Chy5G102450 (gene) Cucumber (hystrix) v1

Overview
NameChy5G102450
Typegene
OrganismCucumis hystrix (Cucumber (hystrix) v1)
Descriptionpathogenesis-related protein PR-4-like
LocationchrH05: 16468741 .. 16469331 (+)
RNA-Seq ExpressionChy5G102450
SyntenyChy5G102450
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGAAAGGAAGTATTATGATGATATTGGTGTTGGCTTTGGGGGTTTTGAGCTTAGCAAATGCTCAAAGTGCCACAAATGTAAGGGCTACCTATCATTTGTACAACCCACAAGACATCAATTGGGACTACCTTAGGGCAAGTGTTTTTTGTGCAACATGGGATGCCGACAAGCCTTTGGAATGGCGTCGCCAATATGGTTGGACTGCCTTCTGTGGCCCTGTCGGTCCCCGTGGCCGTGATTCTTGTGGACGTTGTTTGAGGGTAAGTAAATCTTTTAGTTGACGAGCTTTTCATTAATGCATTATATTTTCATCATTTACGAAAATCCTCATGCGTTTGTAAATAACCTTAAAGCCATTTAATCTACCATAAAAAAGAAAAGAGAGTTTTTTAATTTGAGAAACTTTGATGGGTATAATGCAGGTGACTAACACTGAAACGAGAGCTTCGGAAATAGTGAGAATTGTTGATCAATGCGCGAATGGAGGGTTGGATTTAGATGTGAATGTGTTCAGGAGGATTGACACTAATGGAAATGGAAACTTCAGAGGCCATCTTATTGTCAACTATCAATTTGTCAATTGCTAA

mRNA sequence

ATGGAGAAAGGAAGTATTATGATGATATTGGTGTTGGCTTTGGGGGTTTTGAGCTTAGCAAATGCTCAAAGTGCCACAAATGTAAGGGCTACCTATCATTTGTACAACCCACAAGACATCAATTGGGACTACCTTAGGGCAAGTGTTTTTTGTGCAACATGGGATGCCGACAAGCCTTTGGAATGGCGTCGCCAATATGGTTGGACTGCCTTCTGTGGCCCTGTCGGTCCCCGTGGCCGTGATTCTTGTGGACGTTGTTTGAGGGTGACTAACACTGAAACGAGAGCTTCGGAAATAGTGAGAATTGTTGATCAATGCGCGAATGGAGGGTTGGATTTAGATGTGAATGTGTTCAGGAGGATTGACACTAATGGAAATGGAAACTTCAGAGGCCATCTTATTGTCAACTATCAATTTGTCAATTGCTAA

Coding sequence (CDS)

ATGGAGAAAGGAAGTATTATGATGATATTGGTGTTGGCTTTGGGGGTTTTGAGCTTAGCAAATGCTCAAAGTGCCACAAATGTAAGGGCTACCTATCATTTGTACAACCCACAAGACATCAATTGGGACTACCTTAGGGCAAGTGTTTTTTGTGCAACATGGGATGCCGACAAGCCTTTGGAATGGCGTCGCCAATATGGTTGGACTGCCTTCTGTGGCCCTGTCGGTCCCCGTGGCCGTGATTCTTGTGGACGTTGTTTGAGGGTGACTAACACTGAAACGAGAGCTTCGGAAATAGTGAGAATTGTTGATCAATGCGCGAATGGAGGGTTGGATTTAGATGTGAATGTGTTCAGGAGGATTGACACTAATGGAAATGGAAACTTCAGAGGCCATCTTATTGTCAACTATCAATTTGTCAATTGCTAA

Protein sequence

MEKGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDADKPLEWRRQYGWTAFCGPVGPRGRDSCGRCLRVTNTETRASEIVRIVDQCANGGLDLDVNVFRRIDTNGNGNFRGHLIVNYQFVNC*
Homology
[Close]
BLAST of Chy5G102450 vs. ExPASy Swiss-Prot
Match: P32045 (Pathogenesis-related protein P2 OS=Solanum lycopersicum OX=4081 PE=2 SV=1)

