Match: A0A6J1HQC1 (GRF1-interacting factor 1-like OS=Cucurbita maxima OX=3661 GN=LOC111465656 PE=3 SV=1)

HSP 1 Score: 344.4 bits (882), Expect = 3.3e-91
Identity = 187/197 (94.92%), Postives = 191/197 (96.95%), Query Frame = 0


Query: 3   YLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQPSAMHAQYSSSGM 62
           YLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQPSAMHAQYSSSG+
Sbjct: 28  YLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQPSAMHAQYSSSGL 87

Query: 63  IQPGGHYIQHQQAQQMTPQSLMAARSSMLYSQQPFSTLQQQALHGQLGMSSGGGIGFNML 122
           IQPGGHYIQHQQAQQMTPQSLMAARSSMLY+QQPFS+LQQQALH QLGMSSGGGIGFNML
Sbjct: 88  IQPGGHYIQHQQAQQMTPQSLMAARSSMLYTQQPFSSLQQQALHSQLGMSSGGGIGFNML 147

Query: 123 QNDAANAGGGNGGALGGGGFPDFGHGAASDSLHRSLGGGSKQDMGGTGSAEGRGGSSGSH 182
           QNDAANA GGNGGALGGGGFPDF H AA+DSLHRSL GGSKQDMGGTGS EGRGGSSGSH
Sbjct: 148 QNDAANA-GGNGGALGGGGFPDFSHNAAADSLHRSLAGGSKQDMGGTGSGEGRGGSSGSH 207

Query: 183 GGDGGETLYLKSADDGN 200
           GGDGGETLYLKSADDGN
Sbjct: 208 GGDGGETLYLKSADDGN 223

[Close]

BLAST of Chy5G102650 vs. ExPASy TrEMBL
Match: A0A6J1FCK8 (GRF1-interacting factor 1-like OS=Cucurbita moschata OX=3662 GN=LOC111444175 PE=3 SV=1)

HSP 1 Score: 339.7 bits (870), Expect = 8.1e-90
Identity = 187/198 (94.44%), Postives = 191/198 (96.46%), Query Frame = 0


Query: 3   YLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQPSAMHAQYSSSGM 62
           YLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQPSAMHAQYSSSG+
Sbjct: 28  YLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQPSAMHAQYSSSGL 87

Query: 63  IQPGGHYIQHQQAQQMTPQSLMAARSSMLYSQQPFSTLQQQALHGQLGMSSGGGIGFNML 122
           IQPGGHYIQHQQAQQMTPQSLMAARSSMLY+QQPFS+LQQQALH QLGMSSGGGIGFNML
Sbjct: 88  IQPGGHYIQHQQAQQMTPQSLMAARSSMLYTQQPFSSLQQQALHSQLGMSSGGGIGFNML 147

Query: 123 QNDAANAGGGNGGAL-GGGGFPDFGHGAASDSLHRSLGGGSKQDMGGTGSAEGRGGSSGS 182
           QNDAANA GGNGGAL GGGGFPDF H AA+DSLHRSL GGSKQDMGGTGS EGRGGSSGS
Sbjct: 148 QNDAANA-GGNGGALGGGGGFPDFSHNAAADSLHRSLAGGSKQDMGGTGSGEGRGGSSGS 207

Query: 183 HGGDGGETLYLKSADDGN 200
           HGGDGGETLYLKSADDGN
Sbjct: 208 HGGDGGETLYLKSADDGN 224

[Close]

BLAST of Chy5G102650 vs. NCBI nr
Match: KAE8651552.1 (hypothetical protein Csa_019498 [Cucumis sativus])

HSP 1 Score: 366 bits (939), Expect = 9.41e-127
Identity = 196/197 (99.49%), Postives = 196/197 (99.49%), Query Frame = 0


Query: 3   YLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQPSAMHAQYSSSGM 62
           YLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQPSAMHAQYSSSGM
Sbjct: 23  YLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQPSAMHAQYSSSGM 82

Query: 63  IQPGGHYIQHQQAQQMTPQSLMAARSSMLYSQQPFSTLQQQALHGQLGMSSGGGIGFNML 122
           IQPGGHYIQHQQAQQMTPQSLMAARSSMLYSQQPFSTLQQQALHGQLGMSSGGGIGFNML
Sbjct: 83  IQPGGHYIQHQQAQQMTPQSLMAARSSMLYSQQPFSTLQQQALHGQLGMSSGGGIGFNML 142

