Chy5G102310 (gene) Cucumber (hystrix) v1

Overview


Name	Chy5G102310
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	PITH domain-containing protein
Location	chrH05: 16347917 .. 16351481 (+)
RNA-Seq Expression	Chy5G102310
Synteny	Chy5G102310

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGCCAAAGAAGTAGAATATGGAATCGGGCTGTCGGGTTTGACCCAACCACATTCCGGGTCAAGGAGGAGATTCCTAACGGACCTTTCCGCCCCGACGCTACCAATTTTGAGAGCATTCGGAGTTTGCTTTACAAAGAATTCATTCCTATTTCCCTCTTTTTCCCTTTCTCTTCTCCTTCGGTTACCTATGGCTACCGCATCTGCCGCATCTGCCGCATCTGCCACATCTGCCACCGCTATTCATCGGAATCAGGTCAGTGATTCAAGTTCTTACGGCCTTCGGTTCACAATTTCTTGCTTAATTCGTCGGGATATGATTAGTGATGGTGTTAATACTTGAATCAGTCGATTGAGTTTTTGAGGATGGATTTTATTGCTTTAAGTTTGGTTTTGTTCGTTATACTGATGCTTTGTTTTTAACCAGGTTGATCTGTCCGACTTCATTAACTGGTCTGGTGTCGAGTGTCTCAACCAGAATTTTAGCCATACTTTTACAAATGCTCTTAATCAGGTGCTGTTTGTTATTATTTTGACTAGAGTTGTTTATTAGTTGCAAGTACTTCATTGCAGTTGTTTTGAGTTTCTTTACATAGTTTAATAATTAATTTCTTGATTTAATGAAGTTGAAGATGGTGCTGAGTTAGACTTGTGTTGTTGCCGATTGTAATTTACTTATCTCTTTCTTTCCTTCTGATTGCAAATCTTTTTTATGTTTAATATCTTCTTGAAAAGCTTTATGTGAGAATGGTATGGAGGAGGGATTGGGGTTTGCATTTGCCGTGATGGGAAGTTGGAGGTTGGGATAGGTATATGGAAGTTGGCGAATGTTTTATGAACCAAGTTGGTGAATATTACCCTTTGAAAGCAGATGTTGGTCTGGTCATTATTAATTCGTAACTACCACCTTTCCTCTCATGTTTGTTGATTTTTTATTTTCAATTTGGCAGACCTGTTTGTGATATTGAGTTACAAGTGTCATGTCTTTCTCTACTTTTAGTAATACGTGTTGTTGGGTTCTTCAGTCATGTGGCTCTGGCATTTTTTGTTTTTAACCCCTCGTCTTCCTCTTTCACTTTGATTTGAGGCTAAATCTCAAAGAAGATTAAGTTATTGCCTAAATGGTTTCTTTGGGAAAATTAAATGCACACTTTAGACTTTGTTGAAAATCCGTCATCTATGGTTCTGGGATTTCAGTGGTGTGTGTTGCATATGAAAACAATACAAGATAAAGATAGAGATGTCACTTTTTCGTGAAACATAGAATTGACTTTTGCATGTGTTTGGAGTCAGTTTGACTATACTCCCAAAGACTGTAGGGATGTAGCGAAGGTGCTTGTTAAACCCAGATTTCTATGATAAGGGTCTAAATCATTGGCAAAAGTTTTGCCAAGTGTGTTTGACTTAGTGGTATTAGCATGACCTTTGTCTCTAGAGGTTTGAACACCTTGCAATTGTTGTAAACAAAATCATTGGCAAAAATTTTGTTTGCTATTTTGTTGAAACCATGCCTCGAAAGAAACGAATTATGTTAAGGGCAGTCTTTAGATAGATTTGGAGTGTTAATTTCTCTCTGCTCTGGTATTCTGGTCTAATGTATTATGGAGTTATTCTTTTTATTTTTATTTTTAATTCTTAACTATCGGACCAACCTATTGAAATTTTGTTTTTAGATTGCTTATTTGTTTGGATCTATATTTTAGGCCACTTCTTTTGTTTTTAAGATTTATCAATAGTATGAGAACGAAATTCATATATTTTAAGGTACAAGGTCTAAAATAAAACAAGTCTCAAAGTAGAGGATCCAAAATGATATTATATCCTAAAAGAAAATCTTCATGATAGAACAGTCTCTTTTTCTTCTTAATTTCTTCCCCAGCCAAGGGAAATTATTATACCGAGGGTTTAAATCAACCTTTTTCCTACATTAGACTTGTAGGGATAATGACAGCTTGCTTTTGGAGAGTGATGCAGATGAGCAGCTCTTGATATACATACCTTTTAACCAAGTCGTTAAATTGCATTCCTTGGTCATCAAGGGACCTGAAGAGGAAGGTTAGTACTCTACGCTACTTATTACTTCTAATCCATAGTTTCTTTTCTTCTGAATCTTTCATTAGTGCTTGTCATGTGTAATTAGGATTTACGTAACATGTCTTACAAATCCAACGTGGGCAATGAGGGTGTGATAATTCCACCTAAAATTTTTACTATTTGATTATTGTTATTTTGGGTTATTCACTCACTGCCCCTTGTTCCTCAACCTCGAGTTTGGAAGTGGATTATTGTGCTTTCTTGGCTTTCTATCAAAACATTTGTAATTATCTTGTCTTAATCACAATCAATTGCTAAGTTCTCTTTTCTAGTAATTCTTGGCTGTTGGATGATGTCTAATCCCTGCCCCTTAGTTACGCTTGTACCTCTGTTACCTCTTTATTTGAACAAATATATTGCAATCTCTCTTTTTAAATGGAAAAAATGTATTGCCATGGAATGGTGCAATCACTTAACCAGGAACGTGCACACTGTCTTTCACCTTTCTCTCCTTTTTTCTGCTTAATTTACAAATCACAGGATTCTAATTTTGAGGTTGTTCCCCAGGTCCTAGAACTGTAAAGCTTTTCTCAAACAAGGAGAATATGGGATTTGGGTAAACTAATTGTTTTCTTTAGTTAATATTTGGTGCAAATATTTTCTAAATATTATCAGTTGATGATTGTTTGTTTCATGAATAATGTTGCAGCAACGTCAATGACTACCCTCCTAGTGACACAATTGTGTTGTCCCCAGAAAATCTTACGGTAGATTTTCCCATACTTTAATCTGTATCTCATCAATAAATGGAAAACTCTTTCGAAGAGAATATACAAAGGAATGGAGAGATCATTGTTTTATTTTTTATGCTTTGTAGGGAAAGTCAGAGGTTGTGAAGTACGTGAAATTTCAAAATGTTCGTAGGTAAGTCATATTTGTCATCAATGTTAATTTCTTCATTCTGACCGTATGTTGAAAGTATTGGTTGATTGTTCTAAATAATTTACAATTCTTTTATCAGCTTGACAATTTTTATAGAGGATAACCAATCTGGAACTGACACTACAAAAATTCAAAAAATCGCCTTGTACGGAACAACGTAAGTTATCATATTCCATTTGAGTTAATTTTTAACGTCTATTTTTTCTTTGTGATGTTTTGATTGAATTACTCCTATATTATTGCACCCAACAAGCTTAGTTGATGTGAGGTTGTATTTTAGTTTCCTTGACTAATATATGAGTGATAAATATGAACTTACAACAAGAAAAGATGAGACTTTCGGATTATCTTTGTAAATTTCCATGCTGCTTTCATTCACCCTTACTTCAGTTGCCTAACAGATATTTTAAACCTCTTCACTTTCTTTTGTAGATTATTTAATTATAGCATACACGTTTTTTATTAGCAACGGTTATGTATTTTATTTTATTATTTCTTTATGTTTTGTGAAATATTGAAATCGTTGTTTTGTTCCTGCAGTGTTGAAACAACGGACATGAAGGGTCTGAAGAAGATTGAGGATCACTAA

