Chy5G102460 (gene) Cucumber (hystrix) v1

Overview


Name	Chy5G102460
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	pathogenesis-related protein PR-4-like
Location	chrH05: 16471195 .. 16471808 (+)
RNA-Seq Expression	Chy5G102460
Synteny	Chy5G102460

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGAAAGGAAGTATTGTGATGATATTGTTGTTGGCTTTGGGGGTTTTGAGCTTAGCAAATGCTCAAAGTGCCACAAATGTAAGAGCTACTTATCATTTGTATAACCCACAAAACATCAATTGGGACTACATTAAGGCAAGTGTTTATTGTGCAACATGGGATGCTAACAAGCCTTTGGAGTGGCGTCGTCGGTACGATTGGACTGCTTTCTGCGGCCCGGTTGGCCCTCGTGGTCAAGCTTCTTGTGGACGTTGTTTGAAGGTAATTAAATCTTATTCTCGTTGACGGTGAAGATTTTGTATAAATGCATTTTTTAAAATTTTCTTCATCCCTACAAAATCGTCATGTTTTAAAAGTAACCTTAAATTAAAGTTCGCTTAATCCTATATCGTGATCAAGAAGAAAATTCTTTAAGTTGATAAATTTTAATGGGATGTAACATGTAGGTGACTAACGTTGAAACGAAAGCTTCAACAATAGTGAGAATTGTTGATCAATGCTCCAACGGAGGGTTAGATTTGGATATAAAACCATTTAAGGCGATTGACACCAATGGAAATGGATACAAAAATGGCCATCTTAAGGTCAACTATGAGTTTGTCAATTGCTAA

mRNA sequence

ATGGAGAAAGGAAGTATTGTGATGATATTGTTGTTGGCTTTGGGGGTTTTGAGCTTAGCAAATGCTCAAAGTGCCACAAATGTAAGAGCTACTTATCATTTGTATAACCCACAAAACATCAATTGGGACTACATTAAGGCAAGTGTTTATTGTGCAACATGGGATGCTAACAAGCCTTTGGAGTGGCGTCGTCGGTACGATTGGACTGCTTTCTGCGGCCCGGTTGGCCCTCGTGGTCAAGCTTCTTGTGGACGTTGTTTGAAGGTGACTAACGTTGAAACGAAAGCTTCAACAATAGTGAGAATTGTTGATCAATGCTCCAACGGAGGGTTAGATTTGGATATAAAACCATTTAAGGCGATTGACACCAATGGAAATGGATACAAAAATGGCCATCTTAAGGTCAACTATGAGTTTGTCAATTGCTAA

Coding sequence (CDS)

ATGGAGAAAGGAAGTATTGTGATGATATTGTTGTTGGCTTTGGGGGTTTTGAGCTTAGCAAATGCTCAAAGTGCCACAAATGTAAGAGCTACTTATCATTTGTATAACCCACAAAACATCAATTGGGACTACATTAAGGCAAGTGTTTATTGTGCAACATGGGATGCTAACAAGCCTTTGGAGTGGCGTCGTCGGTACGATTGGACTGCTTTCTGCGGCCCGGTTGGCCCTCGTGGTCAAGCTTCTTGTGGACGTTGTTTGAAGGTGACTAACGTTGAAACGAAAGCTTCAACAATAGTGAGAATTGTTGATCAATGCTCCAACGGAGGGTTAGATTTGGATATAAAACCATTTAAGGCGATTGACACCAATGGAAATGGATACAAAAATGGCCATCTTAAGGTCAACTATGAGTTTGTCAATTGCTAA

Protein sequence

MEKGSIVMILLLALGVLSLANAQSATNVRATYHLYNPQNINWDYIKASVYCATWDANKPLEWRRRYDWTAFCGPVGPRGQASCGRCLKVTNVETKASTIVRIVDQCSNGGLDLDIKPFKAIDTNGNGYKNGHLKVNYEFVNC*

Homology

[Close]

BLAST of Chy5G102460 vs. ExPASy Swiss-Prot
Match: P32045 (Pathogenesis-related protein P2 OS=Solanum lycopersicum OX=4081 PE=2 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 5.8e-55
Identity = 95/127 (74.80%), Postives = 105/127 (82.68%), Query Frame = 0


