Chy5G102470 (gene) Cucumber (hystrix) v1

Overview


Name	Chy5G102470
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Pathogenesis-related protein PR-4-like
Location	chrH05: 16476567 .. 16478112 (+)
RNA-Seq Expression	Chy5G102470
Synteny	Chy5G102470

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACAGCCAGTGTGTTTTGTTCAACTTGGGATGCTAATAAGCCCTTGAATTGGCGCAAACACTACGGTTGGACTGCCTTTTGCGGCCCCGTCGGTCCATCAGGCCGAGATTCTTGTGGTCGATGCCTTAGGGTATATACATCTATCTTTTTATCTTTCGTGTTAGTTCATTTATCTGTTTCAATTCTATTTTGATTGTGTTACTCTTCTTTATAGAATTTATTTGTTTTATGTTTTAGGAAAATAAAGGTTTACTTAACTAAATAATCCATCTAGATAGATAGAATAAGAGATTGAACTACTCATGATAGAAATAGTCATCTAATTTCACATAAGCTATATGCTCATACATTATAATACAAGAAGATTTTTTTTTTTTTTTACTTTGTATACTTGTGGAAGCTACGTTCATTTTCTTACATAGTTTTTTATTCAATTTTTGTTGCATATAATAGAAATTCATTTCTATTTTTATGGCGAAAATATGATATATTGATCACTATGTATTTTATTATATTTATATTACATTTACAGAGTAATTAAATTCAACAATAACTTTTTAATTTTTTGGAAAAAGGTTCCATCAATCATCTAATTTTTTTTTTGTCTGCTTTTTATTTATTTTATAAGTTTCAGAATTTTACACTTTTAGGTTTATAATTTTGAAATCAAACTTTGGAAAAGAAATATATTATTTTATGACATGTAATAAAGTAAAGTGCTCATAGTGTTTACAAATTATGTATATTACAATTAATGACCAAACAAAAATATGCCTTCTTTAATCATTTTTTTATCGAAGTATGTATACAAAAGTTGAAGAAAAAATATCTCAAGCGAAGTTCAAAAGTTAGAGTCAAACCTTCATCTTTAAACGTGTCTTTTCAAATATATGAAATTTTAGGAATTAAAGTGTGTTTATGTATCTATGTATATGTGTATATGTCTCTATCTAGATATATGTATATGTATATATGTAAGCTTTCATTTCCATTGAGTATATTTATGTACTAAAATATAGTAGGTACACTAACTCTTAAGTTTATAAGTTTAATTTAATCGTCAAAATGAGTATAATGATAATTAATGTGTACTATTTCCTTAAAATTCAGGTTCAAATTTATGTATCTTTACTTTTATATTTTAAAAAAAATATTTAAGATTTAATTATTTATTTTCAAATAAATTTAACTTAGTTGTAATTGATTAGCATCTACTTCCTCTCTTAAAGTTGAAGTTTTGGTTGTCTTTAATCTCTATGATCATTCTATTAAAAAAAACCCAATTGTTTATAGATTTAATTGCACTTTTGTTTAAAAATGACATAAAATTATTATATTTCGAACCTAACCAAAAGGGAAATAATTTTGTATATGTGCAGGTGAGAAACACAGAAACAGGAGATGAAGAAACAGTAAGAATTGTGGATCAATGCAGCAATGGTGGGTTAGATTTGGACTTTGGTGTTTTTCAAAAATTGGACACTAATGGAAATGGCTTTGCTCGTGGTCATCTTATAGTTGATTACCGCTTTGTTAATTGCTAA

mRNA sequence

ATGACAGCCAGTGTGTTTTGTTCAACTTGGGATGCTAATAAGCCCTTGAATTGGCGCAAACACTACGGTTGGACTGCCTTTTGCGGCCCCGTCGGTCCATCAGGCCGAGATTCTTGTGGTCGATGCCTTAGGGTGAGAAACACAGAAACAGGAGATGAAGAAACAGTAAGAATTGTGGATCAATGCAGCAATGGTGGGTTAGATTTGGACTTTGGTGTTTTTCAAAAATTGGACACTAATGGAAATGGCTTTGCTCGTGGTCATCTTATAGTTGATTACCGCTTTGTTAATTGCTAA