mRNA sequence

ATGGGCCAAAGAAGTAGAATATGGAATCGGGCTGTCGGGTTTGACCCAACCACATTCCGGGTCAAGGAGGAGATTCCTAACGGACCTTTCCGCCCCGACGCTACCAATTTTGAGAGCATTCGGAGTTTGCTTTACAAAGAATTCATTCCTATTTCCCTCTTTTTCCCTTTCTCTTCTCCTTCGGTTGATCTGTCCGACTTCATTAACTGGTCTGGTGTCGAGTGTCTCAACCAGAATTTTAGCCATACTTTTACAAATGCTCTTAATCAGACTTGTAGGGATAATGACAGCTTGCTTTTGGAGAGTGATGCAGATGAGCAGCTCTTGATATACATACCTTTTAACCAAGTCGTTAAATTGCATTCCTTGGTCATCAAGGGACCTGAAGAGGAAGGTCCTAGAACTGTAAAGCTTTTCTCAAACAAGGAGAATATGGGATTTGGCAACGTCAATGACTACCCTCCTAGTGACACAATTGTGTTGTCCCCAGAAAATCTTACGGGAAAGTCAGAGGTTGTGAAGTACGTGAAATTTCAAAATGTTCGTAGCTTGACAATTTTTATAGAGGATAACCAATCTGGAACTGACACTACAAAAATTCAAAAAATCGCCTTGTACGGAACAACTGTTGAAACAACGGACATGAAGGGTCTGAAGAAGATTGAGGATCACTAA

Coding sequence (CDS)

ATGGGCCAAAGAAGTAGAATATGGAATCGGGCTGTCGGGTTTGACCCAACCACATTCCGGGTCAAGGAGGAGATTCCTAACGGACCTTTCCGCCCCGACGCTACCAATTTTGAGAGCATTCGGAGTTTGCTTTACAAAGAATTCATTCCTATTTCCCTCTTTTTCCCTTTCTCTTCTCCTTCGGTTGATCTGTCCGACTTCATTAACTGGTCTGGTGTCGAGTGTCTCAACCAGAATTTTAGCCATACTTTTACAAATGCTCTTAATCAGACTTGTAGGGATAATGACAGCTTGCTTTTGGAGAGTGATGCAGATGAGCAGCTCTTGATATACATACCTTTTAACCAAGTCGTTAAATTGCATTCCTTGGTCATCAAGGGACCTGAAGAGGAAGGTCCTAGAACTGTAAAGCTTTTCTCAAACAAGGAGAATATGGGATTTGGCAACGTCAATGACTACCCTCCTAGTGACACAATTGTGTTGTCCCCAGAAAATCTTACGGGAAAGTCAGAGGTTGTGAAGTACGTGAAATTTCAAAATGTTCGTAGCTTGACAATTTTTATAGAGGATAACCAATCTGGAACTGACACTACAAAAATTCAAAAAATCGCCTTGTACGGAACAACTGTTGAAACAACGGACATGAAGGGTCTGAAGAAGATTGAGGATCACTAA