Query: 123 QNDAANAGGGNGGALGGGGFPDFGHGAASDSLHRSLGGGSKQDMGGTGSAEGRGGSSGSH 182
           QNDAANAGGGNGGALGGGGFPDFGHGAASDSLHRSL GGSKQDMGGTGSAEGRGGSSGSH
Sbjct: 143 QNDAANAGGGNGGALGGGGFPDFGHGAASDSLHRSLAGGSKQDMGGTGSAEGRGGSSGSH 202

Query: 183 GGDGGETLYLKSADDGN 199
           GGDGGETLYLKSADDGN
Sbjct: 203 GGDGGETLYLKSADDGN 219

[Close]

BLAST of Chy5G102650 vs. NCBI nr
Match: XP_004139249.1 (GRF1-interacting factor 1 isoform X2 [Cucumis sativus])

HSP 1 Score: 366 bits (939), Expect = 1.12e-126
Identity = 196/197 (99.49%), Postives = 196/197 (99.49%), Query Frame = 0


Query: 3   YLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQPSAMHAQYSSSGM 62
           YLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQPSAMHAQYSSSGM
Sbjct: 28  YLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQPSAMHAQYSSSGM 87

Query: 63  IQPGGHYIQHQQAQQMTPQSLMAARSSMLYSQQPFSTLQQQALHGQLGMSSGGGIGFNML 122
           IQPGGHYIQHQQAQQMTPQSLMAARSSMLYSQQPFSTLQQQALHGQLGMSSGGGIGFNML
Sbjct: 88  IQPGGHYIQHQQAQQMTPQSLMAARSSMLYSQQPFSTLQQQALHGQLGMSSGGGIGFNML 147

Query: 123 QNDAANAGGGNGGALGGGGFPDFGHGAASDSLHRSLGGGSKQDMGGTGSAEGRGGSSGSH 182
           QNDAANAGGGNGGALGGGGFPDFGHGAASDSLHRSL GGSKQDMGGTGSAEGRGGSSGSH
Sbjct: 148 QNDAANAGGGNGGALGGGGFPDFGHGAASDSLHRSLAGGSKQDMGGTGSAEGRGGSSGSH 207

Query: 183 GGDGGETLYLKSADDGN 199
           GGDGGETLYLKSADDGN
Sbjct: 208 GGDGGETLYLKSADDGN 224

[Close]

BLAST of Chy5G102650 vs. NCBI nr
Match: KAA0063580.1 (GRF1-interacting factor 1 [Cucumis melo var. makuwa] >TYJ97907.1 GRF1-interacting factor 1 [Cucumis melo var. makuwa])

HSP 1 Score: 364 bits (935), Expect = 2.79e-126
Identity = 195/197 (98.98%), Postives = 195/197 (98.98%), Query Frame = 0


Query: 3   YLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQPSAMHAQYSSSGM 62
           YLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQPSAMHAQYSSSGM
Sbjct: 14  YLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQPSAMHAQYSSSGM 73

Query: 63  IQPGGHYIQHQQAQQMTPQSLMAARSSMLYSQQPFSTLQQQALHGQLGMSSGGGIGFNML 122
           IQPGGHYIQHQQAQQMTPQSLMAARSSMLYSQQPFSTLQQQALHGQLGMSSGGGIGFNML
Sbjct: 74  IQPGGHYIQHQQAQQMTPQSLMAARSSMLYSQQPFSTLQQQALHGQLGMSSGGGIGFNML 133

Query: 123 QNDAANAGGGNGGALGGGGFPDFGHGAASDSLHRSLGGGSKQDMGGTGSAEGRGGSSGSH 182
           QNDA NAGGGNGGALGGGGFPDFGHGAASDSLHRSL GGSKQDMGGTGSAEGRGGSSGSH
Sbjct: 134 QNDAGNAGGGNGGALGGGGFPDFGHGAASDSLHRSLAGGSKQDMGGTGSAEGRGGSSGSH 193

Query: 183 GGDGGETLYLKSADDGN 199
           GGDGGETLYLKSADDGN
Sbjct: 194 GGDGGETLYLKSADDGN 210

[Close]

BLAST of Chy5G102650 vs. NCBI nr
Match: XP_031737190.1 (GRF1-interacting factor 1 isoform X1 [Cucumis sativus])