Coding sequence (CDS)

ATGACAGCCAGTGTGTTTTGTTCAACTTGGGATGCTAATAAGCCCTTGAATTGGCGCAAACACTACGGTTGGACTGCCTTTTGCGGCCCCGTCGGTCCATCAGGCCGAGATTCTTGTGGTCGATGCCTTAGGGTGAGAAACACAGAAACAGGAGATGAAGAAACAGTAAGAATTGTGGATCAATGCAGCAATGGTGGGTTAGATTTGGACTTTGGTGTTTTTCAAAAATTGGACACTAATGGAAATGGCTTTGCTCGTGGTCATCTTATAGTTGATTACCGCTTTGTTAATTGCTAA

Protein sequence

MTASVFCSTWDANKPLNWRKHYGWTAFCGPVGPSGRDSCGRCLRVRNTETGDEETVRIVDQCSNGGLDLDFGVFQKLDTNGNGFARGHLIVDYRFVNC*

Homology

[Close]

BLAST of Chy5G102470 vs. ExPASy Swiss-Prot
Match: P09761 (Wound-induced protein WIN1 OS=Solanum tuberosum OX=4113 GN=WIN1 PE=2 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 3.9e-42
Identity = 72/95 (75.79%), Postives = 84/95 (88.42%), Query Frame = 0


Query: 4   SVFCSTWDANKPLNWRKHYGWTAFCGPVGPSGRDSCGRCLRVRNTETGDEETVRIVDQCS 63
           S +CSTWDANKPL+WRK YGWTAFCGPVGP GRDSCG+CLRV NT TG + TVRIVDQCS
Sbjct: 103 SAYCSTWDANKPLSWRKKYGWTAFCGPVGPRGRDSCGKCLRVTNTRTGAQTTVRIVDQCS 162

Query: 64  NGGLDLDFGVFQKLDTNGNGFARGHLIVDYRFVNC 99
           NGGLDLD  VF+++DT+GNG  +GHLIV+Y+FV+C
Sbjct: 163 NGGLDLDVNVFRQIDTDGNGNHQGHLIVNYQFVDC 197

[Close]

BLAST of Chy5G102470 vs. ExPASy Swiss-Prot
Match: P29063 (Pathogenesis-related protein PR-4B OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 1.9e-41
Identity = 72/96 (75.00%), Postives = 81/96 (84.38%), Query Frame = 0


Query: 3   ASVFCSTWDANKPLNWRKHYGWTAFCGPVGPSGRDSCGRCLRVRNTETGDEETVRIVDQC 62
           AS FC+TWDA+KPL WR+ YGWTAFCGP GP G+DSCGRCLRV NT TG + TVRIVDQC
Sbjct: 50  ASAFCATWDADKPLAWRQKYGWTAFCGPAGPRGQDSCGRCLRVTNTGTGTQATVRIVDQC 109

Query: 63  SNGGLDLDFGVFQKLDTNGNGFARGHLIVDYRFVNC 99
           SNGGLDLD  VF +LDTNG G+ +GHLIV+Y FVNC
Sbjct: 110 SNGGLDLDVNVFNQLDTNGLGYQQGHLIVNYEFVNC 145

[Close]

BLAST of Chy5G102470 vs. ExPASy Swiss-Prot
Match: P83343 (Pathogenesis-related protein PR-4 (Fragment) OS=Prunus persica OX=3760 PE=2 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 4.3e-41
Identity = 72/97 (74.23%), Postives = 84/97 (86.60%), Query Frame = 0