HSP 1 Score: 218.0 bits (554), Expect = 6.9e-56
Identity = 98/127 (77.17%), Postives = 109/127 (85.83%), Query Frame = 0 

Query: 16  VLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDADKPLEWRRQYGWTAFCGPV 75
           ++++A AQSATNVRATYHLYNPQ+INWD   ASV+CATWDADKPLEWRR+YGWTAFCGP 
Sbjct: 17  MMAVAAAQSATNVRATYHLYNPQNINWDLRTASVYCATWDADKPLEWRRRYGWTAFCGPA 76

Query: 76  GPRGRDSCGRCLRVTNTETRASEIVRIVDQCANGGLDLDVNVFRRIDTNGNGNFRGHLIV 135
           GP G+ SCGRCLRVTNT T   E VRIVDQC NGGLDLDVNVF R+DTNG G  RG+L V
Sbjct: 77  GPTGQASCGRCLRVTNTGTGTQETVRIVDQCRNGGLDLDVNVFNRLDTNGLGYQRGNLNV 136

Query: 136 NYQFVNC 143
           NY+FVNC
Sbjct: 137 NYEFVNC 143

[Close]
BLAST of Chy5G102450 vs. ExPASy Swiss-Prot
Match: P29063 (Pathogenesis-related protein PR-4B OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 217.6 bits (553), Expect = 9.0e-56
Identity = 97/137 (70.80%), Postives = 115/137 (83.94%), Query Frame = 0 

Query: 6   IMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDADKPLEWRRQ 65
           + + L++   ++++A AQSATNVR+TYHLYNPQ+INWD   AS FCATWDADKPL WR++
Sbjct: 9   LCVALLIMSVMMAMAAAQSATNVRSTYHLYNPQNINWDLRAASAFCATWDADKPLAWRQK 68

Query: 66  YGWTAFCGPVGPRGRDSCGRCLRVTNTETRASEIVRIVDQCANGGLDLDVNVFRRIDTNG 125
           YGWTAFCGP GPRG+DSCGRCLRVTNT T     VRIVDQC+NGGLDLDVNVF ++DTNG
Sbjct: 69  YGWTAFCGPAGPRGQDSCGRCLRVTNTGTGTQATVRIVDQCSNGGLDLDVNVFNQLDTNG 128

Query: 126 NGNFRGHLIVNYQFVNC 143
            G  +GHLIVNY+FVNC
Sbjct: 129 LGYQQGHLIVNYEFVNC 145

[Close]
BLAST of Chy5G102450 vs. ExPASy Swiss-Prot
Match: P29062 (Pathogenesis-related protein PR-4A OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 1.5e-55
Identity = 97/137 (70.80%), Postives = 114/137 (83.21%), Query Frame = 0 

Query: 6   IMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDADKPLEWRRQ 65
           + + L++   V+++A AQSATNVR+TYHLYNPQ+INWD   AS FCATWDADKPL WR++
Sbjct: 9   LCVALLIISMVMAMAAAQSATNVRSTYHLYNPQNINWDLRAASAFCATWDADKPLAWRQK 68

Query: 66  YGWTAFCGPVGPRGRDSCGRCLRVTNTETRASEIVRIVDQCANGGLDLDVNVFRRIDTNG 125
           YGWTAFCGP GPRG+DSCGRCLRVTNT T     VRIVDQC+NGGLDLDVNVF ++DTNG
Sbjct: 69  YGWTAFCGPAGPRGQDSCGRCLRVTNTGTGTQTTVRIVDQCSNGGLDLDVNVFNQLDTNG 128

Query: 126 NGNFRGHLIVNYQFVNC 143
            G  +GHL VNY+FVNC
Sbjct: 129 VGYQQGHLTVNYEFVNC 145

[Close]
BLAST of Chy5G102450 vs. ExPASy Swiss-Prot
Match: P09761 (Wound-induced protein WIN1 OS=Solanum tuberosum OX=4113 GN=WIN1 PE=2 SV=1)

HSP 1 Score: 214.5 bits (545), Expect = 7.6e-55
Identity = 91/119 (76.47%), Postives = 105/119 (88.24%), Query Frame = 0 