Protein sequence

MGQRSRIWNRAVGFDPTTFRVKEEIPNGPFRPDATNFESIRSLLYKEFIPISLFFPFSSPSVDLSDFINWSGVECLNQNFSHTFTNALNQTCRDNDSLLLESDADEQLLIYIPFNQVVKLHSLVIKGPEEEGPRTVKLFSNKENMGFGNVNDYPPSDTIVLSPENLTGKSEVVKYVKFQNVRSLTIFIEDNQSGTDTTKIQKIALYGTTVETTDMKGLKKIEDH*

Homology

[Close]

BLAST of Chy5G102310 vs. ExPASy Swiss-Prot
Match: Q9SQZ9 (PITH domain-containing protein At3g04780 OS=Arabidopsis thaliana OX=3702 GN=At3g04780 PE=1 SV=2)

HSP 1 Score: 255.4 bits (651), Expect = 6.1e-67
Identity = 125/163 (76.69%), Postives = 141/163 (86.50%), Query Frame = 0


Query: 62  VDLSDFINWSGVECLNQNFSHTFTNALNQTCRDNDSLLLESDADEQLLIYIPFNQVVKLH 121
           VDL DFI+WSGVECLNQ+ SH+  NAL Q  R+++ L LESDADEQLLIYIPFNQV+KLH
Sbjct: 14  VDLLDFIDWSGVECLNQSSSHSLPNALKQGYREDEGLNLESDADEQLLIYIPFNQVIKLH 73

Query: 122 SLVIKGPEEEGPRTVKLFSNKENMGFGNVNDYPPSDTIVLSPENLTGKSEVVKYVKFQNV 181
           S  IKGPEEEGP+TVK FSNKE+M F NVND+PPSDT  L+ ENL GK  V+KYVKFQNV
Sbjct: 74  SFAIKGPEEEGPKTVKFFSNKEHMCFSNVNDFPPSDTAELTEENLKGKPVVLKYVKFQNV 133

Query: 182 RSLTIFIEDNQSGTDTTKIQKIALYGTTVETTDMKGLKKIEDH 225
           RSLTIFIE NQSG++ TK+QKIALYG+TVETTDMKGLKKIEDH
Sbjct: 134 RSLTIFIEANQSGSEVTKVQKIALYGSTVETTDMKGLKKIEDH 176

[Close]

BLAST of Chy5G102310 vs. ExPASy Swiss-Prot
Match: O43396 (Thioredoxin-like protein 1 OS=Homo sapiens OX=9606 GN=TXNL1 PE=1 SV=3)

HSP 1 Score: 120.9 bits (302), Expect = 1.8e-26
Identity = 67/163 (41.10%), Postives = 98/163 (60.12%), Query Frame = 0


Query: 62  VDLSDFINWSGVECLNQNFSHTFTNALNQTCRDNDSLLLESDADEQLLIYIPFNQVVKLH 121
           +DL  FIN +G ECLN++  H F N     C   D+  LESD DEQLLI + FNQ VKL+
Sbjct: 124 MDLMPFINKAGCECLNESDEHGFDN-----CLRKDTTFLESDCDEQLLITVAFNQPVKLY 183

Query: 122 SLVIKGPEE-EGPRTVKLFSN-KENMGFGNVNDYPPSDTIVLSPENLTGKSEV-VKYVKF 181
           S+  +GP+  +GP+ VK+F N   +M F       P+  + L+ +++     V ++YVKF
Sbjct: 184 SMKFQGPDNGQGPKYVKIFINLPRSMDFEEAERSEPTQALELTEDDIKEDGIVPLRYVKF 243

Query: 182 QNVRSLTIFIEDNQSGTDTTKIQKIALYGTTVETTDMKGLKKI 222
           QNV S+TIF++ NQ   +TT+I      GT V+ T+M   K++
Sbjct: 244 QNVNSVTIFVQSNQGEEETTRISYFTFIGTPVQATNMNDFKRV 281

[Close]

BLAST of Chy5G102310 vs. ExPASy Swiss-Prot
Match: Q8CDN6 (Thioredoxin-like protein 1 OS=Mus musculus OX=10090 GN=Txnl1 PE=1 SV=3)

HSP 1 Score: 119.0 bits (297), Expect = 6.8e-26
Identity = 66/163 (40.49%), Postives = 97/163 (59.51%), Query Frame = 0


Query: 62  VDLSDFINWSGVECLNQNFSHTFTNALNQTCRDNDSLLLESDADEQLLIYIPFNQVVKLH 121
           +DL  FIN +G ECLN++  H F N     C   D   LESD DEQLLI + FNQ VKL+
Sbjct: 124 MDLMPFINKAGCECLNESDEHGFDN-----CLRKDMSFLESDCDEQLLITVAFNQPVKLY 183

Query: 122 SLVIKGPEE-EGPRTVKLFSN-KENMGFGNVNDYPPSDTIVLSPENLTGKSEV-VKYVKF 181
           S+  +GP+  +GP+ VK+F N   +M F       P+  + L+ +++     V ++YVKF
Sbjct: 184 SMKFQGPDNGQGPKYVKIFINLPRSMDFEEAERSEPTQALELTEDDIKEDGIVPLRYVKF 243

Query: 182 QNVRSLTIFIEDNQSGTDTTKIQKIALYGTTVETTDMKGLKKI 222
           QNV S+T+F++ NQ   +TT+I      GT V+ T+M   K++
Sbjct: 244 QNVNSVTLFVQSNQGEEETTRISYFTFIGTPVQATNMNDFKRV 281

[Close]

BLAST of Chy5G102310 vs. ExPASy Swiss-Prot
Match: Q920J4 (Thioredoxin-like protein 1 OS=Rattus norvegicus OX=10116 GN=Txnl1 PE=1 SV=3)