Query: 2   TASVFCSTWDANKPLNWRKHYGWTAFCGPVGPSGRDSCGRCLRVRNTETGDEETVRIVDQ 61
           TASVFC+TWDA+KPL+WR  YGWTAFCGPVGP+G+DSCG+CL V NT TG + TVRIVDQ
Sbjct: 9   TASVFCATWDADKPLSWRSKYGWTAFCGPVGPTGQDSCGKCLLVTNTGTGAKVTVRIVDQ 68

Query: 62  CSNGGLDLDFGVFQKLDTNGNGFARGHLIVDYRFVNC 99
           CSNGGLDLD  VF ++DTNG G A+GHLIV+Y FV+C
Sbjct: 69  CSNGGLDLDVNVFNQIDTNGQGNAQGHLIVNYDFVDC 105

[Close]

BLAST of Chy5G102470 vs. ExPASy Swiss-Prot
Match: P32045 (Pathogenesis-related protein P2 OS=Solanum lycopersicum OX=4081 PE=2 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 5.7e-41
Identity = 71/97 (73.20%), Postives = 82/97 (84.54%), Query Frame = 0


Query: 2   TASVFCSTWDANKPLNWRKHYGWTAFCGPVGPSGRDSCGRCLRVRNTETGDEETVRIVDQ 61
           TASV+C+TWDA+KPL WR+ YGWTAFCGP GP+G+ SCGRCLRV NT TG +ETVRIVDQ
Sbjct: 47  TASVYCATWDADKPLEWRRRYGWTAFCGPAGPTGQASCGRCLRVTNTGTGTQETVRIVDQ 106

Query: 62  CSNGGLDLDFGVFQKLDTNGNGFARGHLIVDYRFVNC 99
           C NGGLDLD  VF +LDTNG G+ RG+L V+Y FVNC
Sbjct: 107 CRNGGLDLDVNVFNRLDTNGLGYQRGNLNVNYEFVNC 143

[Close]

BLAST of Chy5G102470 vs. ExPASy Swiss-Prot
Match: P29062 (Pathogenesis-related protein PR-4A OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 7.4e-41
Identity = 71/96 (73.96%), Postives = 80/96 (83.33%), Query Frame = 0


Query: 3   ASVFCSTWDANKPLNWRKHYGWTAFCGPVGPSGRDSCGRCLRVRNTETGDEETVRIVDQC 62
           AS FC+TWDA+KPL WR+ YGWTAFCGP GP G+DSCGRCLRV NT TG + TVRIVDQC
Sbjct: 50  ASAFCATWDADKPLAWRQKYGWTAFCGPAGPRGQDSCGRCLRVTNTGTGTQTTVRIVDQC 109

Query: 63  SNGGLDLDFGVFQKLDTNGNGFARGHLIVDYRFVNC 99
           SNGGLDLD  VF +LDTNG G+ +GHL V+Y FVNC
Sbjct: 110 SNGGLDLDVNVFNQLDTNGVGYQQGHLTVNYEFVNC 145

[Close]

BLAST of Chy5G102470 vs. ExPASy TrEMBL
Match: A0A0A0LJA9 (Barwin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G010370 PE=4 SV=1)

HSP 1 Score: 221.1 bits (562), Expect = 2.1e-54
Identity = 97/98 (98.98%), Postives = 98/98 (100.00%), Query Frame = 0


Query: 1   MTASVFCSTWDANKPLNWRKHYGWTAFCGPVGPSGRDSCGRCLRVRNTETGDEETVRIVD 60
           MTASVFCSTWDANKPLNWRKHYGWTAFCGPVGPSGR+SCGRCLRVRNTETGDEETVRIVD
Sbjct: 47  MTASVFCSTWDANKPLNWRKHYGWTAFCGPVGPSGRNSCGRCLRVRNTETGDEETVRIVD 106