Query: 24  SATNVRATYHLYNPQDINWDYLRASVFCATWDADKPLEWRRQYGWTAFCGPVGPRGRDSC 83
           SA NVRATYH+YNPQ++ WD    S +C+TWDA+KPL WR++YGWTAFCGPVGPRGRDSC
Sbjct: 79  SAQNVRATYHIYNPQNVGWDLNAVSAYCSTWDANKPLSWRKKYGWTAFCGPVGPRGRDSC 138

Query: 84  GRCLRVTNTETRASEIVRIVDQCANGGLDLDVNVFRRIDTNGNGNFRGHLIVNYQFVNC 143
           G+CLRVTNT T A   VRIVDQC+NGGLDLDVNVFR+IDT+GNGN +GHLIVNYQFV+C
Sbjct: 139 GKCLRVTNTRTGAQTTVRIVDQCSNGGLDLDVNVFRQIDTDGNGNHQGHLIVNYQFVDC 197

[Close]
BLAST of Chy5G102450 vs. ExPASy Swiss-Prot
Match: P09762 (Wound-induced protein WIN2 OS=Solanum tuberosum OX=4113 GN=WIN2 PE=2 SV=1)

HSP 1 Score: 206.8 bits (525), Expect = 1.6e-52
Identity = 88/119 (73.95%), Postives = 102/119 (85.71%), Query Frame = 0 

Query: 24  SATNVRATYHLYNPQDINWDYLRASVFCATWDADKPLEWRRQYGWTAFCGPVGPRGRDSC 83
           SA NVRATYH+YNPQ++ WD    S +C+TWDA+KP  WR +YGWTAFCGPVGPRGRDSC
Sbjct: 78  SAQNVRATYHIYNPQNVGWDLNAVSAYCSTWDANKPYAWRSKYGWTAFCGPVGPRGRDSC 137

Query: 84  GRCLRVTNTETRASEIVRIVDQCANGGLDLDVNVFRRIDTNGNGNFRGHLIVNYQFVNC 143
           G+CLRVTNT T A   VRIVDQC+NGGLDLD+NVF++IDT+G GN +GHLIVNYQFVNC
Sbjct: 138 GKCLRVTNTRTGAQTTVRIVDQCSNGGLDLDINVFQQIDTDGVGNQQGHLIVNYQFVNC 196

[Close]
BLAST of Chy5G102450 vs. ExPASy TrEMBL
Match: A0A0A0LIC8 (Barwin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G010390 PE=4 SV=1)

HSP 1 Score: 294.3 bits (752), Expect = 2.8e-76
Identity = 139/142 (97.89%), Postives = 139/142 (97.89%), Query Frame = 0 

Query: 1   MEKGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDADKPL 60
           M KGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDADKPL
Sbjct: 1   MGKGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDADKPL 60

Query: 61  EWRRQYGWTAFCGPVGPRGRDSCGRCLRVTNTETRASEIVRIVDQCANGGLDLDVNVFRR 120
           EWRRQYGWTAFCGPVGPRGRDSCGRCLRVTNTET ASEIVRIVDQCANGGLDLDVNVFRR
Sbjct: 61  EWRRQYGWTAFCGPVGPRGRDSCGRCLRVTNTETGASEIVRIVDQCANGGLDLDVNVFRR 120

Query: 121 IDTNGNGNFRGHLIVNYQFVNC 143
           IDTNGNGN RGHLIVNYQFVNC
Sbjct: 121 IDTNGNGNLRGHLIVNYQFVNC 142

[Close]
BLAST of Chy5G102450 vs. ExPASy TrEMBL
Match: A0A5D3D4G8 (Pathogenesis-related protein PR-4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456G001500 PE=4 SV=1)

HSP 1 Score: 293.9 bits (751), Expect = 3.6e-76
Identity = 138/142 (97.18%), Postives = 140/142 (98.59%), Query Frame = 0 

Query: 1   MEKGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDADKPL 60
           MEKGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDA+KPL
Sbjct: 1   MEKGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDANKPL 60