HSP 1 Score: 118.6 bits (296), Expect = 8.9e-26
Identity = 66/163 (40.49%), Postives = 97/163 (59.51%), Query Frame = 0


Query: 62  VDLSDFINWSGVECLNQNFSHTFTNALNQTCRDNDSLLLESDADEQLLIYIPFNQVVKLH 121
           +DL  FIN +G ECLN++  H F N     C   D   LESD DEQLLI + FNQ VKL+
Sbjct: 124 MDLMPFINKAGCECLNESDEHGFDN-----CLRKDLSFLESDCDEQLLITVAFNQPVKLY 183

Query: 122 SLVIKGPEE-EGPRTVKLFSN-KENMGFGNVNDYPPSDTIVLSPENLTGKSEV-VKYVKF 181
           S+  +GP+  +GP+ VK+F N   +M F       P+  + L+ +++     V ++YVKF
Sbjct: 184 SMKFQGPDNGQGPKYVKIFINLPRSMDFEEAERSEPTQALELTEDDIKEDGIVPLRYVKF 243

Query: 182 QNVRSLTIFIEDNQSGTDTTKIQKIALYGTTVETTDMKGLKKI 222
           QNV S+T+F++ NQ   +TT+I      GT V+ T+M   K++
Sbjct: 244 QNVNSVTLFVQSNQGEEETTRISYFTFIGTPVQATNMNDFKRV 281

[Close]

BLAST of Chy5G102310 vs. ExPASy Swiss-Prot
Match: Q9USR1 (Thioredoxin-like protein 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=txl1 PE=4 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 1.0e-21
Identity = 66/177 (37.29%), Postives = 96/177 (54.24%), Query Frame = 0


Query: 58  SSPSVDLSDFINWSG------VECLNQNFSHTFTNALNQTCRDNDSLLLESDADEQLLIY 117
           SS S  +  F +  G      +ECLNQ   H   +A N     N S  LESD DEQL+IY
Sbjct: 117 SSSSAPVKGFASLQGCIENPQLECLNQQDDHDLKSAFN----SNPSSFLESDVDEQLMIY 176

Query: 118 IPFNQVVKLHSLVI---KGPEEEGPRTVKLFSNK-ENMGFGNVNDYPPSDTI--VLSPEN 177
           IPF +VVK+HS+ I   KG     P+T+KL+ N+  N+ F +   + P+  I  ++  ++
Sbjct: 177 IPFLEVVKVHSIAITPVKGETSSAPKTIKLYINQPNNLSFEDAESFTPTQVIEDIVYEQD 236

Query: 178 LTGKSEVVKYVKFQNVRSLTIFIEDNQSGTDTTKIQKIALYGTTVETTDMKGLKKIE 223
                  +++VKFQ V SL IFI  N    +TTKI ++ L+G  V  +    L+K+E
Sbjct: 237 DQPTIIPLRFVKFQRVNSLVIFIYSNVGEEETTKISRLELFGEPVGDSSKGKLQKVE 289

[Close]

BLAST of Chy5G102310 vs. ExPASy TrEMBL
Match: A0A0A0LIE3 (PITH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G011520 PE=4 SV=1)

HSP 1 Score: 331.3 bits (848), Expect = 3.2e-87
Identity = 163/163 (100.00%), Postives = 163/163 (100.00%), Query Frame = 0


Query: 62  VDLSDFINWSGVECLNQNFSHTFTNALNQTCRDNDSLLLESDADEQLLIYIPFNQVVKLH 121
           VDLSDFINWSGVECLNQNFSHTFTNALNQTCRDNDSLLLESDADEQLLIYIPFNQVVKLH
Sbjct: 23  VDLSDFINWSGVECLNQNFSHTFTNALNQTCRDNDSLLLESDADEQLLIYIPFNQVVKLH 82

Query: 122 SLVIKGPEEEGPRTVKLFSNKENMGFGNVNDYPPSDTIVLSPENLTGKSEVVKYVKFQNV 181
           SLVIKGPEEEGPRTVKLFSNKENMGFGNVNDYPPSDTIVLSPENLTGKSEVVKYVKFQNV
Sbjct: 83  SLVIKGPEEEGPRTVKLFSNKENMGFGNVNDYPPSDTIVLSPENLTGKSEVVKYVKFQNV 142

Query: 182 RSLTIFIEDNQSGTDTTKIQKIALYGTTVETTDMKGLKKIEDH 225
           RSLTIFIEDNQSGTDTTKIQKIALYGTTVETTDMKGLKKIEDH
Sbjct: 143 RSLTIFIEDNQSGTDTTKIQKIALYGTTVETTDMKGLKKIEDH 185

[Close]

BLAST of Chy5G102310 vs. ExPASy TrEMBL
Match: A0A5D3D4D2 (PITH domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456G001340 PE=4 SV=1)

HSP 1 Score: 328.2 bits (840), Expect = 2.7e-86
Identity = 161/163 (98.77%), Postives = 162/163 (99.39%), Query Frame = 0


Query: 62  VDLSDFINWSGVECLNQNFSHTFTNALNQTCRDNDSLLLESDADEQLLIYIPFNQVVKLH 121
           VDLSDFINWSGVECLNQNFSHTFTNALNQTCRDNDSLLLESDADEQLLIYIPFNQVVKLH
Sbjct: 14  VDLSDFINWSGVECLNQNFSHTFTNALNQTCRDNDSLLLESDADEQLLIYIPFNQVVKLH 73