Query: 61  QCSNGGLDLDFGVFQKLDTNGNGFARGHLIVDYRFVNC 99
           QCSNGGLDLDFGVFQKLDTNGNGFARGHLIVDYRFVNC
Sbjct: 107 QCSNGGLDLDFGVFQKLDTNGNGFARGHLIVDYRFVNC 144

[Close]

BLAST of Chy5G102470 vs. ExPASy TrEMBL
Match: A0A5D3D4G1 (Pathogenesis-related protein PR-4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456G001520 PE=4 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 1.3e-51
Identity = 91/98 (92.86%), Postives = 96/98 (97.96%), Query Frame = 0


Query: 1  MTASVFCSTWDANKPLNWRKHYGWTAFCGPVGPSGRDSCGRCLRVRNTETGDEETVRIVD 60
          MTASVFC+TWDANKPLNWRKHYGWTAFCGPVGP+GRDSCGRCLRVRNTETGDEETVRIVD
Sbjct: 1  MTASVFCATWDANKPLNWRKHYGWTAFCGPVGPTGRDSCGRCLRVRNTETGDEETVRIVD 60

Query: 61 QCSNGGLDLDFGVFQKLDTNGNGFARGHLIVDYRFVNC 99
          QCSNGGLDLD+ VF+KLD+NGNGFARGHLIVDY FVNC
Sbjct: 61 QCSNGGLDLDYDVFKKLDSNGNGFARGHLIVDYHFVNC 98

[Close]

BLAST of Chy5G102470 vs. ExPASy TrEMBL
Match: A0A5A7VCZ9 (Pathogenesis-related protein PR-4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold329G001120 PE=4 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 1.3e-51
Identity = 91/98 (92.86%), Postives = 96/98 (97.96%), Query Frame = 0


Query: 1   MTASVFCSTWDANKPLNWRKHYGWTAFCGPVGPSGRDSCGRCLRVRNTETGDEETVRIVD 60
           MTASVFC+TWDANKPLNWRKHYGWTAFCGPVGP+GRDSCGRCLRVRNTETGDEETVRIVD
Sbjct: 46  MTASVFCATWDANKPLNWRKHYGWTAFCGPVGPTGRDSCGRCLRVRNTETGDEETVRIVD 105

Query: 61  QCSNGGLDLDFGVFQKLDTNGNGFARGHLIVDYRFVNC 99
           QCSNGGLDLD+ VF+KLD+NGNGFARGHLIVDY FVNC
Sbjct: 106 QCSNGGLDLDYDVFKKLDSNGNGFARGHLIVDYHFVNC 143

[Close]

BLAST of Chy5G102470 vs. ExPASy TrEMBL
Match: A0A1S3C2E2 (pathogenesis-related protein PR-4-like OS=Cucumis melo OX=3656 GN=LOC103496086 PE=4 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 1.4e-50
Identity = 90/98 (91.84%), Postives = 94/98 (95.92%), Query Frame = 0


Query: 1  MTASVFCSTWDANKPLNWRKHYGWTAFCGPVGPSGRDSCGRCLRVRNTETGDEETVRIVD 60
          MTASVFC+TWDANKPLNWRKHYGWTAFCG VGP+GRDSCGRCLRVRNTETGDEETVRIVD
Sbjct: 1  MTASVFCATWDANKPLNWRKHYGWTAFCGSVGPTGRDSCGRCLRVRNTETGDEETVRIVD 60

Query: 61 QCSNGGLDLDFGVFQKLDTNGNGFARGHLIVDYRFVNC 99
          QCSNGGLDLD+ VF+KLD NGNGFARGHLIVDY FVNC
Sbjct: 61 QCSNGGLDLDYDVFKKLDNNGNGFARGHLIVDYHFVNC 98

[Close]

BLAST of Chy5G102470 vs. ExPASy TrEMBL
Match: A0A0A0LIC8 (Barwin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G010390 PE=4 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 5.3e-42
Identity = 76/98 (77.55%), Postives = 86/98 (87.76%), Query Frame = 0