Query: 61  EWRRQYGWTAFCGPVGPRGRDSCGRCLRVTNTETRASEIVRIVDQCANGGLDLDVNVFRR 120
           EWRR+YGWTAFCGPVGPRGRDSCGRCLRVTNTET ASEIVRIVDQCANGGLDLDVNVFRR
Sbjct: 61  EWRRRYGWTAFCGPVGPRGRDSCGRCLRVTNTETGASEIVRIVDQCANGGLDLDVNVFRR 120

Query: 121 IDTNGNGNFRGHLIVNYQFVNC 143
           IDTNGNGNFRGHL VNYQFVNC
Sbjct: 121 IDTNGNGNFRGHLTVNYQFVNC 142

[Close]
BLAST of Chy5G102450 vs. ExPASy TrEMBL
Match: A0A1S3C3H6 (pathogenesis-related protein PR-4-like OS=Cucumis melo OX=3656 GN=LOC103496070 PE=4 SV=1)

HSP 1 Score: 293.9 bits (751), Expect = 3.6e-76
Identity = 138/142 (97.18%), Postives = 140/142 (98.59%), Query Frame = 0 

Query: 1   MEKGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDADKPL 60
           MEKGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDA+KPL
Sbjct: 1   MEKGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDANKPL 60

Query: 61  EWRRQYGWTAFCGPVGPRGRDSCGRCLRVTNTETRASEIVRIVDQCANGGLDLDVNVFRR 120
           EWRR+YGWTAFCGPVGPRGRDSCGRCLRVTNTET ASEIVRIVDQCANGGLDLDVNVFRR
Sbjct: 61  EWRRRYGWTAFCGPVGPRGRDSCGRCLRVTNTETGASEIVRIVDQCANGGLDLDVNVFRR 120

Query: 121 IDTNGNGNFRGHLIVNYQFVNC 143
           IDTNGNGNFRGHL VNYQFVNC
Sbjct: 121 IDTNGNGNFRGHLTVNYQFVNC 142

[Close]
BLAST of Chy5G102450 vs. ExPASy TrEMBL
Match: A0A6J1K9X1 (pathogenesis-related protein PR-4-like OS=Cucurbita maxima OX=3661 GN=LOC111493583 PE=4 SV=1)

HSP 1 Score: 280.8 bits (717), Expect = 3.2e-72
Identity = 130/142 (91.55%), Postives = 136/142 (95.77%), Query Frame = 0 

Query: 1   MEKGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDADKPL 60
           MEKGS +MIL LALG+LSLANAQSA NVRATYHLYNPQDINWDYLRASVFCATWDA+KP+
Sbjct: 1   MEKGSFLMILALALGILSLANAQSANNVRATYHLYNPQDINWDYLRASVFCATWDANKPI 60

Query: 61  EWRRQYGWTAFCGPVGPRGRDSCGRCLRVTNTETRASEIVRIVDQCANGGLDLDVNVFRR 120
           EWRRQYGWTAFCGPVGPRG+ SCGRCLRVTNTET ASEIVRIVDQCANGGLDLDVNVF+R
Sbjct: 61  EWRRQYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIVRIVDQCANGGLDLDVNVFKR 120

Query: 121 IDTNGNGNFRGHLIVNYQFVNC 143
           IDTNGNG FRGHLIVNYQFVNC
Sbjct: 121 IDTNGNGVFRGHLIVNYQFVNC 142

[Close]
BLAST of Chy5G102450 vs. ExPASy TrEMBL
Match: A0A6J1G2U1 (pathogenesis-related protein PR-4-like OS=Cucurbita moschata OX=3662 GN=LOC111450306 PE=4 SV=1)

HSP 1 Score: 279.3 bits (713), Expect = 9.3e-72
Identity = 131/142 (92.25%), Postives = 136/142 (95.77%), Query Frame = 0 

Query: 1   MEKGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDADKPL 60
           MEK SI+MIL LALGVLSLANAQSA NVRATYHLYNPQDINWDYLRASVFCATWDA+KP+
Sbjct: 1   MEKVSILMILALALGVLSLANAQSANNVRATYHLYNPQDINWDYLRASVFCATWDANKPI 60