Query: 122 SLVIKGPEEEGPRTVKLFSNKENMGFGNVNDYPPSDTIVLSPENLTGKSEVVKYVKFQNV 181
           SLVIKGPEEEGPRTVKLFSNKENMGFGNVNDYPPSDTIVLSP+NLTGK EVVKYVKFQNV
Sbjct: 74  SLVIKGPEEEGPRTVKLFSNKENMGFGNVNDYPPSDTIVLSPDNLTGKPEVVKYVKFQNV 133

Query: 182 RSLTIFIEDNQSGTDTTKIQKIALYGTTVETTDMKGLKKIEDH 225
           RSLTIFIEDNQSGTDTTKIQKIALYGTTVETTDMKGLKKIEDH
Sbjct: 134 RSLTIFIEDNQSGTDTTKIQKIALYGTTVETTDMKGLKKIEDH 176

[Close]

BLAST of Chy5G102310 vs. ExPASy TrEMBL
Match: A0A1S3C1X8 (PITH domain-containing protein At3g04780 OS=Cucumis melo OX=3656 GN=LOC103495923 PE=4 SV=1)

HSP 1 Score: 328.2 bits (840), Expect = 2.7e-86
Identity = 161/163 (98.77%), Postives = 162/163 (99.39%), Query Frame = 0


Query: 62  VDLSDFINWSGVECLNQNFSHTFTNALNQTCRDNDSLLLESDADEQLLIYIPFNQVVKLH 121
           VDLSDFINWSGVECLNQNFSHTFTNALNQTCRDNDSLLLESDADEQLLIYIPFNQVVKLH
Sbjct: 14  VDLSDFINWSGVECLNQNFSHTFTNALNQTCRDNDSLLLESDADEQLLIYIPFNQVVKLH 73

Query: 122 SLVIKGPEEEGPRTVKLFSNKENMGFGNVNDYPPSDTIVLSPENLTGKSEVVKYVKFQNV 181
           SLVIKGPEEEGPRTVKLFSNKENMGFGNVNDYPPSDTIVLSP+NLTGK EVVKYVKFQNV
Sbjct: 74  SLVIKGPEEEGPRTVKLFSNKENMGFGNVNDYPPSDTIVLSPDNLTGKPEVVKYVKFQNV 133

Query: 182 RSLTIFIEDNQSGTDTTKIQKIALYGTTVETTDMKGLKKIEDH 225
           RSLTIFIEDNQSGTDTTKIQKIALYGTTVETTDMKGLKKIEDH
Sbjct: 134 RSLTIFIEDNQSGTDTTKIQKIALYGTTVETTDMKGLKKIEDH 176

[Close]

BLAST of Chy5G102310 vs. ExPASy TrEMBL
Match: A0A6J1KJE4 (PITH domain-containing protein At3g04780-like OS=Cucurbita maxima OX=3661 GN=LOC111493734 PE=4 SV=1)

HSP 1 Score: 323.6 bits (828), Expect = 6.8e-85
Identity = 157/163 (96.32%), Postives = 160/163 (98.16%), Query Frame = 0


Query: 62  VDLSDFINWSGVECLNQNFSHTFTNALNQTCRDNDSLLLESDADEQLLIYIPFNQVVKLH 121
           VDLSDFINWSGVECLNQNFSHTFTNALNQTCRDNDSLLLESDADEQLLIYIPFNQV+KLH
Sbjct: 14  VDLSDFINWSGVECLNQNFSHTFTNALNQTCRDNDSLLLESDADEQLLIYIPFNQVIKLH 73

Query: 122 SLVIKGPEEEGPRTVKLFSNKENMGFGNVNDYPPSDTIVLSPENLTGKSEVVKYVKFQNV 181
           SLVIKGPEEEGPRTVKLFSNKENMGFGNVNDYPPSDTIVLSP+NLTGK EVVKYVKFQNV
Sbjct: 74  SLVIKGPEEEGPRTVKLFSNKENMGFGNVNDYPPSDTIVLSPDNLTGKPEVVKYVKFQNV 133

Query: 182 RSLTIFIEDNQSGTDTTKIQKIALYGTTVETTDMKGLKKIEDH 225
           RSLTIFIEDNQSG D TK+QKIALYGTTVETTDMKGLKKIEDH
Sbjct: 134 RSLTIFIEDNQSGADVTKVQKIALYGTTVETTDMKGLKKIEDH 176

[Close]

BLAST of Chy5G102310 vs. ExPASy TrEMBL
Match: A0A6J1G4V6 (PITH domain-containing protein At3g04780-like OS=Cucurbita moschata OX=3662 GN=LOC111450832 PE=4 SV=1)

HSP 1 Score: 323.6 bits (828), Expect = 6.8e-85
Identity = 157/163 (96.32%), Postives = 160/163 (98.16%), Query Frame = 0


Query: 62  VDLSDFINWSGVECLNQNFSHTFTNALNQTCRDNDSLLLESDADEQLLIYIPFNQVVKLH 121
           VDLSDFINWSGVECLNQNFSHTFTNALNQTCRDNDSLLLESDADEQLLIYIPFNQV+KLH
Sbjct: 14  VDLSDFINWSGVECLNQNFSHTFTNALNQTCRDNDSLLLESDADEQLLIYIPFNQVIKLH 73

Query: 122 SLVIKGPEEEGPRTVKLFSNKENMGFGNVNDYPPSDTIVLSPENLTGKSEVVKYVKFQNV 181
           SLVIKGPEEEGPRTVKLFSNKENMGFGNVNDYPPSDTIVLSP+NLTGK EVVKYVKFQNV
Sbjct: 74  SLVIKGPEEEGPRTVKLFSNKENMGFGNVNDYPPSDTIVLSPDNLTGKPEVVKYVKFQNV 133