Query: 16  VLSLANAQSATNVRATYHLYNPQNINWDYIKASVYCATWDANKPLEWRRRYDWTAFCGPV 75
           ++++A AQSATNVRATYHLYNPQNINWD   ASVYCATWDA+KPLEWRRRY WTAFCGP 
Sbjct: 17  MMAVAAAQSATNVRATYHLYNPQNINWDLRTASVYCATWDADKPLEWRRRYGWTAFCGPA 76

Query: 76  GPRGQASCGRCLKVTNVETKASTIVRIVDQCSNGGLDLDIKPFKAIDTNGNGYKNGHLKV 135
           GP GQASCGRCL+VTN  T     VRIVDQC NGGLDLD+  F  +DTNG GY+ G+L V
Sbjct: 77  GPTGQASCGRCLRVTNTGTGTQETVRIVDQCRNGGLDLDVNVFNRLDTNGLGYQRGNLNV 136

Query: 136 NYEFVNC 143
           NYEFVNC
Sbjct: 137 NYEFVNC 143

[Close]

BLAST of Chy5G102460 vs. ExPASy Swiss-Prot
Match: P29062 (Pathogenesis-related protein PR-4A OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 1.7e-54
Identity = 95/137 (69.34%), Postives = 110/137 (80.29%), Query Frame = 0


Query: 6   IVMILLLALGVLSLANAQSATNVRATYHLYNPQNINWDYIKASVYCATWDANKPLEWRRR 65
           + + LL+   V+++A AQSATNVR+TYHLYNPQNINWD   AS +CATWDA+KPL WR++
Sbjct: 9   LCVALLIISMVMAMAAAQSATNVRSTYHLYNPQNINWDLRAASAFCATWDADKPLAWRQK 68

Query: 66  YDWTAFCGPVGPRGQASCGRCLKVTNVETKASTIVRIVDQCSNGGLDLDIKPFKAIDTNG 125
           Y WTAFCGP GPRGQ SCGRCL+VTN  T   T VRIVDQCSNGGLDLD+  F  +DTNG
Sbjct: 69  YGWTAFCGPAGPRGQDSCGRCLRVTNTGTGTQTTVRIVDQCSNGGLDLDVNVFNQLDTNG 128

Query: 126 NGYKNGHLKVNYEFVNC 143
            GY+ GHL VNYEFVNC
Sbjct: 129 VGYQQGHLTVNYEFVNC 145

[Close]

BLAST of Chy5G102460 vs. ExPASy Swiss-Prot
Match: P29063 (Pathogenesis-related protein PR-4B OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 2.4e-53
Identity = 93/137 (67.88%), Postives = 109/137 (79.56%), Query Frame = 0


Query: 6   IVMILLLALGVLSLANAQSATNVRATYHLYNPQNINWDYIKASVYCATWDANKPLEWRRR 65
           + + LL+   ++++A AQSATNVR+TYHLYNPQNINWD   AS +CATWDA+KPL WR++
Sbjct: 9   LCVALLIMSVMMAMAAAQSATNVRSTYHLYNPQNINWDLRAASAFCATWDADKPLAWRQK 68

Query: 66  YDWTAFCGPVGPRGQASCGRCLKVTNVETKASTIVRIVDQCSNGGLDLDIKPFKAIDTNG 125
           Y WTAFCGP GPRGQ SCGRCL+VTN  T     VRIVDQCSNGGLDLD+  F  +DTNG
Sbjct: 69  YGWTAFCGPAGPRGQDSCGRCLRVTNTGTGTQATVRIVDQCSNGGLDLDVNVFNQLDTNG 128

Query: 126 NGYKNGHLKVNYEFVNC 143
            GY+ GHL VNYEFVNC
Sbjct: 129 LGYQQGHLIVNYEFVNC 145

[Close]

BLAST of Chy5G102460 vs. ExPASy Swiss-Prot
Match: P09761 (Wound-induced protein WIN1 OS=Solanum tuberosum OX=4113 GN=WIN1 PE=2 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 1.9e-50
Identity = 84/119 (70.59%), Postives = 97/119 (81.51%), Query Frame = 0


Query: 24  SATNVRATYHLYNPQNINWDYIKASVYCATWDANKPLEWRRRYDWTAFCGPVGPRGQASC 83
           SA NVRATYH+YNPQN+ WD    S YC+TWDANKPL WR++Y WTAFCGPVGPRG+ SC
Sbjct: 79  SAQNVRATYHIYNPQNVGWDLNAVSAYCSTWDANKPLSWRKKYGWTAFCGPVGPRGRDSC 138