Query: 1   MTASVFCSTWDANKPLNWRKHYGWTAFCGPVGPSGRDSCGRCLRVRNTETGDEETVRIVD 60
           + ASVFC+TWDA+KPL WR+ YGWTAFCGPVGP GRDSCGRCLRV NTETG  E VRIVD
Sbjct: 45  LRASVFCATWDADKPLEWRRQYGWTAFCGPVGPRGRDSCGRCLRVTNTETGASEIVRIVD 104

Query: 61  QCSNGGLDLDFGVFQKLDTNGNGFARGHLIVDYRFVNC 99
           QC+NGGLDLD  VF+++DTNGNG  RGHLIV+Y+FVNC
Sbjct: 105 QCANGGLDLDVNVFRRIDTNGNGNLRGHLIVNYQFVNC 142

[Close]

BLAST of Chy5G102470 vs. NCBI nr
Match: XP_004139241.1 (pathogenesis-related protein PR-4 [Cucumis sativus] >KGN60802.1 hypothetical protein Csa_019189 [Cucumis sativus])

HSP 1 Score: 219 bits (558), Expect = 1.36e-71
Identity = 97/98 (98.98%), Postives = 98/98 (100.00%), Query Frame = 0


Query: 1   MTASVFCSTWDANKPLNWRKHYGWTAFCGPVGPSGRDSCGRCLRVRNTETGDEETVRIVD 60
           MTASVFCSTWDANKPLNWRKHYGWTAFCGPVGPSGR+SCGRCLRVRNTETGDEETVRIVD
Sbjct: 47  MTASVFCSTWDANKPLNWRKHYGWTAFCGPVGPSGRNSCGRCLRVRNTETGDEETVRIVD 106

Query: 61  QCSNGGLDLDFGVFQKLDTNGNGFARGHLIVDYRFVNC 98
           QCSNGGLDLDFGVFQKLDTNGNGFARGHLIVDYRFVNC
Sbjct: 107 QCSNGGLDLDFGVFQKLDTNGNGFARGHLIVDYRFVNC 144

[Close]

BLAST of Chy5G102470 vs. NCBI nr
Match: TYK18426.1 (pathogenesis-related protein PR-4-like [Cucumis melo var. makuwa])

HSP 1 Score: 210 bits (534), Expect = 1.39e-68
Identity = 91/98 (92.86%), Postives = 96/98 (97.96%), Query Frame = 0


Query: 1  MTASVFCSTWDANKPLNWRKHYGWTAFCGPVGPSGRDSCGRCLRVRNTETGDEETVRIVD 60
          MTASVFC+TWDANKPLNWRKHYGWTAFCGPVGP+GRDSCGRCLRVRNTETGDEETVRIVD
Sbjct: 1  MTASVFCATWDANKPLNWRKHYGWTAFCGPVGPTGRDSCGRCLRVRNTETGDEETVRIVD 60

Query: 61 QCSNGGLDLDFGVFQKLDTNGNGFARGHLIVDYRFVNC 98
          QCSNGGLDLD+ VF+KLD+NGNGFARGHLIVDY FVNC
Sbjct: 61 QCSNGGLDLDYDVFKKLDSNGNGFARGHLIVDYHFVNC 98

[Close]

BLAST of Chy5G102470 vs. NCBI nr
Match: KAA0063601.1 (pathogenesis-related protein PR-4-like [Cucumis melo var. makuwa])

HSP 1 Score: 210 bits (534), Expect = 6.00e-68
Identity = 91/98 (92.86%), Postives = 96/98 (97.96%), Query Frame = 0


Query: 1   MTASVFCSTWDANKPLNWRKHYGWTAFCGPVGPSGRDSCGRCLRVRNTETGDEETVRIVD 60
           MTASVFC+TWDANKPLNWRKHYGWTAFCGPVGP+GRDSCGRCLRVRNTETGDEETVRIVD
Sbjct: 46  MTASVFCATWDANKPLNWRKHYGWTAFCGPVGPTGRDSCGRCLRVRNTETGDEETVRIVD 105