Query: 182 RSLTIFIEDNQSGTDTTKIQKIALYGTTVETTDMKGLKKIEDH 225
           RSLTIFIEDNQSG D TK+QKIALYGTTVETTDMKGLKKIEDH
Sbjct: 134 RSLTIFIEDNQSGADVTKVQKIALYGTTVETTDMKGLKKIEDH 176

[Close]

BLAST of Chy5G102310 vs. NCBI nr
Match: XP_004139228.2 (PITH domain-containing protein At3g04780 [Cucumis sativus] >KGN60819.1 hypothetical protein Csa_019476 [Cucumis sativus])

HSP 1 Score: 328 bits (842), Expect = 4.64e-112
Identity = 163/163 (100.00%), Postives = 163/163 (100.00%), Query Frame = 0


Query: 62  VDLSDFINWSGVECLNQNFSHTFTNALNQTCRDNDSLLLESDADEQLLIYIPFNQVVKLH 121
           VDLSDFINWSGVECLNQNFSHTFTNALNQTCRDNDSLLLESDADEQLLIYIPFNQVVKLH
Sbjct: 23  VDLSDFINWSGVECLNQNFSHTFTNALNQTCRDNDSLLLESDADEQLLIYIPFNQVVKLH 82

Query: 122 SLVIKGPEEEGPRTVKLFSNKENMGFGNVNDYPPSDTIVLSPENLTGKSEVVKYVKFQNV 181
           SLVIKGPEEEGPRTVKLFSNKENMGFGNVNDYPPSDTIVLSPENLTGKSEVVKYVKFQNV
Sbjct: 83  SLVIKGPEEEGPRTVKLFSNKENMGFGNVNDYPPSDTIVLSPENLTGKSEVVKYVKFQNV 142

Query: 182 RSLTIFIEDNQSGTDTTKIQKIALYGTTVETTDMKGLKKIEDH 224
           RSLTIFIEDNQSGTDTTKIQKIALYGTTVETTDMKGLKKIEDH
Sbjct: 143 RSLTIFIEDNQSGTDTTKIQKIALYGTTVETTDMKGLKKIEDH 185

[Close]

BLAST of Chy5G102310 vs. NCBI nr
Match: XP_008455826.1 (PREDICTED: PITH domain-containing protein At3g04780 [Cucumis melo] >KAA0063617.1 PITH domain-containing protein [Cucumis melo var. makuwa] >TYK18409.1 PITH domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 325 bits (834), Expect = 5.61e-111
Identity = 161/163 (98.77%), Postives = 162/163 (99.39%), Query Frame = 0


Query: 62  VDLSDFINWSGVECLNQNFSHTFTNALNQTCRDNDSLLLESDADEQLLIYIPFNQVVKLH 121
           VDLSDFINWSGVECLNQNFSHTFTNALNQTCRDNDSLLLESDADEQLLIYIPFNQVVKLH
Sbjct: 14  VDLSDFINWSGVECLNQNFSHTFTNALNQTCRDNDSLLLESDADEQLLIYIPFNQVVKLH 73

Query: 122 SLVIKGPEEEGPRTVKLFSNKENMGFGNVNDYPPSDTIVLSPENLTGKSEVVKYVKFQNV 181
           SLVIKGPEEEGPRTVKLFSNKENMGFGNVNDYPPSDTIVLSP+NLTGK EVVKYVKFQNV
Sbjct: 74  SLVIKGPEEEGPRTVKLFSNKENMGFGNVNDYPPSDTIVLSPDNLTGKPEVVKYVKFQNV 133

Query: 182 RSLTIFIEDNQSGTDTTKIQKIALYGTTVETTDMKGLKKIEDH 224
           RSLTIFIEDNQSGTDTTKIQKIALYGTTVETTDMKGLKKIEDH
Sbjct: 134 RSLTIFIEDNQSGTDTTKIQKIALYGTTVETTDMKGLKKIEDH 176

[Close]

BLAST of Chy5G102310 vs. NCBI nr
Match: XP_038891254.1 (PITH domain-containing protein At3g04780 [Benincasa hispida])

HSP 1 Score: 323 bits (828), Expect = 4.60e-110
Identity = 159/163 (97.55%), Postives = 161/163 (98.77%), Query Frame = 0


Query: 62  VDLSDFINWSGVECLNQNFSHTFTNALNQTCRDNDSLLLESDADEQLLIYIPFNQVVKLH 121
           VDLSDFINWSGVECLNQNFSHTFTNALNQTCRDNDSLLLESDADEQLLIYIPFNQV+KLH
Sbjct: 14  VDLSDFINWSGVECLNQNFSHTFTNALNQTCRDNDSLLLESDADEQLLIYIPFNQVIKLH 73

Query: 122 SLVIKGPEEEGPRTVKLFSNKENMGFGNVNDYPPSDTIVLSPENLTGKSEVVKYVKFQNV 181
           SLVIKGPEEEGPRTVKLFSNKENMGFGNVNDYPPSDTIVLSP+NLTGK EVVKYVKFQNV
Sbjct: 74  SLVIKGPEEEGPRTVKLFSNKENMGFGNVNDYPPSDTIVLSPDNLTGKPEVVKYVKFQNV 133

Query: 182 RSLTIFIEDNQSGTDTTKIQKIALYGTTVETTDMKGLKKIEDH 224
           RSLTIFIEDNQSG DTTKIQKIALYGTTVETTDMKGLKKIEDH
Sbjct: 134 RSLTIFIEDNQSGADTTKIQKIALYGTTVETTDMKGLKKIEDH 176