HSP 1 Score: 366 bits (939), Expect = 3.35e-126
Identity = 196/197 (99.49%), Postives = 196/197 (99.49%), Query Frame = 0


Query: 3   YLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQPSAMHAQYSSSGM 62
           YLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQPSAMHAQYSSSGM
Sbjct: 59  YLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQPSAMHAQYSSSGM 118

Query: 63  IQPGGHYIQHQQAQQMTPQSLMAARSSMLYSQQPFSTLQQQALHGQLGMSSGGGIGFNML 122
           IQPGGHYIQHQQAQQMTPQSLMAARSSMLYSQQPFSTLQQQALHGQLGMSSGGGIGFNML
Sbjct: 119 IQPGGHYIQHQQAQQMTPQSLMAARSSMLYSQQPFSTLQQQALHGQLGMSSGGGIGFNML 178

Query: 123 QNDAANAGGGNGGALGGGGFPDFGHGAASDSLHRSLGGGSKQDMGGTGSAEGRGGSSGSH 182
           QNDAANAGGGNGGALGGGGFPDFGHGAASDSLHRSL GGSKQDMGGTGSAEGRGGSSGSH
Sbjct: 179 QNDAANAGGGNGGALGGGGFPDFGHGAASDSLHRSLAGGSKQDMGGTGSAEGRGGSSGSH 238

Query: 183 GGDGGETLYLKSADDGN 199
           GGDGGETLYLKSADDGN
Sbjct: 239 GGDGGETLYLKSADDGN 255

[Close]

BLAST of Chy5G102650 vs. NCBI nr
Match: XP_008456296.1 (PREDICTED: GRF1-interacting factor 1 [Cucumis melo])

HSP 1 Score: 364 bits (935), Expect = 4.57e-126
Identity = 195/197 (98.98%), Postives = 195/197 (98.98%), Query Frame = 0


Query: 3   YLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQPSAMHAQYSSSGM 62
           YLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQPSAMHAQYSSSGM
Sbjct: 28  YLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQPSAMHAQYSSSGM 87

Query: 63  IQPGGHYIQHQQAQQMTPQSLMAARSSMLYSQQPFSTLQQQALHGQLGMSSGGGIGFNML 122
           IQPGGHYIQHQQAQQMTPQSLMAARSSMLYSQQPFSTLQQQALHGQLGMSSGGGIGFNML
Sbjct: 88  IQPGGHYIQHQQAQQMTPQSLMAARSSMLYSQQPFSTLQQQALHGQLGMSSGGGIGFNML 147

Query: 123 QNDAANAGGGNGGALGGGGFPDFGHGAASDSLHRSLGGGSKQDMGGTGSAEGRGGSSGSH 182
           QNDA NAGGGNGGALGGGGFPDFGHGAASDSLHRSL GGSKQDMGGTGSAEGRGGSSGSH
Sbjct: 148 QNDAGNAGGGNGGALGGGGFPDFGHGAASDSLHRSLAGGSKQDMGGTGSAEGRGGSSGSH 207

Query: 183 GGDGGETLYLKSADDGN 199
           GGDGGETLYLKSADDGN
Sbjct: 208 GGDGGETLYLKSADDGN 224

[Close]

BLAST of Chy5G102650 vs. TAIR 10
Match: AT5G28640.1 (SSXT family protein )

HSP 1 Score: 191.4 bits (485), Expect = 6.9e-49
Identity = 132/214 (61.68%), Postives = 146/214 (68.22%), Query Frame = 0


Query: 3   YLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQPSAMHAQYSSS-- 62
           YLDENKSLILKIVESQNSGKL+ECAENQARLQRNLMYLAAIADSQPQP ++H+QY S+  
Sbjct: 28  YLDENKSLILKIVESQNSGKLSECAENQARLQRNLMYLAAIADSQPQPPSVHSQYGSAGG 87

Query: 63  GMIQ--PGGHYIQHQQA---QQMTPQSLMAARSSMLYS-----QQPFSTLQQQAL-HGQL 122
           GMIQ   G HY+Q QQA   QQMT QSLMAARSSMLY+     QQP++TLQ Q L H QL
Sbjct: 88  GMIQGEGGSHYLQQQQATQQQQMTQQSLMAARSSMLYAQQQQQQQPYATLQHQQLHHSQL 147