Query: 84  GRCLKVTNVETKASTIVRIVDQCSNGGLDLDIKPFKAIDTNGNGYKNGHLKVNYEFVNC 143
           G+CL+VTN  T A T VRIVDQCSNGGLDLD+  F+ IDT+GNG   GHL VNY+FV+C
Sbjct: 139 GKCLRVTNTRTGAQTTVRIVDQCSNGGLDLDVNVFRQIDTDGNGNHQGHLIVNYQFVDC 197

[Close]

BLAST of Chy5G102460 vs. ExPASy Swiss-Prot
Match: P09762 (Wound-induced protein WIN2 OS=Solanum tuberosum OX=4113 GN=WIN2 PE=2 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 3.7e-49
Identity = 84/119 (70.59%), Postives = 95/119 (79.83%), Query Frame = 0


Query: 24  SATNVRATYHLYNPQNINWDYIKASVYCATWDANKPLEWRRRYDWTAFCGPVGPRGQASC 83
           SA NVRATYH+YNPQN+ WD    S YC+TWDANKP  WR +Y WTAFCGPVGPRG+ SC
Sbjct: 78  SAQNVRATYHIYNPQNVGWDLNAVSAYCSTWDANKPYAWRSKYGWTAFCGPVGPRGRDSC 137

Query: 84  GRCLKVTNVETKASTIVRIVDQCSNGGLDLDIKPFKAIDTNGNGYKNGHLKVNYEFVNC 143
           G+CL+VTN  T A T VRIVDQCSNGGLDLDI  F+ IDT+G G + GHL VNY+FVNC
Sbjct: 138 GKCLRVTNTRTGAQTTVRIVDQCSNGGLDLDINVFQQIDTDGVGNQQGHLIVNYQFVNC 196

[Close]

BLAST of Chy5G102460 vs. ExPASy TrEMBL
Match: A0A0A0LG76 (Barwin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G010380 PE=4 SV=1)

HSP 1 Score: 299.7 bits (766), Expect = 6.6e-78
Identity = 140/142 (98.59%), Postives = 141/142 (99.30%), Query Frame = 0


Query: 1   MEKGSIVMILLLALGVLSLANAQSATNVRATYHLYNPQNINWDYIKASVYCATWDANKPL 60
           MEKGSIVMILLLALGVLSLANAQSATNVRATYHLYNPQNINWDY+KASVYCATWDANKPL
Sbjct: 1   MEKGSIVMILLLALGVLSLANAQSATNVRATYHLYNPQNINWDYMKASVYCATWDANKPL 60

Query: 61  EWRRRYDWTAFCGPVGPRGQASCGRCLKVTNVETKASTIVRIVDQCSNGGLDLDIKPFKA 120
           EWRRRYDWTAFCGPVGPRGQASCGRCLKVTNVETKAST VRIVDQCSNGGLDLDIKPFKA
Sbjct: 61  EWRRRYDWTAFCGPVGPRGQASCGRCLKVTNVETKASTTVRIVDQCSNGGLDLDIKPFKA 120

Query: 121 IDTNGNGYKNGHLKVNYEFVNC 143
           IDTNGNGYKNGHLKVNYEFVNC
Sbjct: 121 IDTNGNGYKNGHLKVNYEFVNC 142

[Close]

BLAST of Chy5G102460 vs. ExPASy TrEMBL
Match: A0A5D3D4G8 (Pathogenesis-related protein PR-4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456G001500 PE=4 SV=1)

HSP 1 Score: 258.5 bits (659), Expect = 1.7e-65
Identity = 118/142 (83.10%), Postives = 130/142 (91.55%), Query Frame = 0


Query: 1   MEKGSIVMILLLALGVLSLANAQSATNVRATYHLYNPQNINWDYIKASVYCATWDANKPL 60
           MEKGSI+MIL+LALGVLSLANAQSATNVRATYHLYNPQ+INWDY++ASV+CATWDANKPL
Sbjct: 1   MEKGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDANKPL 60

Query: 61  EWRRRYDWTAFCGPVGPRGQASCGRCLKVTNVETKASTIVRIVDQCSNGGLDLDIKPFKA 120
           EWRRRY WTAFCGPVGPRG+ SCGRCL+VTN ET AS IVRIVDQC+NGGLDLD+  F+ 
Sbjct: 61  EWRRRYGWTAFCGPVGPRGRDSCGRCLRVTNTETGASEIVRIVDQCANGGLDLDVNVFRR 120