[Close]

BLAST of Chy5G102310 vs. NCBI nr
Match: XP_022946891.1 (PITH domain-containing protein At3g04780-like [Cucurbita moschata] >XP_022946892.1 PITH domain-containing protein At3g04780-like [Cucurbita moschata] >XP_022946893.1 PITH domain-containing protein At3g04780-like [Cucurbita moschata] >XP_022999328.1 PITH domain-containing protein At3g04780-like [Cucurbita maxima] >XP_022999329.1 PITH domain-containing protein At3g04780-like [Cucurbita maxima] >XP_023521729.1 PITH domain-containing protein At3g04780-like [Cucurbita pepo subsp. pepo] >XP_023521946.1 PITH domain-containing protein At3g04780-like [Cucurbita pepo subsp. pepo] >XP_023545536.1 PITH domain-containing protein At3g04780-like [Cucurbita pepo subsp. pepo] >XP_023545537.1 PITH domain-containing protein At3g04780-like [Cucurbita pepo subsp. pepo] >XP_023545538.1 PITH domain-containing protein At3g04780-like [Cucurbita pepo subsp. pepo] >KAG6599300.1 PITH domain-containing protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7030300.1 PITH domain-containing protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 321 bits (822), Expect = 3.77e-109
Identity = 157/163 (96.32%), Postives = 160/163 (98.16%), Query Frame = 0


Query: 62  VDLSDFINWSGVECLNQNFSHTFTNALNQTCRDNDSLLLESDADEQLLIYIPFNQVVKLH 121
           VDLSDFINWSGVECLNQNFSHTFTNALNQTCRDNDSLLLESDADEQLLIYIPFNQV+KLH
Sbjct: 14  VDLSDFINWSGVECLNQNFSHTFTNALNQTCRDNDSLLLESDADEQLLIYIPFNQVIKLH 73

Query: 122 SLVIKGPEEEGPRTVKLFSNKENMGFGNVNDYPPSDTIVLSPENLTGKSEVVKYVKFQNV 181
           SLVIKGPEEEGPRTVKLFSNKENMGFGNVNDYPPSDTIVLSP+NLTGK EVVKYVKFQNV
Sbjct: 74  SLVIKGPEEEGPRTVKLFSNKENMGFGNVNDYPPSDTIVLSPDNLTGKPEVVKYVKFQNV 133

Query: 182 RSLTIFIEDNQSGTDTTKIQKIALYGTTVETTDMKGLKKIEDH 224
           RSLTIFIEDNQSG D TK+QKIALYGTTVETTDMKGLKKIEDH
Sbjct: 134 RSLTIFIEDNQSGADVTKVQKIALYGTTVETTDMKGLKKIEDH 176

[Close]

BLAST of Chy5G102310 vs. NCBI nr
Match: XP_022937687.1 (PITH domain-containing protein At3g04780-like [Cucurbita moschata] >XP_023521129.1 PITH domain-containing protein At3g04780-like [Cucurbita pepo subsp. pepo] >XP_023537940.1 PITH domain-containing protein At3g04780-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 318 bits (816), Expect = 3.10e-108
Identity = 154/163 (94.48%), Postives = 161/163 (98.77%), Query Frame = 0


Query: 62  VDLSDFINWSGVECLNQNFSHTFTNALNQTCRDNDSLLLESDADEQLLIYIPFNQVVKLH 121
           VDLSDFINWSG+ECLNQNFSHTFTNAL+QTCRDNDSLLLESDADEQ+L+YIPFNQV+KLH
Sbjct: 14  VDLSDFINWSGIECLNQNFSHTFTNALSQTCRDNDSLLLESDADEQILMYIPFNQVIKLH 73

Query: 122 SLVIKGPEEEGPRTVKLFSNKENMGFGNVNDYPPSDTIVLSPENLTGKSEVVKYVKFQNV 181
           SLVIKGPEEEGPRTVKLFSNKENMGFGNVNDYPPSDTIVLSP+NLTGK EVVKYVKFQNV
Sbjct: 74  SLVIKGPEEEGPRTVKLFSNKENMGFGNVNDYPPSDTIVLSPDNLTGKPEVVKYVKFQNV 133

Query: 182 RSLTIFIEDNQSGTDTTKIQKIALYGTTVETTDMKGLKKIEDH 224
           RSLTIFIEDNQSG DTTK+QKIALYGTTVETTDMKGLKKIEDH
Sbjct: 134 RSLTIFIEDNQSGADTTKVQKIALYGTTVETTDMKGLKKIEDH 176

[Close]

BLAST of Chy5G102310 vs. TAIR 10
Match: AT3G04780.1 (Protein of unknown function (DUF1000) )

HSP 1 Score: 255.4 bits (651), Expect = 4.3e-68
Identity = 125/163 (76.69%), Postives = 141/163 (86.50%), Query Frame = 0


Query: 62  VDLSDFINWSGVECLNQNFSHTFTNALNQTCRDNDSLLLESDADEQLLIYIPFNQVVKLH 121
           VDL DFI+WSGVECLNQ+ SH+  NAL Q  R+++ L LESDADEQLLIYIPFNQV+KLH
Sbjct: 14  VDLLDFIDWSGVECLNQSSSHSLPNALKQGYREDEGLNLESDADEQLLIYIPFNQVIKLH 73