Query: 123 GMSS----GGGIGFNMLQNDAANAGGGNGGALGGGGFPDFGHGAASDSLHRSLGGGSKQD 182
           GMSS    GG  G ++LQ +A             GGF DFG G              K +
Sbjct: 148 GMSSSSGGGGSSGLHILQGEA-------------GGFHDFGRG--------------KPE 207

Query: 183 MGGTGSAEGRGGSSGSHGGDGGETLYLKSADDGN 200
           MG  G  EGRGGSS    GDGGETLYLKS+DDGN
Sbjct: 208 MGSGGGGEGRGGSS----GDGGETLYLKSSDDGN 210

[Close]

BLAST of Chy5G102650 vs. TAIR 10
Match: AT4G00850.1 (GRF1-interacting factor 3 )

HSP 1 Score: 76.3 bits (186), Expect = 3.2e-14
Identity = 80/213 (37.56%), Postives = 103/213 (48.36%), Query Frame = 0


Query: 3   YLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQP-------SAMHA 62
           YLDENK LI+ I+E+QN GKL ECA+ QA LQ+NLMYLAAIAD+QPQP        AM  
Sbjct: 29  YLDENKKLIMAILENQNLGKLAECAQYQALLQKNLMYLAAIADAQPQPPAATLTSGAMTP 88

Query: 63  QY---SSSGMIQPGGHYIQHQQA---QQMTPQSLMAARSSMLYSQ-----QPFSTLQQQA 122
           Q    + S M  P  +++Q  QA    Q  P  +   R  + +        P   L QQA
Sbjct: 89  QAMAPNPSSMQPPPSYFMQQHQAVGMAQQIPPGIFPPRGPLQFGSPHQFLDPQQQLHQQA 148

Query: 123 LHGQLGMSSGGGIGFNMLQND--------AANAGGGNGGALGGGGFPDFGHGAASDSLHR 182
           + G +G+   G    N LQ+         AAN  G N  +  GGG PD            
Sbjct: 149 MQGHMGIRPMGLNNNNGLQHQMHHHETALAANNAGPNDAS--GGGKPD------------ 208

Query: 183 SLGGGSKQDMGGTGSAEGRGGSSGSHGGDGGET 190
               G+     G   A+G+GGS+  HGG   +T
Sbjct: 209 ----GTNMSQSG---ADGQGGSAARHGGGDAKT 220

[Close]

BLAST of Chy5G102650 vs. TAIR 10
Match: AT1G01160.2 (GRF1-interacting factor 2 )

HSP 1 Score: 75.5 bits (184), Expect = 5.5e-14
Identity = 68/170 (40.00%), Postives = 94/170 (55.29%), Query Frame = 0


Query: 1   MGYLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQP--------SA 60
           + YLDENK LI+ I+E+QN GKL ECA+ QA LQ+NLMYLAAIAD+QP P        +A
Sbjct: 62  LDYLDENKKLIMAIMENQNLGKLAECAQYQALLQKNLMYLAAIADAQPPPPTPGPSPSTA 121

Query: 61  MHAQYSS--SGMIQPGGHYIQHQQAQQMTPQSLMAARSSMLYSQ-------QPFSTLQQQ 120
           + AQ ++  SGM QP  +++QH QA   +P  + A R  + +         Q    + QQ
Sbjct: 122 VAAQMATPHSGM-QPPSYFMQHPQA---SPAGIFAPRGPLQFGSPLQFQDPQQQQQIHQQ 181

Query: 121 ALHGQLGMSSGGGIGFNMLQNDAANAGGGNGGALG-GGGFPDFGHGAASD 153
           A+ G +G+    G+  N +Q+       G GG +G  GG  D   G   D
Sbjct: 182 AMQGHMGIRP-MGMTNNGMQHAMQQPETGLGGNVGLRGGKQDGADGQGKD 226

[Close]

BLAST of Chy5G102650 vs. TAIR 10
Match: AT1G01160.1 (GRF1-interacting factor 2 )

HSP 1 Score: 75.1 bits (183), Expect = 7.2e-14
Identity = 68/168 (40.48%), Postives = 93/168 (55.36%), Query Frame = 0


Query: 3   YLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQP--------SAMH 62
           YLDENK LI+ I+E+QN GKL ECA+ QA LQ+NLMYLAAIAD+QP P        +A+ 
Sbjct: 30  YLDENKKLIMAIMENQNLGKLAECAQYQALLQKNLMYLAAIADAQPPPPTPGPSPSTAVA 89