Query: 121 IDTNGNGYKNGHLKVNYEFVNC 143
           IDTNGNG   GHL VNY+FVNC
Sbjct: 121 IDTNGNGNFRGHLTVNYQFVNC 142

[Close]

BLAST of Chy5G102460 vs. ExPASy TrEMBL
Match: A0A1S3C3H6 (pathogenesis-related protein PR-4-like OS=Cucumis melo OX=3656 GN=LOC103496070 PE=4 SV=1)

HSP 1 Score: 258.5 bits (659), Expect = 1.7e-65
Identity = 118/142 (83.10%), Postives = 130/142 (91.55%), Query Frame = 0


Query: 1   MEKGSIVMILLLALGVLSLANAQSATNVRATYHLYNPQNINWDYIKASVYCATWDANKPL 60
           MEKGSI+MIL+LALGVLSLANAQSATNVRATYHLYNPQ+INWDY++ASV+CATWDANKPL
Sbjct: 1   MEKGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDANKPL 60

Query: 61  EWRRRYDWTAFCGPVGPRGQASCGRCLKVTNVETKASTIVRIVDQCSNGGLDLDIKPFKA 120
           EWRRRY WTAFCGPVGPRG+ SCGRCL+VTN ET AS IVRIVDQC+NGGLDLD+  F+ 
Sbjct: 61  EWRRRYGWTAFCGPVGPRGRDSCGRCLRVTNTETGASEIVRIVDQCANGGLDLDVNVFRR 120

Query: 121 IDTNGNGYKNGHLKVNYEFVNC 143
           IDTNGNG   GHL VNY+FVNC
Sbjct: 121 IDTNGNGNFRGHLTVNYQFVNC 142

[Close]

BLAST of Chy5G102460 vs. ExPASy TrEMBL
Match: A0A6J1K9X1 (pathogenesis-related protein PR-4-like OS=Cucurbita maxima OX=3661 GN=LOC111493583 PE=4 SV=1)

HSP 1 Score: 256.1 bits (653), Expect = 8.4e-65
Identity = 116/142 (81.69%), Postives = 128/142 (90.14%), Query Frame = 0


Query: 1   MEKGSIVMILLLALGVLSLANAQSATNVRATYHLYNPQNINWDYIKASVYCATWDANKPL 60
           MEKGS +MIL LALG+LSLANAQSA NVRATYHLYNPQ+INWDY++ASV+CATWDANKP+
Sbjct: 1   MEKGSFLMILALALGILSLANAQSANNVRATYHLYNPQDINWDYLRASVFCATWDANKPI 60

Query: 61  EWRRRYDWTAFCGPVGPRGQASCGRCLKVTNVETKASTIVRIVDQCSNGGLDLDIKPFKA 120
           EWRR+Y WTAFCGPVGPRGQASCGRCL+VTN ET AS IVRIVDQC+NGGLDLD+  FK 
Sbjct: 61  EWRRQYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIVRIVDQCANGGLDLDVNVFKR 120

Query: 121 IDTNGNGYKNGHLKVNYEFVNC 143
           IDTNGNG   GHL VNY+FVNC
Sbjct: 121 IDTNGNGVFRGHLIVNYQFVNC 142

[Close]

BLAST of Chy5G102460 vs. ExPASy TrEMBL
Match: A0A6J1KIN7 (pathogenesis-related protein P2-like OS=Cucurbita maxima OX=3661 GN=LOC111493584 PE=4 SV=1)

HSP 1 Score: 255.4 bits (651), Expect = 1.4e-64
Identity = 115/142 (80.99%), Postives = 128/142 (90.14%), Query Frame = 0


Query: 1   MEKGSIVMILLLALGVLSLANAQSATNVRATYHLYNPQNINWDYIKASVYCATWDANKPL 60
           M+KG  +M+L LALG+LSL NAQSA NVRATYHLYNPQ+INWDY++ASVYCATWDANKPL
Sbjct: 1   MDKGRFLMLLALALGILSLVNAQSANNVRATYHLYNPQDINWDYLRASVYCATWDANKPL 60

Query: 61  EWRRRYDWTAFCGPVGPRGQASCGRCLKVTNVETKASTIVRIVDQCSNGGLDLDIKPFKA 120
           E+RRRY WTAFCGPVGPRGQASCGRCL+VTN ETKAS IVRIVDQCSNGGLDLD+  F+ 
Sbjct: 61  EFRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETKASEIVRIVDQCSNGGLDLDVNVFRR 120