Query: 61  QCSNGGLDLDFGVFQKLDTNGNGFARGHLIVDYRFVNC 98
           QCSNGGLDLD+ VF+KLD+NGNGFARGHLIVDY FVNC
Sbjct: 106 QCSNGGLDLDYDVFKKLDSNGNGFARGHLIVDYHFVNC 143

[Close]

BLAST of Chy5G102470 vs. NCBI nr
Match: XP_008456038.1 (PREDICTED: pathogenesis-related protein PR-4-like [Cucumis melo])

HSP 1 Score: 206 bits (525), Expect = 3.29e-67
Identity = 90/98 (91.84%), Postives = 94/98 (95.92%), Query Frame = 0


Query: 1  MTASVFCSTWDANKPLNWRKHYGWTAFCGPVGPSGRDSCGRCLRVRNTETGDEETVRIVD 60
          MTASVFC+TWDANKPLNWRKHYGWTAFCG VGP+GRDSCGRCLRVRNTETGDEETVRIVD
Sbjct: 1  MTASVFCATWDANKPLNWRKHYGWTAFCGSVGPTGRDSCGRCLRVRNTETGDEETVRIVD 60

Query: 61 QCSNGGLDLDFGVFQKLDTNGNGFARGHLIVDYRFVNC 98
          QCSNGGLDLD+ VF+KLD NGNGFARGHLIVDY FVNC
Sbjct: 61 QCSNGGLDLDYDVFKKLDNNGNGFARGHLIVDYHFVNC 98

[Close]

BLAST of Chy5G102470 vs. NCBI nr
Match: XP_038891021.1 (pathogenesis-related protein PR-4-like [Benincasa hispida])

HSP 1 Score: 204 bits (519), Expect = 1.16e-65
Identity = 87/98 (88.78%), Postives = 93/98 (94.90%), Query Frame = 0


Query: 1   MTASVFCSTWDANKPLNWRKHYGWTAFCGPVGPSGRDSCGRCLRVRNTETGDEETVRIVD 60
           +TASV+C+TWDANKPLNWR HYGWTAFCGP GP+GRDSCG CLRVRNTETGDEETVRIVD
Sbjct: 46  LTASVYCATWDANKPLNWRSHYGWTAFCGPAGPTGRDSCGCCLRVRNTETGDEETVRIVD 105

Query: 61  QCSNGGLDLDFGVFQKLDTNGNGFARGHLIVDYRFVNC 98
           QCSNGGLDLD+GVFQKLDTNGNGFA GHL+VDY FVNC
Sbjct: 106 QCSNGGLDLDYGVFQKLDTNGNGFAHGHLLVDYHFVNC 143

[Close]

BLAST of Chy5G102470 vs. TAIR 10
Match: AT3G04720.1 (pathogenesis-related 4 )

HSP 1 Score: 155.6 bits (392), Expect = 2.1e-38
Identity = 64/95 (67.37%), Postives = 77/95 (81.05%), Query Frame = 0


Query: 4   SVFCSTWDANKPLNWRKHYGWTAFCGPVGPSGRDSCGRCLRVRNTETGDEETVRIVDQCS 63
           S +CSTWDA+KP  WR  YGWTAFCGP GP G+ SCG+CLRV+NT T    TVRIVDQCS
Sbjct: 97  SAYCSTWDADKPYAWRSKYGWTAFCGPAGPRGQASCGKCLRVKNTRTNAAVTVRIVDQCS 156

Query: 64  NGGLDLDFGVFQKLDTNGNGFARGHLIVDYRFVNC 99
           NGGLDLD  +F ++DT+G G+ +GHLIVDY+FV+C
Sbjct: 157 NGGLDLDVAMFNQIDTDGFGYQQGHLIVDYQFVDC 191