Query: 61  EWRRQYGWTAFCGPVGPRGRDSCGRCLRVTNTETRASEIVRIVDQCANGGLDLDVNVFRR 120
           EWRRQYGWTAFCGPVGPRG+ SCGRCLRVTNTET ASEIVRIVDQCANGGLDLDVNVF+R
Sbjct: 61  EWRRQYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIVRIVDQCANGGLDLDVNVFKR 120

Query: 121 IDTNGNGNFRGHLIVNYQFVNC 143
           IDTNGNG FRGHLIVNYQFVNC
Sbjct: 121 IDTNGNGVFRGHLIVNYQFVNC 142

[Close]
BLAST of Chy5G102450 vs. NCBI nr
Match: XP_004139239.1 (pathogenesis-related protein PR-4 [Cucumis sativus] >KGN60804.1 hypothetical protein Csa_019369 [Cucumis sativus])

HSP 1 Score: 290 bits (743), Expect = 4.79e-99
Identity = 139/142 (97.89%), Postives = 139/142 (97.89%), Query Frame = 0 

Query: 1   MEKGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDADKPL 60
           M KGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDADKPL
Sbjct: 1   MGKGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDADKPL 60

Query: 61  EWRRQYGWTAFCGPVGPRGRDSCGRCLRVTNTETRASEIVRIVDQCANGGLDLDVNVFRR 120
           EWRRQYGWTAFCGPVGPRGRDSCGRCLRVTNTET ASEIVRIVDQCANGGLDLDVNVFRR
Sbjct: 61  EWRRQYGWTAFCGPVGPRGRDSCGRCLRVTNTETGASEIVRIVDQCANGGLDLDVNVFRR 120

Query: 121 IDTNGNGNFRGHLIVNYQFVNC 142
           IDTNGNGN RGHLIVNYQFVNC
Sbjct: 121 IDTNGNGNLRGHLIVNYQFVNC 142

[Close]
BLAST of Chy5G102450 vs. NCBI nr
Match: XP_008456018.1 (PREDICTED: pathogenesis-related protein PR-4-like [Cucumis melo] >KAA0063603.1 pathogenesis-related protein PR-4-like [Cucumis melo var. makuwa] >TYK18424.1 pathogenesis-related protein PR-4-like [Cucumis melo var. makuwa])

HSP 1 Score: 290 bits (742), Expect = 6.80e-99
Identity = 138/142 (97.18%), Postives = 140/142 (98.59%), Query Frame = 0 

Query: 1   MEKGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDADKPL 60
           MEKGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDA+KPL
Sbjct: 1   MEKGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDANKPL 60

Query: 61  EWRRQYGWTAFCGPVGPRGRDSCGRCLRVTNTETRASEIVRIVDQCANGGLDLDVNVFRR 120
           EWRR+YGWTAFCGPVGPRGRDSCGRCLRVTNTET ASEIVRIVDQCANGGLDLDVNVFRR
Sbjct: 61  EWRRRYGWTAFCGPVGPRGRDSCGRCLRVTNTETGASEIVRIVDQCANGGLDLDVNVFRR 120

Query: 121 IDTNGNGNFRGHLIVNYQFVNC 142
           IDTNGNGNFRGHL VNYQFVNC
Sbjct: 121 IDTNGNGNFRGHLTVNYQFVNC 142

[Close]
BLAST of Chy5G102450 vs. NCBI nr
Match: XP_022999102.1 (pathogenesis-related protein PR-4-like [Cucurbita maxima] >XP_023521168.1 pathogenesis-related protein PR-4-like [Cucurbita pepo subsp. pepo] >XP_023547311.1 pathogenesis-related protein PR-4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 277 bits (708), Expect = 1.04e-93
Identity = 130/142 (91.55%), Postives = 136/142 (95.77%), Query Frame = 0 

Query: 1   MEKGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDADKPL 60
           MEKGS +MIL LALG+LSLANAQSA NVRATYHLYNPQDINWDYLRASVFCATWDA+KP+
Sbjct: 1   MEKGSFLMILALALGILSLANAQSANNVRATYHLYNPQDINWDYLRASVFCATWDANKPI 60