Query: 121 IDTNGNGYKNGHLKVNYEFVNC 143
           IDTNGNGY+ GHL V YEFV+C
Sbjct: 121 IDTNGNGYRRGHLIVKYEFVSC 142

[Close]

BLAST of Chy5G102460 vs. NCBI nr
Match: XP_004139237.1 (pathogenesis-related protein PR-4A [Cucumis sativus] >KGN60803.1 hypothetical protein Csa_019268 [Cucumis sativus])

HSP 1 Score: 297 bits (761), Expect = 8.59e-102
Identity = 140/142 (98.59%), Postives = 141/142 (99.30%), Query Frame = 0


Query: 1   MEKGSIVMILLLALGVLSLANAQSATNVRATYHLYNPQNINWDYIKASVYCATWDANKPL 60
           MEKGSIVMILLLALGVLSLANAQSATNVRATYHLYNPQNINWDY+KASVYCATWDANKPL
Sbjct: 1   MEKGSIVMILLLALGVLSLANAQSATNVRATYHLYNPQNINWDYMKASVYCATWDANKPL 60

Query: 61  EWRRRYDWTAFCGPVGPRGQASCGRCLKVTNVETKASTIVRIVDQCSNGGLDLDIKPFKA 120
           EWRRRYDWTAFCGPVGPRGQASCGRCLKVTNVETKAST VRIVDQCSNGGLDLDIKPFKA
Sbjct: 61  EWRRRYDWTAFCGPVGPRGQASCGRCLKVTNVETKASTTVRIVDQCSNGGLDLDIKPFKA 120

Query: 121 IDTNGNGYKNGHLKVNYEFVNC 142
           IDTNGNGYKNGHLKVNYEFVNC
Sbjct: 121 IDTNGNGYKNGHLKVNYEFVNC 142

[Close]

BLAST of Chy5G102460 vs. NCBI nr
Match: XP_038890575.1 (pathogenesis-related protein PR-4-like [Benincasa hispida])

HSP 1 Score: 265 bits (676), Expect = 7.92e-89
Identity = 122/142 (85.92%), Postives = 131/142 (92.25%), Query Frame = 0


Query: 1   MEKGSIVMILLLALGVLSLANAQSATNVRATYHLYNPQNINWDYIKASVYCATWDANKPL 60
           MEKGSI+MIL+LALGVLS+ANAQSA NVRATYHLYNPQNINWDY++ASVYCATWDANKPL
Sbjct: 1   MEKGSIMMILVLALGVLSMANAQSANNVRATYHLYNPQNINWDYLRASVYCATWDANKPL 60

Query: 61  EWRRRYDWTAFCGPVGPRGQASCGRCLKVTNVETKASTIVRIVDQCSNGGLDLDIKPFKA 120
           EWRRRY WTAFCGPVGPRGQASCGRCL+VTN ET ASTIVRIVDQCSNGGLDLD+  FK 
Sbjct: 61  EWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETGASTIVRIVDQCSNGGLDLDVNVFKQ 120

Query: 121 IDTNGNGYKNGHLKVNYEFVNC 142
           +DTNGNG   GHL VNY+FVNC
Sbjct: 121 LDTNGNGNFRGHLTVNYQFVNC 142

[Close]

BLAST of Chy5G102460 vs. NCBI nr
Match: XP_023521169.1 (pathogenesis-related protein P2-like [Cucurbita pepo subsp. pepo] >XP_023547312.1 pathogenesis-related protein P2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 258 bits (659), Expect = 3.10e-86
Identity = 117/142 (82.39%), Postives = 131/142 (92.25%), Query Frame = 0


Query: 1   MEKGSIVMILLLALGVLSLANAQSATNVRATYHLYNPQNINWDYIKASVYCATWDANKPL 60
           M+KG  +M+L LALG+LSLANAQSATNVRATYHLYNPQ+INWDY++ASV+CATWDANKPL
Sbjct: 1   MDKGRFLMLLALALGILSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDANKPL 60

Query: 61  EWRRRYDWTAFCGPVGPRGQASCGRCLKVTNVETKASTIVRIVDQCSNGGLDLDIKPFKA 120
           E+RRRY WTAFCGPVGPRGQASCGRCL+VTN ETKAS IVRIVDQCSNGGLDLD+  F+ 
Sbjct: 61  EFRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETKASEIVRIVDQCSNGGLDLDVNVFRR 120