The following BLAST results are available for this feature:

BLAST of Chy5G102470 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P09761	3.9e-42	75.79	Wound-induced protein WIN1 OS=Solanum tuberosum OX=4113 GN=WIN1 PE=2 SV=1	[more]
P29063	1.9e-41	75.00	Pathogenesis-related protein PR-4B OS=Nicotiana tabacum OX=4097 PE=2 SV=1	[more]
P83343	4.3e-41	74.23	Pathogenesis-related protein PR-4 (Fragment) OS=Prunus persica OX=3760 PE=2 SV=1	[more]
P32045	5.7e-41	73.20	Pathogenesis-related protein P2 OS=Solanum lycopersicum OX=4081 PE=2 SV=1	[more]
P29062	7.4e-41	73.96	Pathogenesis-related protein PR-4A OS=Nicotiana tabacum OX=4097 PE=2 SV=1	[more]

BLAST of Chy5G102470 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LJA9	2.1e-54	98.98	Barwin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G010370 PE=4...	[more]
A0A5D3D4G1	1.3e-51	92.86	Pathogenesis-related protein PR-4-like OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A5A7VCZ9	1.3e-51	92.86	Pathogenesis-related protein PR-4-like OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A1S3C2E2	1.4e-50	91.84	pathogenesis-related protein PR-4-like OS=Cucumis melo OX=3656 GN=LOC103496086 P...	[more]
A0A0A0LIC8	5.3e-42	77.55	Barwin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G010390 PE=4...	[more]

BLAST of Chy5G102470 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004139241.1	1.36e-71	98.98	pathogenesis-related protein PR-4 [Cucumis sativus] >KGN60802.1 hypothetical pro...	[more]
TYK18426.1	1.39e-68	92.86	pathogenesis-related protein PR-4-like [Cucumis melo var. makuwa]	[more]
KAA0063601.1	6.00e-68	92.86	pathogenesis-related protein PR-4-like [Cucumis melo var. makuwa]	[more]
XP_008456038.1	3.29e-67	91.84	PREDICTED: pathogenesis-related protein PR-4-like [Cucumis melo]	[more]
XP_038891021.1	1.16e-65	88.78	pathogenesis-related protein PR-4-like [Benincasa hispida]	[more]

BLAST of Chy5G102470 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G04720.1	2.1e-38	67.37	pathogenesis-related 4	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001153	Barwin domain	PRINTS	PR00602	BARWIN	coord: 73..97 score: 62.13 coord: 52..70 score: 80.35 coord: 14..32 score: 78.6 coord: 33..51 score: 64.56
IPR001153	Barwin domain	PFAM	PF00967	Barwin	coord: 2..98 e-value: 5.7E-44 score: 148.8
IPR001153	Barwin domain	PROSITE	PS51174	BARWIN_3	coord: 1..98 score: 61.036449
IPR036908	RlpA-like domain superfamily	GENE3D	2.40.40.10		coord: 1..98 e-value: 1.9E-43 score: 149.3
IPR036908	RlpA-like domain superfamily	SUPERFAMILY	50685	Barwin-like endoglucanases	coord: 2..98
IPR044301	Pathogenesis-related protein-4	PANTHER	PTHR46351	WOUND-INDUCED PROTEIN WIN2	coord: 3..98
None	No IPR available	PANTHER	PTHR46351:SF3	WOUND-INDUCED PROTEIN WIN2	coord: 3..98
IPR018226	Barwin, conserved site	PROSITE	PS00771	BARWIN_1	coord: 39..47

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy5G102470.1	Chy5G102470.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042742	defense response to bacterium
biological_process	GO:0050832	defense response to fungus
biological_process	GO:0090501	RNA phosphodiester bond hydrolysis
biological_process	GO:0006952	defense response
molecular_function	GO:0004540	ribonuclease activity