Query: 122 SLVIKGPEEEGPRTVKLFSNKENMGFGNVNDYPPSDTIVLSPENLTGKSEVVKYVKFQNV 181
           S  IKGPEEEGP+TVK FSNKE+M F NVND+PPSDT  L+ ENL GK  V+KYVKFQNV
Sbjct: 74  SFAIKGPEEEGPKTVKFFSNKEHMCFSNVNDFPPSDTAELTEENLKGKPVVLKYVKFQNV 133

Query: 182 RSLTIFIEDNQSGTDTTKIQKIALYGTTVETTDMKGLKKIEDH 225
           RSLTIFIE NQSG++ TK+QKIALYG+TVETTDMKGLKKIEDH
Sbjct: 134 RSLTIFIEANQSGSEVTKVQKIALYGSTVETTDMKGLKKIEDH 176

[Close]

BLAST of Chy5G102310 vs. TAIR 10
Match: AT2G25950.1 (Protein of unknown function (DUF1000) )

HSP 1 Score: 63.9 bits (154), Expect = 1.9e-10
Identity = 47/154 (30.52%), Postives = 79/154 (51.30%), Query Frame = 0


Query: 68  INWSGVECLNQNFS---HTFTNALNQTCRDNDSLLLESDADEQLLIYIPFNQVVKLHSL- 127
           I+ S V  LN++ S    +   A  Q    +   L  ++ D +LL+++PF   VK+ S+ 
Sbjct: 24  IDLSKVSALNESVSGSAKSVFKAWEQRLHSSGEHLESNEGDPELLVFVPFTSDVKIKSIS 83

Query: 128 VIKGPEEEGPRTVKLFSNKENMGFGNVNDYPPSDTIVLSPENLTGKSEV-VKYVKFQNVR 187
           ++ GPE   P  +++F N+E + F +           L+ ENL G  E   +Y KFQ+V 
Sbjct: 84  IVGGPEGTSPSKLRVFINREGIDFSDAESMQAVQEWELA-ENLQGVLEYQTRYSKFQSVG 143

Query: 188 SLTIFIEDNQSGTDTTKIQKIALYGTTVETTDMK 217
           ++T+   ++  G DTT+I+ I   G   E T +K
Sbjct: 144 NITLHFPESFGG-DTTQIRYIGFKG---EATQLK 172

The following BLAST results are available for this feature:

BLAST of Chy5G102310 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SQZ9	6.1e-67	76.69	PITH domain-containing protein At3g04780 OS=Arabidopsis thaliana OX=3702 GN=At3g...	[more]
O43396	1.8e-26	41.10	Thioredoxin-like protein 1 OS=Homo sapiens OX=9606 GN=TXNL1 PE=1 SV=3	[more]
Q8CDN6	6.8e-26	40.49	Thioredoxin-like protein 1 OS=Mus musculus OX=10090 GN=Txnl1 PE=1 SV=3	[more]
Q920J4	8.9e-26	40.49	Thioredoxin-like protein 1 OS=Rattus norvegicus OX=10116 GN=Txnl1 PE=1 SV=3	[more]
Q9USR1	1.0e-21	37.29	Thioredoxin-like protein 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843...	[more]

BLAST of Chy5G102310 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LIE3	3.2e-87	100.00	PITH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G011520 PE=4 S...	[more]
A0A5D3D4D2	2.7e-86	98.77	PITH domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A1S3C1X8	2.7e-86	98.77	PITH domain-containing protein At3g04780 OS=Cucumis melo OX=3656 GN=LOC103495923...	[more]
A0A6J1KJE4	6.8e-85	96.32	PITH domain-containing protein At3g04780-like OS=Cucurbita maxima OX=3661 GN=LOC...	[more]
A0A6J1G4V6	6.8e-85	96.32	PITH domain-containing protein At3g04780-like OS=Cucurbita moschata OX=3662 GN=L...	[more]

BLAST of Chy5G102310 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004139228.2	4.64e-112	100.00	PITH domain-containing protein At3g04780 [Cucumis sativus] >KGN60819.1 hypotheti...	[more]
XP_008455826.1	5.61e-111	98.77	PREDICTED: PITH domain-containing protein At3g04780 [Cucumis melo] >KAA0063617.1...	[more]
XP_038891254.1	4.60e-110	97.55	PITH domain-containing protein At3g04780 [Benincasa hispida]	[more]
XP_022946891.1	3.77e-109	96.32	PITH domain-containing protein At3g04780-like [Cucurbita moschata] >XP_022946892...	[more]
XP_022937687.1	3.10e-108	94.48	PITH domain-containing protein At3g04780-like [Cucurbita moschata] >XP_023521129...	[more]

BLAST of Chy5G102310 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G04780.1	4.3e-68	76.69	Protein of unknown function (DUF1000)	[more]
AT2G25950.1	1.9e-10	30.52	Protein of unknown function (DUF1000)	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010400	PITH domain	PFAM	PF06201	PITH	coord: 64..208 e-value: 2.5E-39 score: 134.9
IPR010400	PITH domain	PROSITE	PS51532	PITH	coord: 53..224 score: 51.663437
IPR037047	PITH domain superfamily	GENE3D	2.60.120.470	PITH domain	coord: 57..224 e-value: 3.9E-54 score: 184.8
IPR045099	PITH domain-containing protein 1-like	PANTHER	PTHR12175	AD039 HT014 THIOREDOXIN FAMILY TRP26	coord: 60..224
None	No IPR available	PANTHER	PTHR12175:SF5	THIOREDOXIN LIKE 1	coord: 60..224
IPR008979	Galactose-binding-like domain superfamily	SUPERFAMILY	49785	Galactose-binding domain-like	coord: 60..208

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy5G102310.1	Chy5G102310.1	mRNA