Query: 121 IDTNGNGYKNGHLKVNYEFVNC 142
           IDTNGNGY+ GHL VNY+FVNC
Sbjct: 121 IDTNGNGYRRGHLIVNYQFVNC 142

[Close]

BLAST of Chy5G102460 vs. NCBI nr
Match: XP_008456018.1 (PREDICTED: pathogenesis-related protein PR-4-like [Cucumis melo] >KAA0063603.1 pathogenesis-related protein PR-4-like [Cucumis melo var. makuwa] >TYK18424.1 pathogenesis-related protein PR-4-like [Cucumis melo var. makuwa])

HSP 1 Score: 256 bits (654), Expect = 1.79e-85
Identity = 118/142 (83.10%), Postives = 130/142 (91.55%), Query Frame = 0


Query: 1   MEKGSIVMILLLALGVLSLANAQSATNVRATYHLYNPQNINWDYIKASVYCATWDANKPL 60
           MEKGSI+MIL+LALGVLSLANAQSATNVRATYHLYNPQ+INWDY++ASV+CATWDANKPL
Sbjct: 1   MEKGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDANKPL 60

Query: 61  EWRRRYDWTAFCGPVGPRGQASCGRCLKVTNVETKASTIVRIVDQCSNGGLDLDIKPFKA 120
           EWRRRY WTAFCGPVGPRG+ SCGRCL+VTN ET AS IVRIVDQC+NGGLDLD+  F+ 
Sbjct: 61  EWRRRYGWTAFCGPVGPRGRDSCGRCLRVTNTETGASEIVRIVDQCANGGLDLDVNVFRR 120

Query: 121 IDTNGNGYKNGHLKVNYEFVNC 142
           IDTNGNG   GHL VNY+FVNC
Sbjct: 121 IDTNGNGNFRGHLTVNYQFVNC 142

[Close]

BLAST of Chy5G102460 vs. NCBI nr
Match: XP_022999102.1 (pathogenesis-related protein PR-4-like [Cucurbita maxima] >XP_023521168.1 pathogenesis-related protein PR-4-like [Cucurbita pepo subsp. pepo] >XP_023547311.1 pathogenesis-related protein PR-4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 254 bits (648), Expect = 1.47e-84
Identity = 116/142 (81.69%), Postives = 128/142 (90.14%), Query Frame = 0


Query: 1   MEKGSIVMILLLALGVLSLANAQSATNVRATYHLYNPQNINWDYIKASVYCATWDANKPL 60
           MEKGS +MIL LALG+LSLANAQSA NVRATYHLYNPQ+INWDY++ASV+CATWDANKP+
Sbjct: 1   MEKGSFLMILALALGILSLANAQSANNVRATYHLYNPQDINWDYLRASVFCATWDANKPI 60

Query: 61  EWRRRYDWTAFCGPVGPRGQASCGRCLKVTNVETKASTIVRIVDQCSNGGLDLDIKPFKA 120
           EWRR+Y WTAFCGPVGPRGQASCGRCL+VTN ET AS IVRIVDQC+NGGLDLD+  FK 
Sbjct: 61  EWRRQYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIVRIVDQCANGGLDLDVNVFKR 120

Query: 121 IDTNGNGYKNGHLKVNYEFVNC 142
           IDTNGNG   GHL VNY+FVNC
Sbjct: 121 IDTNGNGVFRGHLIVNYQFVNC 142

[Close]

BLAST of Chy5G102460 vs. TAIR 10
Match: AT3G04720.1 (pathogenesis-related 4 )

HSP 1 Score: 187.6 bits (475), Expect = 7.1e-48
Identity = 79/120 (65.83%), Postives = 93/120 (77.50%), Query Frame = 0


Query: 23  QSATNVRATYHLYNPQNINWDYIKASVYCATWDANKPLEWRRRYDWTAFCGPVGPRGQAS 82
           +SA+NVRATYH YNP   NWD    S YC+TWDA+KP  WR +Y WTAFCGP GPRGQAS
Sbjct: 72  ESASNVRATYHFYNPAQNNWDLRAVSAYCSTWDADKPYAWRSKYGWTAFCGPAGPRGQAS 131