Query: 61  EWRRQYGWTAFCGPVGPRGRDSCGRCLRVTNTETRASEIVRIVDQCANGGLDLDVNVFRR 120
           EWRRQYGWTAFCGPVGPRG+ SCGRCLRVTNTET ASEIVRIVDQCANGGLDLDVNVF+R
Sbjct: 61  EWRRQYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIVRIVDQCANGGLDLDVNVFKR 120

Query: 121 IDTNGNGNFRGHLIVNYQFVNC 142
           IDTNGNG FRGHLIVNYQFVNC
Sbjct: 121 IDTNGNGVFRGHLIVNYQFVNC 142

[Close]
BLAST of Chy5G102450 vs. NCBI nr
Match: XP_022946136.1 (pathogenesis-related protein PR-4-like [Cucurbita moschata])

HSP 1 Score: 275 bits (704), Expect = 4.25e-93
Identity = 131/142 (92.25%), Postives = 136/142 (95.77%), Query Frame = 0 

Query: 1   MEKGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDADKPL 60
           MEK SI+MIL LALGVLSLANAQSA NVRATYHLYNPQDINWDYLRASVFCATWDA+KP+
Sbjct: 1   MEKVSILMILALALGVLSLANAQSANNVRATYHLYNPQDINWDYLRASVFCATWDANKPI 60

Query: 61  EWRRQYGWTAFCGPVGPRGRDSCGRCLRVTNTETRASEIVRIVDQCANGGLDLDVNVFRR 120
           EWRRQYGWTAFCGPVGPRG+ SCGRCLRVTNTET ASEIVRIVDQCANGGLDLDVNVF+R
Sbjct: 61  EWRRQYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIVRIVDQCANGGLDLDVNVFKR 120

Query: 121 IDTNGNGNFRGHLIVNYQFVNC 142
           IDTNGNG FRGHLIVNYQFVNC
Sbjct: 121 IDTNGNGVFRGHLIVNYQFVNC 142

[Close]
BLAST of Chy5G102450 vs. NCBI nr
Match: KAG6599312.1 (hypothetical protein SDJN03_09090, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 273 bits (697), Expect = 4.97e-92
Identity = 129/142 (90.85%), Postives = 135/142 (95.07%), Query Frame = 0 

Query: 1   MEKGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDADKPL 60
           MEK S +MIL LALGVLSLANAQSA NVRATYHLYNPQDINWDYLRASVFCATWDA+KP+
Sbjct: 1   MEKVSFLMILALALGVLSLANAQSANNVRATYHLYNPQDINWDYLRASVFCATWDANKPI 60

Query: 61  EWRRQYGWTAFCGPVGPRGRDSCGRCLRVTNTETRASEIVRIVDQCANGGLDLDVNVFRR 120
           EWRRQYGWTAFCGPVGPRG+ SCGRCLRVTNTET +SEIVRIVDQCANGGLDLDVNVF+R
Sbjct: 61  EWRRQYGWTAFCGPVGPRGQASCGRCLRVTNTETGSSEIVRIVDQCANGGLDLDVNVFKR 120

Query: 121 IDTNGNGNFRGHLIVNYQFVNC 142
           IDTNGNG FRGHLIVNYQFVNC
Sbjct: 121 IDTNGNGVFRGHLIVNYQFVNC 142

[Close]
BLAST of Chy5G102450 vs. TAIR 10
Match: AT3G04720.1 (pathogenesis-related 4 )

HSP 1 Score: 188.3 bits (477), Expect = 4.1e-48
Identity = 81/120 (67.50%), Postives = 96/120 (80.00%), Query Frame = 0 

Query: 23  QSATNVRATYHLYNPQDINWDYLRASVFCATWDADKPLEWRRQYGWTAFCGPVGPRGRDS 82
           +SA+NVRATYH YNP   NWD    S +C+TWDADKP  WR +YGWTAFCGP GPRG+ S
Sbjct: 72  ESASNVRATYHFYNPAQNNWDLRAVSAYCSTWDADKPYAWRSKYGWTAFCGPAGPRGQAS 131