Query: 63  AQYSS--SGMIQPGGHYIQHQQAQQMTPQSLMAARSSMLYSQ-------QPFSTLQQQAL 122
           AQ ++  SGM QP  +++QH QA   +P  + A R  + +         Q    + QQA+
Sbjct: 90  AQMATPHSGM-QPPSYFMQHPQA---SPAGIFAPRGPLQFGSPLQFQDPQQQQQIHQQAM 149

Query: 123 HGQLGMSSGGGIGFNMLQNDAANAGGGNGGALG-GGGFPDFGHGAASD 153
            G +G+    G+  N +Q+       G GG +G  GG  D   G   D
Sbjct: 150 QGHMGIRP-MGMTNNGMQHAMQQPETGLGGNVGLRGGKQDGADGQGKD 192

The following BLAST results are available for this feature:

BLAST of Chy5G102650 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L8A5	9.6e-48	61.68	GRF1-interacting factor 1 OS=Arabidopsis thaliana OX=3702 GN=GIF1 PE=1 SV=1	[more]
Q6AVI1	2.1e-34	51.92	GRF-interacting factor 1 OS=Oryza sativa subsp. japonica OX=39947 GN=GIF1 PE=1 S...	[more]
A5HEH4	2.0e-29	49.05	GRF-interacting factor 1 OS=Zea mays OX=4577 GN=GIF1 PE=1 SV=1	[more]
Q93VH6	4.5e-13	37.56	GRF1-interacting factor 3 OS=Arabidopsis thaliana OX=3702 GN=GIF3 PE=1 SV=1	[more]
Q9MAL9	1.0e-12	40.48	GRF1-interacting factor 2 OS=Arabidopsis thaliana OX=3702 GN=GIF2 PE=1 SV=1	[more]

BLAST of Chy5G102650 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LL92	5.2e-97	99.49	SSXT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G010170 PE=3 S...	[more]
A0A5A7V8S4	1.5e-96	98.98	GRF1-interacting factor 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A1S3C305	1.5e-96	98.98	GRF1-interacting factor 1 OS=Cucumis melo OX=3656 GN=LOC103496282 PE=3 SV=1	[more]
A0A6J1HQC1	3.3e-91	94.92	GRF1-interacting factor 1-like OS=Cucurbita maxima OX=3661 GN=LOC111465656 PE=3 ...	[more]
A0A6J1FCK8	8.1e-90	94.44	GRF1-interacting factor 1-like OS=Cucurbita moschata OX=3662 GN=LOC111444175 PE=...	[more]

BLAST of Chy5G102650 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8651552.1	9.41e-127	99.49	hypothetical protein Csa_019498 [Cucumis sativus]	[more]
XP_004139249.1	1.12e-126	99.49	GRF1-interacting factor 1 isoform X2 [Cucumis sativus]	[more]
KAA0063580.1	2.79e-126	98.98	GRF1-interacting factor 1 [Cucumis melo var. makuwa] >TYJ97907.1 GRF1-interactin...	[more]
XP_031737190.1	3.35e-126	99.49	GRF1-interacting factor 1 isoform X1 [Cucumis sativus]	[more]
XP_008456296.1	4.57e-126	98.98	PREDICTED: GRF1-interacting factor 1 [Cucumis melo]	[more]

BLAST of Chy5G102650 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G28640.1	6.9e-49	61.68	SSXT family protein	[more]
AT4G00850.1	3.2e-14	37.56	GRF1-interacting factor 3	[more]
AT1G01160.2	5.5e-14	40.00	GRF1-interacting factor 2	[more]
AT1G01160.1	7.2e-14	40.48	GRF1-interacting factor 2	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007726	SS18, N-terminal	PFAM	PF05030	SSXT	coord: 4..51 e-value: 6.4E-18 score: 64.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 148..199
None	No IPR available	PANTHER	PTHR23107:SF18	GRF1-INTERACTING FACTOR 1	coord: 3..199
IPR044779	SS18 family	PANTHER	PTHR23107	SYNOVIAL SARCOMA ASSOCIATED SS18 PROTEIN	coord: 3..199

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy5G102650.1	Chy5G102650.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008283	cell population proliferation
biological_process	GO:0048366	leaf development
biological_process	GO:0045944	positive regulation of transcription by RNA polymerase II
biological_process	GO:0048316	seed development
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003713	transcription coactivator activity