Query: 83  CGRCLKVTNVETKASTIVRIVDQCSNGGLDLDIKPFKAIDTNGNGYKNGHLKVNYEFVNC 142
           CG+CL+V N  T A+  VRIVDQCSNGGLDLD+  F  IDT+G GY+ GHL V+Y+FV+C
Sbjct: 132 CGKCLRVKNTRTNAAVTVRIVDQCSNGGLDLDVAMFNQIDTDGFGYQQGHLIVDYQFVDC 191

The following BLAST results are available for this feature:

BLAST of Chy5G102460 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P32045	5.8e-55	74.80	Pathogenesis-related protein P2 OS=Solanum lycopersicum OX=4081 PE=2 SV=1	[more]
P29062	1.7e-54	69.34	Pathogenesis-related protein PR-4A OS=Nicotiana tabacum OX=4097 PE=2 SV=1	[more]
P29063	2.4e-53	67.88	Pathogenesis-related protein PR-4B OS=Nicotiana tabacum OX=4097 PE=2 SV=1	[more]
P09761	1.9e-50	70.59	Wound-induced protein WIN1 OS=Solanum tuberosum OX=4113 GN=WIN1 PE=2 SV=1	[more]
P09762	3.7e-49	70.59	Wound-induced protein WIN2 OS=Solanum tuberosum OX=4113 GN=WIN2 PE=2 SV=1	[more]

BLAST of Chy5G102460 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LG76	6.6e-78	98.59	Barwin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G010380 PE=4...	[more]
A0A5D3D4G8	1.7e-65	83.10	Pathogenesis-related protein PR-4-like OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A1S3C3H6	1.7e-65	83.10	pathogenesis-related protein PR-4-like OS=Cucumis melo OX=3656 GN=LOC103496070 P...	[more]
A0A6J1K9X1	8.4e-65	81.69	pathogenesis-related protein PR-4-like OS=Cucurbita maxima OX=3661 GN=LOC1114935...	[more]
A0A6J1KIN7	1.4e-64	80.99	pathogenesis-related protein P2-like OS=Cucurbita maxima OX=3661 GN=LOC111493584...	[more]

BLAST of Chy5G102460 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004139237.1	8.59e-102	98.59	pathogenesis-related protein PR-4A [Cucumis sativus] >KGN60803.1 hypothetical pr...	[more]
XP_038890575.1	7.92e-89	85.92	pathogenesis-related protein PR-4-like [Benincasa hispida]	[more]
XP_023521169.1	3.10e-86	82.39	pathogenesis-related protein P2-like [Cucurbita pepo subsp. pepo] >XP_023547312....	[more]
XP_008456018.1	1.79e-85	83.10	PREDICTED: pathogenesis-related protein PR-4-like [Cucumis melo] >KAA0063603.1 p...	[more]
XP_022999102.1	1.47e-84	81.69	pathogenesis-related protein PR-4-like [Cucurbita maxima] >XP_023521168.1 pathog...	[more]

BLAST of Chy5G102460 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G04720.1	7.1e-48	65.83	pathogenesis-related 4	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001153	Barwin domain	PRINTS	PR00602	BARWIN	coord: 58..76 score: 74.04 coord: 77..95 score: 63.86 coord: 117..141 score: 62.67 coord: 96..114 score: 80.7
IPR001153	Barwin domain	PFAM	PF00967	Barwin	coord: 24..142 e-value: 2.6E-57 score: 191.9
IPR001153	Barwin domain	PROSITE	PS51174	BARWIN_3	coord: 23..142 score: 77.527336
IPR036908	RlpA-like domain superfamily	GENE3D	2.40.40.10		coord: 23..142 e-value: 2.3E-55 score: 187.7
IPR036908	RlpA-like domain superfamily	SUPERFAMILY	50685	Barwin-like endoglucanases	coord: 23..142
IPR044301	Pathogenesis-related protein-4	PANTHER	PTHR46351	WOUND-INDUCED PROTEIN WIN2	coord: 7..142
IPR018226	Barwin, conserved site	PROSITE	PS00772	BARWIN_2	coord: 135..142
IPR018226	Barwin, conserved site	PROSITE	PS00771	BARWIN_1	coord: 83..91

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy5G102460.1	Chy5G102460.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042742	defense response to bacterium
biological_process	GO:0050832	defense response to fungus
biological_process	GO:0090501	RNA phosphodiester bond hydrolysis
biological_process	GO:0006952	defense response
molecular_function	GO:0004540	ribonuclease activity