Query: 83  CGRCLRVTNTETRASEIVRIVDQCANGGLDLDVNVFRRIDTNGNGNFRGHLIVNYQFVNC 142
           CG+CLRV NT T A+  VRIVDQC+NGGLDLDV +F +IDT+G G  +GHLIV+YQFV+C
Sbjct: 132 CGKCLRVKNTRTNAAVTVRIVDQCSNGGLDLDVAMFNQIDTDGFGYQQGHLIVDYQFVDC 191

The following BLAST results are available for this feature:
BLAST of Chy5G102450 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P320456.9e-5677.17Pathogenesis-related protein P2 OS=Solanum lycopersicum OX=4081 PE=2 SV=1[more]
P290639.0e-5670.80Pathogenesis-related protein PR-4B OS=Nicotiana tabacum OX=4097 PE=2 SV=1[more]
P290621.5e-5570.80Pathogenesis-related protein PR-4A OS=Nicotiana tabacum OX=4097 PE=2 SV=1[more]
P097617.6e-5576.47Wound-induced protein WIN1 OS=Solanum tuberosum OX=4113 GN=WIN1 PE=2 SV=1[more]
P097621.6e-5273.95Wound-induced protein WIN2 OS=Solanum tuberosum OX=4113 GN=WIN2 PE=2 SV=1[more]
BLAST of Chy5G102450 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LIC82.8e-7697.89Barwin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G010390 PE=4... [more]
A0A5D3D4G83.6e-7697.18Pathogenesis-related protein PR-4-like OS=Cucumis melo var. makuwa OX=1194695 GN... [more]
A0A1S3C3H63.6e-7697.18pathogenesis-related protein PR-4-like OS=Cucumis melo OX=3656 GN=LOC103496070 P... [more]
A0A6J1K9X13.2e-7291.55pathogenesis-related protein PR-4-like OS=Cucurbita maxima OX=3661 GN=LOC1114935... [more]
A0A6J1G2U19.3e-7292.25pathogenesis-related protein PR-4-like OS=Cucurbita moschata OX=3662 GN=LOC11145... [more]
BLAST of Chy5G102450 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004139239.14.79e-9997.89pathogenesis-related protein PR-4 [Cucumis sativus] >KGN60804.1 hypothetical pro... [more]
XP_008456018.16.80e-9997.18PREDICTED: pathogenesis-related protein PR-4-like [Cucumis melo] >KAA0063603.1 p... [more]
XP_022999102.11.04e-9391.55pathogenesis-related protein PR-4-like [Cucurbita maxima] >XP_023521168.1 pathog... [more]
XP_022946136.14.25e-9392.25pathogenesis-related protein PR-4-like [Cucurbita moschata][more]
KAG6599312.14.97e-9290.85hypothetical protein SDJN03_09090, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of Chy5G102450 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G04720.14.1e-4867.50pathogenesis-related 4 [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001153Barwin domainPRINTSPR00602BARWINcoord: 58..76
score: 78.95
coord: 96..114
score: 77.19
coord: 117..141
score: 67.2
coord: 77..95
score: 67.02
IPR001153Barwin domainPFAMPF00967Barwincoord: 24..142
e-value: 1.9E-56
score: 189.1
IPR001153Barwin domainPROSITEPS51174BARWIN_3coord: 23..142
score: 78.076218
IPR036908RlpA-like domain superfamilyGENE3D2.40.40.10coord: 23..142
e-value: 3.1E-54
score: 184.0
IPR036908RlpA-like domain superfamilySUPERFAMILY50685Barwin-like endoglucanasescoord: 23..142
IPR044301Pathogenesis-related protein-4PANTHERPTHR46351WOUND-INDUCED PROTEIN WIN2coord: 7..142
IPR018226Barwin, conserved sitePROSITEPS00772BARWIN_2coord: 135..142
IPR018226Barwin, conserved sitePROSITEPS00771BARWIN_1coord: 83..91

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Chy5G102450.1Chy5G102450.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042742 defense response to bacterium
biological_process GO:0050832 defense response to fungus
biological_process GO:0090501 RNA phosphodiester bond hydrolysis
biological_process GO:0006952 defense response
molecular_function GO:0004540 ribonuclease activity